Pregenerated sensors for RHBDF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020282Ensembl transcript IDs: ENSMUST00000020524.15, ENSMUST00000132578.8, ENSMUST00000144902.2, ENSMUST00000146179.8, ENSMUST00000150381.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTaGGAGGCCGGGCTGGCCTGGGGAGTCCACGGCTGGTTCAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: RHKRSVSRKHPSVQP*EAGLAWGVHGWFSG Trigger: TCCACTGAACCAGCCGTGGACTCCCCAGGCCAGCCCGGCCTCCCAGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
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| 3UTR CAA 90 bp | CTCCTGGGTCCCGCCGCACTGACCACCTCCTGGCGAAGCCGCACCTaGGGCTGCGGGGCTAGAGGGCCGCCTTCCTTCTGCTTTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LLGPAALTTSWRSRT*GCGARGPPSFCFLQ Trigger: CTGGAGAAAGCAGAAGGAAGGCGGCCCTCTAGCCCCGCAGCCCAAGGTGCGGCTTCGCCAGGAGGTGGTCAGTGCGGCGGGACCCAGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
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| 3UTR-3UTR TCA 90 bp | CCACTCGTGGGGATCCTCAGAGGAAGGCTCGTCACATACCCTGGGGTCCTGGTGTGGCACCCAAGTGAATaGGGGCCTCCGAGCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: PLVGILRGRLVTYPGVLVWHPSE*GPPSWG Trigger: GCCCCAGCTCGGAGGCCCTCATTCACTTGGGTGCCA...CACCAGGACCCCAGGGTATGTGACGAGCCTTCCTCTGAGGATCCCCACGAGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGCCTGGGAGGCCGGGCTaGCCTGGGGAGTCCACGGCT | + |
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Preference number: 2 (lower is better) Translates to: QQCKRTTGASKAQEVSVQPGRPG*PGESTA Trigger: AGCCGTGGACTCCCCAGGCCAGCCCGGCCTCCCAGG...CTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGCGGGGCTAGAGGGCCGCCTTCCTTCTGCTTTCTCCAGCCTCGTTCCAGGCTTGAGCGCTGCCTCTaGTGGGGACTCAAACACCTC | + |
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Preference number: 2 (lower is better) Translates to: GCGARGPPSFCFLQPRSRLERCL*WGLKHL Trigger: GAGGTGTTTGAGTCCCCATCAGAGGCAGCGCTCAAG...CCTGGAACGAGGCTGGAGAAAGCAGAAGGAAGGCGGCCCTCTAGCCCCGCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
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| 3UTR-3UTR GCA 90 bp | AGCACTCCTCCTTGGAAGTCTGCACACACCCAGACCGATCATTGCGTACACAGCAGCCGCACCTTGGGCTaGGGGGCTAGAGGGCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: STPPWKSAHTQTDHCVHSSRTLG*GARGPP Trigger: AGGCGGCCCTCTAGCCCCGCAGCCCAAGGTGCGGCT...GCTGTGTACGCAATGATCGGTCTGGGTGTGTGCAGACTTCCAAGGAGGAGTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
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| 3UTR-3UTR GCA 90 bp | AGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGAGTCCACCGTCTCATaGTGCGAGAAGCCCACGGGC | + |
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Preference number: 2 (lower is better) Translates to: SEQGTRGQCPGSTHLFSPESTVS*CEKPTG Trigger: GCCCGTGGGCTTCTCGCAGCATGAGACGGTGGACTC...AGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
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| 3UTR-3UTR CCA 90 bp | CATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAACCATCTGTTCAGCCCTaGGAGGCCGGGCTGGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HVLNAQQCKRTTGASKAQPSVQP*EAGLAW Trigger: CCAGGCCAGCCCGGCCTCCCAGGGCTGAACAGATGG...TTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| 3UTR-3UTR CCA 90 bp | AGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGCTCGTCACATACCCTaGGGTCCTGGTGGCAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: SEQGTRGQCPGSTHLFSPARHIP*GPGGRQ Trigger: CTGTCTGCCACCAGGACCCCAGGGTATGTGACGAGC...AGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
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| 3UTR CCA 72 bp | AGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTaGGAGGCCGGGCTGGCCTGGGGAGTCCACGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: RSVSRKHPSVQP*EAGLAWGVHGW Trigger: CCAGCCGTGGACTCCCCAGGCCAGCCCGGCCTCCCAGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| 3UTR TCA 72 bp | CGAGCGAAGAGTTTGCGCACTGGCACAGCGATACGCTaGCCCCTCCTGGGTCCCGCCGCACTGACCACCTCC | + |
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Preference number: 3 (lower is better) Translates to: RAKSLRTGTAIR*PLLGPAALTTS Trigger: GGAGGTGGTCAGTGCGGCGGGACCCAGGAGGGGTCAGCGTATCGCTGTGCCAGTGCGCAAACTCTTCGCTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
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| 3UTR-3UTR CAA 90 bp | CGTGGGGATCCTCAGAGGAAGGCTCGTCACATACCCTGGGGTCCTGGTGGCAGAGACGAGCACTCCTCCTaGGAAGTCTGCACACACCCA | + |
|
Preference number: 3 (lower is better) Translates to: RGDPQRKARHIPWGPGGRDEHSS*EVCTHP Trigger: TGGGTGTGTGCAGACTTCCAAGGAGGAGTGCTCGTC...TCTGCCACCAGGACCCCAGGGTATGTGACGAGCCTTCCTCTGAGGATCCCCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
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| 3UTR-3UTR CAA 90 bp | AGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTTTCCCCGCGCTGCTTTaGGTGCAGATCGGCCACTTG | + |
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Preference number: 3 (lower is better) Translates to: SEQGTRGQCPGSTHLFSPFPALL*VQIGHL Trigger: CAAGTGGCCGATCTGCACCAAAAGCAGCGCGGGGAA...AGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
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| 3UTR-3UTR CAA 90 bp | AGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTATGATCTGGCAGCGCTaGCGGTACAGGTCGAACTTG | + |
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Preference number: 3 (lower is better) Translates to: SEQGTRGQCPGSTHLFSPMIWQR*RYRSNL Trigger: CAAGTTCGACCTGTACCGCAAGCGCTGCCAGATCAT...AGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
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| 3UTR GCA 72 bp | CCTCCTTGGAAGTCTGCACACACCCAGACCGATCATTaGGTACACAGCAAGCCGAGTGCTTTTCACGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: PPWKSAHTQTDH*VHSKPSAFHAP Trigger: GGGAGCGTGAAAAGCACTCGGCTTGCTGTGTACGCAATGATCGGTCTGGGTGTGTGCAGACTTCCAAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
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| CDS-3UTR CCA 90 bp | GAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCAGCCGGCGAGGCTCATaGTGGGGTGATGGGACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ERARHKRSVSRKHPSVQPSRRGS*WGDGTR Trigger: CCGGGTCCCATCACCCCACCATGAGCCTCGCCGGCT...GGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR TCA 90 bp | GAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGGCACCCAAGTGAATaGGGGCCTCCGAGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERARHKRSVSRKHPSVQPWHPSE*GPPSWG Trigger: GCCCCAGCTCGGAGGCCCTCATTCACTTGGGTGCCA...GGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR GCA 90 bp | CGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGGTGTCGCCGCAGGGGCTaGAGGAAGCTGGGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RARHKRSVSRKHPSVQPWCRRRG*RKLGSS Trigger: AGAGGAGCCCAGCTTCCTGCAGCCCCTGCGGCGACA...CCAGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR GCA 90 bp | CGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGGGCGGGAGCTTCTGCATaGCCAGCTGGCATGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: RARHKRSVSRKHPSVQPWAGASA*PAGMAP Trigger: TGGGGCCATGCCAGCTGGGCATGCAGAAGCTCCCGC...CCAGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
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| CDS-3UTR CCA 90 bp | AGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTAGCCGGCGAGGCTCATaGTGGGGTGATGGGACCCGG | + |
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Preference number: 4 (lower is better) Translates to: SEQGTRGQCPGSTHLFSPSRRGS*WGDGTR Trigger: CCGGGTCCCATCACCCCACCATGAGCCTCGCCGGCT...AGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR TCA 90 bp | AGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGGGTACGTGCGGTTGGTaGGCCGTCCCACCATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SSVSVQPERARHKRSVSRGTCGW*AVPPSP Trigger: TGGGGATGGTGGGACGGCTCACCAACCGCACGTACC...CCTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR GCA 90 bp | AGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGTGTCGCCGCAGGGGCTaGAGGAAGCTGGGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SSVSVQPERARHKRSVSRCRRRG*RKLGSS Trigger: AGAGGAGCCCAGCTTCCTGCAGCCCCTGCGGCGACA...CCTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR GCA 90 bp | CCACTCGTGGGGATCCTCAGAGGAAGGCTCGTCACATACCCTGGGGTCCTGGTGGGCTGCAGTGACGGATaGTCTTGCGCTGCCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: PLVGILRGRLVTYPGVLVGCSDG*SCAATS Trigger: AGAAGTGGCAGCGCAAGAGCATCCGTCACTGCAGCC...CACCAGGACCCCAGGGTATGTGACGAGCCTTCCTCTGAGGATCCCCACGAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
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| CDS-3UTR GCA 90 bp | CGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGGCAGTGTCATCAGCCATaGGAAAGGCCCGGCCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: RARHKRSVSRKHPSVQPWQCHQP*ERPGLG Trigger: CCCGAGGCCGGGCCTTTCGCATGGCTGATGACACTG...CCAGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR GCA 90 bp | GAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTTCTCTCAAGCTCACTaGGGTCCAGGGCCCCACCCG | + |
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Preference number: 4 (lower is better) Translates to: ERARHKRSVSRKHPSVQPFSQAH*GPGPHP Trigger: CGGGTGGGGCCCTGGACCGCAGTGAGCTTGAGAGAA...GGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR CCA 90 bp | AGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTCATGCCCAGCTGGCATaGCCCCACGTAGAGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SEQGTRGQCPGSTHLFSPHAQLA*PHVEGR Trigger: CCTCCCCTCTACGTGGGGCCATGCCAGCTGGGCATG...AGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR TCA 90 bp | CAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGGTCCAGCTCCCGGATaGCCTGCGGCTTTAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: QQCKRTTGASKAQEVSVQGPAPG*PAALAS Trigger: GGAAGCTAAAGCCGCAGGTCATCCGGGAGCTGGACC...CTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR TCA 90 bp | GAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGCACCTGTGGGTCCTaGCGCATGCAGGGTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: ERARHKRSVSRKHPSVQPCTCGS*RMQGEN Trigger: GTTCTCACCCTGCATGCGTCAGGACCCACAGGTGCA...GGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR TCA 90 bp | GAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTCCATGCAGTGCACCTaGGAGCAGAGTGTGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ERARHKRSVSRKHPSVQPSMQCT*EQSVAS Trigger: GGAGGCCACACTCTGCTCTCAGGTGCACTGCATGGA...GGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR CCA 90 bp | ATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCGGGGCTGCAGGAAGCTaGGCTCCTCTGCTGCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: MGTHVLNAQQCKRTTGASGAAGS*APLLPG Trigger: CCCCGGCAGCAGAGGAGCCCAGCTTCCTGCAGCCCC...GCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR TCA 90 bp | GAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCGGGCCAGAGGGTCTATaGTCTTCTGCATGCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: ERARHKRSVSRKHPSVQPGPEGL*SSACPA Trigger: AGCTGGGCATGCAGAAGATCATAGACCCTCTGGCCC...GGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR TCA 90 bp | CGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGGCTTGAGCGCTGCCTCTaGTGGGGACTCAAACACCTC | + |
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Preference number: 4 (lower is better) Translates to: RARHKRSVSRKHPSVQPWLERCL*WGLKHL Trigger: GAGGTGTTTGAGTCCCCATCAGAGGCAGCGCTCAAG...CCAGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR TCA 90 bp | CGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGGAAAGGAAGAGGCCGCTaGCAAAGCCCGAGATGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RARHKRSVSRKHPSVQPWKGRGR*QSPRCG Trigger: CCCACATCTCGGGCTTTGTCAGCGGCCTCTTCCTTT...CCAGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR CCA 90 bp | AGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAGGGACACATTGTCCTaGCTGGGCAGGTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSVSVQPERARHKRSVSRRDTLS*LGRSSS Trigger: GGAGCTGGACCTGCCCAGCCAGGACAATGTGTCCCT...CCTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR CCA 90 bp | AGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGTCTCACACCTGCCCTTaGTGCCGATGCAGCAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SSVSVQPERARHKRSVSRSHTCP*CRCSKA Trigger: GGCCTTGCTGCATCGGCACCAAGGGCAGGTGTGAGA...CCTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR TCA 90 bp | GAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGCGGATGGTCTGTGTaGTGGATGTCTGACGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ERARHKRSVSRKHPSVQPCGWSV*WMSDAA Trigger: TGCAGCGTCAGACATCCATCACACAGACCATCCGCA...GGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR TCA 90 bp | GTCCCACCATCCCCAGACCATAAGGCCGCTTTTCCCGAGCGAAGAGTTTGCGCATGCGGATGGTCTGTGTaGTGGATGTCTGACGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VPPSPDHKAAFPERRVCACGWSV*WMSDAA Trigger: TGCAGCGTCAGACATCCATCACACAGACCATCCGCA...TGCGCAAACTCTTCGCTCGGGAAAAGCGGCCTTATGGTCTGGGGATGGTGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
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| CDS-3UTR GCA 90 bp | CAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGAGTGACGGATGCTCTTaGGCTGCCACTTCTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: QQCKRTTGASKAQEVSVQSDGCS*AATSGC Trigger: GCACCCAGAAGTGGCAGCGCAAGAGCATCCGTCACT...CTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR GCA 90 bp | AGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTAGTGACGGATGCTCTTaGGCTGCCACTTCTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SEQGTRGQCPGSTHLFSPSDGCS*AATSGC Trigger: GCACCCAGAAGTGGCAGCGCAAGAGCATCCGTCACT...AGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR GCA 90 bp | AGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGGCTGCAGTGACGGATaGTCTTGCGCTGCCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: SEQGTRGQCPGSTHLFSPGCSDG*SCAATS Trigger: AGAAGTGGCAGCGCAAGAGCATCCGTCACTGCAGCC...AGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR GCA 90 bp | CGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGGGGGTCTATGATCTTCTaGATGCCCAGCTGGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: RARHKRSVSRKHPSVQPWGSMIF*MPSWHG Trigger: GCCATGCCAGCTGGGCATGCAGAAGATCATAGACCC...CCAGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR GCA 90 bp | CAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGCCCGAGCGAAGAGTTTaGGCACTGGCACAGCGATAC | + |
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Preference number: 4 (lower is better) Translates to: QQCKRTTGASKAQEVSVQPERRV*ALAQRY Trigger: GTATCGCTGTGCCAGTGCGCAAACTCTTCGCTCGGG...CTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR CCA 90 bp | CGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGGACGAGCACTCCTCCTTaGAAGTCTGCACACACCCAG | + |
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Preference number: 4 (lower is better) Translates to: RARHKRSVSRKHPSVQPWTSTPP*KSAHTQ Trigger: CTGGGTGTGTGCAGACTTCCAAGGAGGAGTGCTCGT...CCAGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR CCA 90 bp | CAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGTTGCCTGCAAGGTCTaGGGCACTAGGATGAACGGG | + |
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Preference number: 4 (lower is better) Translates to: QQCKRTTGASKAQEVSVQVACKV*GTRMNG Trigger: CCCGTTCATCCTAGTGCCCCAGACCTTGCAGGCAAC...CTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR TCA 90 bp | ATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCTACCGCTGGCTGCAGTaGCGGATGCTCTTGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: MGTHVLNAQQCKRTTGASYRWLQ*RMLLRC Trigger: GCAGCGCAAGAGCATCCGTCACTGCAGCCAGCGGTA...GCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR TCA 90 bp | AGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGGAGTCGGTTGAAACCTaGGCGGGAGCTGGAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVSVQPERARHKRSVSRESVET*AGAGER Trigger: TCTTTCTCCAGCTCCCGCTCAGGTTTCAACCGACTC...CCTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR TCA 90 bp | CGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGGGTGAAGAAGGGCCTGTaGTCATCCATGTCCTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: RARHKRSVSRKHPSVQPWVKKGL*SSMSSI Trigger: GATCGAGGACATGGATGATCACAGGCCCTTCTTCAC...CCAGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGCTGCCACTTCTGGGTaGTGTCACTGTCCTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QQCKRTTGASKAQEVSVQAATSG*CHCPCS Trigger: TGAGCAAGGACAGTGACAGCACCCAGAAGTGGCAGC...CTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCAGCCGCACCTTGGGCTaGGGGGCTAGAGGGCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTSRTLG*GARGPP Trigger: AGGCGGCCCTCTAGCCCCGCAGCCCAAGGTGCGGCT...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR GCA 90 bp | ATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCCTGAGCGGGAGCTTCTaGATGCCCAGCTGGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: MGTHVLNAQQCKRTTGASLSGSF*MPSWHG Trigger: GCCATGCCAGCTGGGCATGCAGAAGCTCCCGCTCAG...GCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGTTGCGCTGCCACTTCTaGGTGCTGTCACTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSVSVQPERARHKRSVSRLRCHF*VLSLSL Trigger: CAAGGACAGTGACAGCACCCAGAAGTGGCAGCGCAA...CCTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR CCA 90 bp | CGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGGGTGGTGTCTCGGTGCTaGTTAGGGACACATTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RARHKRSVSRKHPSVQPWVVSRC*LGTHCP Trigger: AGGACAATGTGTCCCTAACCAGCACCGAGACACCAC...CCAGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR CCA 90 bp | GTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGGCGAAGCCGCACCTTaGGCTGCGGGGCTAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VIMGTHVLNAQQCKRTTGGEAAP*AAGLEG Trigger: GCCCTCTAGCCCCGCAGCCCAAGGTGCGGCTTCGCC...TCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR CCA 90 bp | AGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGGTATGGCAGGAAGATaGCACTGGCTAGATTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SEQGTRGQCPGSTHLFSPGMAGR*HWLDCP Trigger: CGGGCAATCTAGCCAGTGCCATCTTCCTGCCATACC...AGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR TCA 90 bp | ATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCTGTGTGATGGATGTCTaGCGCTGCAGCACCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: MGTHVLNAQQCKRTTGASCVMDV*RCSTSR Trigger: CCGGCTGGTGCTGCAGCGTCAGACATCCATCACACA...GCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR TCA 90 bp | CGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGGCGAACTTGCCAAAGCTaGTGTAAGGCAGGAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RARHKRSVSRKHPSVQPWRTCQS*CKAGRQ Trigger: TTGCCTTCCTGCCTTACATCAGCTTTGGCAAGTTCG...CCAGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR GCA 90 bp | AGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGGAGGTGGTGTCTCGGTaGTGGTTAGGGACACATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSVSVQPERARHKRSVSREVVSR*WLGTHC Trigger: ACAATGTGTCCCTAACCAGCACCGAGACACCACCTC...CCTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGTCCTCCTTGGAAGTCTaGACACACCCAGACCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: QQCKRTTGASKAQEVSVQSSLEV*THPDRS Trigger: TGATCGGTCTGGGTGTGTGCAGACTTCCAAGGAGGA...CTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR GCA 90 bp | CATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAATGCAGGATCCCAGCGTaGAGGAAGAGGGACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HVLNAQQCKRTTGASKAQCRIPA*RKRDSH Trigger: GTGGCTGTCCCTCTTCCTGCACGCTGGGATCCTGCA...TTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR CCA 90 bp | ATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCAGGGACACATTGTCCTaGCTGGGCAGGTCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MGTHVLNAQQCKRTTGASRDTLS*LGRSSS Trigger: GGAGCTGGACCTGCCCAGCCAGGACAATGTGTCCCT...GCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCGCTCGTCACATACCCTaGGGTCCTGGTGGCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: MGTHVLNAQQCKRTTGASARHIP*GPGGRQ Trigger: CTGTCTGCCACCAGGACCCCAGGGTATGTGACGAGC...GCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR CCA 90 bp | AGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTTGGAAGATGATGATCTaGCAGCGCTTGCGGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SEQGTRGQCPGSTHLFSPWKMMI*QRLRYR Trigger: CCTGTACCGCAAGCGCTGCCAGATCATCATCTTCCA...AGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| 3UTR CAA 72 bp | TCCTCCTTGGAAGTCTGCACACACCCAGACCGATCATaGCGTACACAGCAAGCCGAGTGCTTTTCACGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLEVCTHPDRS*RTQQAECFSRS Trigger: GGAGCGTGAAAAGCACTCGGCTTGCTGTGTACGCAATGATCGGTCTGGGTGTGTGCAGACTTCCAAGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
||
| CDS-3UTR TCA 90 bp | GTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCCGAGGGAGTCGGTTaGAACCTGAGCGGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VIMGTHVLNAQQCKRTTGAEGVG*NLSGSW Trigger: CCAGCTCCCGCTCAGGTTTCAACCGACTCCCTCGGC...TCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR TCA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCCCACGGCCAGGAGCTTaGAGAAGGCACGCCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTPRPGA*RRHARV Trigger: GACCCTGGCGTGCCTTCTTCAAGCTCCTGGCCGTGG...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR GCA 90 bp | CATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAATCCCATACCGCTGGCTaGAGTGACGGATGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HVLNAQQCKRTTGASKAQSHTAG*SDGCSC Trigger: GCAAGAGCATCCGTCACTGCAGCCAGCGGTATGGGA...TTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR GCA 90 bp | CATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGTGGGTCCTGACGCATaGAGGGTGAGAACTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HVLNAQQCKRTTGASKAQVGPDA*RVRTWH Trigger: GTGCCAAGTTCTCACCCTGCATGCGTCAGGACCCAC...TTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR CCA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCCATGCCCAGCTGGCATaGCCCCACGTAGAGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTHAQLA*PHVEGR Trigger: CCTCCCCTCTACGTGGGGCCATGCCAGCTGGGCATG...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR CCA 90 bp | CATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAAACCTGAGCGGGAGCTaGAGAAAGAGCAGAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HVLNAQQCKRTTGASKAQNLSGS*RKSRGR Trigger: CCTCCCTCTGCTCTTTCTCCAGCTCCCGCTCAGGTT...TTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR TCA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGTCCAGCTCCCGGATaGCCTGCGGCTTTAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTGPAPG*PAALAS Trigger: GGAAGCTAAAGCCGCAGGTCATCCGGGAGCTGGACC...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR CCA 90 bp | CATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAACCCGGAAGCTCATCTTaGCCACCGATTCACGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HVLNAQQCKRTTGASKAQPGSSS*PPIHVC Trigger: GCAAACGTGAATCGGTGGCCAAGATGAGCTTCCGGG...TTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR TCA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCTGTGTGATGGATGTCTaGCGCTGCAGCACCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTCVMDV*RCSTSR Trigger: CCGGCTGGTGCTGCAGCGTCAGACATCCATCACACA...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR TCA 90 bp | CATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAACAGAATGGTGACCAGTaGGTGCACAAAGGTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HVLNAQQCKRTTGASKAQQNGDQ*VHKGEP Trigger: TGGCTCACCTTTGTGCACTCACTGGTCACCATTCTG...TTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR TCA 90 bp | CATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAACACAGCCAGAATGGTaGCCAGTGAGTGCACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HVLNAQQCKRTTGASKAQTQPEW*PVSAQR Trigger: CCTTTGTGCACTCACTGGTCACCATTCTGGCTGTGT...TTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR GCA 90 bp | ATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCGGGGGTTTCTTGCGTTaGAGGCTGCTAGTACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MGTHVLNAQQCKRTTGASGGFLR*RLLVLS Trigger: AGACAGTACTAGCAGCCTGCAACGCAAGAAACCCCC...GCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR GCA 90 bp | ATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCGAGGTGGTGTCTCGGTaGTGGTTAGGGACACATTGT | + |
|
Preference number: 4 (lower is better) Translates to: MGTHVLNAQQCKRTTGASEVVSR*WLGTHC Trigger: ACAATGTGTCCCTAACCAGCACCGAGACACCACCTC...GCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCAGAGCAGAGGGAGGCTaGACCTGGTGTGACGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTRAEGG*TWCDGS Trigger: ACTCCCGTCACACCAGGTGCAGCCTCCCTCTGCTCT...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR GCA 90 bp | GTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAACGGACACCAAGCAGTaGAGGATCCCAGCGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIMGTHVLNAQQCKRTTGTDTKQ*RIPACR Trigger: CCTGCACGCTGGGATCCTGCACTGCTTGGTGTCCGT...TCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR GCA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGCCGGACCTACCTCTaGCCGGTATGGCAGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTGRTYL*PVWQED Trigger: ATCTTCCTGCCATACCGGGCAGAGGTAGGTCCGGCC...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR CCA 90 bp | GTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAACACATTGTCCTGGCTaGGCAGGTCCAGCTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VIMGTHVLNAQQCKRTTGTHCPG*AGPAPG Trigger: TCCGGGAGCTGGACCTGCCCAGCCAGGACAATGTGT...TCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCACACATTGTCCTGGCTaGGCAGGTCCAGCTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTTHCPG*AGPAPG Trigger: TCCGGGAGCTGGACCTGCCCAGCCAGGACAATGTGT...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR CCA 90 bp | GTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGATCCCCGCGCTGCTTTTaGTGCAGATCGGCCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VIMGTHVLNAQQCKRTTGSPRCF*CRSATW Trigger: CCAAGTGGCCGATCTGCACCAAAAGCAGCGCGGGGA...TCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR TCA 90 bp | GTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGAGTCGGTTGAAACCTaGGCGGGAGCTTCTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VIMGTHVLNAQQCKRTTGESVET*AGASAC Trigger: GCATGCAGAAGCTCCCGCTCAGGTTTCAACCGACTC...TCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146179.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCTCCCATACCGCTGGCTaGAGTGACGGATGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTSHTAG*SDGCSC Trigger: GCAAGAGCATCCGTCACTGCAGCCAGCGGTATGGGA...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCCCGGGCTGTCTCAGCTaGCATACTCACACTCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTPGCLS*HTHTPQ Trigger: TTGCGGAGTGTGAGTATGCCAGCTGAGACAGCCCGG...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGCTGCCACTTCTGGGTaGTGTCACTGTCCTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTAATSG*CHCPCS Trigger: TGAGCAAGGACAGTGACAGCACCCAGAAGTGGCAGC...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR GCA 90 bp | GTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGACTGTCTCTTGTTGCCTaGAAGGTCTGGGGCACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIMGTHVLNAQQCKRTTGLSLVA*KVWGTR Trigger: CCTAGTGCCCCAGACCTTGCAGGCAACAAGAGACAG...TCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR CCA 90 bp | GTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAACCCTGGGGTCCTGGTaGCAGACAGAACCAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VIMGTHVLNAQQCKRTTGTLGSW*QTEPNC Trigger: ACAGTTTGGTTCTGTCTGCCACCAGGACCCCAGGGT...TCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
||
| CDS-3UTR GCA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGGGGTTTCTTGCGTTaGAGGCTGCTAGTACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTGGFLR*RLLVLS Trigger: AGACAGTACTAGCAGCCTGCAACGCAAGAAACCCCC...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCCACAGACATCGTCCATaGAGTGCACCTGAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTHRHRP*SAPESR Trigger: TCTGCTCTCAGGTGCACTGCATGGACGATGTCTGTG...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR GCA 90 bp | GTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGATGCTGTCACTGTCCTTaGTCACTCCAAACCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VIMGTHVLNAQQCKRTTGCCHCP*SLQTSL Trigger: CAGACTGGTTTGGAGTGAGCAAGGACAGTGACAGCA...TCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS GCA 90 bp | GAAAGCCTGTCGCCGCAGGGGCTGCAGGAAGCTGGGCTCCTCTGCTaGCGGGGGCACCGCGGCTGGGATGTCCAACTTGAGCCATGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ESLSPQGLQEAGLLC*RGHRGWDVQLEPWG Trigger: CCCCCATGGCTCAAGTTGGACATCCCAGCCGCGGTGCCCCCGGCAGCAGAGGAGCCCAGCTTCCTGCAGCCCCTGCGGCGACAGGCTTTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000144902.2 ENSMUST00000146179.8 ENSMUST00000150381.2 |
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| CDS CCA 90 bp | GGGCTGCAGGAAGCTGGGCTCCTCTGCTGCCGGGGGCACCGCGGCTaGGATGTCCAACTTGAGCCATGGGGGTTTCTTGCGTTGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLQEAGLLCCRGHRG*DVQLEPWGFLALQA Trigger: AGCCTGCAACGCAAGAAACCCCCATGGCTCAAGTTGGACATCCCAGCCGCGGTGCCCCCGGCAGCAGAGGAGCCCAGCTTCCTGCAGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000144902.2 ENSMUST00000146179.8 ENSMUST00000150381.2 |
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| CDS GCA 90 bp | TGCCCAGCTGGCATGGCCCCACGTAGAGGGGAGGTGGTGTCTCGGTaGTGGTTAGGGACACATTGTCCTGGCTGGGCAGGTCCAGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CPAGMAPRRGEVVSR*WLGTHCPGWAGPAP Trigger: GGGAGCTGGACCTGCCCAGCCAGGACAATGTGTCCCTAACCAGCACCGAGACACCACCTCCCCTCTACGTGGGGCCATGCCAGCTGGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS CCA 90 bp | CCAGCTGGCATGGCCCCACGTAGAGGGGAGGTGGTGTCTCGGTGCTaGTTAGGGACACATTGTCCTGGCTGGGCAGGTCCAGCTCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PAGMAPRRGEVVSRC*LGTHCPGWAGPAPG Trigger: TCCGGGAGCTGGACCTGCCCAGCCAGGACAATGTGTCCCTAACCAGCACCGAGACACCACCTCCCCTCTACGTGGGGCCATGCCAGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS TCA 90 bp | GGATGTCTGACGCTGCAGCACCAGCCGGCGAGGCTCATGGTGGGGTaGTGGGACCCGGGCTGTCTCAGCTGGCATACTCACACTCCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GCLTLQHQPARLMVG*WDPGCLSWHTHTPQ Trigger: TTGCGGAGTGTGAGTATGCCAGCTGAGACAGCCCGGGTCCCATCACCCCACCATGAGCCTCGCCGGCTGGTGCTGCAGCGTCAGACATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 ENSMUST00000150381.2 |
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| CDS TCA 90 bp | CCAAAGCGTACCTGCCGGCTGCGGATGGTCTGTGTGATGGATGTCTaGCGCTGCAGCACCAGCCGGCGAGGCTCATGGTGGGGTGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: PKRTCRLRMVCVMDV*RCSTSRRGSWWGDG Trigger: CCCATCACCCCACCATGAGCCTCGCCGGCTGGTGCTGCAGCGTCAGACATCCATCACACAGACCATCCGCAGCCGGCAGGTACGCTTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150381.2 |
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| CDS TCA 90 bp | AACCAGTCTGCTGTCCCCCTGCGGATGGTCTGTGTGATGGATGTCTaGCGCTGCAGCACCAGCCGGCGAGGCTCATGGTGGGGTGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: NQSAVPLRMVCVMDV*RCSTSRRGSWWGDG Trigger: CCCATCACCCCACCATGAGCCTCGCCGGCTGGTGCTGCAGCGTCAGACATCCATCACACAGACCATCCGCAGGGGGACAGCAGACTGGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS TCA 90 bp | TGTCATCAGCCATGCGAAAGGCCCGGCCTCGGGCCAGAGGGTCTATaGTCTTCTGCATGCCCAGCTGGCATGGCCCCACGTAGAGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CHQPCERPGLGPEGL*SSACPAGMAPRRGE Trigger: CTCCCCTCTACGTGGGGCCATGCCAGCTGGGCATGCAGAAGATCATAGACCCTCTGGCCCGAGGCCGGGCCTTTCGCATGGCTGATGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS TCA 90 bp | GGGTGGGCCTTTCGAGCAGCCCTCGGCCTCAAAAGGGGCAGAGTATaGACACGCCCAAAGCGTACCTGCCGGCTGCGGATGGTCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GWAFRAALGLKRGRV*TRPKRTCRLRMVCV Trigger: CACACAGACCATCCGCAGCCGGCAGGTACGCTTTGGGCGTGTTCATACTCTGCCCCTTTTGAGGCCGAGGGCTGCTCGAAAGGCCCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150381.2 |
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| CDS CCA 90 bp | CTCTGCTGCCGGGGGCACCGCGGCTGGGATGTCCAACTTGAGCCATaGGGGTTTCTTGCGTTGCAGGCTGCTAGTACTGTCTCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LCCRGHRGWDVQLEP*GFLALQAASTVSPG Trigger: GCCAGGAGAGACAGTACTAGCAGCCTGCAACGCAAGAAACCCCCATGGCTCAAGTTGGACATCCCAGCCGCGGTGCCCCCGGCAGCAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000144902.2 ENSMUST00000146179.8 ENSMUST00000150381.2 |
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| CDS TCA 90 bp | TCCCGGATGACCTGCGGCTTTAGCTTCCCATACCGCTGGCTGCAGTaGCGGATGCTCTTGCGCTGCCACTTCTGGGTGCTGTCACTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRMTCGFSFPYRWLQ*RMLLRCHFWVLSLS Trigger: GGACAGTGACAGCACCCAGAAGTGGCAGCGCAAGAGCATCCGTCACTGCAGCCAGCGGTATGGGAAGCTAAAGCCGCAGGTCATCCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS TCA 90 bp | TGGTTAGGGACACATTGTCCTGGCTGGGCAGGTCCAGCTCCCGGATaGCCTGCGGCTTTAGCTTCCCATACCGCTGGCTGCAGTGACGGA | + |
|
Preference number: 5 (lower is better) Translates to: WLGTHCPGWAGPAPG*PAALASHTAGCSDG Trigger: TCCGTCACTGCAGCCAGCGGTATGGGAAGCTAAAGCCGCAGGTCATCCGGGAGCTGGACCTGCCCAGCCAGGACAATGTGTCCCTAACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS TCA 90 bp | TATGAACACGCCCAAAGCGTACCTGCCGGCTGCGGATGGTCTGTGTaGTGGATGTCTGACGCTGCAGCACCAGCCGGCGAGGCTCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: YEHAQSVPAGCGWSV*WMSDAAAPAGEAHG Trigger: ACCATGAGCCTCGCCGGCTGGTGCTGCAGCGTCAGACATCCATCACACAGACCATCCGCAGCCGGCAGGTACGCTTTGGGCGTGTTCATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150381.2 |
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| CDS GCA 90 bp | ACCGCTGGCTGCAGTGACGGATGCTCTTGCGCTGCCACTTCTGGGTaGTGTCACTGTCCTTGCTCACTCCAAACCAGTCTGCTGTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TAGCSDGCSCAATSG*CHCPCSLQTSLLSP Trigger: GGGGGACAGCAGACTGGTTTGGAGTGAGCAAGGACAGTGACAGCACCCAGAAGTGGCAGCGCAAGAGCATCCGTCACTGCAGCCAGCGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS GCA 90 bp | GACGGATGCTCTTGCGCTGCCACTTCTGGGTGCTGTCACTGTCCTTaGTCACTCCAAACCAGTCTGCTGTCCCCCTGCGGATGGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: DGCSCAATSGCCHCP*SLQTSLLSPCGWSV Trigger: CACAGACCATCCGCAGGGGGACAGCAGACTGGTTTGGAGTGAGCAAGGACAGTGACAGCACCCAGAAGTGGCAGCGCAAGAGCATCCGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS-3UTR CAA 90 bp | AGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGACCACGGCCAGGAGCTaGAAGAAGGCACGCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSVSVQPERARHKRSVSRTTARS*KKARQG Trigger: ACCCTGGCGTGCCTTCTTCAAGCTCCTGGCCGTGGT...CCTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS GCA 90 bp | GCGGCTTTAGCTTCCCATACCGCTGGCTGCAGTGACGGATGCTCTTaGGCTGCCACTTCTGGGTGCTGTCACTGTCCTTGCTCACTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AALASHTAGCSDGCS*AATSGCCHCPCSLQ Trigger: TTGGAGTGAGCAAGGACAGTGACAGCACCCAGAAGTGGCAGCGCAAGAGCATCCGTCACTGCAGCCAGCGGTATGGGAAGCTAAAGCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS-3UTR CAA 90 bp | AGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGATCTCACACCTGCCCTaGGTGCCGATGCAGCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSVSVQPERARHKRSVSRISHLP*VPMQQG Trigger: GCCTTGCTGCATCGGCACCAAGGGCAGGTGTGAGAT...CCTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR CAA 90 bp | CGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGGAGCCATGGGGGTTTCTaGCGTTGCAGGCTGCTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: RARHKRSVSRKHPSVQPWSHGGF*RCRLLV Trigger: TACTAGCAGCCTGCAACGCAAGAAACCCCCATGGCT...CCAGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR CAA 90 bp | AGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTGCCCGGAAGCTCATCTaGGCCACCGATTCACGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SEQGTRGQCPGSTHLFSPARKLI*ATDSRL Trigger: CAAACGTGAATCGGTGGCCAAGATGAGCTTCCGGGC...AGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR CAA 90 bp | AGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGGACGAGCACTCCTCCTaGGAAGTCTGCACACACCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSVSVQPERARHKRSVSRDEHSS*EVCTHP Trigger: TGGGTGTGTGCAGACTTCCAAGGAGGAGTGCTCGTC...CCTGGACACTGACCTCTTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR CAA 90 bp | AGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCTAGCCATGGGGGTTTCTaGCGTTGCAGGCTGCTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SEQGTRGQCPGSTHLFSPSHGGF*RCRLLV Trigger: TACTAGCAGCCTGCAACGCAAGAAACCCCCATGGCT...AGGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR CAA 90 bp | GAGCGAGCAAGGCACAAGAGGTCAGTGTCCAGGAAGCACCCATCTGTTCAGCCCGTGCTGTCACTGTCCTaGCTCACTCCAAACCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ERARHKRSVSRKHPSVQPVLSLS*LTPNQS Trigger: AGACTGGTTTGGAGTGAGCAAGGACAGTGACAGCAC...GGGCTGAACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR CAA 90 bp | CATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGGAGCGAGCAAGGCACAACTGGTTAGGGACACATaGTCCTGGCTGGGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HVLNAQQCKRTTGASKAQLVRDT*SWLGRS Trigger: GGACCTGCCCAGCCAGGACAATGTGTCCCTAACCAG...TTGTGCCTTGCTCGCTCCGGTTGTACGCTTACACTGCTGGGCATTTAGTACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS-3UTR CAA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCTTCCCCGCGCTGCTTTaGGTGCAGATCGGCCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTFPALL*VQIGHL Trigger: CAAGTGGCCGATCTGCACCAAAAGCAGCGCGGGGAA...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR CAA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCTCCCGAGCGAAGAGTTaGCGCACTGGCACAGCGATA | + |
|
Preference number: 5 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTSRAKS*RTGTAI Trigger: TATCGCTGTGCCAGTGCGCAAACTCTTCGCTCGGGA...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR CAA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCATGATCTGGCAGCGCTaGCGGTACAGGTCGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTMIWQR*RYRSNL Trigger: CAAGTTCGACCTGTACCGCAAGCGCTGCCAGATCAT...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS-3UTR CAA 90 bp | GAGGTTATCATGGGAACTCATGTACTAAATGCCCAGCAGTGTAAGCGTACAACCGTGCTGTCACTGTCCTaGCTCACTCCAAACCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EVIMGTHVLNAQQCKRTTVLSLS*LTPNQS Trigger: AGACTGGTTTGGAGTGAGCAAGGACAGTGACAGCAC...GGTTGTACGCTTACACTGCTGGGCATTTAGTACATGAGTTCCCATGATAACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020524.15 ENSMUST00000146179.8 |
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| CDS CCA 72 bp | GAAGCTGGGCTCCTCTGCTGCCGGGGGCACCGCGGCTaGGATGTCCAACTTGAGCCATGGGGGTTTCTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: EAGLLCCRGHRG*DVQLEPWGFLA Trigger: CGCAAGAAACCCCCATGGCTCAAGTTGGACATCCCAGCCGCGGTGCCCCCGGCAGCAGAGGAGCCCAGCTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000144902.2 ENSMUST00000146179.8 ENSMUST00000150381.2 |
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| CDS TCA 72 bp | GCTGTCCCCCTGCGGATGGTCTGTGTGATGGATGTCTaGCGCTGCAGCACCAGCCGGCGAGGCTCATGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: AVPLRMVCVMDV*RCSTSRRGSWW Trigger: CCACCATGAGCCTCGCCGGCTGGTGCTGCAGCGTCAGACATCCATCACACAGACCATCCGCAGGGGGACAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS TCA 72 bp | ACCTGCCGGCTGCGGATGGTCTGTGTGATGGATGTCTaGCGCTGCAGCACCAGCCGGCGAGGCTCATGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TCRLRMVCVMDV*RCSTSRRGSWW Trigger: CCACCATGAGCCTCGCCGGCTGGTGCTGCAGCGTCAGACATCCATCACACAGACCATCCGCAGCCGGCAGGT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150381.2 |
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| CDS TCA 72 bp | GCCCAAAGCGTACCTGCCGGCTGCGGATGGTCTGTGTaGTGGATGTCTGACGCTGCAGCACCAGCCGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: AQSVPAGCGWSV*WMSDAAAPAGE Trigger: CTCGCCGGCTGGTGCTGCAGCGTCAGACATCCATCACACAGACCATCCGCAGCCGGCAGGTACGCTTTGGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150381.2 |
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| CDS GCA 72 bp | GGCATGGCCCCACGTAGAGGGGAGGTGGTGTCTCGGTaGTGGTTAGGGACACATTGTCCTGGCTGGGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GMAPRRGEVVSR*WLGTHCPGWAG Trigger: ACCTGCCCAGCCAGGACAATGTGTCCCTAACCAGCACCGAGACACCACCTCCCCTCTACGTGGGGCCATGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS CCA 72 bp | AAACCTGAGCGGGAGCTTCTGCATGCCCAGCTGGCATaGCCCCACGTAGAGGGGAGGTGGTGTCTCGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: KPERELLHAQLA*PHVEGRWCLGA Trigger: AGCACCGAGACACCACCTCCCCTCTACGTGGGGCCATGCCAGCTGGGCATGCAGAAGCTCCCGCTCAGGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS CAA 72 bp | TCTGCTGCCGGGGGCACCGCGGCTGGGATGTCCAACTaGAGCCATGGGGGTTTCTTGCGTTGCAGGCTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SAAGGTAAGMSN*SHGGFLRCRLL Trigger: TAGCAGCCTGCAACGCAAGAAACCCCCATGGCTCAAGTTGGACATCCCAGCCGCGGTGCCCCCGGCAGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000144902.2 ENSMUST00000146179.8 ENSMUST00000150381.2 |
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| CDS CAA 72 bp | AGGGGAGGTGGTGTCTCGGTGCTGGTTAGGGACACATaGTCCTGGCTGGGCAGGTCCAGCTCCCGGATGACC | + |
|
Preference number: 6 (lower is better) Translates to: RGGGVSVLVRDT*SWLGRSSSRMT Trigger: GGTCATCCGGGAGCTGGACCTGCCCAGCCAGGACAATGTGTCCCTAACCAGCACCGAGACACCACCTCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS CAA 90 bp | CTGGGCTCCTCTGCTGCCGGGGGCACCGCGGCTGGGATGTCCAACTaGAGCCATGGGGGTTTCTTGCGTTGCAGGCTGCTAGTACTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGSSAAGGTAAGMSN*SHGGFLRCRLLVLS Trigger: AGACAGTACTAGCAGCCTGCAACGCAAGAAACCCCCATGGCTCAAGTTGGACATCCCAGCCGCGGTGCCCCCGGCAGCAGAGGAGCCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000144902.2 ENSMUST00000146179.8 ENSMUST00000150381.2 |
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| CDS TCA 72 bp | CAAACCAGTCTGCTGTCCCCCTGCGGATGGTCTGTGTaGTGGATGTCTGACGCTGCAGCACCAGCCGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: QTSLLSPCGWSV*WMSDAAAPAGE Trigger: CTCGCCGGCTGGTGCTGCAGCGTCAGACATCCATCACACAGACCATCCGCAGGGGGACAGCAGACTGGTTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS CCA 72 bp | CGGGGGCACCGCGGCTGGGATGTCCAACTTGAGCCATaGGGGTTTCTTGCGTTGCAGGCTGCTAGTACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RGHRGWDVQLEP*GFLALQAASTV Trigger: GACAGTACTAGCAGCCTGCAACGCAAGAAACCCCCATGGCTCAAGTTGGACATCCCAGCCGCGGTGCCCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000144902.2 ENSMUST00000146179.8 ENSMUST00000150381.2 |
||
| CDS CCA 72 bp | ATGGCCCCACGTAGAGGGGAGGTGGTGTCTCGGTGCTaGTTAGGGACACATTGTCCTGGCTGGGCAGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: MAPRRGEVVSRC*LGTHCPGWAGP Trigger: TGGACCTGCCCAGCCAGGACAATGTGTCCCTAACCAGCACCGAGACACCACCTCCCCTCTACGTGGGGCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS TCA 72 bp | ACCTGCGGCTTTAGCTTCCCATACCGCTGGCTGCAGTaGCGGATGCTCTTGCGCTGCCACTTCTGGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TCGFSFPYRWLQ*RMLLRCHFWVL Trigger: CAGCACCCAGAAGTGGCAGCGCAAGAGCATCCGTCACTGCAGCCAGCGGTATGGGAAGCTAAAGCCGCAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS TCA 72 bp | TTTCGAGCAGCCCTCGGCCTCAAAAGGGGCAGAGTATaGACACGCCCAAAGCGTACCTGCCGGCTGCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: FRAALGLKRGRV*TRPKRTCRLRM Trigger: CATCCGCAGCCGGCAGGTACGCTTTGGGCGTGTTCATACTCTGCCCCTTTTGAGGCCGAGGGCTGCTCGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150381.2 |
||
| CDS GCA 72 bp | GCTTCCCATACCGCTGGCTGCAGTGACGGATGCTCTTaGGCTGCCACTTCTGGGTGCTGTCACTGTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: ASHTAGCSDGCS*AATSGCCHCPC Trigger: GCAAGGACAGTGACAGCACCCAGAAGTGGCAGCGCAAGAGCATCCGTCACTGCAGCCAGCGGTATGGGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000146179.8 |
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| CDS CAA 72 bp | GCCACCGATTCACGTTTGCGACGCCGAGGGAGTCGGTaGAAACCTGAGCGGGAGCTGGAGAAAGAGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: ATDSRLRRRGSR*KPERELEKEQR Trigger: CCTCTGCTCTTTCTCCAGCTCCCGCTCAGGTTTCAACCGACTCCCTCGGCGTCGCAAACGTGAATCGGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020524.15 |
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| CDS CAA 72 bp | GCGGCTGGGATGTCCAACTTGAGCCATGGGGGTTTCTaGCGTTGCAGGCTGCTAGTACTGTCTCTCCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: AAGMSNLSHGGF*RCRLLVLSLLA Trigger: AGCCAGGAGAGACAGTACTAGCAGCCTGCAACGCAAGAAACCCCCATGGCTCAAGTTGGACATCCCAGCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000144902.2 ENSMUST00000146179.8 ENSMUST00000150381.2 |
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| CDS GCA 72 bp | GGGATGTCCAACTTGAGCCATGGGGGTTTCTTGCGTTaGAGGCTGCTAGTACTGTCTCTCCTGGCTTCACTC | + |
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Preference number: 6 (lower is better) Translates to: GMSNLSHGGFLR*RLLVLSLLASL Trigger: GAGTGAAGCCAGGAGAGACAGTACTAGCAGCCTGCAACGCAAGAAACCCCCATGGCTCAAGTTGGACATCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020524.15 ENSMUST00000132578.8 ENSMUST00000144902.2 ENSMUST00000146179.8 ENSMUST00000150381.2 |
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