Pregenerated sensors for RHEBL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023755Ensembl transcript IDs: ENSMUST00000024518.11, ENSMUST00000229348.2, ENSMUST00000229508.2, ENSMUST00000229556.2, ENSMUST00000229876.2
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTTACCCAACCAACACCCAAAACCTACCCAGGAGGGTGGGTCCTaGGTAATCAATGCACAAGACTCATATCCCTACTGTACAGACTGT | + |
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Preference number: 1 (lower is better) Translates to: PLPNQHPKPTQEGGS*VINAQDSYPYCTDC Trigger: ACAGTCTGTACAGTAGGGATATGAGTCTTGTGCATTGATTACCCAGGACCCACCCTCCTGGGTAGGTTTTGGGTGTTGGTTGGGTAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| 3UTR CCA 90 bp | ACATCTTGCCCCTTTGTAAACATTAACATCCAGGCTACCAGAACCTaGGATGAGTGTGCAAAAATAAGAGTGCCATACTGTGTGCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: TSCPFVNINIQATRT*DECAKIRVPYCVPR Trigger: TCTGGGCACACAGTATGGCACTCTTATTTTTGCACACTCATCCCAGGTTCTGGTAGCCTGGATGTTAATGTTTACAAAGGGGCAAGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| 3UTR GCA 90 bp | TGGAAATATACATTGTTACCCCAGCAGACAGTTCTACTTCAGAACTaGCAAGGAACCAAACACCCTTACCCAACCAACACCCAAAACCTA | + |
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Preference number: 1 (lower is better) Translates to: WKYTLLPQQTVLLQN*QGTKHPYPTNTQNL Trigger: TAGGTTTTGGGTGTTGGTTGGGTAAGGGTGTTTGGTTCCTTGGCAGTTCTGAAGTAGAACTGTCTGCTGGGGTAACAATGTATATTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTACCCAGGAGGGTGGGTCCTGGGTAATCAATGCACAAGACTCATATCCCTAGAGTGCCATACTGTGTaGCCAGAGGACAGGGGACAT | + |
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Preference number: 2 (lower is better) Translates to: TYPGGWVLGNQCTRLISLECHTV*PEDRGH Trigger: ATGTCCCCTGTCCTCTGGGCACACAGTATGGCACTC...TAGGGATATGAGTCTTGTGCATTGATTACCCAGGACCCACCCTCCTGGGTAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGTCCCTGAGACATCTTGCCCCTTTGTAAACATTAACATCCAGGCTACCAGAATAGCAGTTATATCCTaGGGGTCTGCCCCACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: RVPETSCPFVNINIQATRIAVIS*GSAPLL Trigger: CAGCAGTGGGGCAGACCCTCAGGATATAACTGCTAT...TCTGGTAGCCTGGATGTTAATGTTTACAAAGGGGCAAGATGTCTCAGGGACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGCAGACAGTTCTACTTCAGAACTGCCAAGGAACCAAACACCCTTACCCAACGGGTTAGACAATGTCTaGGGCAGAAACAGGGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: PADSSTSELPRNQTPLPNGLDNV*GRNRAV Trigger: AACTGCCCTGTTTCTGCCGCAGACATTGTCTAACCC...GTTGGGTAAGGGTGTTTGGTTCCTTGGCAGTTCTGAAGTAGAACTGTCTGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| 3UTR CAA 90 bp | CAGTTATTCCATGCCAAGAGTTCACATAAGATAGCATCGGCGGTCTaGTCGTCCATAAGAATTCTCCACCCGGGCAATCTCCTGGATGAC | + |
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Preference number: 2 (lower is better) Translates to: QLFHAKSSHKIASAV*SSIRILHPGNLLDD Trigger: GTCATCCAGGAGATTGCCCGGGTGGAGAATTCTTATGGACGACAAGACCGCCGATGCTATCTTATGTGAACTCTTGGCATGGAATAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| 3UTR-3UTR GCA 90 bp | ATATACATTGTTACCCCAGCAGACAGTTCTACTTCAGAACTGCCAAGGAACCAAGAGTGCCATACTGTGTaGCCAGAGGACAGGGGACAT | + |
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Preference number: 2 (lower is better) Translates to: IYIVTPADSSTSELPRNQECHTV*PEDRGH Trigger: ATGTCCCCTGTCCTCTGGGCACACAGTATGGCACTC...TTGGTTCCTTGGCAGTTCTGAAGTAGAACTGTCTGCTGGGGTAACAATGTATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| 3UTR-3UTR GCA 90 bp | GTAAACATTAACATCCAGGCTACCAGAACCTGGGATGAGTGTGCAAAAATAAGAGGGTTAGACAATGTCTaGGGCAGAAACAGGGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: VNINIQATRTWDECAKIRGLDNV*GRNRAV Trigger: AACTGCCCTGTTTCTGCCGCAGACATTGTCTAACCC...TCTTATTTTTGCACACTCATCCCAGGTTCTGGTAGCCTGGATGTTAATGTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| 3UTR-3UTR GCA 90 bp | ATATACATTGTTACCCCAGCAGACAGTTCTACTTCAGAACTGCCAAGGAACCAAGTCCTGGGTAATCAATaGACAAGACTCATATCCCTA | + |
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Preference number: 2 (lower is better) Translates to: IYIVTPADSSTSELPRNQVLGNQ*TRLISL Trigger: TAGGGATATGAGTCTTGTGCATTGATTACCCAGGAC...TTGGTTCCTTGGCAGTTCTGAAGTAGAACTGTCTGCTGGGGTAACAATGTATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| 3UTR CCA 72 bp | AACCAACACCCAAAACCTACCCAGGAGGGTGGGTCCTaGGTAATCAATGCACAAGACTCATATCCCTACTGT | + |
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Preference number: 3 (lower is better) Translates to: NQHPKPTQEGGS*VINAQDSYPYC Trigger: ACAGTAGGGATATGAGTCTTGTGCATTGATTACCCAGGACCCACCCTCCTGGGTAGGTTTTGGGTGTTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| 3UTR GCA 72 bp | ACCAAGGAGTTAGAAGCCAGGGTCCCTGAGACATCTTaGCCCTTTGTAAACATTAACATCCAGGCTACCAGA | + |
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Preference number: 3 (lower is better) Translates to: TKELEARVPETS*PFVNINIQATR Trigger: TCTGGTAGCCTGGATGTTAATGTTTACAAAGGGGCAAGATGTCTCAGGGACCCTGGCTTCTAACTCCTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| 3UTR CCA 72 bp | CCCTTTGTAAACATTAACATCCAGGCTACCAGAACCTaGGATGAGTGTGCAAAAATAAGAGTGCCATACTGT | + |
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Preference number: 3 (lower is better) Translates to: PFVNINIQATRT*DECAKIRVPYC Trigger: ACAGTATGGCACTCTTATTTTTGCACACTCATCCCAGGTTCTGGTAGCCTGGATGTTAATGTTTACAAAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR CCA 90 bp | ATAGTTGGCAACCATAGCAGTTATATCCTGAGGGTCTGCCCCACTGCTGCGGGTAGCGGTACCCTAGGATaGCCACCTTCCTGTAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: IVGNHSSYILRVCPTAAGSGTLG*PPSCSA Trigger: TGCGCTACAGGAAGGTGGCCATCCTAGGGTACCGCT...ACCCGCAGCAGTGGGGCAGACCCTCAGGATATAACTGCTATGGTTGCCAACTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR CCA 90 bp | GCGGTCTTGTCGTCCATAAGAATTCTCCACCCGGGCAATCTCCTGGATGACTTTAGCGGTACCCTAGGATaGCCACCTTCCTGTAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: AVLSSIRILHPGNLLDDFSGTLG*PPSCSA Trigger: TGCGCTACAGGAAGGTGGCCATCCTAGGGTACCGCT...AAAGTCATCCAGGAGATTGCCCGGGTGGAGAATTCTTATGGACGACAAGACCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS-3UTR GCA 90 bp | GATAGCATCGGCGGTCTTGTCGTCCATAAGAATTCTCCACCCGGGCAATCTCCTTTCCCTTCAACTGCCTaGACCTCTCTGGAAGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: DSIGGLVVHKNSPPGQSPFPSTA*TSLEAD Trigger: ATCTGCTTCCAGAGAGGTGCAGGCAGTTGAAGGGAA...AGGAGATTGCCCGGGTGGAGAATTCTTATGGACGACAAGACCGCCGATGCTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS-3UTR CCA 90 bp | ACCCAGGAGGGTGGGTCCTGGGTAATCAATGCACAAGACTCATATCCCTACTGTAGCCGGGTTTTACCGTaGCCTTCGTGTAGCTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: TQEGGSWVINAQDSYPYCSRVLP*PSCSFW Trigger: CCAAAAGCTACACGAAGGCCACGGTAAAACCCGGCT...ACAGTAGGGATATGAGTCTTGTGCATTGATTACCCAGGACCCACCCTCCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR GCA 90 bp | CCAGCAGACAGTTCTACTTCAGAACTGCCAAGGAACCAAACACCCTTACCCAACCTCAGGAGAGAGATCTaGCTTGTTCCCCACAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PADSSTSELPRNQTPLPNLRREI*LVPHKQ Trigger: CTGCTTGTGGGGAACAAGGCAGATCTCTCTCCTGAG...GTTGGGTAAGGGTGTTTGGTTCCTTGGCAGTTCTGAAGTAGAACTGTCTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR GCA 90 bp | AATAAGAGTGCCATACTGTGTGCCCAGAGGACAGGGGACATAGTTGGCAACCATCTCAGGAGAGAGATCTaGCTTGTTCCCCACAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: NKSAILCAQRTGDIVGNHLRREI*LVPHKQ Trigger: CTGCTTGTGGGGAACAAGGCAGATCTCTCTCCTGAG...ATGGTTGCCAACTATGTCCCCTGTCCTCTGGGCACACAGTATGGCACTCTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR CCA 90 bp | TCACATAAGATAGCATCGGCGGTCTTGTCGTCCATAAGAATTCTCCACCCGGGCCTGCCTGCACCTCTCTaGAAGCAGATTTGGAACACA | + |
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Preference number: 4 (lower is better) Translates to: SHKIASAVLSSIRILHPGLPAPL*KQIWNT Trigger: TGTGTTCCAAATCTGCTTCCAGAGAGGTGCAGGCAG...GCCCGGGTGGAGAATTCTTATGGACGACAAGACCGCCGATGCTATCTTATGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS-3UTR TCA 90 bp | GATAGCATCGGCGGTCTTGTCGTCCATAAGAATTCTCCACCCGGGCAATCTCCTTCGCCTTCCACAAATTaGTGTGCCAAAGATGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: DSIGGLVVHKNSPPGQSPSPSTN*CAKDVF Trigger: GAAGACATCTTTGGCACATCAATTTGTGGAAGGCGA...AGGAGATTGCCCGGGTGGAGAATTCTTATGGACGACAAGACCGCCGATGCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS-3UTR TCA 90 bp | GGGGACATAGTTGGCAACCATAGCAGTTATATCCTGAGGGTCTGCCCCACTGCTTCCACCAGATGTAGGTaGAACTCATCTTTGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: GDIVGNHSSYILRVCPTASTRCR*NSSLPR Trigger: TCTTGGCAAAGATGAGTTTCACCTACATCTGGTGGA...AGCAGTGGGGCAGACCCTCAGGATATAACTGCTATGGTTGCCAACTATGTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR GCA 90 bp | ACAGGGCAGTTATTCCATGCCAAGAGTTCACATAAGATAGCATCGGCGGTCTTGCTCAGGAGAGAGATCTaGCTTGTTCCCCACAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TGQLFHAKSSHKIASAVLLRREI*LVPHKQ Trigger: CTGCTTGTGGGGAACAAGGCAGATCTCTCTCCTGAG...CAAGACCGCCGATGCTATCTTATGTGAACTCTTGGCATGGAATAACTGCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS-3UTR GCA 90 bp | ATTGTTACCCCAGCAGACAGTTCTACTTCAGAACTGCCAAGGAACCAAACACCCTTCCCTTCAACTGCCTaGACCTCTCTCTCAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: IVTPADSSTSELPRNQTPFPSTA*TSLSGE Trigger: CTCTCCTGAGAGAGAGGTGCAGGCAGTTGAAGGGAA...GGGTGTTTGGTTCCTTGGCAGTTCTGAAGTAGAACTGTCTGCTGGGGTAACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR CCA 90 bp | ATTGTTACCCCAGCAGACAGTTCTACTTCAGAACTGCCAAGGAACCAAACACCCAGCCGGGTTTTACCGTaGCCTTCGTGTAGCTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: IVTPADSSTSELPRNQTPSRVLP*PSCSFW Trigger: CCAAAAGCTACACGAAGGCCACGGTAAAACCCGGCT...GGGTGTTTGGTTCCTTGGCAGTTCTGAAGTAGAACTGTCTGCTGGGGTAACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR CCA 90 bp | CCCCAGCAGACAGTTCTACTTCAGAACTGCCAAGGAACCAAACACCCTTACCCAACCCGGGCAATCTCCTaGATGACTTTGATGAAGACA | + |
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Preference number: 4 (lower is better) Translates to: PQQTVLLQNCQGTKHPYPTRAIS*MTLMKT Trigger: TGTCTTCATCAAAGTCATCCAGGAGATTGCCCGGGT...TGGGTAAGGGTGTTTGGTTCCTTGGCAGTTCTGAAGTAGAACTGTCTGCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR CCA 90 bp | ACATCTTGCCCCTTTGTAAACATTAACATCCAGGCTACCAGAACCTGGGATGAGGTACTCATCCGCAACTaGTACCTGCCCTGCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: TSCPFVNINIQATRTWDEVLIRN*YLPCCV Trigger: GACACAGCAGGGCAGGTACCAGTTGCGGATGAGTAC...CTCATCCCAGGTTCTGGTAGCCTGGATGTTAATGTTTACAAAGGGGCAAGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229348.2 |
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| 3UTR CAA 72 bp | CATGCCAAGAGTTCACATAAGATAGCATCGGCGGTCTaGTCGTCCATAAGAATTCTCCACCCGGGCAATCTC | + |
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Preference number: 4 (lower is better) Translates to: HAKSSHKIASAV*SSIRILHPGNL Trigger: GAGATTGCCCGGGTGGAGAATTCTTATGGACGACAAGACCGCCGATGCTATCTTATGTGAACTCTTGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS-3UTR GCA 90 bp | TCGGCGGTCTTGTCGTCCATAAGAATTCTCCACCCGGGCAATCTCCTGGATGACTTCCACAAATTGATGTaGCAAAGATGTCTTCCCTAC | + |
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Preference number: 4 (lower is better) Translates to: SAVLSSIRILHPGNLLDDFHKLM*QRCLPY Trigger: GTAGGGAAGACATCTTTGGCACATCAATTTGTGGAA...GTCATCCAGGAGATTGCCCGGGTGGAGAATTCTTATGGACGACAAGACCGCCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS-3UTR GCA 90 bp | CCCCAGCAGACAGTTCTACTTCAGAACTGCCAAGGAACCAAACACCCTTACCCAGGTGAAACTCATCTTTaGCAAGAGTCACTGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PQQTVLLQNCQGTKHPYPGETHL*QESLSC Trigger: GCAAGACAGTGACTCTTGGCAAAGATGAGTTTCACC...TGGGTAAGGGTGTTTGGTTCCTTGGCAGTTCTGAAGTAGAACTGTCTGCTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR CCA 90 bp | TGGAAATATACATTGTTACCCCAGCAGACAGTTCTACTTCAGAACTGCCAAGGAAGCGGTACCCTAGGATaGCCACCTTCCTGTAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: WKYTLLPQQTVLLQNCQGSGTLG*PPSCSA Trigger: TGCGCTACAGGAAGGTGGCCATCCTAGGGTACCGCT...TCCTTGGCAGTTCTGAAGTAGAACTGTCTGCTGGGGTAACAATGTATATTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR CCA 90 bp | ATTGTTACCCCAGCAGACAGTTCTACTTCAGAACTGCCAAGGAACCAAACACCCACCCGGGCAATCTCCTaGATGACTTTGATGAAGACA | + |
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Preference number: 4 (lower is better) Translates to: IVTPADSSTSELPRNQTPTRAIS*MTLMKT Trigger: TGTCTTCATCAAAGTCATCCAGGAGATTGCCCGGGT...GGGTGTTTGGTTCCTTGGCAGTTCTGAAGTAGAACTGTCTGCTGGGGTAACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR CCA 90 bp | AAGATAGCATCGGCGGTCTTGTCGTCCATAAGAATTCTCCACCCGGGCAATCTCCTCTGGAAGCAGATTTaGAACACACCAAGATGGAAA | + |
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Preference number: 4 (lower is better) Translates to: KIASAVLSSIRILHPGNLLWKQI*NTPRWK Trigger: TTTCCATCTTGGTGTGTTCCAAATCTGCTTCCAGAG...GAGATTGCCCGGGTGGAGAATTCTTATGGACGACAAGACCGCCGATGCTATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS-3UTR TCA 90 bp | AGGGTCCCTGAGACATCTTGCCCCTTTGTAAACATTAACATCCAGGCTACCAGATCGCCTTCCACAAATTaGTGTGCCAAAGATGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RVPETSCPFVNINIQATRSPSTN*CAKDVF Trigger: GAAGACATCTTTGGCACATCAATTTGTGGAAGGCGA...TCTGGTAGCCTGGATGTTAATGTTTACAAAGGGGCAAGATGTCTCAGGGACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR TCA 90 bp | AGGGTCCCTGAGACATCTTGCCCCTTTGTAAACATTAACATCCAGGCTACCAGATCCACCAGATGTAGGTaGAACTCATCTTTGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: RVPETSCPFVNINIQATRSTRCR*NSSLPR Trigger: TCTTGGCAAAGATGAGTTTCACCTACATCTGGTGGA...TCTGGTAGCCTGGATGTTAATGTTTACAAAGGGGCAAGATGTCTCAGGGACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR GCA 90 bp | ACCCAGGAGGGTGGGTCCTGGGTAATCAATGCACAAGACTCATATCCCTACTGTTTCCACAAATTGATGTaGCAAAGATGTCTTCCCTAC | + |
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Preference number: 4 (lower is better) Translates to: TQEGGSWVINAQDSYPYCFHKLM*QRCLPY Trigger: GTAGGGAAGACATCTTTGGCACATCAATTTGTGGAA...ACAGTAGGGATATGAGTCTTGTGCATTGATTACCCAGGACCCACCCTCCTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR GCA 90 bp | AAATATACATTGTTACCCCAGCAGACAGTTCTACTTCAGAACTGCCAAGGAACCTTCCCTTCAACTGCCTaGACCTCTCTCTCAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: KYTLLPQQTVLLQNCQGTFPSTA*TSLSGE Trigger: CTCTCCTGAGAGAGAGGTGCAGGCAGTTGAAGGGAA...GGTTCCTTGGCAGTTCTGAAGTAGAACTGTCTGCTGGGGTAACAATGTATATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR GCA 90 bp | TGGGTAATCAATGCACAAGACTCATATCCCTACTGTACAGACTGTAAAAATTGGTCCGCAACTGGTACCTaGCCTGCTGTGTCCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: WVINAQDSYPYCTDCKNWSATGT*PAVSTR Trigger: TCTGGTGGACACAGCAGGGCAGGTACCAGTTGCGGA...CCAATTTTTACAGTCTGTACAGTAGGGATATGAGTCTTGTGCATTGATTACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229348.2 |
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| CDS-3UTR CCA 90 bp | ACAGGGCAGTTATTCCATGCCAAGAGTTCACATAAGATAGCATCGGCGGTCTTGTGGAACACACCAAGATaGAAAGCAGATAGCAACGTC | + |
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Preference number: 4 (lower is better) Translates to: TGQLFHAKSSHKIASAVLWNTPR*KADSNV Trigger: GACGTTGCTATCTGCTTTCCATCTTGGTGTGTTCCA...CAAGACCGCCGATGCTATCTTATGTGAACTCTTGGCATGGAATAACTGCCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS-3UTR GCA 90 bp | ACATCTTGCCCCTTTGTAAACATTAACATCCAGGCTACCAGAACCTGGGATGAGGGTGAAACTCATCTTTaGCAAGAGTCACTGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: TSCPFVNINIQATRTWDEGETHL*QESLSC Trigger: GCAAGACAGTGACTCTTGGCAAAGATGAGTTTCACC...CTCATCCCAGGTTCTGGTAGCCTGGATGTTAATGTTTACAAAGGGGCAAGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR GCA 90 bp | TTTGGAAATATACATTGTTACCCCAGCAGACAGTTCTACTTCAGAACTGCCAAGGCGAGTAGGGCAGAATaGTGTACTCATCCGCAACTG | + |
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Preference number: 4 (lower is better) Translates to: FGNIHCYPSRQFYFRTAKASRAE*CTHPQL Trigger: CAGTTGCGGATGAGTACAGCATTCTGCCCTACTCGC...CTTGGCAGTTCTGAAGTAGAACTGTCTGCTGGGGTAACAATGTATATTTCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229348.2 |
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| CDS-3UTR TCA 90 bp | TTATTCCATGCCAAGAGTTCACATAAGATAGCATCGGCGGTCTTGTCGTCCATATCCACCAGATGTAGGTaGAACTCATCTTTGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: LFHAKSSHKIASAVLSSISTRCR*NSSLPR Trigger: TCTTGGCAAAGATGAGTTTCACCTACATCTGGTGGA...TATGGACGACAAGACCGCCGATGCTATCTTATGTGAACTCTTGGCATGGAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS-3UTR GCA 90 bp | AGTTCTACTTCAGAACTGCCAAGGAACCAAACACCCTTACCCAACCAACACCCATTCCACAAATTGATGTaGCAAAGATGTCTTCCCTAC | + |
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Preference number: 4 (lower is better) Translates to: SSTSELPRNQTPLPNQHPFHKLM*QRCLPY Trigger: GTAGGGAAGACATCTTTGGCACATCAATTTGTGGAA...TGGGTGTTGGTTGGGTAAGGGTGTTTGGTTCCTTGGCAGTTCTGAAGTAGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS GCA 90 bp | AAAGCAGATAGCAACGTCGGCAAGTTCTCTCTCAGGAGAGAGATCTaGCTTGTTCCCCACAAGCAGCACCGACAGCCGGGTTTTACCGTG | + |
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Preference number: 5 (lower is better) Translates to: KADSNVGKFSLRREI*LVPHKQHRQPGFTV Trigger: CACGGTAAAACCCGGCTGTCGGTGCTGCTTGTGGGGAACAAGGCAGATCTCTCTCCTGAGAGAGAACTTGCCGACGTTGCTATCTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS-3UTR CAA 90 bp | GGGTGGGTCCTGGGTAATCAATGCACAAGACTCATATCCCTACTGTACAGACTGGGAGAGAGATCTGCCTaGTTCCCCACAAGCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: GWVLGNQCTRLISLLYRLGERSA*FPTSST Trigger: GGTGCTGCTTGTGGGGAACAAGGCAGATCTCTCTCC...CAGTCTGTACAGTAGGGATATGAGTCTTGTGCATTGATTACCCAGGACCCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR CAA 90 bp | ATTGTTACCCCAGCAGACAGTTCTACTTCAGAACTGCCAAGGAACCAAACACCCGGAGAGAGATCTGCCTaGTTCCCCACAAGCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: IVTPADSSTSELPRNQTPGERSA*FPTSST Trigger: GGTGCTGCTTGTGGGGAACAAGGCAGATCTCTCTCC...GGGTGTTTGGTTCCTTGGCAGTTCTGAAGTAGAACTGTCTGCTGGGGTAACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS CCA 90 bp | CAACTGCCTGCACCTCTCTGGAAGCAGATTTGGAACACACCAAGATaGAAAGCAGATAGCAACGTCGGCAAGTTCTCTCTCAGGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: QLPAPLWKQIWNTPR*KADSNVGKFSLRRE Trigger: CTCTCTCCTGAGAGAGAACTTGCCGACGTTGCTATCTGCTTTCCATCTTGGTGTGTTCCAAATCTGCTTCCAGAGAGGTGCAGGCAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS-3UTR CAA 90 bp | CCCAAAACCTACCCAGGAGGGTGGGTCCTGGGTAATCAATGCACAAGACTCATACTCGCCTTCCACAAATaGATGTGCCAAAGATGTCTT | + |
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Preference number: 5 (lower is better) Translates to: PKTYPGGWVLGNQCTRLILAFHK*MCQRCL Trigger: AAGACATCTTTGGCACATCAATTTGTGGAAGGCGAG...TATGAGTCTTGTGCATTGATTACCCAGGACCCACCCTCCTGGGTAGGTTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS-3UTR CAA 90 bp | ACAGGGCAGTTATTCCATGCCAAGAGTTCACATAAGATAGCATCGGCGGTCTTGCTCGCCTTCCACAAATaGATGTGCCAAAGATGTCTT | + |
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Preference number: 5 (lower is better) Translates to: TGQLFHAKSSHKIASAVLLAFHK*MCQRCL Trigger: AAGACATCTTTGGCACATCAATTTGTGGAAGGCGAG...CAAGACCGCCGATGCTATCTTATGTGAACTCTTGGCATGGAATAACTGCCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS-3UTR CAA 90 bp | GTAAACATTAACATCCAGGCTACCAGAACCTGGGATGAGTGTGCAAAAATAAGACTCGCCTTCCACAAATaGATGTGCCAAAGATGTCTT | + |
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Preference number: 5 (lower is better) Translates to: VNINIQATRTWDECAKIRLAFHK*MCQRCL Trigger: AAGACATCTTTGGCACATCAATTTGTGGAAGGCGAG...TCTTATTTTTGCACACTCATCCCAGGTTCTGGTAGCCTGGATGTTAATGTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 |
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| CDS GCA 72 bp | TTCAACTGCCTGCACCTCTCTCTCAGGAGAGAGATCTaGCTTGTTCCCCACAAGCAGCACCGACAGCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: FNCLHLSLRREI*LVPHKQHRQPG Trigger: ACCCGGCTGTCGGTGCTGCTTGTGGGGAACAAGGCAGATCTCTCTCCTGAGAGAGAGGTGCAGGCAGTTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 ENSMUST00000229508.2 ENSMUST00000229556.2 |
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| CDS GCA 72 bp | AGCAACGTCGGCAAGTTCTCTCTCAGGAGAGAGATCTaGCTTGTTCCCCACAAGCAGCACCGACAGCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: SNVGKFSLRREI*LVPHKQHRQPG Trigger: ACCCGGCTGTCGGTGCTGCTTGTGGGGAACAAGGCAGATCTCTCTCCTGAGAGAGAACTTGCCGACGTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS CAA 90 bp | CAGATAGCAACGTCGGCAAGTTCTCTCTCAGGAGAGAGATCTGCCTaGTTCCCCACAAGCAGCACCGACAGCCGGGTTTTACCGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: QIATSASSLSGERSA*FPTSSTDSRVLPWP Trigger: AGGCCACGGTAAAACCCGGCTGTCGGTGCTGCTTGTGGGGAACAAGGCAGATCTCTCTCCTGAGAGAGAACTTGCCGACGTTGCTATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS CAA 72 bp | ACGTCGGCAAGTTCTCTCTCAGGAGAGAGATCTGCCTaGTTCCCCACAAGCAGCACCGACAGCCGGGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: TSASSLSGERSA*FPTSSTDSRVL Trigger: TAAAACCCGGCTGTCGGTGCTGCTTGTGGGGAACAAGGCAGATCTCTCTCCTGAGAGAGAACTTGCCGACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229876.2 |
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| CDS TCA 72 bp | ACTGGTACCTGCCCTGCTGTGTCCACCAGATGTAGGTaGAACTCATCTTTGCCAAGAGTCACTGTCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TGTCPAVSTRCR*NSSLPRVTVLL Trigger: CAGCAAGACAGTGACTCTTGGCAAAGATGAGTTTCACCTACATCTGGTGGACACAGCAGGGCAGGTACCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229348.2 |
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| CDS CAA 72 bp | AGGATCGTAGCCTTCCAGGAACTCGCCTTCCACAAATaGATGTGCCAAAGATGTCTTCCCTACGGAGCGGTA | + |
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Preference number: 6 (lower is better) Translates to: RIVAFQELAFHK*MCQRCLPYGAV Trigger: TACCGCTCCGTAGGGAAGACATCTTTGGCACATCAATTTGTGGAAGGCGAGTTCCTGGAAGGCTACGATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 ENSMUST00000229508.2 ENSMUST00000229556.2 ENSMUST00000229876.2 |
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| CDS TCA 72 bp | CCTTCGTGTAGCTTTTGGTACAGGTTCTTAACGATCTaGAAGCTGCGCAGAGAGTTAACCGAGTATACAAGA | + |
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Preference number: 6 (lower is better) Translates to: PSCSFWYRFLTI*KLRRELTEYTR Trigger: TCTTGTATACTCGGTTAACTCTCTGCGCAGCTTTCAGATCGTTAAGAACCTGTACCAAAAGCTACACGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024518.11 ENSMUST00000229348.2 ENSMUST00000229508.2 ENSMUST00000229556.2 ENSMUST00000229876.2 |
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