Pregenerated sensors for RHBDL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017692Ensembl transcript IDs: ENSMUST00000017836.8
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGAGGCACTGGGCTCTGAGTCTACAGTTACCTTGCCAAACACCTaGTGTGGCATCCCAGGCTGCTGGGGTATGGACAGCACAAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: AEALGSESTVTLPNT*CGIPGCWGMDSTRP Trigger: TGGCCTTGTGCTGTCCATACCCCAGCAGCCTGGGATGCCACATCAGGTGTTTGGCAAGGTAACTGTAGACTCAGAGCCCAGTGCCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR CCA 90 bp | GGAAGAGGGCTATTTGCTCACTCTGTGGCAGTGAGAGGGAATGCATaGGACAAGCCCAAGCCACAGGGACAGCCACTCTTACCCTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: GRGLFAHSVAVRGNA*DKPKPQGQPLLPCL Trigger: GAGGCAGGGTAAGAGTGGCTGTCCCTGTGGCTTGGGCTTGTCCCATGCATTCCCTCTCACTGCCACAGAGTGAGCAAATAGCCCTCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR TCA 90 bp | CCCCCGGATCAAAGCCATCACATCCATTGCCAGAGCACCAGACCTTaGGCTGCAAAGAGAATGTGGCCTAGCCTACAGTCACCTCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: PPDQSHHIHCQSTRP*AAKRMWPSLQSPLG Trigger: GCCCAGAGGTGACTGTAGGCTAGGCCACATTCTCTTTGCAGCTCAAGGTCTGGTGCTCTGGCAATGGATGTGATGGCTTTGATCCGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR TCA 90 bp | GCCAGCCTGAGTAGACTGTCTCAGAGGAGCAGAGGCACTGGGCTCTaGGTCTACAGTTACCTTGCCAAACACCTGATGTGGCATCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: ASLSRLSQRSRGTGL*VYSYLAKHLMWHPR Trigger: CCTGGGATGCCACATCAGGTGTTTGGCAAGGTAACTGTAGACTCAGAGCCCAGTGCCTCTGCTCCTCTGAGACAGTCTACTCAGGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR TCA 90 bp | GGACTCAGGAGAATGGAGATGAGCTGGGAGGTATTGCTGGGATGGTaGGAGGACCAGGAGCAGTTCTCATCCTCCTGCCTCCCTCCAATC | + |
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Preference number: 1 (lower is better) Translates to: GLRRMEMSWEVLLGW*EDQEQFSSSCLPPI Trigger: GATTGGAGGGAGGCAGGAGGATGAGAACTGCTCCTGGTCCTCTCACCATCCCAGCAATACCTCCCAGCTCATCTCCATTCTCCTGAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR TCA 90 bp | TGCAAGCTAGTCTACATAGCTGCTGTTTGGGGATTCCCCAGCCTTTaGGGCCAACCTACAGCCTCCAGCATGAGGAGTGACTCCCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: CKLVYIAAVWGFPSL*GQPTASSMRSDSQP Trigger: GGGCTGGGAGTCACTCCTCATGCTGGAGGCTGTAGGTTGGCCTCAAAGGCTGGGGAATCCCCAAACAGCAGCTATGTAGACTAGCTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR GCA 90 bp | CTAGGGAAGAGGGCTATTTGCTCACTCTGTGGCAGTGAGAGGGAATaGATGGGACAAGCCCAAGCCACAGGGACAGCCACTCTTACCCTG | + |
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Preference number: 1 (lower is better) Translates to: LGKRAICSLCGSERE*MGQAQATGTATLTL Trigger: CAGGGTAAGAGTGGCTGTCCCTGTGGCTTGGGCTTGTCCCATGCATTCCCTCTCACTGCCACAGAGTGAGCAAATAGCCCTCTTCCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR GCA 90 bp | GTCTCAGAGGAGCAGAGGCACTGGGCTCTGAGTCTACAGTTACCTTaGCAAACACCTGATGTGGCATCCCAGGCTGCTGGGGTATGGACA | + |
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Preference number: 1 (lower is better) Translates to: VSEEQRHWALSLQLP*QTPDVASQAAGVWT Trigger: TGTCCATACCCCAGCAGCCTGGGATGCCACATCAGGTGTTTGGCAAGGTAACTGTAGACTCAGAGCCCAGTGCCTCTGCTCCTCTGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR CCA 90 bp | GACCTTGAGCTGCAAAGAGAATGTGGCCTAGCCTACAGTCACCTCTaGGCCGTGGCAAGCCTGGCTGTGGCTATCCTCAGAACTTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: DLELQRECGLAYSHL*AVASLAVAILRTSL Trigger: CAGAGAAGTTCTGAGGATAGCCACAGCCAGGCTTGCCACGGCCCAGAGGTGACTGTAGGCTAGGCCACATTCTCTTTGCAGCTCAAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR CCA 90 bp | ACAGGCAGGAAGAAGAAACCGTCCTGGAACTCTCTTGGGGGAACCTaGGATGAAGAAAGTCATTACCTCAGCACAGGGCCCTCCCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: TGRKKKPSWNSLGGT*DEESHYLSTGPSPR Trigger: CCTAGGGGAGGGCCCTGTGCTGAGGTAATGACTTTCTTCATCCCAGGTTCCCCCAAGAGAGTTCCAGGACGGTTTCTTCTTCCTGCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR CCA 90 bp | CCAAGTCCCTGTAGATGGAGCCATCTAACCCTCAGCTGCTCTCACTaGGGACATTCCCTCACCCAAGCTTCCCCAATTCTTCTCAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: PSPCRWSHLTLSCSH*GHSLTQASPILLRG Trigger: GCCTCTGAGAAGAATTGGGGAAGCTTGGGTGAGGGAATGTCCCCAGTGAGAGCAGCTGAGGGTTAGATGGCTCCATCTACAGGGACTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR TCA 90 bp | CAGATAGGGCATGGATGCAGAGCGATGGTCTGGAATGCTGACTCGTaGCTACAGGCAGGAAGAAGAAACCGTCCTGGAACTCTCTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: QIGHGCRAMVWNADS*LQAGRRNRPGTLLG Trigger: CCCCAAGAGAGTTCCAGGACGGTTTCTTCTTCCTGCCTGTAGTCACGAGTCAGCATTCCAGACCATCGCTCTGCATCCATGCCCTATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR CCA 90 bp | CAGGAGCAGTTCTCATCCTCCTGCCTCCCTCCAATCTCAGACCTGTaGTTCCTTATCCCAGGGGCTGAAAGTCCCTATAAAGGTCACCTG | + |
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Preference number: 1 (lower is better) Translates to: QEQFSSSCLPPISDL*FLIPGAESPYKGHL Trigger: CAGGTGACCTTTATAGGGACTTTCAGCCCCTGGGATAAGGAACCACAGGTCTGAGATTGGAGGGAGGCAGGAGGATGAGAACTGCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR GCA 90 bp | ACTTCTCTGTGTCTCTCCAGGTGGAGACTAGGGAAGAGGGCTATTTaGTCACTCTGTGGCAGTGAGAGGGAATGCATGGGACAAGCCCAA | + |
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Preference number: 1 (lower is better) Translates to: TSLCLSRWRLGKRAI*SLCGSERECMGQAQ Trigger: TTGGGCTTGTCCCATGCATTCCCTCTCACTGCCACAGAGTGAGCAAATAGCCCTCTTCCCTAGTCTCCACCTGGAGAGACACAGAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR CCA 90 bp | CCCCAATCTCACTTCCCTGTAAGAGTACTTCCAAGTCCCTGTAGATaGAGCCATCTAACCCTCAGCTGCTCTCACTGGGGACATTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: PQSHFPVRVLPSPCR*SHLTLSCSHWGHSL Trigger: GAGGGAATGTCCCCAGTGAGAGCAGCTGAGGGTTAGATGGCTCCATCTACAGGGACTTGGAAGTACTCTTACAGGGAAGTGAGATTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR GCA 90 bp | AGAGTACTTCCAAGTCCCTGTAGATGGAGCCATCTAACCCTCAGCTaGTCTCACTGGGGACATTCCCTCACCCAAGCTTCCCCAATTCTT | + |
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Preference number: 1 (lower is better) Translates to: RVLPSPCRWSHLTLS*SHWGHSLTQASPIL Trigger: AAGAATTGGGGAAGCTTGGGTGAGGGAATGTCCCCAGTGAGAGCAGCTGAGGGTTAGATGGCTCCATCTACAGGGACTTGGAAGTACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR GCA 90 bp | CAGCCAGCCCTGGGAAGCACACAGCACTGGGTAAACCTCATTATCTaGAAACTGAATTGGACACTAGAGGAAGATCTGGGTTCGGTGAGC | + |
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Preference number: 1 (lower is better) Translates to: QPALGSTQHWVNLII*KLNWTLEEDLGSVS Trigger: GCTCACCGAACCCAGATCTTCCTCTAGTGTCCAATTCAGTTTGCAGATAATGAGGTTTACCCAGTGCTGTGTGCTTCCCAGGGCTGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR TCA 90 bp | AGCTCCAACAGTCTCCGGTTCTCCCTGCTTTCACTGAATTGGAGATaGGAAGCAGATGCAGGTACTTTCTCGGGATGCTTCTGTTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: SSNSLRFSLLSLNWR*EADAGTFSGCFCFP Trigger: GGGGAAACAGAAGCATCCCGAGAAAGTACCTGCATCTGCTTCTCATCTCCAATTCAGTGAAAGCAGGGAGAACCGGAGACTGTTGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR GCA 90 bp | CTTGTGTACATTGTCTCCCACTTCTTCCCTCTGCAGCTTCTGACTTaGCTGACATTGCACACACACACACACACACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: LVYIVSHFFPLQLLT*LTLHTHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAATGTCAGGCAAGTCAGAAGCTGCAGAGGGAAGAAGTGGGAGACAATGTACACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR GCA 90 bp | CAAACACCTGATGTGGCATCCCAGGCTGCTGGGGTATGGACAGCACAAGGCCACGGCAGTGAGAGGGAATaGATGGGACAAGCCCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: QTPDVASQAAGVWTAQGHGSERE*MGQAQA Trigger: GGCTTGGGCTTGTCCCATGCATTCCCTCTCACTGCC...GTGGCCTTGTGCTGTCCATACCCCAGCAGCCTGGGATGCCACATCAGGTGTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCAGAGGAGAGTCAACGATTTGCAGCCAGCCCTGGGAAGCACACAGCACTGGCATCTAACCCTCAGCTaGTCTCACTGGGGACATTCC | + |
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Preference number: 2 (lower is better) Translates to: RQRRVNDLQPALGSTQHWHLTLS*SHWGHS Trigger: GGAATGTCCCCAGTGAGAGCAGCTGAGGGTTAGATG...CCAGTGCTGTGTGCTTCCCAGGGCTGGCTGCAAATCGTTGACTCTCCTCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR CCA 90 bp | CAAACACCTGATGTGGCATCCCAGGCTGCTGGGGTATGGACAGCACAAGGCCACTGCTCAGCAGGTGTTTaGGAGGGCAAGATGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: QTPDVASQAAGVWTAQGHCSAGV*EGKMGK Trigger: CTTTCCCATCTTGCCCTCCCAAACACCTGCTGAGCA...GTGGCCTTGTGCTGTCCATACCCCAGCAGCCTGGGATGCCACATCAGGTGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR GCA 90 bp | GATGGCCACAGTATCACTGTCCTGGGCTTTCTTTCATCCCAAAGACTTCCTTCTGACTGGAGCCTGGCTTaGTCTGGGCTCCCCCGGATC | + |
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Preference number: 2 (lower is better) Translates to: DGHSITVLGFLSSQRLPSDWSLA*SGLPRI Trigger: GATCCGGGGGAGCCCAGAGCAAGCCAGGCTCCAGTC...AGAAGGAAGTCTTTGGGATGAAAGAAAGCCCAGGACAGTGATACTGTGGCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTCGACAGTTTTTCCACCAGTCAGTGGTGCTCAGCAGGTGTTTGGGAGGGCAGGGAAGAGGGCTATTTaGTCACTCTGTGGCAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SSTVFPPVSGAQQVFGRAGKRAI*SLCGSE Trigger: CTCACTGCCACAGAGTGAGCAAATAGCCCTCTTCCC...TGCCCTCCCAAACACCTGCTGAGCACCACTGACTGGTGGAAAAACTGTCGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTCGACAGTTTTTCCACCAGTCAGTGGTGCTCAGCAGGTGTTTGGGAGGGCACTTATAGCATCTCCCTaGCCAGCCCTAGGAGCAATG | + |
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Preference number: 2 (lower is better) Translates to: SSTVFPPVSGAQQVFGRALIASP*PALGAM Trigger: CATTGCTCCTAGGGCTGGGCAGGGAGATGCTATAAG...TGCCCTCCCAAACACCTGCTGAGCACCACTGACTGGTGGAAAAACTGTCGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGCACTGTTTTTAAGGCAGAGGAGAGTCAACGATTTGCAGCCAGCCCTGGGATTTGGGAGGGCAAGATaGGAAAGGGGGTGCATGATG | + |
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Preference number: 2 (lower is better) Translates to: RALFLRQRRVNDLQPALGFGRAR*ERGCMM Trigger: CATCATGCACCCCCTTTCCCATCTTGCCCTCCCAAA...TCCCAGGGCTGGCTGCAAATCGTTGACTCTCCTCTGCCTTAAAAACAGTGCCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTCAGACCTGTGGTTCCTTATCCCAGGGGCTGAAAGTCCCTATAAAGGTCACGGCATCCCAGGCTGCTaGGGTATGGACAGCACAAGG | + |
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Preference number: 2 (lower is better) Translates to: ISDLWFLIPGAESPYKGHGIPGC*GMDSTR Trigger: CCTTGTGCTGTCCATACCCCAGCAGCCTGGGATGCC...GTGACCTTTATAGGGACTTTCAGCCCCTGGGATAAGGAACCACAGGTCTGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGCACTGTTTTTAAGGCAGAGGAGAGTCAACGATTTGCAGCCAGCCCTGGGAGAGGAGCAGAGGCACTaGGCTCTGAGTCTACAGTTA | + |
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Preference number: 2 (lower is better) Translates to: RALFLRQRRVNDLQPALGEEQRH*ALSLQL Trigger: TAACTGTAGACTCAGAGCCCAGTGCCTCTGCTCCTC...TCCCAGGGCTGGCTGCAAATCGTTGACTCTCCTCTGCCTTAAAAACAGTGCCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGAGTCAACGATTTGCAGCCAGCCCTGGGAAGCACACAGCACTGGGTAAACAGATGGGAAAGGGGGTaGATGATGCTAAAGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: RRVNDLQPALGSTQHWVNRWERG*MMLKAR Trigger: CCTTGCCTTTAGCATCATGCACCCCCTTTCCCATCT...GTTTACCCAGTGCTGTGTGCTTCCCAGGGCTGGCTGCAAATCGTTGACTCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR TCA 90 bp | CACTGGGGACATTCCCTCACCCAAGCTTCCCCAATTCTTCTCAGAGGCTACGTTACCAGCCTAGAAAGATaGCAGCAGCCACATCCATCT | + |
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Preference number: 2 (lower is better) Translates to: HWGHSLTQASPILLRGYVTSLER*QQPHPS Trigger: AGATGGATGTGGCTGCTGTCATCTTTCTAGGCTGGT...AACGTAGCCTCTGAGAAGAATTGGGGAAGCTTGGGTGAGGGAATGTCCCCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR TCA 90 bp | GATGGCCACAGTATCACTGTCCTGGGCTTTCTTTCATCCCAAAGACTTCCTTCTCTCACTCTGTGGCAGTaGGAGGGAATGCATGGGACA | + |
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Preference number: 2 (lower is better) Translates to: DGHSITVLGFLSSQRLPSLTLWQ*EGMHGT Trigger: TGTCCCATGCATTCCCTCTCACTGCCACAGAGTGAG...AGAAGGAAGTCTTTGGGATGAAAGAAAGCCCAGGACAGTGATACTGTGGCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR CAA 90 bp | ATTGTCTCCCACTTCTTCCCTCTGCAGCTTCTGACTTGCCTGACATaGCACACACACACACACACACACACACACACACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: IVSHFFPLQLLTCLT*HTHTHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAATGTCAGGCAAGTCAGAAGCTGCAGAGGGAAGAAGTGGGAGACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCGTGACTACAGGCAGGAAGAAGAAACCGTCCTGGAACTCTCTTGGGGGAACTCACTGAATTGGAGATaGGAAGCAGATGCAGGTACT | + |
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Preference number: 2 (lower is better) Translates to: TRDYRQEEETVLELSWGNSLNWR*EADAGT Trigger: AGTACCTGCATCTGCTTCTCATCTCCAATTCAGTGA...GTTCCCCCAAGAGAGTTCCAGGACGGTTTCTTCTTCCTGCCTGTAGTCACGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR GCA 90 bp | GATGGCCACAGTATCACTGTCCTGGGCTTTCTTTCATCCCAAAGACTTCCTTCTCTGCAGCTTCTGACTTaGCTGACATTGCACACACAC | + |
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Preference number: 2 (lower is better) Translates to: DGHSITVLGFLSSQRLPSLQLLT*LTLHTH Trigger: GTGTGTGTGCAATGTCAGGCAAGTCAGAAGCTGCAG...AGAAGGAAGTCTTTGGGATGAAAGAAAGCCCAGGACAGTGATACTGTGGCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTTCTTGTCCCACTAATTCACATGGAGAGATGGCCACAGTATCACTGTCCTGGAGAGCACACTGCTaGTACCCATTCCAGAAATCC | + |
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Preference number: 2 (lower is better) Translates to: TASCPTNSHGEMATVSLSWRAHC*YPFQKS Trigger: GGATTTCTGGAATGGGTAGCAGCAGTGTGCTCTCCA...GGACAGTGATACTGTGGCCATCTCTCCATGTGAATTAGTGGGACAAGAAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGCTTCTTGTCCCACTAATTCACATGGAGAGATGGCCACAGTATCACTGTCCGCTGCAAAGAGAATGTaGCCTAGCCTACAGTCACCT | + |
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Preference number: 2 (lower is better) Translates to: TASCPTNSHGEMATVSLSAAKRM*PSLQSP Trigger: AGGTGACTGTAGGCTAGGCCACATTCTCTTTGCAGC...GGACAGTGATACTGTGGCCATCTCTCCATGTGAATTAGTGGGACAAGAAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGCCACAGTATCACTGTCCTGGGCTTTCTTTCATCCCAAAGACTTCCTTCTACACTGGAGAGCACACTaGTGCTACCCATTCCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: MATVSLSWAFFHPKDFLLHWRAH*CYPFQK Trigger: TTTCTGGAATGGGTAGCAGCAGTGTGCTCTCCAGTG...TAGAAGGAAGTCTTTGGGATGAAAGAAAGCCCAGGACAGTGATACTGTGGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGACCTTACCCATGACTCCATATCATCAGACCAGCCTAGAAAGATGACAGCAGAGATGAGAAGCAGATaGAGGTACTTTCTCGGGATG | + |
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Preference number: 2 (lower is better) Translates to: SDLTHDSISSDQPRKMTAEMRSR*RYFLGM Trigger: CATCCCGAGAAAGTACCTGCATCTGCTTCTCATCTC...TGCTGTCATCTTTCTAGGCTGGTCTGATGATATGGAGTCATGGGTAAGGTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGCAGCCAGCCCTGGGAAGCACACAGCACTGGGTAAACCTCATTATCTGCAACTTCTCCCCTTTAAATaGAAGCTAGTCTACATAGCT | + |
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Preference number: 2 (lower is better) Translates to: FAASPGKHTALGKPHYLQLLPFK*KLVYIA Trigger: AGCTATGTAGACTAGCTTGCATTTAAAGGGGAGAAG...TTGCAGATAATGAGGTTTACCCAGTGCTGTGTGCTTCCCAGGGCTGGCTGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAAAATATATTTTACTACAGCTTCTTGTCCCACTAATTCACATGGAGAGATGGAGCCTGGCTTGCTCTaGGCTCCCCCGGATCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: TKIYFTTASCPTNSHGEMEPGLL*APPDQS Trigger: GCTTTGATCCGGGGGAGCCCAGAGCAAGCCAGGCTC...CATCTCTCCATGTGAATTAGTGGGACAAGAAGCTGTAGTAAAATATATTTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR-3UTR TCA 90 bp | CACATGGAAATGCAGAATTTAAAGAGCCCGGTTAGGGAGCTTCTCCTAATTAAACCAGAAGAATACAGCTaGGAGTTTTCTCTCAAATGT | + |
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Preference number: 2 (lower is better) Translates to: HMEMQNLKSPVRELLLIKPEEYS*EFSLKC Trigger: ACATTTGAGAGAAAACTCTCAGCTGTATTCTTCTGG...TTTAATTAGGAGAAGCTCCCTAACCGGGCTCTTTAAATTCTGCATTTCCATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR TCA 72 bp | TCCCCAGCCTTTGAGGCCAACCTACAGCCTCCAGCATaGGGAGTGACTCCCAGCCCTGATGGGTGGCCACAT | + |
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Preference number: 3 (lower is better) Translates to: SPAFEANLQPPA*GVTPSPDGWPH Trigger: ATGTGGCCACCCATCAGGGCTGGGAGTCACTCCTCATGCTGGAGGCTGTAGGTTGGCCTCAAAGGCTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR GCA 72 bp | GAGCAGAGGCACTGGGCTCTGAGTCTACAGTTACCTTaGCAAACACCTGATGTGGCATCCCAGGCTGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: EQRHWALSLQLP*QTPDVASQAAG Trigger: CCCAGCAGCCTGGGATGCCACATCAGGTGTTTGGCAAGGTAACTGTAGACTCAGAGCCCAGTGCCTCTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR CCA 72 bp | CCTACAGTCACCTCTGGGCCGTGGCAAGCCTGGCTGTaGCTATCCTCAGAACTTCTCTGTGTCTCTCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: PTVTSGPWQAWL*LSSELLCVSPG Trigger: ACCTGGAGAGACACAGAGAAGTTCTGAGGATAGCCACAGCCAGGCTTGCCACGGCCCAGAGGTGACTGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR CCA 72 bp | CTGCAAAGAGAATGTGGCCTAGCCTACAGTCACCTCTaGGCCGTGGCAAGCCTGGCTGTGGCTATCCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LQRECGLAYSHL*AVASLAVAILR Trigger: TCTGAGGATAGCCACAGCCAGGCTTGCCACGGCCCAGAGGTGACTGTAGGCTAGGCCACATTCTCTTTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR CCA 72 bp | ATAGCACCACTGACAGGACTGGAGCCTGGCTTGCTCTaGGCTCCCCCGGATCAAAGCCATCACATCCATTGC | + |
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Preference number: 3 (lower is better) Translates to: IAPLTGLEPGLL*APPDQSHHIHC Trigger: GCAATGGATGTGATGGCTTTGATCCGGGGGAGCCCAGAGCAAGCCAGGCTCCAGTCCTGTCAGTGGTGCTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR TCA 72 bp | CTGGGCTCTGAGTCTACAGTTACCTTGCCAAACACCTaGTGTGGCATCCCAGGCTGCTGGGGTATGGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LGSESTVTLPNT*CGIPGCWGMDS Trigger: GCTGTCCATACCCCAGCAGCCTGGGATGCCACATCAGGTGTTTGGCAAGGTAACTGTAGACTCAGAGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR GCA 72 bp | AGGGCTATTTGCTCACTCTGTGGCAGTGAGAGGGAATaGATGGGACAAGCCCAAGCCACAGGGACAGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: RAICSLCGSERE*MGQAQATGTAT Trigger: AGTGGCTGTCCCTGTGGCTTGGGCTTGTCCCATGCATTCCCTCTCACTGCCACAGAGTGAGCAAATAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR GCA 72 bp | CCAAGTCCCTGTAGATGGAGCCATCTAACCCTCAGCTaGTCTCACTGGGGACATTCCCTCACCCAAGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PSPCRWSHLTLS*SHWGHSLTQAS Trigger: GGAAGCTTGGGTGAGGGAATGTCCCCAGTGAGAGCAGCTGAGGGTTAGATGGCTCCATCTACAGGGACTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR CCA 72 bp | GTCAGTGGTGCTCAGCAGGTGTTTGGGAGGGCAAGATaGGAAAGGGGGTGCATGATGCTAAAGGCAAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VSGAQQVFGRAR*ERGCMMLKARP Trigger: TGGCCTTGCCTTTAGCATCATGCACCCCCTTTCCCATCTTGCCCTCCCAAACACCTGCTGAGCACCACTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR TCA 72 bp | GTCTACATAGCTGCTGTTTGGGGATTCCCCAGCCTTTaGGGCCAACCTACAGCCTCCAGCATGAGGAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: VYIAAVWGFPSL*GQPTASSMRSD Trigger: GTCACTCCTCATGCTGGAGGCTGTAGGTTGGCCTCAAAGGCTGGGGAATCCCCAAACAGCAGCTATGTAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR GCA 72 bp | GCAAGGCCACTGAGCGAGCACTGGAGAGCACACTGCTaGTACCCATTCCAGAAATCCCCTGTAGATATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: ARPLSEHWRAHC*YPFQKSPVDIL Trigger: GAGGATATCTACAGGGGATTTCTGGAATGGGTAGCAGCAGTGTGCTCTCCAGTGCTCGCTCAGTGGCCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR TCA 72 bp | GATAGGGCATGGATGCAGAGCGATGGTCTGGAATGCTaGCTCGTGACTACAGGCAGGAAGAAGAAACCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: DRAWMQSDGLEC*LVTTGRKKKPS Trigger: GGACGGTTTCTTCTTCCTGCCTGTAGTCACGAGTCAGCATTCCAGACCATCGCTCTGCATCCATGCCCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR GCA 72 bp | TGTCTCTCCAGGTGGAGACTAGGGAAGAGGGCTATTTaGTCACTCTGTGGCAGTGAGAGGGAATGCATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: CLSRWRLGKRAI*SLCGSERECMG Trigger: TCCCATGCATTCCCTCTCACTGCCACAGAGTGAGCAAATAGCCCTCTTCCCTAGTCTCCACCTGGAGAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR GCA 72 bp | AAGGCAAGGCCACTGAGCGAGCACTGGAGAGCACACTaGTGCTACCCATTCCAGAAATCCCCTGTAGATATC | + |
|
Preference number: 3 (lower is better) Translates to: KARPLSEHWRAH*CYPFQKSPVDI Trigger: GATATCTACAGGGGATTTCTGGAATGGGTAGCAGCAGTGTGCTCTCCAGTGCTCGCTCAGTGGCCTTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGTCCCTATAAAGGTCACCTGCCTCACAGCCTCCACTTAGGGTCCCCAGAAAAGCCATCACATCCATaGCCAGAGCACCAGACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ESPYKGHLPHSLHLGSPEKPSHP*PEHQTL Trigger: CAAGGTCTGGTGCTCTGGCAATGGATGTGATGGCTT...TTCTGGGGACCCTAAGTGGAGGCTGTGAGGCAGGTGACCTTTATAGGGACTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR TCA 72 bp | CATGGATGCAGAGCGATGGTCTGGAATGCTGACTCGTaGCTACAGGCAGGAAGAAGAAACCGTCCTGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: HGCRAMVWNADS*LQAGRRNRPGT Trigger: AGTTCCAGGACGGTTTCTTCTTCCTGCCTGTAGTCACGAGTCAGCATTCCAGACCATCGCTCTGCATCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR TCA 72 bp | AGTAGACTGTCTCAGAGGAGCAGAGGCACTGGGCTCTaGGTCTACAGTTACCTTGCCAAACACCTGATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SRLSQRSRGTGL*VYSYLAKHLMW Trigger: CCACATCAGGTGTTTGGCAAGGTAACTGTAGACTCAGAGCCCAGTGCCTCTGCTCCTCTGAGACAGTCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR CCA 72 bp | TGTAGATGGAGCCATCTAACCCTCAGCTGCTCTCACTaGGGACATTCCCTCACCCAAGCTTCCCCAATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: CRWSHLTLSCSH*GHSLTQASPIL Trigger: AAGAATTGGGGAAGCTTGGGTGAGGGAATGTCCCCAGTGAGAGCAGCTGAGGGTTAGATGGCTCCATCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR CCA 72 bp | CACTTCCCTGTAAGAGTACTTCCAAGTCCCTGTAGATaGAGCCATCTAACCCTCAGCTGCTCTCACTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HFPVRVLPSPCR*SHLTLSCSHWG Trigger: TCCCCAGTGAGAGCAGCTGAGGGTTAGATGGCTCCATCTACAGGGACTTGGAAGTACTCTTACAGGGAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGTCCCTATAAAGGTCACCTGCCTCACAGCCTCCACTTAGGGTCCCCAGAATCTGCAGCTTCTGACTaGCCTGACATTGCACACACA | + |
|
Preference number: 3 (lower is better) Translates to: ESPYKGHLPHSLHLGSPESAASD*PDIAHT Trigger: TGTGTGTGCAATGTCAGGCAAGTCAGAAGCTGCAGA...TTCTGGGGACCCTAAGTGGAGGCTGTGAGGCAGGTGACCTTTATAGGGACTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR TCA 72 bp | CAAAGCCATCACATCCATTGCCAGAGCACCAGACCTTaGGCTGCAAAGAGAATGTGGCCTAGCCTACAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: QSHHIHCQSTRP*AAKRMWPSLQS Trigger: TGACTGTAGGCTAGGCCACATTCTCTTTGCAGCTCAAGGTCTGGTGCTCTGGCAATGGATGTGATGGCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR CCA 72 bp | GTGGCTATCCTCAGAACTTCTCTGTGTCTCTCCAGGTaGAGACTAGGGAAGAGGGCTATTTGCTCACTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VAILRTSLCLSR*RLGKRAICSLC Trigger: ACAGAGTGAGCAAATAGCCCTCTTCCCTAGTCTCCACCTGGAGAGACACAGAGAAGTTCTGAGGATAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR TCA 72 bp | AGTCTCCGGTTCTCCCTGCTTTCACTGAATTGGAGATaGGAAGCAGATGCAGGTACTTTCTCGGGATGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SLRFSLLSLNWR*EADAGTFSGCF Trigger: GAAGCATCCCGAGAAAGTACCTGCATCTGCTTCTCATCTCCAATTCAGTGAAAGCAGGGAGAACCGGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR TCA 72 bp | CCAGCTCCAACAGTCTCCGGTTCTCCCTGCTTTCACTaGATTGGAGATGAGAAGCAGATGCAGGTACTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PAPTVSGSPCFH*IGDEKQMQVLS Trigger: AGAAAGTACCTGCATCTGCTTCTCATCTCCAATTCAGTGAAAGCAGGGAGAACCGGAGACTGTTGGAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR GCA 72 bp | CTGGGAAGCACACAGCACTGGGTAAACCTCATTATCTaGAAACTGAATTGGACACTAGAGGAAGATCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LGSTQHWVNLII*KLNWTLEEDLG Trigger: ACCCAGATCTTCCTCTAGTGTCCAATTCAGTTTGCAGATAATGAGGTTTACCCAGTGCTGTGTGCTTCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR CCA 72 bp | CTACAGCTTCTTGTCCCACTAATTCACATGGAGAGATaGCCACAGTATCACTGTCCTGGGCTTTCTTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: LQLLVPLIHMER*PQYHCPGLSFI Trigger: GATGAAAGAAAGCCCAGGACAGTGATACTGTGGCCATCTCTCCATGTGAATTAGTGGGACAAGAAGCTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR CCA 72 bp | CAGCACTGGGTAAACCTCATTATCTGCAAACTGAATTaGACACTAGAGGAAGATCTGGGTTCGGTGAGCGAT | + |
|
Preference number: 3 (lower is better) Translates to: QHWVNLIICKLN*TLEEDLGSVSD Trigger: ATCGCTCACCGAACCCAGATCTTCCTCTAGTGTCCAATTCAGTTTGCAGATAATGAGGTTTACCCAGTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCGACAGTTTTTCCACCAGTCAGTGGTGCTCAGCAGGTGTTTGGGAGGGCACCACCACGCCCAGGGTaGTGCCCACGGCCACGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSTVFPPVSGAQQVFGRAPPRPG*CPRPRH Trigger: GTGGCGTGGCCGTGGGCATCACCCTGGGCGTGGTGG...TGCCCTCCCAAACACCTGCTGAGCACCACTGACTGGTGGAAAAACTGTCGAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR CCA 90 bp | CACCTGATGTGGCATCCCAGGCTGCTGGGGTATGGACAGCACAAGGCCACGCCCGTGTGCCACAAAGCTTaGGTGGGGGCACGGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: HLMWHPRLLGYGQHKATPVCHKA*VGARGI Trigger: TATCCCCCGTGCCCCCACCCAAGCTTTGTGGCACAC...GGGCGTGGCCTTGTGCTGTCCATACCCCAGCAGCCTGGGATGCCACATCAGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR CCA 90 bp | TCACCTGCCTCACAGCCTCCACTTAGGGTCCCCAGAAGCGTCTCGTGCCAGCCTATCCACCACAGCGACTaGTCCTGCAGCCTCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SPASQPPLRVPRSVSCQPIHHSD*SCSLCS Trigger: CGAGCAGAGGCTGCAGGACCAGTCGCTGTGGTGGAT...AGGCTGGCACGAGACGCTTCTGGGGACCCTAAGTGGAGGCTGTGAGGCAGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAGAGGAGAGTCAACGATTTGCAGCCAGCCCTGGGAAGCACACAGCACTGGCACCGCCAAGGAGCCTaGCACAACACCGGCCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: RQRRVNDLQPALGSTQHWHRQGA*HNTGHV Trigger: TACGTGGCCGGTGTTGTGGCAGGCTCCTTGGCGGTG...CCAGTGCTGTGTGCTTCCCAGGGCTGGCTGCAAATCGTTGACTCTCCTCTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR TCA 90 bp | GGGCAAGAAAAAGGCCTGGAGCTTATAGCATCTCCCTGCCCAGCCCTAGGAGCATCTGCTCGTAATTTCTaGGAACCACCACGCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQEKGLELIASPCPALGASARNF*EPPRPG Trigger: CCCTGGGCGTGGTGGTTCTCAGAAATTACGAGCAGA...TGCTCCTAGGGCTGGGCAGGGAGATGCTATAAGCTCCAGGCCTTTTTCTTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCTTCTTGTCCCACTAATTCACATGGAGAGATGGCCACAGTATCACTGTCCGCTCCAGCTCCTCGATaGGCTCAGCCTCCGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TASCPTNSHGEMATVSLSAPAPR*AQPPRR Trigger: CCTGCGCGGAGGCTGAGCGCATCGAGGAGCTGGAGC...GGACAGTGATACTGTGGCCATCTCTCCATGTGAATTAGTGGGACAAGAAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR GCA 90 bp | GCTATTTGCTCACTCTGTGGCAGTGAGAGGGAATGCATGGGACAAGCCCAAGCCCCTTGCTGCTCAGCCTaGGGTTTCCCTGAAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: AICSLCGSERECMGQAQAPCCSA*GFPEGW Trigger: CCATCCTTCAGGGAAACCGCAGGCTGAGCAGCAAGG...GGCTTGGGCTTGTCCCATGCATTCCCTCTCACTGCCACAGAGTGAGCAAATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR CCA 90 bp | GCTATTTGCTCACTCTGTGGCAGTGAGAGGGAATGCATGGGACAAGCCCAAGCCGGTTTCCCTGAAGGATaGCCTGGCGGAAGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AICSLCGSERECMGQAQAGFPEG*PGGSCW Trigger: CCAACAGCTTCCGCCAGGCCATCCTTCAGGGAAACC...GGCTTGGGCTTGTCCCATGCATTCCCTCTCACTGCCACAGAGTGAGCAAATAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAGAGGAGAGTCAACGATTTGCAGCCAGCCCTGGGAAGCACACAGCACTGGACAATGTTGGCTAGGTaGGCAGAGACGAGCGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: RQRRVNDLQPALGSTQHWTMLAR*AETSAY Trigger: GTATGCGCTCGTCTCTGCCCACCTAGCCAACATTGT...CCAGTGCTGTGTGCTTCCCAGGGCTGGCTGCAAATCGTTGACTCTCCTCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR GCA 90 bp | ACTCGTGACTACAGGCAGGAAGAAGAAACCGTCCTGGAACTCTCTTGGGGGAACGCAGATCTGCCCATCTaGATGGCTGTCTGCGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TRDYRQEEETVLELSWGNADLPI*MAVCES Trigger: GCTCTCGCAGACAGCCATGCAGATGGGCAGATCTGC...GTTCCCCCAAGAGAGTTCCAGGACGGTTTCTTCTTCCTGCCTGTAGTCACGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR CCA 90 bp | ACTCGTGACTACAGGCAGGAAGAAGAAACCGTCCTGGAACTCTCTTGGGGGAACATCTGCCCATCTGCATaGCTGTCTGCGAGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRDYRQEEETVLELSWGNICPSA*LSARAR Trigger: CCTGGCTCTCGCAGACAGCCATGCAGATGGGCAGAT...GTTCCCCCAAGAGAGTTCCAGGACGGTTTCTTCTTCCTGCCTGTAGTCACGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR CCA 90 bp | GCTATTTGCTCACTCTGTGGCAGTGAGAGGGAATGCATGGGACAAGCCCAAGCCCAAGCCCAATTCGGGTaGCTCCATGCACCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AICSLCGSERECMGQAQAQAQFG*LHAPSP Trigger: TGGAGATGGTGCATGGAGCCACCCGAATTGGGCTTG...GGCTTGGGCTTGTCCCATGCATTCCCTCTCACTGCCACAGAGTGAGCAAATAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR CAA 72 bp | GCTCTGGGCTCCCCCGGATCAAAGCCATCACATCCATaGCCAGAGCACCAGACCTTGAGCTGCAAAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALGSPGSKPSHP*PEHQTLSCKEN Trigger: ATTCTCTTTGCAGCTCAAGGTCTGGTGCTCTGGCAATGGATGTGATGGCTTTGATCCGGGGGAGCCCAGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR CAA 72 bp | CGGGCACTGTTTTTAAGGCAGAGGAGAGTCAACGATTaGCAGCCAGCCCTGGGAAGCACACAGCACTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RALFLRQRRVND*QPALGSTQHWV Trigger: TACCCAGTGCTGTGTGCTTCCCAGGGCTGGCTGCAAATCGTTGACTCTCCTCTGCCTTAAAAACAGTGCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCATCACATCCATTGCCAGAGCACCAGACCTTGAGCTGCAAAGAGAATGTAGCCTGCGGTTTCCCTaGAGGATGGCCTGGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KAITSIARAPDLELQRECSLRFP*RMAWRK Trigger: CTTCCGCCAGGCCATCCTTCAGGGAAACCGCAGGCT...ACATTCTCTTTGCAGCTCAAGGTCTGGTGCTCTGGCAATGGATGTGATGGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCGACAGTTTTTCCACCAGTCAGTGGTGCTCAGCAGGTGTTTGGGAGGGCATGTCATAGTACCACTTaGGGTCAATCTCCCGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTVFPPVSGAQQVFGRACHSTT*GQSPGA Trigger: TGCCCCGGGAGATTGACCGCAAGTGGTACTATGACA...TGCCCTCCCAAACACCTGCTGAGCACCACTGACTGGTGGAAAAACTGTCGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCTCCAACAGTCTCCGGTTCTCCCTGCTTTCACTGAATTGGAGATGAGATACCAGCAGCTGCAGTaGCACATTGAGTCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQLQQSPVLPAFTELEMRYQQLQ*HIESQL Trigger: CAGCTGGGACTCAATGTGGCACTGCAGCTGCTGGTA...TCTCATCTCCAATTCAGTGAAAGCAGGGAGAACCGGAGACTGTTGGAGCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR GCA 90 bp | CGGATCAAAGCCATCACATCCATTGCCAGAGCACCAGACCTTGAGCTGCAAAGAACCCCTACCAGCAGCTaGAGTGCCACATTGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RIKAITSIARAPDLELQRTPTSS*SATLSP Trigger: GGGACTCAATGTGGCACTGCAGCTGCTGGTAGGGGT...TCTTTGCAGCTCAAGGTCTGGTGCTCTGGCAATGGATGTGATGGCTTTGATCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACAAAACCCTGTCTCCACACCCAAAGAGACACGCCACCCAAGTGTaGCACAAAGCTTGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHKTLSPHPKRHATQV*HKAWVG Trigger: CCCCACCCAAGCTTTGTGGCACACTTGGGTGGCGTG...TCTCTTTGGGTGTGGAGACAGGGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR CCA 90 bp | TCACCTGCCTCACAGCCTCCACTTAGGGTCCCCAGAAGCGTCTCGTGCCAGCCTCAAACAGCACGAAGATaGTGTACATGGTCACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPASQPPLRVPRSVSCQPQTARR*CTWSQR Trigger: TCTTTGTGACCATGTACACCATCTTCGTGCTGTTTG...AGGCTGGCACGAGACGCTTCTGGGGACCCTAAGTGGAGGCTGTGAGGCAGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR TCA 90 bp | GGGCAAGAAAAAGGCCTGGAGCTTATAGCATCTCCCTGCCCAGCCCTAGGAGCACTGGCACTTCATGCCTaGCCAGTTCATGACAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GQEKGLELIASPCPALGALALHA*PVHDNV Trigger: AACATTGTCATGAACTGGTCAGGCATGAAGTGCCAG...TGCTCCTAGGGCTGGGCAGGGAGATGCTATAAGCTCCAGGCCTTTTTCTTGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACACACACACACACAAAACCCTGTCTCCACACCCAAAGAGACCATCCGCAGCAGCTTaGACTGGCACTTCATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHKTLSPHPKRPSAAA*TGTSCL Trigger: CAGGCATGAAGTGCCAGTTCAAGCTGCTGCGGATGG...TCTCTTTGGGTGTGGAGACAGGGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCCATCACATCCATTGCCAGAGCACCAGACCTTGAGCTGCAAAGAGAATGTATCTGCATGGCTGTCTaGGAGAGCCAGGAGCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAITSIARAPDLELQRECICMAV*ESQEHL Trigger: GAGGTGCTCCTGGCTCTCGCAGACAGCCATGCAGAT...ACATTCTCTTTGCAGCTCAAGGTCTGGTGCTCTGGCAATGGATGTGATGGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTCTTGGGGGAACCTGGGATGAAGAAAGTCATTACCTCAGCACAGGGCCCTCCTGGCGGAAGCTGTTaGAACGTTTGTTGCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TLLGEPGMKKVITSAQGPPGGSC*NVCCSS Trigger: TGATGAGCAACAAACGTTCCAACAGCTTCCGCCAGG...AGGGCCCTGTGCTGAGGTAATGACTTTCTTCATCCCAGGTTCCCCCAAGAGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCCACAGTATCACTGTCCTGGGCTTTCTTTCATCCCAAAGACTTCCTTCTAATTCGGGTGGCTCCATaGACCATCTCCAGGGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: MATVSLSWAFFHPKDFLLIRVAP*TISRGT Trigger: GGTACCCCTGGAGATGGTGCATGGAGCCACCCGAAT...TAGAAGGAAGTCTTTGGGATGAAAGAAAGCCCAGGACAGTGATACTGTGGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTCTTGTCCCACTAATTCACATGGAGAGATGGCCACAGTATCACTGTCCCGCAGCAGCTTGAACTaGCACTTCATGCCTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TASCPTNSHGEMATVSLSRSSLN*HFMPDQ Trigger: CTGGTCAGGCATGAAGTGCCAGTTCAAGCTGCTGCG...GGACAGTGATACTGTGGCCATCTCTCCATGTGAATTAGTGGGACAAGAAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
||
| 3UTR CAA 72 bp | CTCCAACAGTCTCCGGTTCTCCCTGCTTTCACTGAATaGGAGATGAGAAGCAGATGCAGGTACTTTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQQSPVLPAFTE*EMRSRCRYFLG Trigger: CCCGAGAAAGTACCTGCATCTGCTTCTCATCTCCAATTCAGTGAAAGCAGGGAGAACCGGAGACTGTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS-3UTR GCA 90 bp | AAAGCCATCACATCCATTGCCAGAGCACCAGACCTTGAGCTGCAAAGAGAATGTAGAGCCCACAACAGGTaGAGTCATGTCAGCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: KAITSIARAPDLELQRECRAHNR*SHVSHR Trigger: TCTGTGGCTGACATGACTGCACCTGTTGTGGGCTCT...ACATTCTCTTTGCAGCTCAAGGTCTGGTGCTCTGGCAATGGATGTGATGGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR CAA 72 bp | CTACAGGCAGGAAGAAGAAACCGTCCTGGAACTCTCTaGGGGGAACCTGGGATGAAGAAAGTCATTACCTCA | + |
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Preference number: 4 (lower is better) Translates to: LQAGRRNRPGTL*GEPGMKKVITS Trigger: TGAGGTAATGACTTTCTTCATCCCAGGTTCCCCCAAGAGAGTTCCAGGACGGTTTCTTCTTCCTGCCTGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS-3UTR TCA 90 bp | ATGGCCACAGTATCACTGTCCTGGGCTTTCTTTCATCCCAAAGACTTCCTTCTACCACCCCTGCATGCATaGAGATGTACGTCACATAGC | + |
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Preference number: 4 (lower is better) Translates to: MATVSLSWAFFHPKDFLLPPLHA*RCTSHS Trigger: GCTATGTGACGTACATCTTCATGCATGCAGGGGTGG...TAGAAGGAAGTCTTTGGGATGAAAGAAAGCCCAGGACAGTGATACTGTGGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACAAAACCCTGTCTCCACACCCAAAGAGATGTTCCACCCCTGCATaGATGAAGATGTACGTCACA | + |
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Preference number: 4 (lower is better) Translates to: HTHTHTHTHKTLSPHPKRCSTPA*MKMYVT Trigger: TGTGACGTACATCTTCATGCATGCAGGGGTGGAACA...TCTCTTTGGGTGTGGAGACAGGGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| 3UTR CAA 72 bp | ACAGCACTGGGTAAACCTCATTATCTGCAAACTGAATaGGACACTAGAGGAAGATCTGGGTTCGGTGAGCGA | + |
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Preference number: 4 (lower is better) Translates to: TALGKPHYLQTE*DTRGRSGFGER Trigger: TCGCTCACCGAACCCAGATCTTCCTCTAGTGTCCAATTCAGTTTGCAGATAATGAGGTTTACCCAGTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS-3UTR CCA 90 bp | ACCAAAATATATTTTACTACAGCTTCTTGTCCCACTAATTCACATGGAGAGATGTCCAGCTTAGAGCTGTaGCTCTCCAGGAGGCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: TKIYFTTASCPTNSHGEMSSLEL*LSRRLR Trigger: CCGGAGCCTCCTGGAGAGCCACAGCTCTAAGCTGGA...CATCTCTCCATGTGAATTAGTGGGACAAGAAGCTGTAGTAAAATATATTTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS GCA 90 bp | AACCACCACGCCCAGGGTGATGCCCACGGCCACGCCACCCAAGTGTaGCACAAAGCTTGGGTGGGGGCACGGGGGATAAGCCGATGGGTG | + |
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Preference number: 5 (lower is better) Translates to: NHHAQGDAHGHATQV*HKAWVGARGISRWV Trigger: CACCCATCGGCTTATCCCCCGTGCCCCCACCCAAGCTTTGTGGCACACTTGGGTGGCGTGGCCGTGGGCATCACCCTGGGCGTGGTGGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS-3UTR CAA 90 bp | TCACCTGCCTCACAGCCTCCACTTAGGGTCCCCAGAAGCGTCTCGTGCCAGCCTTCCTCCAGCAGGGCCTaGCTGCTCAGCCTGCGGTTT | + |
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Preference number: 5 (lower is better) Translates to: SPASQPPLRVPRSVSCQPSSSRA*LLSLRF Trigger: AAACCGCAGGCTGAGCAGCAAGGCCCTGCTGGAGGA...AGGCTGGCACGAGACGCTTCTGGGGACCCTAAGTGGAGGCTGTGAGGCAGGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS GCA 90 bp | GGCAGAGACGAGCGCATACACCCCTCCGGAAGAGCCCACAACAGGTaGAGTCATGTCAGCCACAGACACCGCCAAGGAGCCTGCCACAAC | + |
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Preference number: 5 (lower is better) Translates to: GRDERIHPSGRAHNR*SHVSHRHRQGACHN Trigger: GTTGTGGCAGGCTCCTTGGCGGTGTCTGTGGCTGACATGACTGCACCTGTTGTGGGCTCTTCCGGAGGGGTGTATGCGCTCGTCTCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS-3UTR CAA 90 bp | CACCTGATGTGGCATCCCAGGCTGCTGGGGTATGGACAGCACAAGGCCACGCCCAGCTGCAGTGCCACATaGAGTCCCAGCTGTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: HLMWHPRLLGYGQHKATPSCSAT*SPSCST Trigger: GGTGGAACAGCTGGGACTCAATGTGGCACTGCAGCT...GGGCGTGGCCTTGTGCTGTCCATACCCCAGCAGCCTGGGATGCCACATCAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS-3UTR CAA 90 bp | CTGGCTTGCTCTGGGCTCCCCCGGATCAAAGCCATCACATCCATTGCCAGAGCAGCCATCCGCAGCAGCTaGAACTGGCACTTCATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LACSGLPRIKAITSIARAAIRSS*NWHFMP Trigger: AGGCATGAAGTGCCAGTTCAAGCTGCTGCGGATGGC...TGCTCTGGCAATGGATGTGATGGCTTTGATCCGGGGGAGCCCAGAGCAAGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS CCA 90 bp | ATCTGCATGGCTGTCTGCGAGAGCCAGGAGCACCTCCTTTTTGTGTaGGTCCAGCTTAGAGCTGTGGCTCTCCAGGAGGCTCCGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: ICMAVCESQEHLLFV*VQLRAVALQEAPEL Trigger: AAGTTCCGGAGCCTCCTGGAGAGCCACAGCTCTAAGCTGGACCCACACAAAAAGGAGGTGCTCCTGGCTCTCGCAGACAGCCATGCAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS CCA 90 bp | CAAGTGTGCCACAAAGCTTGGGTGGGGGCACGGGGGATAAGCCGATaGGTGGAAACGGAGCCATACAGCCCTTCCGAACTCCATACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QVCHKAWVGARGISR*VETEPYSPSELHTH Trigger: ATGAGTATGGAGTTCGGAAGGGCTGTATGGCTCCGTTTCCACCCATCGGCTTATCCCCCGTGCCCCCACCCAAGCTTTGTGGCACACTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS-3UTR CAA 90 bp | ACTCGTGACTACAGGCAGGAAGAAGAAACCGTCCTGGAACTCTCTTGGGGGAACAGTGTGCCACAAAGCTaGGGTGGGGGCACGGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TRDYRQEEETVLELSWGNSVPQS*GGGTGD Trigger: ATCCCCCGTGCCCCCACCCAAGCTTTGTGGCACACT...GTTCCCCCAAGAGAGTTCCAGGACGGTTTCTTCTTCCTGCCTGTAGTCACGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS-3UTR CAA 90 bp | CTGGCTTGCTCTGGGCTCCCCCGGATCAAAGCCATCACATCCATTGCCAGAGCAAGGAGCACCTCCTTTTaGTGTGGGTCCAGCTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LACSGLPRIKAITSIARARSTSF*CGSSLE Trigger: CTCTAAGCTGGACCCACACAAAAAGGAGGTGCTCCT...TGCTCTGGCAATGGATGTGATGGCTTTGATCCGGGGGAGCCCAGAGCAAGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS GCA 90 bp | GTTGACAAAGTCCTGGTAGCAGATCTGCCCATCTGCATGGCTGTCTaGGAGAGCCAGGAGCACCTCCTTTTTGTGTGGGTCCAGCTTAGA | + |
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Preference number: 5 (lower is better) Translates to: VDKVLVADLPICMAV*ESQEHLLFVWVQLR Trigger: TCTAAGCTGGACCCACACAAAAAGGAGGTGCTCCTGGCTCTCGCAGACAGCCATGCAGATGGGCAGATCTGCTACCAGGACTTTGTCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS GCA 90 bp | GTTGCTCATCAGGTTGACAAAGTCCTGGTAGCAGATCTGCCCATCTaGATGGCTGTCTGCGAGAGCCAGGAGCACCTCCTTTTTGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VAHQVDKVLVADLPI*MAVCESQEHLLFVW Trigger: CCACACAAAAAGGAGGTGCTCCTGGCTCTCGCAGACAGCCATGCAGATGGGCAGATCTGCTACCAGGACTTTGTCAACCTGATGAGCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS-3UTR CAA 90 bp | ACTCTCTTGGGGGAACCTGGGATGAAGAAAGTCATTACCTCAGCACAGGGCCCTGCCTGGCGGAAGCTGTaGGAACGTTTGTTGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: TLLGEPGMKKVITSAQGPAWRKL*ERLLLI Trigger: GATGAGCAACAAACGTTCCAACAGCTTCCGCCAGGC...AGGGCCCTGTGCTGAGGTAATGACTTTCTTCATCCCAGGTTCCCCCAAGAGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS CCA 90 bp | ATACTCATACAGATCAAGGCCACAGCCATCCGCAGCAGCTTGAACTaGCACTTCATGCCTGACCAGTTCATGACAATGTTGGCTAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILIQIKATAIRSSLN*HFMPDQFMTMLARW Trigger: CCACCTAGCCAACATTGTCATGAACTGGTCAGGCATGAAGTGCCAGTTCAAGCTGCTGCGGATGGCTGTGGCCTTGATCTGTATGAGTAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS-3UTR CAA 90 bp | TCAGACCTTACCCATGACTCCATATCATCAGACCAGCCTAGAAAGATGACAGCACTGTTGGAACGTTTGTaGCTCATCAGGTTGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SDLTHDSISSDQPRKMTALLERL*LIRLTK Trigger: CTTTGTCAACCTGATGAGCAACAAACGTTCCAACAG...TGCTGTCATCTTTCTAGGCTGGTCTGATGATATGGAGTCATGGGTAAGGTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS GCA 72 bp | GCCCAGGGTGATGCCCACGGCCACGCCACCCAAGTGTaGCACAAAGCTTGGGTGGGGGCACGGGGGATAAGC | + |
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Preference number: 6 (lower is better) Translates to: AQGDAHGHATQV*HKAWVGARGIS Trigger: GCTTATCCCCCGTGCCCCCACCCAAGCTTTGTGGCACACTTGGGTGGCGTGGCCGTGGGCATCACCCTGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS GCA 72 bp | GAGCGCATACACCCCTCCGGAAGAGCCCACAACAGGTaGAGTCATGTCAGCCACAGACACCGCCAAGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ERIHPSGRAHNR*SHVSHRHRQGA Trigger: GGCTCCTTGGCGGTGTCTGTGGCTGACATGACTGCACCTGTTGTGGGCTCTTCCGGAGGGGTGTATGCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS CAA 90 bp | TGCCCATCTGCATGGCTGTCTGCGAGAGCCAGGAGCACCTCCTTTTaGTGTGGGTCCAGCTTAGAGCTGTGGCTCTCCAGGAGGCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: CPSAWLSARARSTSF*CGSSLELWLSRRLR Trigger: CCGGAGCCTCCTGGAGAGCCACAGCTCTAAGCTGGACCCACACAAAAAGGAGGTGCTCCTGGCTCTCGCAGACAGCCATGCAGATGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS GCA 72 bp | GCGGAGGGCAGCAGGTGTAGCTGTCATAGTACCACTTaGGGTCAATCTCCCGGGGCAGAGTCTCGTAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AEGSRCSCHSTT*GQSPGAESRRP Trigger: TGGCCTACGAGACTCTGCCCCGGGAGATTGACCGCAAGTGGTACTATGACAGCTACACCTGCTGCCCTCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS CCA 72 bp | GTCAAACTTTTCAAACAGGACTTTCCAGTGGTCTTCTaGCGCGGCGGGCAGTCGCTCCTCGGCCTCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VKLFKQDFPVVF*RGGQSLLGLGL Trigger: GAGCCCGAGGCCGAGGAGCGACTGCCCGCCGCGCCAGAAGACCACTGGAAAGTCCTGTTTGAAAAGTTTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS CCA 72 bp | CACAAAGCTTGGGTGGGGGCACGGGGGATAAGCCGATaGGTGGAAACGGAGCCATACAGCCCTTCCGAACTC | + |
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Preference number: 6 (lower is better) Translates to: HKAWVGARGISR*VETEPYSPSEL Trigger: GAGTTCGGAAGGGCTGTATGGCTCCGTTTCCACCCATCGGCTTATCCCCCGTGCCCCCACCCAAGCTTTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS CCA 72 bp | CTTCCAGGGTCAAACTTTTCAAACAGGACTTTCCAGTaGTCTTCTGGCGCGGCGGGCAGTCGCTCCTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: LPGSNFSNRTFQ*SSGAAGSRSSA Trigger: GGCCGAGGAGCGACTGCCCGCCGCGCCAGAAGACCACTGGAAAGTCCTGTTTGAAAAGTTTGACCCTGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS CCA 72 bp | GCTGTCTGCGAGAGCCAGGAGCACCTCCTTTTTGTGTaGGTCCAGCTTAGAGCTGTGGCTCTCCAGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AVCESQEHLLFV*VQLRAVALQEA Trigger: AGCCTCCTGGAGAGCCACAGCTCTAAGCTGGACCCACACAAAAAGGAGGTGCTCCTGGCTCTCGCAGACAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS CCA 72 bp | GGGCCTTGCTGCTCAGCCTGCGGTTTCCCTGAAGGATaGCCTGGCGGAAGCTGTTGGAACGTTTGTTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GPCCSACGFPEG*PGGSCWNVCCS Trigger: TGAGCAACAAACGTTCCAACAGCTTCCGCCAGGCCATCCTTCAGGGAAACCGCAGGCTGAGCAGCAAGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS GCA 72 bp | CAGGTTGACAAAGTCCTGGTAGCAGATCTGCCCATCTaGATGGCTGTCTGCGAGAGCCAGGAGCACCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QVDKVLVADLPI*MAVCESQEHLL Trigger: AAGGAGGTGCTCCTGGCTCTCGCAGACAGCCATGCAGATGGGCAGATCTGCTACCAGGACTTTGTCAACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS CCA 72 bp | AGCACCTCCTTTTTGTGTGGGTCCAGCTTAGAGCTGTaGCTCTCCAGGAGGCTCCGGAACTTTCCTGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: STSFLCGSSLEL*LSRRLRNFPVL Trigger: CAGCACAGGAAAGTTCCGGAGCCTCCTGGAGAGCCACAGCTCTAAGCTGGACCCACACAAAAAGGAGGTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS CCA 72 bp | TTCATGCCTGACCAGTTCATGACAATGTTGGCTAGGTaGGCAGAGACGAGCGCATACACCCCTCCGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FMPDQFMTMLAR*AETSAYTPPEE Trigger: CTCTTCCGGAGGGGTGTATGCGCTCGTCTCTGCCCACCTAGCCAACATTGTCATGAACTGGTCAGGCATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS TCA 72 bp | TGTGGCTCTCCAGGAGGCTCCGGAACTTTCCTGTGCTaGTGTAGCCGGTGCTTCCAGGGTCAAACTTTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: CGSPGGSGTFLC*CSRCFQGQTFQ Trigger: TTGAAAAGTTTGACCCTGGAAGCACCGGCTACATCAGCACAGGAAAGTTCCGGAGCCTCCTGGAGAGCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS TCA 72 bp | TTCAGGTATCGAGGGTGCGTCACCTGCAGCACAAACTaGTCTAGTAGGACCCCGTTGTACAGGAAAAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FRYRGCVTCSTN*SSRTPLYRKRA Trigger: TGCCCTTTTCCTGTACAACGGGGTCCTACTAGATCAGTTTGTGCTGCAGGTGACGCACCCTCGATACCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS CCA 72 bp | CAGATCAAGGCCACAGCCATCCGCAGCAGCTTGAACTaGCACTTCATGCCTGACCAGTTCATGACAATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QIKATAIRSSLN*HFMPDQFMTML Trigger: CAACATTGTCATGAACTGGTCAGGCATGAAGTGCCAGTTCAAGCTGCTGCGGATGGCTGTGGCCTTGATCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS CAA 72 bp | CTCATACAGATCAAGGCCACAGCCATCCGCAGCAGCTaGAACTGGCACTTCATGCCTGACCAGTTCATGACA | + |
|
Preference number: 6 (lower is better) Translates to: LIQIKATAIRSS*NWHFMPDQFMT Trigger: TGTCATGAACTGGTCAGGCATGAAGTGCCAGTTCAAGCTGCTGCGGATGGCTGTGGCCTTGATCTGTATGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS CCA 72 bp | TCCAGAAGACAGCAAACAGCACGAAGATGGTGTACATaGTCACAAAGATCCACCACAGCGACTGGTCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRRQQTARRWCT*SQRSTTATGPA Trigger: TGCAGGACCAGTCGCTGTGGTGGATCTTTGTGACCATGTACACCATCTTCGTGCTGTTTGCTGTCTTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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| CDS CAA 90 bp | AACTCCATACTCATACAGATCAAGGCCACAGCCATCCGCAGCAGCTaGAACTGGCACTTCATGCCTGACCAGTTCATGACAATGTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: NSILIQIKATAIRSS*NWHFMPDQFMTMLA Trigger: AGCCAACATTGTCATGAACTGGTCAGGCATGAAGTGCCAGTTCAAGCTGCTGCGGATGGCTGTGGCCTTGATCTGTATGAGTATGGAGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017836.8 |
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