Pregenerated sensors for RHBG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000104445Ensembl transcript IDs: ENSMUST00000171887.4
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGAGCTGGCTTGGGTGACACTGGAACAGAGTAACACTGGTCAATaGGGTGGCAGTCACCTAGGCTGGCTTTGGCCTTTTCTGGCCACA | + |
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Preference number: 1 (lower is better) Translates to: VELAWVTLEQSNTGQ*GGSHLGWLWPFLAT Trigger: TGTGGCCAGAAAAGGCCAAAGCCAGCCTAGGTGACTGCCACCCCATTGACCAGTGTTACTCTGTTCCAGTGTCACCCAAGCCAGCTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR TCA 90 bp | ATTGTTTATCACCCAGCTTCCCACCCAGAGTGGAGCTGGCTTGGGTaGCACTGGAACAGAGTAACACTGGTCAATGGGGTGGCAGTCACC | + |
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Preference number: 1 (lower is better) Translates to: IVYHPASHPEWSWLG*HWNRVTLVNGVAVT Trigger: GGTGACTGCCACCCCATTGACCAGTGTTACTCTGTTCCAGTGTCACCCAAGCCAGCTCCACTCTGGGTGGGAAGCTGGGTGATAAACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR TCA 90 bp | TCAGCAGTGAAAGGGAGAGGCGCACACAGGTGTCAGAGTCCTTGGTaGTACATTGTTTATCACCCAGCTTCCCACCCAGAGTGGAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: SAVKGRGAHRCQSPW*YIVYHPASHPEWSW Trigger: CCAGCTCCACTCTGGGTGGGAAGCTGGGTGATAAACAATGTATCACCAAGGACTCTGACACCTGTGTGCGCCTCTCCCTTTCACTGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CCA 90 bp | ATACATTGTTTATCACCCAGCTTCCCACCCAGAGTGGAGCTGGCTTaGGTGACACTGGAACAGAGTAACACTGGTCAATGGGGTGGCAGT | + |
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Preference number: 1 (lower is better) Translates to: IHCLSPSFPPRVELA*VTLEQSNTGQWGGS Trigger: ACTGCCACCCCATTGACCAGTGTTACTCTGTTCCAGTGTCACCCAAGCCAGCTCCACTCTGGGTGGGAAGCTGGGTGATAAACAATGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CCA 90 bp | GGATTTGGGGACAGCATCAGATGGCTGAAGTGGACACAGACATTCTaGACAATAATGCCTCTCCCTGGAGAGGATGGGACTAGTTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: GFGDSIRWLKWTQTF*TIMPLPGEDGTSWD Trigger: GTCCCAACTAGTCCCATCCTCTCCAGGGAGAGGCATTATTGTCCAGAATGTCTGTGTCCACTTCAGCCATCTGATGCTGTCCCCAAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CCA 90 bp | CTTCCTATTCTTCCCAGCACTGGAAAGCCAGCTGAGGGAAGGATTTaGGGACAGCATCAGATGGCTGAAGTGGACACAGACATTCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: LPILPSTGKPAEGRI*GQHQMAEVDTDILD Trigger: GTCCAGAATGTCTGTGTCCACTTCAGCCATCTGATGCTGTCCCCAAATCCTTCCCTCAGCTGGCTTTCCAGTGCTGGGAAGAATAGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR TCA 90 bp | TCAACACTAAGGTCTTTGATTGTCACAAGATTTTGGCCTCAGCAGTaGAAGGGAGAGGCGCACACAGGTGTCAGAGTCCTTGGTGATACA | + |
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Preference number: 1 (lower is better) Translates to: STLRSLIVTRFWPQQ*KGEAHTGVRVLGDT Trigger: TGTATCACCAAGGACTCTGACACCTGTGTGCGCCTCTCCCTTTCACTGCTGAGGCCAAAATCTTGTGACAATCAAAGACCTTAGTGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CCA 90 bp | AGGATGGGACTAGTTGGGACATATACAGTAGAATGTGGAGTTCTGTaGACCCAAAGAGGGTTTGTCAACACTAAGGTCTTTGATTGTCAC | + |
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Preference number: 1 (lower is better) Translates to: RMGLVGTYTVECGVL*TQRGFVNTKVFDCH Trigger: GTGACAATCAAAGACCTTAGTGTTGACAAACCCTCTTTGGGTCCACAGAACTCCACATTCTACTGTATATGTCCCAACTAGTCCCATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR-3UTR GCA 90 bp | GATACATTGTTTATCACCCAGCTTCCCACCCAGAGTGGAGCTGGCTTGGGTGACCAGCTAATGGGGATCTaGCTAGGGGCGGCAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: DTLFITQLPTQSGAGLGDQLMGI*LGAAGF Trigger: GAAGCCTGCCGCCCCTAGGCAGATCCCCATTAGCTG...GTCACCCAAGCCAGCTCCACTCTGGGTGGGAAGCTGGGTGATAAACAATGTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CAA 90 bp | GGCCTCAGCAGTGAAAGGGAGAGGCGCACACAGGTGTCAGAGTCCTaGGTGATACATTGTTTATCACCCAGCTTCCCACCCAGAGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: GLSSERERRTQVSES*VIHCLSPSFPPRVE Trigger: CTCCACTCTGGGTGGGAAGCTGGGTGATAAACAATGTATCACCAAGGACTCTGACACCTGTGTGCGCCTCTCCCTTTCACTGCTGAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR-3UTR TCA 90 bp | GGTGGCAGTCACCTAGGCTGGCTTTGGCCTTTTCTGGCCACAGCTAATGGGGATAGCCATTGTCTTCTCTaGGAACAGTCTCACGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: GGSHLGWLWPFLATANGDSHCLL*EQSHAG Trigger: GCCAGCGTGAGACTGTTCTCAGAGAAGACAATGGCT...ATCCCCATTAGCTGTGGCCAGAAAAGGCCAAAGCCAGCCTAGGTGACTGCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCAGTGAAAGGGAGAGGCGCACACAGGTGTCAGAGTCCTTGGTGATACATCACTGGTCAATGGGGTaGCAGTCACCTAGGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LSSERERRTQVSESLVIHHWSMG*QSPRLA Trigger: AGCCAGCCTAGGTGACTGCCACCCCATTGACCAGTG...ATGTATCACCAAGGACTCTGACACCTGTGTGCGCCTCTCCCTTTCACTGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CAA 90 bp | GGCAGGCTTCCAGGCACAACAGTAACAAAGGCAGAGAAGGCTCTCTaGGCAGGAGCCATTGTCTTCTCTGAGAACAGTCTCACGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: GRLPGTTVTKAEKAL*AGAIVFSENSLTLA Trigger: TGCCAGCGTGAGACTGTTCTCAGAGAAGACAATGGCTCCTGCCAAGAGAGCCTTCTCTGCCTTTGTTACTGTTGTGCCTGGAAGCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCCTGGAGAGGATGGGACTAGTTGGGACATATACAGTAGAATGTGGAGTTGGCAGTCACCTAGGCTaGCTTTGGCCTTTTCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: LSLERMGLVGTYTVECGVGSHLG*LWPFLA Trigger: GGCCAGAAAAGGCCAAAGCCAGCCTAGGTGACTGCC...AACTCCACATTCTACTGTATATGTCCCAACTAGTCCCATCCTCTCCAGGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CAA 90 bp | CAAAGAGGGTTTGTCAACACTAAGGTCTTTGATTGTCACAAGATTTaGGCCTCAGCAGTGAAAGGGAGAGGCGCACACAGGTGTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: QRGFVNTKVFDCHKI*ASAVKGRGAHRCQS Trigger: ACTCTGACACCTGTGTGCGCCTCTCCCTTTCACTGCTGAGGCCAAAATCTTGTGACAATCAAAGACCTTAGTGTTGACAAACCCTCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CCA 72 bp | GCTTGGGTGACACTGGAACAGAGTAACACTGGTCAATaGGGTGGCAGTCACCTAGGCTGGCTTTGGCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: AWVTLEQSNTGQ*GGSHLGWLWPF Trigger: AAAAGGCCAAAGCCAGCCTAGGTGACTGCCACCCCATTGACCAGTGTTACTCTGTTCCAGTGTCACCCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR TCA 72 bp | AAAGGGAGAGGCGCACACAGGTGTCAGAGTCCTTGGTaGTACATTGTTTATCACCCAGCTTCCCACCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: KGRGAHRCQSPW*YIVYHPASHPE Trigger: CTCTGGGTGGGAAGCTGGGTGATAAACAATGTATCACCAAGGACTCTGACACCTGTGTGCGCCTCTCCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR-3UTR CAA 90 bp | CTCAGCAGTGAAAGGGAGAGGCGCACACAGGTGTCAGAGTCCTTGGTGATACATTCTTGGCAGGAGCCATaGTCTTCTCTGAGAACAGTC | + |
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Preference number: 3 (lower is better) Translates to: LSSERERRTQVSESLVIHSWQEP*SSLRTV Trigger: GACTGTTCTCAGAGAAGACAATGGCTCCTGCCAAGA...ATGTATCACCAAGGACTCTGACACCTGTGTGCGCCTCTCCCTTTCACTGCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR-3UTR CAA 90 bp | CAGATGGCTGAAGTGGACACAGACATTCTGGACAATAATGCCTCTCCCTGGAGAGCAGAGAAGGCTCTCTaGGCAGGAGCCATTGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: QMAEVDTDILDNNASPWRAEKAL*AGAIVF Trigger: GAAGACAATGGCTCCTGCCAAGAGAGCCTTCTCTGC...TCTCCAGGGAGAGGCATTATTGTCCAGAATGTCTGTGTCCACTTCAGCCATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CCA 72 bp | GACAGCATCAGATGGCTGAAGTGGACACAGACATTCTaGACAATAATGCCTCTCCCTGGAGAGGATGGGACT | + |
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Preference number: 3 (lower is better) Translates to: DSIRWLKWTQTF*TIMPLPGEDGT Trigger: AGTCCCATCCTCTCCAGGGAGAGGCATTATTGTCCAGAATGTCTGTGTCCACTTCAGCCATCTGATGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR TCA 72 bp | AGGTCTTTGATTGTCACAAGATTTTGGCCTCAGCAGTaGAAGGGAGAGGCGCACACAGGTGTCAGAGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: RSLIVTRFWPQQ*KGEAHTGVRVL Trigger: AAGGACTCTGACACCTGTGTGCGCCTCTCCCTTTCACTGCTGAGGCCAAAATCTTGTGACAATCAAAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CCA 72 bp | AGGGAAGGATTTGGGGACAGCATCAGATGGCTGAAGTaGACACAGACATTCTGGACAATAATGCCTCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: REGFGDSIRWLK*TQTFWTIMPLP Trigger: AGGGAGAGGCATTATTGTCCAGAATGTCTGTGTCCACTTCAGCCATCTGATGCTGTCCCCAAATCCTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CCA 72 bp | AGCCAGCTGAGGGAAGGATTTGGGGACAGCATCAGATaGCTGAAGTGGACACAGACATTCTGGACAATAATG | + |
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Preference number: 3 (lower is better) Translates to: SQLREGFGDSIR*LKWTQTFWTIM Trigger: CATTATTGTCCAGAATGTCTGTGTCCACTTCAGCCATCTGATGCTGTCCCCAAATCCTTCCCTCAGCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CCA 72 bp | ACAATAATGCCTCTCCCTGGAGAGGATGGGACTAGTTaGGACATATACAGTAGAATGTGGAGTTCTGTGGAC | + |
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Preference number: 3 (lower is better) Translates to: TIMPLPGEDGTS*DIYSRMWSSVD Trigger: GTCCACAGAACTCCACATTCTACTGTATATGTCCCAACTAGTCCCATCCTCTCCAGGGAGAGGCATTATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CCA 72 bp | CTAGTTGGGACATATACAGTAGAATGTGGAGTTCTGTaGACCCAAAGAGGGTTTGTCAACACTAAGGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: LVGTYTVECGVL*TQRGFVNTKVF Trigger: AAAGACCTTAGTGTTGACAAACCCTCTTTGGGTCCACAGAACTCCACATTCTACTGTATATGTCCCAACTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR TCA 90 bp | GGCGGCAGGCTTCCAGGCACAACAGTAACAAAGGCAGAGAAGGCTCTCTTGGCACAGCCCCGAAAGAGATaGGCACAGCTCCCGCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GGRLPGTTVTKAEKALLAQPRKR*AQLPRR Trigger: TCTGCGCGGGAGCTGTGCTCATCTCTTTCGGGGCTG...TGCCAAGAGAGCCTTCTCTGCCTTTGTTACTGTTGTGCCTGGAAGCCTGCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR GCA 90 bp | TTTGGCCTCAGCAGTGAAAGGGAGAGGCGCACACAGGTGTCAGAGTCCTTGGTGCCACGTTACTGTGGTTaGCCCAGTGCCACAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: FGLSSERERRTQVSESLVPRYCG*PSATGQ Trigger: CTGCCCTGTGGCACTGGGGCAACCACAGTAACGTGG...CACCAAGGACTCTGACACCTGTGTGCGCCTCTCCCTTTCACTGCTGAGGCCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR GCA 90 bp | GAGCTGGCTTGGGTGACACTGGAACAGAGTAACACTGGTCAATGGGGTGGCAGTAGCCAGGAAGCCAGCTaGCAGCGCCCCAAAGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: ELAWVTLEQSNTGQWGGSSQEAS*QRPKGC Trigger: ACACCCTTTGGGGCGCTGGCAGCTGGCTTCCTGGCT...ACTGCCACCCCATTGACCAGTGTTACTCTGTTCCAGTGTCACCCAAGCCAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | TTTGGCCTCAGCAGTGAAAGGGAGAGGCGCACACAGGTGTCAGAGTCCTTGGTGGAGTGGAGGAAGCCTTaGAGCAGTGTGGCCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: FGLSSERERRTQVSESLVEWRKP*SSVAHC Trigger: GCAGTGGGCCACACTGCTCCAAGGCTTCCTCCACTC...CACCAAGGACTCTGACACCTGTGTGCGCCTCTCCCTTTCACTGCTGAGGCCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR TCA 90 bp | CTGGAAAGCCAGCTGAGGGAAGGATTTGGGGACAGCATCAGATGGCTGAAGTGGGACGTGGCACTCCGCTaGCCCTTGGCTATGAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LESQLREGFGDSIRWLKWDVALR*PLAMSG Trigger: TCCACTCATAGCCAAGGGTCAGCGGAGTGCCACGTC...CCACTTCAGCCATCTGATGCTGTCCCCAAATCCTTCCCTCAGCTGGCTTTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR GCA 90 bp | CTCAGCAGTGAAAGGGAGAGGCGCACACAGGTGTCAGAGTCCTTGGTGATACATTTGACCACGGTCCGATaGTGCCCATCCCCCAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: LSSERERRTQVSESLVIHLTTVR*CPSPSA Trigger: AGCGCTGGGGGATGGGCAGCATCGGACCGTGGTCAA...ATGTATCACCAAGGACTCTGACACCTGTGTGCGCCTCTCCCTTTCACTGCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | CTCAGCAGTGAAAGGGAGAGGCGCACACAGGTGTCAGAGTCCTTGGTGATACATGCCATTAGCAGCAGCTaGGCTGGCCCAGTCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LSSERERRTQVSESLVIHAISSS*AGPVLP Trigger: GGGCAAGACTGGGCCAGCCCAGCTGCTGCTAATGGC...ATGTATCACCAAGGACTCTGACACCTGTGTGCGCCTCTCCCTTTCACTGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | AACACTGGTCAATGGGGTGGCAGTCACCTAGGCTGGCTTTGGCCTTTTCTGGCCGCTGCGTTCTGGACGTaGACCATGTCCAGTCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: NTGQWGGSHLGWLWPFLAAAFWT*TMSSRP Trigger: TGGACGACTGGACATGGTCCACGTCCAGAACGCAGC...GGCCAGAAAAGGCCAAAGCCAGCCTAGGTGACTGCCACCCCATTGACCAGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR GCA 90 bp | GAGCTGGCTTGGGTGACACTGGAACAGAGTAACACTGGTCAATGGGGTGGCAGTACAGAGCTCTGGCGATaGCTGCTCTTCTCCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ELAWVTLEQSNTGQWGGSTELWR*LLFSSW Trigger: CCAGCTGGAGAAGAGCAGGCATCGCCAGAGCTCTGT...ACTGCCACCCCATTGACCAGTGTTACTCTGTTCCAGTGTCACCCAAGCCAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR GCA 90 bp | GCACTGGAAAGCCAGCTGAGGGAAGGATTTGGGGACAGCATCAGATGGCTGAAGACCTCCAGCCAGTGCTaGGTTCTGGACGTGGACCAT | + |
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Preference number: 4 (lower is better) Translates to: ALESQLREGFGDSIRWLKTSSQC*VLDVDH Trigger: ATGGTCCACGTCCAGAACGCAGCACTGGCTGGAGGT...CTTCAGCCATCTGATGCTGTCCCCAAATCCTTCCCTCAGCTGGCTTTCCAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR GCA 90 bp | CCTGGAGAGGATGGGACTAGTTGGGACATATACAGTAGAATGTGGAGTTCTGTGAGCAGTGTGGCCCACTaGAGGGTGAGGCTGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: PGEDGTSWDIYSRMWSSVSSVAH*RVRLAT Trigger: CGTGGCCAGCCTCACCCTGCAGTGGGCCACACTGCT...CACAGAACTCCACATTCTACTGTATATGTCCCAACTAGTCCCATCCTCTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR GCA 90 bp | GAGAGGATGGGACTAGTTGGGACATATACAGTAGAATGTGGAGTTCTGTGGACCACCACGGTCCGATGCTaGCCATCCCCCAGCGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: ERMGLVGTYTVECGVLWTTTVRC*PSPSAV Trigger: GACAGCGCTGGGGGATGGGCAGCATCGGACCGTGGT...GGTCCACAGAACTCCACATTCTACTGTATATGTCCCAACTAGTCCCATCCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | TGGGGACAGCATCAGATGGCTGAAGTGGACACAGACATTCTGGACAATAATGCCAGGGCAGTGGCGCCTTaGAAGAGCAGGCACAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: WGQHQMAEVDTDILDNNARAVAP*KSRHSS Trigger: GCTGCTGTGCCTGCTCTTCCAAGGCGCCACTGCCCT...GGCATTATTGTCCAGAATGTCTGTGTCCACTTCAGCCATCTGATGCTGTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | CCAGCTGAGGGAAGGATTTGGGGACAGCATCAGATGGCTGAAGTGGACACAGACCCACCGTGGAAAGAGTaGAGGAAGCCTTGGAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PAEGRIWGQHQMAEVDTDPPWKE*RKPWSS Trigger: ACTGCTCCAAGGCTTCCTCCACTCTTTCCACGGTGG...GTCTGTGTCCACTTCAGCCATCTGATGCTGTCCCCAAATCCTTCCCTCAGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | AGCTTCCCACCCAGAGTGGAGCTGGCTTGGGTGACACTGGAACAGAGTAACACTCTCTCCACGCCAACATaGATGTGGCCACCGTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SFPPRVELAWVTLEQSNTLSTPT*MWPPWK Trigger: TTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAG...AGTGTTACTCTGTTCCAGTGTCACCCAAGCCAGCTCCACTCTGGGTGGGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR GCA 90 bp | CTCTCCCTGGAGAGGATGGGACTAGTTGGGACATATACAGTAGAATGTGGAGTTCTGTGGTTGCCCCAGTaGCACAGGGCAGCGTCGGTT | + |
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Preference number: 4 (lower is better) Translates to: LSLERMGLVGTYTVECGVLWLPQ*HRAASV Trigger: AACCGACGCTGCCCTGTGGCACTGGGGCAACCACAG...AACTCCACATTCTACTGTATATGTCCCAACTAGTCCCATCCTCTCCAGGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR GCA 90 bp | ATACATTGTTTATCACCCAGCTTCCCACCCAGAGTGGAGCTGGCTTGGGTGACAAGCTCTGGCGATGCCTaGTCTTCTCCAGCTGGGATC | + |
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Preference number: 4 (lower is better) Translates to: IHCLSPSFPPRVELAWVTSSGDA*SSPAGI Trigger: GATCCCAGCTGGAGAAGAGCAGGCATCGCCAGAGCT...TGTCACCCAAGCCAGCTCCACTCTGGGTGGGAAGCTGGGTGATAAACAATGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR GCA 90 bp | ATACATTGTTTATCACCCAGCTTCCCACCCAGAGTGGAGCTGGCTTGGGTGACATGGGTCTCAGTCTCCTaGTCTCCAGGTACCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: IHCLSPSFPPRVELAWVTWVSVS*SPGTSQ Trigger: CTGGGAGGTACCTGGAGAGCAGGAGACTGAGACCCA...TGTCACCCAAGCCAGCTCCACTCTGGGTGGGAAGCTGGGTGATAAACAATGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CAA 72 bp | GAGGCGCACACAGGTGTCAGAGTCCTTGGTGATACATaGTTTATCACCCAGCTTCCCACCCAGAGTGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: EAHTGVRVLGDT*FITQLPTQSGA Trigger: AGCTCCACTCTGGGTGGGAAGCTGGGTGATAAACAATGTATCACCAAGGACTCTGACACCTGTGTGCGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR TCA 90 bp | CCTATTCTTCCCAGCACTGGAAAGCCAGCTGAGGGAAGGATTTGGGGACAGCATTCCACTGACAAGGGCTaGCAAGGCGAAAGTACTGAG | + |
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Preference number: 4 (lower is better) Translates to: PILPSTGKPAEGRIWGQHSTDKG*QGESTE Trigger: CTCAGTACTTTCGCCTTGTCAGCCCTTGTCAGTGGA...ATGCTGTCCCCAAATCCTTCCCTCAGCTGGCTTTCCAGTGCTGGGAAGAATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR TCA 90 bp | CCCAGAGTGGAGCTGGCTTGGGTGACACTGGAACAGAGTAACACTGGTCAATGGATCCCATGGAGGTTGTaGACACCACATGTGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PRVELAWVTLEQSNTGQWIPWRL*TPHVSC Trigger: GCAAGACACATGTGGTGTTCACAACCTCCATGGGAT...CCATTGACCAGTGTTACTCTGTTCCAGTGTCACCCAAGCCAGCTCCACTCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | AAGGCAGAGAAGGCTCTCTTGGCAGGAGCCATTGTCTTCTCTGAGAACAGTCTCACGCCAACATGGATGTaGCCACCGTGGAAAGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: KAEKALLAGAIVFSENSLTPTWM*PPWKEW Trigger: CCACTCTTTCCACGGTGGCCACATCCATGTTGGCGT...GAGACTGTTCTCAGAGAAGACAATGGCTCCTGCCAAGAGAGCCTTCTCTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | CTCAGCAGTGAAAGGGAGAGGCGCACACAGGTGTCAGAGTCCTTGGTGATACATACCCTTGGCTATGAGTaGAAACACACTCTGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSSERERRTQVSESLVIHTLGYE*KHTLQA Trigger: GGCCTGCAGAGTGTGTTTCCACTCATAGCCAAGGGT...ATGTATCACCAAGGACTCTGACACCTGTGTGCGCCTCTCCCTTTCACTGCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | GAGAGGATGGGACTAGTTGGGACATATACAGTAGAATGTGGAGTTCTGTGGACCCCCCTCAGAGGCCTCTaGGTCTCAGTCTCCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ERMGLVGTYTVECGVLWTPLRGL*VSVSCS Trigger: AGAGCAGGAGACTGAGACCCAGAGGCCTCTGAGGGG...GGTCCACAGAACTCCACATTCTACTGTATATGTCCCAACTAGTCCCATCCTCTC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CAA 72 bp | AGTGAAAGGGAGAGGCGCACACAGGTGTCAGAGTCCTaGGTGATACATTGTTTATCACCCAGCTTCCCACCC | + |
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Preference number: 4 (lower is better) Translates to: SERERRTQVSES*VIHCLSPSFPP Trigger: GGGTGGGAAGCTGGGTGATAAACAATGTATCACCAAGGACTCTGACACCTGTGTGCGCCTCTCCCTTTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR TCA 90 bp | ATACATTGTTTATCACCCAGCTTCCCACCCAGAGTGGAGCTGGCTTGGGTGACAGCTGTAGAAAGACCATaGGGAAGCCAAAGCCCACGA | + |
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Preference number: 4 (lower is better) Translates to: IHCLSPSFPPRVELAWVTAVERP*GSQSPR Trigger: TCGTGGGCTTTGGCTTCCTCATGGTCTTTCTACAGC...TGTCACCCAAGCCAGCTCCACTCTGGGTGGGAAGCTGGGTGATAAACAATGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR TCA 90 bp | AACACTAAGGTCTTTGATTGTCACAAGATTTTGGCCTCAGCAGTGAAAGGGAGATTAGGCCCGGGTGTCTaGCTCCCCACCCCTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTKVFDCHKILASAVKGRLGPGV*LPTPQR Trigger: CCTCTGAGGGGTGGGGAGTCAGACACCCGGGCCTAA...TCTCCCTTTCACTGCTGAGGCCAAAATCTTGTGACAATCAAAGACCTTAGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR GCA 90 bp | GTAGAATGTGGAGTTCTGTGGACCCAAAGAGGGTTTGTCAACACTAAGGTCTTTGGGCTGGCCCAGTCTTaGCCAGAACAGCCCCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VECGVLWTQRGFVNTKVFGLAQS*PEQPRK Trigger: CTTTCGGGGCTGTTCTGGGCAAGACTGGGCCAGCCC...AAAGACCTTAGTGTTGACAAACCCTCTTTGGGTCCACAGAACTCCACATTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | TGGGGACAGCATCAGATGGCTGAAGTGGACACAGACATTCTGGACAATAATGCCTGGATGTGGCCACCGTaGAAAGAGTGGAGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WGQHQMAEVDTDILDNNAWMWPP*KEWRKP Trigger: AGGCTTCCTCCACTCTTTCCACGGTGGCCACATCCA...GGCATTATTGTCCAGAATGTCTGTGTCCACTTCAGCCATCTGATGCTGTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | GAGCTGGCTTGGGTGACACTGGAACAGAGTAACACTGGTCAATGGGGTGGCAGTAGATGGTCCCGATCATaGCAAAGAGGTCAGAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ELAWVTLEQSNTGQWGGSRWSRS*QRGQSC Trigger: ACAACTCTGACCTCTTTGCCATGATCGGGACCATCT...ACTGCCACCCCATTGACCAGTGTTACTCTGTTCCAGTGTCACCCAAGCCAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | GCTCTCTTGGCAGGAGCCATTGTCTTCTCTGAGAACAGTCTCACGCTGGCAGCAAAACCCACAGGAAGATaGTCCCGATCATGGCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: ALLAGAIVFSENSLTLAAKPTGR*SRSWQR Trigger: TCTTTGCCATGATCGGGACCATCTTCCTGTGGGTTT...TGCTGCCAGCGTGAGACTGTTCTCAGAGAAGACAATGGCTCCTGCCAAGAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | ATACATTGTTTATCACCCAGCTTCCCACCCAGAGTGGAGCTGGCTTGGGTGACAGCAGCGTCGGTTTCGTaGTTGTACCGGACAAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: IHCLSPSFPPRVELAWVTAASVS*LYRTKI Trigger: TATCTTTGTCCGGTACAACCACGAAACCGACGCTGC...TGTCACCCAAGCCAGCTCCACTCTGGGTGGGAAGCTGGGTGATAAACAATGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CAA 72 bp | CCAGGCACAACAGTAACAAAGGCAGAGAAGGCTCTCTaGGCAGGAGCCATTGTCTTCTCTGAGAACAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGTTVTKAEKAL*AGAIVFSENSL Trigger: GAGACTGTTCTCAGAGAAGACAATGGCTCCTGCCAAGAGAGCCTTCTCTGCCTTTGTTACTGTTGTGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR TCA 90 bp | TCCCTGGAGAGGATGGGACTAGTTGGGACATATACAGTAGAATGTGGAGTTCTGGCTGACCCTTGGCTATaGGTGGAAACACACTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLERMGLVGTYTVECGVLADPWL*VETHSA Trigger: TGCAGAGTGTGTTTCCACTCATAGCCAAGGGTCAGC...CAGAACTCCACATTCTACTGTATATGTCCCAACTAGTCCCATCCTCTCCAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | TTTGTCAACACTAAGGTCTTTGATTGTCACAAGATTTTGGCCTCAGCAGTGAAACTACGACTCCCAGGATaGCCCCCAGGACCCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FVNTKVFDCHKILASAVKLRLPG*PPGPLA Trigger: TGCCAGGGGTCCTGGGGGCCATCCTGGGAGTCGTAG...TTTCACTGCTGAGGCCAAAATCTTGTGACAATCAAAGACCTTAGTGTTGACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR GCA 90 bp | ATTTTGGCCTCAGCAGTGAAAGGGAGAGGCGCACACAGGTGTCAGAGTCCTTGGACACCACATGTGTCTTaGAGTTTAAATCTGGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILASAVKGRGAHRCQSPWTPHVS*SLNLDS Trigger: TGAATCCAGATTTAAACTGCAAGACACATGTGGTGT...CCAAGGACTCTGACACCTGTGTGCGCCTCTCCCTTTCACTGCTGAGGCCAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | TATACAGTAGAATGTGGAGTTCTGTGGACCCAAAGAGGGTTTGTCAACACTAAGGAAGCATTGGGAGTCTaGAGGGGAGTCCAGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YTVECGVLWTQRGFVNTKEALGV*RGVQKG Trigger: CCCTTTCTGGACTCCCCTCCAGACTCCCAATGCTTC...CTTAGTGTTGACAAACCCTCTTTGGGTCCACAGAACTCCACATTCTACTGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| 3UTR CAA 72 bp | TTTGTCAACACTAAGGTCTTTGATTGTCACAAGATTTaGGCCTCAGCAGTGAAAGGGAGAGGCGCACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FVNTKVFDCHKI*ASAVKGRGAHR Trigger: CCTGTGTGCGCCTCTCCCTTTCACTGCTGAGGCCAAAATCTTGTGACAATCAAAGACCTTAGTGTTGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CCA 90 bp | TGTGGACCCAAAGAGGGTTTGTCAACACTAAGGTCTTTGATTGTCACAAGATTTACTTATACCCCAGTGTaGAGACAGTCCCAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CGPKEGLSTLRSLIVTRFTYTPV*RQSQPG Trigger: TCCTGGCTGGGACTGTCTCCACACTGGGGTATAAGT...AAATCTTGTGACAATCAAAGACCTTAGTGTTGACAAACCCTCTTTGGGTCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 90 bp | TGGTTGTACCGGACAAAGATAGCAAAGAGGAGGGCAGTGGCGCCTTaGAAGAGCAGGCACAGCAGCGGCAGGACCAGGCGCCGGTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WLYRTKIAKRRAVAP*KSRHSSGRTRRRWR Trigger: CCGCCACCGGCGCCTGGTCCTGCCGCTGCTGTGCCTGCTCTTCCAAGGCGCCACTGCCCTCCTCTTTGCTATCTTTGTCCGGTACAACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 90 bp | ACGCCAACATGGATGTGGCCACCGTGGAAAGAGTGGAGGAAGCCTTaGAGCAGTGTGGCCCACTGCAGGGTGAGGCTGGCCACGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TPTWMWPPWKEWRKP*SSVAHCRVRLATRK Trigger: CTTCCTCGTGGCCAGCCTCACCCTGCAGTGGGCCACACTGCTCCAAGGCTTCCTCCACTCTTTCCACGGTGGCCACATCCATGTTGGCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 90 bp | CATAAGCTTCGTGGGTGGCCAGTGCAGCCACTACGACTCCCAGGATaGCCCCCAGGACCCCTGGCATCCCATGGAGGTTGTGAACACCAC | + |
|
Preference number: 5 (lower is better) Translates to: HKLRGWPVQPLRLPG*PPGPLASHGGCEHH Trigger: GTGGTGTTCACAACCTCCATGGGATGCCAGGGGTCCTGGGGGCCATCCTGGGAGTCGTAGTGGCTGCACTGGCCACCCACGAAGCTTATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS GCA 90 bp | AAACACACTCTGCAGGCCATCTCCATAAGCTTCGTGGGTGGCCAGTaGAGCCACTACGACTCCCAGGATGGCCCCCAGGACCCCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KHTLQAISISFVGGQ*SHYDSQDGPQDPWH Trigger: ATGCCAGGGGTCCTGGGGGCCATCCTGGGAGTCGTAGTGGCTGCACTGGCCACCCACGAAGCTTATGGAGATGGCCTGCAGAGTGTGTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 90 bp | TCCAGGTACCTCCCAGTAAACCTGGTCCTCGAAGCATTGGGAGTCTaGAGGGGAGTCCAGAAAGGGGAGCCGCAGCAGGAGCCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRYLPVNLVLEALGV*RGVQKGEPQQEPSK Trigger: CTTGGAGGGCTCCTGCTGCGGCTCCCCTTTCTGGACTCCCCTCCAGACTCCCAATGCTTCGAGGACCAGGTTTACTGGGAGGTACCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS TCA 90 bp | GAAGCCAGCTGCCAGCGCCCCAAAGGGTGTCAGCATCATCTCACTTaGTGTCCCCACCACAACACCTCCAGCCAGTGCTGCGTTCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EASCQRPKGCQHHLT*CPHHNTSSQCCVLD Trigger: GTCCAGAACGCAGCACTGGCTGGAGGTGTTGTGGTGGGGACATCAAGTGAGATGATGCTGACACCCTTTGGGGCGCTGGCAGCTGGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 90 bp | GGCCAGTGCAGCCACTACGACTCCCAGGATGGCCCCCAGGACCCCTaGCATCCCATGGAGGTTGTGAACACCACATGTGTCTTGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GQCSHYDSQDGPQDP*HPMEVVNTTCVLQF Trigger: AAACTGCAAGACACATGTGGTGTTCACAACCTCCATGGGATGCCAGGGGTCCTGGGGGCCATCCTGGGAGTCGTAGTGGCTGCACTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CAA 90 bp | CCTAGGGGCGGCAGGCTTCCAGGCACAACAGTAACAAAGGCAGAGAAGGCTCTCCTGGTCCTCGAAGCATaGGGAGTCTGGAGGGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PRGGRLPGTTVTKAEKALLVLEA*GVWRGV Trigger: GACTCCCCTCCAGACTCCCAATGCTTCGAGGACCAG...GAGAGCCTTCTCTGCCTTTGTTACTGTTGTGCCTGGAAGCCTGCCGCCCCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS TCA 90 bp | GCAGGAGCCCTCCAAGGCTGCCACCCACAGAGGCAAACACCAGTGTaGCAAACATTCCGAAGAGCTGATACACGGCCTGAGACGTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: AGALQGCHPQRQTPV*QTFRRADTRPETWH Trigger: GTGCCACGTCTCAGGCCGTGTATCAGCTCTTCGGAATGTTTGTCACACTGGTGTTTGCCTCTGTGGGTGGCAGCCTTGGAGGGCTCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 90 bp | ACGTTACTGTGGTTGCCCCAGTGCCACAGGGCAGCGTCGGTTTCGTaGTTGTACCGGACAAAGATAGCAAAGAGGAGGGCAGTGGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TLLWLPQCHRAASVS*LYRTKIAKRRAVAP Trigger: AGGCGCCACTGCCCTCCTCTTTGCTATCTTTGTCCGGTACAACCACGAAACCGACGCTGCCCTGTGGCACTGGGGCAACCACAGTAACGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 90 bp | ATCAAACTCTCCACGCCAACATGGATGTGGCCACCGTGGAAAGAGTaGAGGAAGCCTTGGAGCAGTGTGGCCCACTGCAGGGTGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IKLSTPTWMWPPWKE*RKPWSSVAHCRVRL Trigger: CAGCCTCACCCTGCAGTGGGCCACACTGCTCCAAGGCTTCCTCCACTCTTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAGTTTGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CAA 90 bp | CCAGCTGAGGGAAGGATTTGGGGACAGCATCAGATGGCTGAAGTGGACACAGACTGGGCTGGCCCAGTCTaGCCCAGAACAGCCCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PAEGRIWGQHQMAEVDTDWAGPV*PRTAPK Trigger: TTTCGGGGCTGTTCTGGGCAAGACTGGGCCAGCCCA...GTCTGTGTCCACTTCAGCCATCTGATGCTGTCCCCAAATCCTTCCCTCAGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS TCA 90 bp | GCTGATACACGGCCTGAGACGTGGCACTCCGCTGACCCTTGGCTATaGGTGGAAACACACTCTGCAGGCCATCTCCATAAGCTTCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ADTRPETWHSADPWL*VETHSAGHLHKLRG Trigger: CCCACGAAGCTTATGGAGATGGCCTGCAGAGTGTGTTTCCACTCATAGCCAAGGGTCAGCGGAGTGCCACGTCTCAGGCCGTGTATCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 90 bp | GCTCCCGCGCAGAAGTCAGCGTTGATCAAACTCTCCACGCCAACATaGATGTGGCCACCGTGGAAAGAGTGGAGGAAGCCTTGGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: APAQKSALIKLSTPT*MWPPWKEWRKPWSS Trigger: ACTGCTCCAAGGCTTCCTCCACTCTTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAGTTTGATCAACGCTGACTTCTGCGCGGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 90 bp | TCACTTGATGTCCCCACCACAACACCTCCAGCCAGTGCTGCGTTCTaGACGTGGACCATGTCCAGTCGTCCATCTCCACTGACAAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLDVPTTTPPASAAF*TWTMSSRPSPLTRA Trigger: AGCCCTTGTCAGTGGAGATGGACGACTGGACATGGTCCACGTCCAGAACGCAGCACTGGCTGGAGGTGTTGTGGTGGGGACATCAAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 90 bp | ATACACGGCCTGAGACGTGGCACTCCGCTGACCCTTGGCTATGAGTaGAAACACACTCTGCAGGCCATCTCCATAAGCTTCGTGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IHGLRRGTPLTLGYE*KHTLQAISISFVGG Trigger: GCCACCCACGAAGCTTATGGAGATGGCCTGCAGAGTGTGTTTCCACTCATAGCCAAGGGTCAGCGGAGTGCCACGTCTCAGGCCGTGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CAA 90 bp | GAGCTGGCTTGGGTGACACTGGAACAGAGTAACACTGGTCAATGGGGTGGCAGTAGAGTGGAGGAAGCCTaGGAGCAGTGTGGCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ELAWVTLEQSNTGQWGGSRVEEA*EQCGPL Trigger: CAGTGGGCCACACTGCTCCAAGGCTTCCTCCACTCT...ACTGCCACCCCATTGACCAGTGTTACTCTGTTCCAGTGTCACCCAAGCCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CAA 90 bp | AAGGCAGAGAAGGCTCTCTTGGCAGGAGCCATTGTCTTCTCTGAGAACAGTCTCTCCACGTTACTGTGGTaGCCCCAGTGCCACAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KAEKALLAGAIVFSENSLSTLLW*PQCHRA Trigger: TGCCCTGTGGCACTGGGGCAACCACAGTAACGTGGA...GAGACTGTTCTCAGAGAAGACAATGGCTCCTGCCAAGAGAGCCTTCTCTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS-3UTR CAA 90 bp | GTAGAATGTGGAGTTCTGTGGACCCAAAGAGGGTTTGTCAACACTAAGGTCTTTGCTGTCGGCGCGGAGTaGAAGCTGGGCCAGAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: VECGVLWTQRGFVNTKVFAVGAE*KLGQKT Trigger: GGTTTTCTGGCCCAGCTTCAACTCCGCGCCGACAGC...AAAGACCTTAGTGTTGACAAACCCTCTTTGGGTCCACAGAACTCCACATTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 72 bp | GCCCGGGTGTCTGACTCCCCACCCCTCAGAGGCCTCTaGGTCTCAGTCTCCTGCTCTCCAGGTACCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ARVSDSPPLRGL*VSVSCSPGTSQ Trigger: CTGGGAGGTACCTGGAGAGCAGGAGACTGAGACCCAGAGGCCTCTGAGGGGTGGGGAGTCAGACACCCGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CAA 90 bp | GTGGTTGTACCGGACAAAGATAGCAAAGAGGAGGGCAGTGGCGCCTaGGAAGAGCAGGCACAGCAGCGGCAGGACCAGGCGCCGGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VVVPDKDSKEEGSGA*EEQAQQRQDQAPVA Trigger: CGCCACCGGCGCCTGGTCCTGCCGCTGCTGTGCCTGCTCTTCCAAGGCGCCACTGCCCTCCTCTTTGCTATCTTTGTCCGGTACAACCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS GCA 72 bp | CTGCAGGCCATCTCCATAAGCTTCGTGGGTGGCCAGTaGAGCCACTACGACTCCCAGGATGGCCCCCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LQAISISFVGGQ*SHYDSQDGPQD Trigger: GTCCTGGGGGCCATCCTGGGAGTCGTAGTGGCTGCACTGGCCACCCACGAAGCTTATGGAGATGGCCTGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 72 bp | CGGACAAAGATAGCAAAGAGGAGGGCAGTGGCGCCTTaGAAGAGCAGGCACAGCAGCGGCAGGACCAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RTKIAKRRAVAP*KSRHSSGRTRR Trigger: GCGCCTGGTCCTGCCGCTGCTGTGCCTGCTCTTCCAAGGCGCCACTGCCCTCCTCTTTGCTATCTTTGTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CAA 72 bp | CCGGACAAAGATAGCAAAGAGGAGGGCAGTGGCGCCTaGGAAGAGCAGGCACAGCAGCGGCAGGACCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PDKDSKEEGSGA*EEQAQQRQDQA Trigger: CGCCTGGTCCTGCCGCTGCTGTGCCTGCTCTTCCAAGGCGCCACTGCCCTCCTCTTTGCTATCTTTGTCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CAA 90 bp | CACGCCAACATGGATGTGGCCACCGTGGAAAGAGTGGAGGAAGCCTaGGAGCAGTGTGGCCCACTGCAGGGTGAGGCTGGCCACGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HANMDVATVERVEEA*EQCGPLQGEAGHEE Trigger: TTCCTCGTGGCCAGCCTCACCCTGCAGTGGGCCACACTGCTCCAAGGCTTCCTCCACTCTTTCCACGGTGGCCACATCCATGTTGGCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CAA 90 bp | CTCCTGCTCTCCAGGTACCTCCCAGTAAACCTGGTCCTCGAAGCATaGGGAGTCTGGAGGGGAGTCCAGAAAGGGGAGCCGCAGCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLLSRYLPVNLVLEA*GVWRGVQKGEPQQE Trigger: CTCCTGCTGCGGCTCCCCTTTCTGGACTCCCCTCCAGACTCCCAATGCTTCGAGGACCAGGTTTACTGGGAGGTACCTGGAGAGCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 72 bp | TCCACGCCAACATGGATGTGGCCACCGTGGAAAGAGTaGAGGAAGCCTTGGAGCAGTGTGGCCCACTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: STPTWMWPPWKE*RKPWSSVAHCR Trigger: CCTGCAGTGGGCCACACTGCTCCAAGGCTTCCTCCACTCTTTCCACGGTGGCCACATCCATGTTGGCGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 72 bp | GTCCCCACCACAACACCTCCAGCCAGTGCTGCGTTCTaGACGTGGACCATGTCCAGTCGTCCATCTCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: VPTTTPPASAAF*TWTMSSRPSPL Trigger: CAGTGGAGATGGACGACTGGACATGGTCCACGTCCAGAACGCAGCACTGGCTGGAGGTGTTGTGGTGGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 72 bp | CTCCCAGTAAACCTGGTCCTCGAAGCATTGGGAGTCTaGAGGGGAGTCCAGAAAGGGGAGCCGCAGCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPVNLVLEALGV*RGVQKGEPQQE Trigger: CTCCTGCTGCGGCTCCCCTTTCTGGACTCCCCTCCAGACTCCCAATGCTTCGAGGACCAGGTTTACTGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CAA 72 bp | TCCAGGTACCTCCCAGTAAACCTGGTCCTCGAAGCATaGGGAGTCTGGAGGGGAGTCCAGAAAGGGGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: SRYLPVNLVLEA*GVWRGVQKGEP Trigger: CGGCTCCCCTTTCTGGACTCCCCTCCAGACTCCCAATGCTTCGAGGACCAGGTTTACTGGGAGGTACCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CAA 90 bp | TTACTGTGGTTGCCCCAGTGCCACAGGGCAGCGTCGGTTTCGTGGTaGTACCGGACAAAGATAGCAAAGAGGAGGGCAGTGGCGCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LLWLPQCHRAASVSW*YRTKIAKRRAVAPW Trigger: CCAAGGCGCCACTGCCCTCCTCTTTGCTATCTTTGTCCGGTACAACCACGAAACCGACGCTGCCCTGTGGCACTGGGGCAACCACAGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS TCA 72 bp | CGGCCTGAGACGTGGCACTCCGCTGACCCTTGGCTATaGGTGGAAACACACTCTGCAGGCCATCTCCATAAG | + |
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Preference number: 6 (lower is better) Translates to: RPETWHSADPWL*VETHSAGHLHK Trigger: CTTATGGAGATGGCCTGCAGAGTGTGTTTCCACTCATAGCCAAGGGTCAGCGGAGTGCCACGTCTCAGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 72 bp | TGGTTGCCCCAGTGCCACAGGGCAGCGTCGGTTTCGTaGTTGTACCGGACAAAGATAGCAAAGAGGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: WLPQCHRAASVS*LYRTKIAKRRA Trigger: TGCCCTCCTCTTTGCTATCTTTGTCCGGTACAACCACGAAACCGACGCTGCCCTGTGGCACTGGGGCAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 72 bp | ACCACAACACCTCCAGCCAGTGCTGCGTTCTGGACGTaGACCATGTCCAGTCGTCCATCTCCACTGACAAGG | + |
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Preference number: 6 (lower is better) Translates to: TTTPPASAAFWT*TMSSRPSPLTR Trigger: CCTTGTCAGTGGAGATGGACGACTGGACATGGTCCACGTCCAGAACGCAGCACTGGCTGGAGGTGTTGTGGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CAA 72 bp | TTGCCCCAGTGCCACAGGGCAGCGTCGGTTTCGTGGTaGTACCGGACAAAGATAGCAAAGAGGAGGGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LPQCHRAASVSW*YRTKIAKRRAV Trigger: CACTGCCCTCCTCTTTGCTATCTTTGTCCGGTACAACCACGAAACCGACGCTGCCCTGTGGCACTGGGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS TCA 72 bp | GACCATGTCCAGTCGTCCATCTCCACTGACAAGGGCTaGCAAGGCGAAAGTACTGAGGGTGCTTGCGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: DHVQSSISTDKG*QGESTEGACGE Trigger: CTCACCGCAAGCACCCTCAGTACTTTCGCCTTGTCAGCCCTTGTCAGTGGAGATGGACGACTGGACATGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS TCA 72 bp | CTCCAAGGCTGCCACCCACAGAGGCAAACACCAGTGTaGCAAACATTCCGAAGAGCTGATACACGGCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LQGCHPQRQTPV*QTFRRADTRPE Trigger: CTCAGGCCGTGTATCAGCTCTTCGGAATGTTTGTCACACTGGTGTTTGCCTCTGTGGGTGGCAGCCTTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS GCA 72 bp | AGCGAAAGTAAAACTCGTTGTCCACGTTACTGTGGTTaGCCCAGTGCCACAGGGCAGCGTCGGTTTCGTGGT | + |
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Preference number: 6 (lower is better) Translates to: SESKTRCPRYCG*PSATGQRRFRG Trigger: ACCACGAAACCGACGCTGCCCTGTGGCACTGGGGCAACCACAGTAACGTGGACAACGAGTTTTACTTTCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 72 bp | CTGAGACGTGGCACTCCGCTGACCCTTGGCTATGAGTaGAAACACACTCTGCAGGCCATCTCCATAAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LRRGTPLTLGYE*KHTLQAISISF Trigger: GAAGCTTATGGAGATGGCCTGCAGAGTGTGTTTCCACTCATAGCCAAGGGTCAGCGGAGTGCCACGTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CCA 72 bp | CAGAAGTCAGCGTTGATCAAACTCTCCACGCCAACATaGATGTGGCCACCGTGGAAAGAGTGGAGGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: QKSALIKLSTPT*MWPPWKEWRKP Trigger: AGGCTTCCTCCACTCTTTCCACGGTGGCCACATCCATGTTGGCGTGGAGAGTTTGATCAACGCTGACTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CAA 90 bp | CCTCCAGCATCTCTCACCCCCAGGAGACTGAGTAGTATAAACTCGTaGACGCTAAACAGCACTGCCTCCAGTAGAGCCATTAGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PPASLTPRRLSSINS*TLNSTASSRAISSS Trigger: GCTGCTGCTAATGGCTCTACTGGAGGCAGTGCTGTTTAGCGTCAACGAGTTTATACTACTCAGTCTCCTGGGGGTGAGAGATGCTGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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| CDS CAA 72 bp | TCTCTCACCCCCAGGAGACTGAGTAGTATAAACTCGTaGACGCTAAACAGCACTGCCTCCAGTAGAGCCATT | + |
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Preference number: 6 (lower is better) Translates to: SLTPRRLSSINS*TLNSTASSRAI Trigger: AATGGCTCTACTGGAGGCAGTGCTGTTTAGCGTCAACGAGTTTATACTACTCAGTCTCCTGGGGGTGAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171887.4 |
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