Pregenerated sensors for RHBDL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025735Ensembl transcript IDs: ENSMUST00000026831.14, ENSMUST00000183929.8, ENSMUST00000184865.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGTCAGTGGGGAGGGAAGGGGTCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCAGACTTGGCTTCAGCTaGGGGTGGGGGATCACAGGG | + |
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Preference number: 2 (lower is better) Translates to: GQWGGKGSPLGPRSRSSTRLGFS*GWGITG Trigger: CCCTGTGATCCCCCACCCCCAGCTGAAGCCAAGTCT...GGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGACCCCTTCCCTCCCCACTGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGAGGGAAGGGGTCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCGGGTGCAGCAAGGGCTaGAGTAAGACTTGGCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: VGREGVSSRATLKVLHPAGCSKG*SKTWLQ Trigger: CTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCACCC...GGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGACCCCTTCCCTCCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| 3UTR-3UTR CCA 90 bp | GGGTGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACACATGCAGGCCCACCTaGTGCCTGGCTCTAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: GCSKGCSKTWLQLGVGDHTCRPT*CLALAT Trigger: TGTGGCTAGAGCCAGGCACCAGGTGGGCCTGCATGT...GTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| 3UTR-3UTR GCA 90 bp | TGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGGCATATAGGGCAGACATaGAGGCCCACCTGGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: CSKGCSKTWLQLGVGDHRHIGQT*RPTWCL Trigger: CAGGCACCAGGTGGGCCTGCATGTCTGCCCTATATG...CCTGTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| 3UTR CCA 72 bp | CCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCCTaGCCCAGTAACACCCCTCCCCCTGGAAAGCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: PLGPRSRSSTQP*PSNTPPPGKPG Trigger: CCCAGGCTTTCCAGGGGGAGGGGTGTTACTGGGCCAGGGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| 3UTR GCA 72 bp | AAAGCAGCCGAGAGGTCCATTCATATAGGGCAGACATaGAGGCCCACCTGGTGCCTGGCTCTAGCCACATGG | + |
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Preference number: 3 (lower is better) Translates to: KAAERSIHIGQT*RPTWCLALATW Trigger: CCATGTGGCTAGAGCCAGGCACCAGGTGGGCCTGCATGTCTGCCCTATATGAATGGACCTCTCGGCTGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR TCA 90 bp | AGGGAAGGGGTCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCCTGGCCCCCCGCTCGTTGCTCTaGGCCAGAGCCACCAACATG | + |
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Preference number: 4 (lower is better) Translates to: REGVSSRATLKVLHPALAPRSLL*ARATNM Trigger: CATGTTGGTGGCTCTGGCTCAGAGCAACGAGCGGGG...GGCCAGGGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGACCCCTTCCCT 67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS-3UTR TCA 90 bp | GTGGGGAGGGAAGGGGTCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCGCTGCAGGAGGGCATTaGACCCTAGCTGCTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VGREGVSSRATLKVLHPAAAGGH*TLAAPA Trigger: GGCTGGAGCAGCTAGGGTTCAATGCCCTCCTGCAGC...GGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGACCCCTTCCCTCCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS-3UTR CCA 90 bp | GGGAAGGGGTCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCCTGGCCCTCCAGGGGCAGCTCATaGCTGTGTACCAGACCAGCG | + |
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Preference number: 4 (lower is better) Translates to: GKGSPLGPRSRSSTQPWPSRGSS*LCTRPA Trigger: CGCTGGTCTGGTACACAGCCATGAGCTGCCCCTGGA...GGGCCAGGGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGACCCCTTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS-3UTR CCA 90 bp | GGGAAGGGGTCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCCTGGCCCCATGAACACAGGGGGTaGGCAGGTGCGGTGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GKGSPLGPRSRSSTQPWPHEHRG*AGAVPV Trigger: TACAGGCACCGCACCTGCCCACCCCCTGTGTTCATG...GGGCCAGGGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGACCCCTTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS-3UTR CCA 90 bp | GTGGGGAGGGAAGGGGTCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCACCCACCAGCCGCACTaGTCCCTCAGGCGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VGREGVSSRATLKVLHPATHQPH*SLRRSS Trigger: TGAGGAACGCCTGAGGGACCAGTGCGGCTGGTGGGT...GGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGACCCCTTCCCTCCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS-3UTR GCA 90 bp | GTGGGGAGGGAAGGGGTCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCTGCACCAGCCAGGTGTaGCATGAAGCTGGGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: VGREGVSSRATLKVLHPACTSQV*HEAGLW Trigger: CCACAGCCCAGCTTCATGGCACACCTGGCTGGTGCA...GGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGACCCCTTCCCTCCCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS-3UTR GCA 90 bp | TCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCCTGGCCCAGTAACACCCAGGGGGTGGGCAGGTaGGGTGCCTGTAGAAGTACC | + |
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Preference number: 4 (lower is better) Translates to: SPLGPRSRSSTQPWPSNTQGVGR*GACRST Trigger: GGTACTTCTACAGGCACCGCACCTGCCCACCCCCTG...GGTGTTACTGGGCCAGGGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS-3UTR CCA 90 bp | CCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCCTGGCCCAGTAACACCCCTCCGAGCACGGTGTCCTaGGTGATACACCAGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PLGPRSRSSTQPWPSNTPPSTVS*VIHQRA Trigger: AGCCCTCTGGTGTATCACCCAGGACACCGTGCTCGG...AGGGGTGTTACTGGGCCAGGGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS-3UTR TCA 90 bp | TGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGGCAGCCAGGTGTGCCATaGAGCTGGGCTGTGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: CSKGCSKTWLQLGVGDHRQPGVP*SWAVGL Trigger: CAGGCCCACAGCCCAGCTTCATGGCACACCTGGCTG...CCTGTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR GCA 90 bp | TCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCCTGGCCCAGTAACACCTCCGTCTCGGGGCAGTaGCCGCTGTCCGTTAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLGPRSRSSTQPWPSNTSVSGQ*PLSVSN Trigger: ATTGCTAACGGACAGCGGGCACTGCCCCGAGACGGA...GGTGTTACTGGGCCAGGGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS-3UTR GCA 90 bp | GGGTGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACCAGGGGGTGGGCAGGTaGGGTGCCTGTAGAAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: GCSKGCSKTWLQLGVGDHQGVGR*GACRST Trigger: GGTACTTCTACAGGCACCGCACCTGCCCACCCCCTG...GTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR GCA 90 bp | AGGGAAGGGGTCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCCTGGCCCCACTTGTTGAGACGTaGCCCGTAGCACAGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: REGVSSRATLKVLHPALAPLVET*PVAQEH Trigger: GTGTTCCTGTGCTACGGGGCACGTCTCAACAAGTGG...GGCCAGGGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGACCCCTTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS-3UTR CCA 90 bp | AGGGAAGGGGTCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCCTGGCCAGGAACACGATGATCTaGGCAAGAGTGACCGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: REGVSSRATLKVLHPALARNTMI*ARVTEA Trigger: GGCCTCGGTCACTCTTGCCCAGATCATCGTGTTCCT...GGCCAGGGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGACCCCTTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS-3UTR CCA 90 bp | GGTCAGTGGGGAGGGAAGGGGTCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCCTCAGCAGCTTGTATaGACACCGCATCCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GQWGGKGSPLGPRSRSSTPQQLV*TPHPSP Trigger: TGGGCTGGGATGCGGTGTCCATACAAGCTGCTGAGG...GGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGACCCCTTCCCTCCCCACTGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS-3UTR TCA 90 bp | GGGTGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACTCCAGCTGCTGCTCCTaGATGAGCTGCAGCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCSKGCSKTWLQLGVGDHSSCCS*MSCSSE Trigger: CTCGCTGCTGCAGCTCATTCAGGAGCAGCAGCTGGA...GTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR TCA 90 bp | TGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGGCCCCGCTCGTTGCTCTaGGCCAGAGCCACCAACATG | + |
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Preference number: 4 (lower is better) Translates to: CSKGCSKTWLQLGVGDHRPRSLL*ARATNM Trigger: CATGTTGGTGGCTCTGGCTCAGAGCAACGAGCGGGG...CCTGTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR TCA 90 bp | GGGTGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACATTGGCCAGGTGTGCTaGGCACAGGGCATAGACCCC | + |
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Preference number: 4 (lower is better) Translates to: GCSKGCSKTWLQLGVGDHIGQVC*AQGIDP Trigger: GGGGTCTATGCCCTGTGCTCAGCACACCTGGCCAAT...GTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR CCA 90 bp | TCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCCTGGCCCAGTAACACCCCAACATGTCCAACTTaGTGGGGTCCAGGGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SPLGPRSRSSTQPWPSNTPTCPT*WGPGAA Trigger: AGCTGCCCCTGGACCCCACCAAGTTGGACATGTTGG...GGTGTTACTGGGCCAGGGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS-3UTR CCA 90 bp | GGGTGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACCCGAGCACGGTGTCCTaGGTGATACACCAGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GCSKGCSKTWLQLGVGDHPSTVS*VIHQRA Trigger: AGCCCTCTGGTGTATCACCCAGGACACCGTGCTCGG...GTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR CCA 90 bp | TGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGGACCCACCAGCCGCACTaGTCCCTCAGGCGTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: CSKGCSKTWLQLGVGDHRTHQPH*SLRRSS Trigger: TGAGGAACGCCTGAGGGACCAGTGCGGCTGGTGGGT...CCTGTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR TCA 90 bp | GGGTGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACCCAGGTAGAGCAGGCTaGTGCGAAGCACGCCATGTA | + |
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Preference number: 4 (lower is better) Translates to: GCSKGCSKTWLQLGVGDHPGRAG*CEARHV Trigger: TACATGGCGTGCTTCGCATCAGCCTGCTCTACCTGG...GTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR TCA 90 bp | TGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGGATTGGCCAGGTGTGCTaGGCACAGGGCATAGACCCC | + |
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Preference number: 4 (lower is better) Translates to: CSKGCSKTWLQLGVGDHRIGQVC*AQGIDP Trigger: GGGGTCTATGCCCTGTGCTCAGCACACCTGGCCAAT...CCTGTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR GCA 90 bp | TGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGGTGCACCAGCCAGGTGTaGCATGAAGCTGGGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: CSKGCSKTWLQLGVGDHRCTSQV*HEAGLW Trigger: CCACAGCCCAGCTTCATGGCACACCTGGCTGGTGCA...CCTGTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR CCA 90 bp | TGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGGTCCAGGGGCAGCTCATaGCTGTGTACCAGACCAGCG | + |
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Preference number: 4 (lower is better) Translates to: CSKGCSKTWLQLGVGDHRSRGSS*LCTRPA Trigger: CGCTGGTCTGGTACACAGCCATGAGCTGCCCCTGGA...CCTGTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR CCA 90 bp | GGGTGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACCCAACATGTCCAACTTaGTGGGGTCCAGGGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GCSKGCSKTWLQLGVGDHPTCPT*WGPGAA Trigger: AGCTGCCCCTGGACCCCACCAAGTTGGACATGTTGG...GTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR TCA 90 bp | GGGTGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGGTGTCCGCACCGATaGAGCCTGTGTTCTCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: GCSKGCSKTWLQLGVGDHRCPHR*SLCSQD Trigger: ATCCTGAGAACACAGGCTTCATCGGTGCGGACACCT...GTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR TCA 90 bp | GTGGGGAAAAGCAGCCGAGAGGTCCATTCATATAGGGCAGACATGCAGGCCCACGCTGCAGGAGGGCATTaGACCCTAGCTGCTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VGKSSREVHSYRADMQAHAAGGH*TLAAPA Trigger: GGCTGGAGCAGCTAGGGTTCAATGCCCTCCTGCAGC...GTGGGCCTGCATGTCTGCCCTATATGAATGGACCTCTCGGCTGCTTTTCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR CCA 90 bp | TGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGGCCTCAGCAGCTTGTATaGACACCGCATCCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: CSKGCSKTWLQLGVGDHRPQQLV*TPHPSP Trigger: TGGGCTGGGATGCGGTGTCCATACAAGCTGCTGAGG...CCTGTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR TCA 90 bp | GTGGGGAAAAGCAGCCGAGAGGTCCATTCATATAGGGCAGACATGCAGGCCCACGGAGCACCCACTTGTTaGGACGTGCCCCGTAGCACA | + |
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Preference number: 4 (lower is better) Translates to: VGKSSREVHSYRADMQAHGAPTC*DVPRST Trigger: TGTGCTACGGGGCACGTCTCAACAAGTGGGTGCTCC...GTGGGCCTGCATGTCTGCCCTATATGAATGGACCTCTCGGCTGCTTTTCCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR GCA 90 bp | GTGGGGAAAAGCAGCCGAGAGGTCCATTCATATAGGGCAGACATGCAGGCCCACTCCGTCTCGGGGCAGTaGCCGCTGTCCGTTAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: VGKSSREVHSYRADMQAHSVSGQ*PLSVSN Trigger: ATTGCTAACGGACAGCGGGCACTGCCCCGAGACGGA...GTGGGCCTGCATGTCTGCCCTATATGAATGGACCTCTCGGCTGCTTTTCCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR CCA 90 bp | TGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGGAGGAACACGATGATCTaGGCAAGAGTGACCGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: CSKGCSKTWLQLGVGDHRRNTMI*ARVTEA Trigger: GGCCTCGGTCACTCTTGCCCAGATCATCGTGTTCCT...CCTGTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR TCA 90 bp | GTGGGGAAAAGCAGCCGAGAGGTCCATTCATATAGGGCAGACATGCAGGCCCACCCAGGTAGAGCAGGCTaGTGCGAAGCACGCCATGTA | + |
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Preference number: 4 (lower is better) Translates to: VGKSSREVHSYRADMQAHPGRAG*CEARHV Trigger: TACATGGCGTGCTTCGCATCAGCCTGCTCTACCTGG...GTGGGCCTGCATGTCTGCCCTATATGAATGGACCTCTCGGCTGCTTTTCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR GCA 90 bp | TGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGGACACCGATCATCAGCTaGAGGAGGGCATTGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: CSKGCSKTWLQLGVGDHRTPIIS*RRALNP Trigger: AGGGTTCAATGCCCTCCTGCAGCTGATGATCGGTGT...CCTGTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR GCA 90 bp | GTGGGGAAAAGCAGCCGAGAGGTCCATTCATATAGGGCAGACATGCAGGCCCACACACCGATCATCAGCTaGAGGAGGGCATTGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: VGKSSREVHSYRADMQAHTPIIS*RRALNP Trigger: AGGGTTCAATGCCCTCCTGCAGCTGATGATCGGTGT...GTGGGCCTGCATGTCTGCCCTATATGAATGGACCTCTCGGCTGCTTTTCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR CAA 90 bp | GTGGGGAGGGAAGGGGTCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCAGCTGCAGGAGGGCATaGAACCCTAGCTGCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: VGREGVSSRATLKVLHPASCRRA*NPSCSS Trigger: GCTGGAGCAGCTAGGGTTCAATGCCCTCCTGCAGCT...GGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGACCCCTTCCCTCCCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS GCA 90 bp | TACCACGGGGGCACGCATATCTGTGATAGAGACAGTCAGGGAGCCTaGCAGCACGCCCGCCAGGTAGAGCAGGCTGATGCGAAGCACGCC | + |
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Preference number: 5 (lower is better) Translates to: YHGGTHICDRDSQGA*QHARQVEQADAKHA Trigger: GGCGTGCTTCGCATCAGCCTGCTCTACCTGGCGGGCGTGCTGGCAGGCTCCCTGACTGTCTCTATCACAGATATGCGTGCCCCCGTGGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS CCA 90 bp | CACGATGATCTGGGCAAGAGTGACCGAGGCCATGAACACAGGGGGTaGGCAGGTGCGGTGCCTGTAGAAGTACCAGCGGCGGTCCACCTC | + |
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Preference number: 5 (lower is better) Translates to: HDDLGKSDRGHEHRG*AGAVPVEVPAAVHL Trigger: GAGGTGGACCGCCGCTGGTACTTCTACAGGCACCGCACCTGCCCACCCCCTGTGTTCATGGCCTCGGTCACTCTTGCCCAGATCATCGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 ENSMUST00000184865.2 |
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| CDS-3UTR CAA 90 bp | GGGAAGGGGTCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCCTGGCCCCAGTTCATGACAACATaGGCCAGGTGTGCTGAGCAC | + |
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Preference number: 5 (lower is better) Translates to: GKGSPLGPRSRSSTQPWPQFMTT*ARCAEH Trigger: GTGCTCAGCACACCTGGCCAATGTTGTCATGAACTG...GGGCCAGGGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGACCCCTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS-3UTR CAA 90 bp | GGGTGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACACCAACATGTCCAACTaGGTGGGGTCCAGGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GCSKGCSKTWLQLGVGDHTNMSN*VGSRGS Trigger: GCTGCCCCTGGACCCCACCAAGTTGGACATGTTGGT...GTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR CAA 90 bp | GGGTGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGCTGCAGGAGGGCATaGAACCCTAGCTGCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GCSKGCSKTWLQLGVGDHSCRRA*NPSCSS Trigger: GCTGGAGCAGCTAGGGTTCAATGCCCTCCTGCAGCT...GTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR CAA 90 bp | TGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGGACCAACATGTCCAACTaGGTGGGGTCCAGGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: CSKGCSKTWLQLGVGDHRTNMSN*VGSRGS Trigger: GCTGCCCCTGGACCCCACCAAGTTGGACATGTTGGT...CCTGTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR CAA 90 bp | AGGGAAGGGGTCTCCTCTAGGGCCACGCTCAAGGTCCTCCACCCAGCCCTGGCCTTAGCAATGGCTCTCTaGAAGCTGCTGGAACGCTTG | + |
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Preference number: 5 (lower is better) Translates to: REGVSSRATLKVLHPALALAMAL*KLLERL Trigger: CAAGCGTTCCAGCAGCTTCAAGAGAGCCATTGCTAA...GGCCAGGGCTGGGTGGAGGACCTTGAGCGTGGCCCTAGAGGAGACCCCTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS-3UTR CAA 90 bp | TGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGGAAGCTGCTGGAACGCTaGCTGCTGATCAGGTCCACC | + |
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Preference number: 5 (lower is better) Translates to: CSKGCSKTWLQLGVGDHRKLLER*LLIRST Trigger: GGTGGACCTGATCAGCAGCAAGCGTTCCAGCAGCTT...CCTGTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026831.14 |
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| CDS GCA 90 bp | CTGCTCCAGCCCGACATGCATGAACATGTAGGTGAGGAAGCGCCATaGCCGAGCACGGTGTCCTGGGTGATACACCAGAGGGCTCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: LLQPDMHEHVGEEAP*PSTVSWVIHQRALH Trigger: ATGAAGAGCCCTCTGGTGTATCACCCAGGACACCGTGCTCGGGCATGGCGCTTCCTCACCTACATGTTCATGCATGTCGGGCTGGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR CAA 90 bp | TGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGGAAGCTGCTGGAACGCTaGCTGCTGATCATGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: CSKGCSKTWLQLGVGDHRKLLER*LLIMAL Trigger: CAGTGCCATGATCAGCAGCAAGCGTTCCAGCAGCTT...CCTGTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183929.8 |
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| CDS-3UTR CAA 90 bp | TGCAGCAAGGGCTGCAGTAAGACTTGGCTTCAGCTGGGGGTGGGGGATCACAGGTTAGCAATGGCTCTCTaGAAGCTGCTGGAACGCTTG | + |
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Preference number: 5 (lower is better) Translates to: CSKGCSKTWLQLGVGDHRLAMAL*KLLERL Trigger: CAAGCGTTCCAGCAGCTTCAAGAGAGCCATTGCTAA...CCTGTGATCCCCCACCCCCAGCTGAAGCCAAGTCTTACTGCAGCCCTTGCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR CAA 90 bp | GTGGGGAAAAGCAGCCGAGAGGTCCATTCATATAGGGCAGACATGCAGGCCCACACCATCCTCAGCAGCTaGTATGGACACCGCATCCCA | + |
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Preference number: 5 (lower is better) Translates to: VGKSSREVHSYRADMQAHTILSS*YGHRIP Trigger: TGGGATGCGGTGTCCATACAAGCTGCTGAGGATGGT...GTGGGCCTGCATGTCTGCCCTATATGAATGGACCTCTCGGCTGCTTTTCCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS-3UTR CAA 90 bp | GTGGGGAAAAGCAGCCGAGAGGTCCATTCATATAGGGCAGACATGCAGGCCCACCAGTTCATGACAACATaGGCCAGGTGTGCTGAGCAC | + |
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Preference number: 5 (lower is better) Translates to: VGKSSREVHSYRADMQAHQFMTT*ARCAEH Trigger: GTGCTCAGCACACCTGGCCAATGTTGTCATGAACTG...GTGGGCCTGCATGTCTGCCCTATATGAATGGACCTCTCGGCTGCTTTTCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS GCA 90 bp | CATATATTCAGGGTGGTAGGTCTGGAGCACCCACTTGTTGAGACGTaGCCCGTAGCACAGGAACACGATGATCTGGGCAAGAGTGACCGA | + |
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Preference number: 5 (lower is better) Translates to: HIFRVVGLEHPLVET*PVAQEHDDLGKSDR Trigger: TCGGTCACTCTTGCCCAGATCATCGTGTTCCTGTGCTACGGGGCACGTCTCAACAAGTGGGTGCTCCAGACCTACCACCCTGAATATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 ENSMUST00000184865.2 |
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| CDS CCA 90 bp | CATGAACATGTAGGTGAGGAAGCGCCATGCCCGAGCACGGTGTCCTaGGTGATACACCAGAGGGCTCTTCATATATTCAGGGTGGTAGGT | + |
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Preference number: 5 (lower is better) Translates to: HEHVGEEAPCPSTVS*VIHQRALHIFRVVG Trigger: ACCTACCACCCTGAATATATGAAGAGCCCTCTGGTGTATCACCCAGGACACCGTGCTCGGGCATGGCGCTTCCTCACCTACATGTTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS GCA 72 bp | CCCTCCAGAGCCCCCTACCACGGGGGCACGCATATCTaGCAGCACGCCCGCCAGGTAGAGCAGGCTGATGCG | + |
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Preference number: 6 (lower is better) Translates to: PSRAPYHGGTHI*QHARQVEQADA Trigger: CGCATCAGCCTGCTCTACCTGGCGGGCGTGCTGGCAGATATGCGTGCCCCCGTGGTAGGGGGCTCTGGAGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183929.8 |
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| CDS CCA 72 bp | CTGGGCAAGAGTGACCGAGGCCATGAACACAGGGGGTaGGCAGGTGCGGTGCCTGTAGAAGTACCAGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: LGKSDRGHEHRG*AGAVPVEVPAA Trigger: CGCCGCTGGTACTTCTACAGGCACCGCACCTGCCCACCCCCTGTGTTCATGGCCTCGGTCACTCTTGCCCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 ENSMUST00000184865.2 |
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| CDS GCA 72 bp | CCACCAGCTCCTGGTAGCAGACCTGGCCCCGCTCGTTaGTCTGAGCCAGAGCCACCAACATGTCCAACTTGG | + |
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Preference number: 6 (lower is better) Translates to: PPAPGSRPGPAR*SEPEPPTCPTW Trigger: CCAAGTTGGACATGTTGGTGGCTCTGGCTCAGAGCAACGAGCGGGGCCAGGTCTGCTACCAGGAGCTGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS CAA 90 bp | AGTCCGTCTCGGGGCAGTGCCCGCTGTCCGTTAGCAATGGCTCTCTaGAAGCTGCTGGAACGCTTGCTGCTGATCATGGCACTGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: SPSRGSARCPLAMAL*KLLERLLLIMALTR Trigger: CCTGGTCAGTGCCATGATCAGCAGCAAGCGTTCCAGCAGCTTCAAGAGAGCCATTGCTAACGGACAGCGGGCACTGCCCCGAGACGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183929.8 |
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| CDS TCA 72 bp | GGCTGTGTACCAGACCAGCGAAGGTGTCCGCACCGATaGAGCCTGTGTTCTCAGGATCCAGCTGCTGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GCVPDQRRCPHR*SLCSQDPAAAP Trigger: AGGAGCAGCAGCTGGATCCTGAGAACACAGGCTTCATCGGTGCGGACACCTTCGCTGGTCTGGTACACAGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS GCA 72 bp | CCCGACATGCATGAACATGTAGGTGAGGAAGCGCCATaGCCGAGCACGGTGTCCTGGGTGATACACCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: PDMHEHVGEEAP*PSTVSWVIHQR Trigger: CCTCTGGTGTATCACCCAGGACACCGTGCTCGGGCATGGCGCTTCCTCACCTACATGTTCATGCATGTCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS GCA 72 bp | CCGAAGGATGGTAAGGCCCATGCTTACACCTACCACTaGACCAGCCAGGTGTGCCATGAAGCTGGGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PKDGKAHAYTYH*TSQVCHEAGLW Trigger: CCACAGCCCAGCTTCATGGCACACCTGGCTGGTGCAGTGGTAGGTGTAAGCATGGGCCTTACCATCCTTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS CCA 72 bp | CGTTGCTCTGAGCCAGAGCCACCAACATGTCCAACTTaGTGGGGTCCAGGGGCAGCTCATGGCTGTGTACCA | + |
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Preference number: 6 (lower is better) Translates to: RCSEPEPPTCPT*WGPGAAHGCVP Trigger: TGGTACACAGCCATGAGCTGCCCCTGGACCCCACCAAGTTGGACATGTTGGTGGCTCTGGCTCAGAGCAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS CAA 72 bp | TCCAGGGGCACACCGATCATCAGCTGCAGGAGGGCATaGAACCCTAGCTGCTCCAGCCCGACATGCATGAAC | + |
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Preference number: 6 (lower is better) Translates to: SRGTPIISCRRA*NPSCSSPTCMN Trigger: GTTCATGCATGTCGGGCTGGAGCAGCTAGGGTTCAATGCCCTCCTGCAGCTGATGATCGGTGTGCCCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS TCA 72 bp | GTGAGGAAGCGCCATGCCCGAGCACGGTGTCCTGGGTaGTACACCAGAGGGCTCTTCATATATTCAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: VRKRHARARCPG*YTRGLFIYSGW Trigger: CCACCCTGAATATATGAAGAGCCCTCTGGTGTATCACCCAGGACACCGTGCTCGGGCATGGCGCTTCCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS GCA 72 bp | AGGGTGGTAGGTCTGGAGCACCCACTTGTTGAGACGTaGCCCGTAGCACAGGAACACGATGATCTGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: RVVGLEHPLVET*PVAQEHDDLGK Trigger: CTTGCCCAGATCATCGTGTTCCTGTGCTACGGGGCACGTCTCAACAAGTGGGTGCTCCAGACCTACCACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 ENSMUST00000184865.2 |
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| CDS CCA 72 bp | GTAGGTGAGGAAGCGCCATGCCCGAGCACGGTGTCCTaGGTGATACACCAGAGGGCTCTTCATATATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VGEEAPCPSTVS*VIHQRALHIFR Trigger: CCTGAATATATGAAGAGCCCTCTGGTGTATCACCCAGGACACCGTGCTCGGGCATGGCGCTTCCTCACCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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| CDS CAA 72 bp | CCGTTAGCAATGGCTCTCTTGAAGCTGCTGGAACGCTaGCTGCTGATCATGGCACTGACCAGGTCCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: PLAMALLKLLER*LLIMALTRSTS Trigger: GCTGGTGGACCTGGTCAGTGCCATGATCAGCAGCAAGCGTTCCAGCAGCTTCAAGAGAGCCATTGCTAACGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183929.8 |
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| CDS CAA 90 bp | ACTTCGGAACTCATGCACACCAGAGCCAGCACCATCCTCAGCAGCTaGTATGGACACCGCATCCCAGCCCAGTTCATGACAACATTGGCC | + |
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Preference number: 6 (lower is better) Translates to: TSELMHTRASTILSS*YGHRIPAQFMTTLA Trigger: GGCCAATGTTGTCATGAACTGGGCTGGGATGCGGTGTCCATACAAGCTGCTGAGGATGGTGCTGGCTCTGGTGTGCATGAGTTCCGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026831.14 ENSMUST00000183929.8 |
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