Pregenerated sensors for RHBDD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026142Ensembl transcript IDs: ENSMUST00000027322.14, ENSMUST00000140020.2
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGGCCACTCTGGGAAGGCTGTGGGCTTCCTGGGACATGTCAGCTaGGCTTGTGCATCTGGGCACACAGGGGCCATGGAGTACTTGTTC | + |
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Preference number: 1 (lower is better) Translates to: TGHSGKAVGFLGHVS*ACASGHTGAMEYLF Trigger: GAACAAGTACTCCATGGCCCCTGTGTGCCCAGATGCACAAGCCCAGCTGACATGTCCCAGGAAGCCCACAGCCTTCCCAGAGTGGCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR CCA 90 bp | TTTAGGAGCGATCACGGGGCTAGACAGGCCACTCTGGGAAGGCTGTaGGCTTCCTGGGACATGTCAGCTGGGCTTGTGCATCTGGGCACA | + |
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Preference number: 1 (lower is better) Translates to: FRSDHGARQATLGRL*ASWDMSAGLVHLGT Trigger: TGTGCCCAGATGCACAAGCCCAGCTGACATGTCCCAGGAAGCCCACAGCCTTCCCAGAGTGGCCTGTCTAGCCCCGTGATCGCTCCTAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR CCA 90 bp | GTGACCTTTGGTTTAGGAGCGATCACGGGGCTAGACAGGCCACTCTaGGAAGGCTGTGGGCTTCCTGGGACATGTCAGCTGGGCTTGTGC | + |
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Preference number: 1 (lower is better) Translates to: VTFGLGAITGLDRPL*EGCGLPGTCQLGLC Trigger: GCACAAGCCCAGCTGACATGTCCCAGGAAGCCCACAGCCTTCCCAGAGTGGCCTGTCTAGCCCCGTGATCGCTCCTAAACCAAAGGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR GCA 90 bp | CTCTGGGAAGGCTGTGGGCTTCCTGGGACATGTCAGCTGGGCTTGTaGATCTGGGCACACAGGGGCCATGGAGTACTTGTTCATGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: LWEGCGLPGTCQLGL*IWAHRGHGVLVHGR Trigger: TCTGCCATGAACAAGTACTCCATGGCCCCTGTGTGCCCAGATGCACAAGCCCAGCTGACATGTCCCAGGAAGCCCACAGCCTTCCCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR CCA 90 bp | GAAGGCTGTGGGCTTCCTGGGACATGTCAGCTGGGCTTGTGCATCTaGGCACACAGGGGCCATGGAGTACTTGTTCATGGCAGACAAGAG | + |
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Preference number: 1 (lower is better) Translates to: EGCGLPGTCQLGLCI*AHRGHGVLVHGRQE Trigger: CTCTTGTCTGCCATGAACAAGTACTCCATGGCCCCTGTGTGCCCAGATGCACAAGCCCAGCTGACATGTCCCAGGAAGCCCACAGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR TCA 90 bp | CTTCCTATTAAGGGCCCAGGCTTTACCGCAGTGTGGATAAGCCACTaGGTCTGGAGGGAAGGAGAAAAGTGGAAATTGGTCCCATCTGAA | + |
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Preference number: 1 (lower is better) Translates to: LPIKGPGFTAVWISH*VWREGEKWKLVPSE Trigger: TTCAGATGGGACCAATTTCCACTTTTCTCCTTCCCTCCAGACTCAGTGGCTTATCCACACTGCGGTAAAGCCTGGGCCCTTAATAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR CCA 90 bp | ATATGCACGGGTTACAGACATTCCAGGTGGGTCCATATTAACAAGTaGGCATGGAGCTACACAGATGGCATGCACCAGATGTGTCAAATG | + |
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Preference number: 1 (lower is better) Translates to: ICTGYRHSRWVHINK*AWSYTDGMHQMCQM Trigger: CATTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATATGGACCCACCTGGAATGTCTGTAACCCGTGCATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR CCA 90 bp | GATTTGCTTAGTCCATTCATATGCACGGGTTACAGACATTCCAGGTaGGTCCATATTAACAAGTGGGCATGGAGCTACACAGATGGCATG | + |
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Preference number: 1 (lower is better) Translates to: DLLSPFICTGYRHSR*VHINKWAWSYTDGM Trigger: CATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATATGGACCCACCTGGAATGTCTGTAACCCGTGCATATGAATGGACTAAGCAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR CCA 90 bp | CAAATGCATACAGCAGAAACTGAGATGTTAATAGCCTTGAAATGTTaGCCTTGGGCACCAGTGCCTTTTAAAAATGAGCAGTTGTACCTT | + |
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Preference number: 1 (lower is better) Translates to: QMHTAETEMLIALKC*PWAPVPFKNEQLYL Trigger: AAGGTACAACTGCTCATTTTTAAAAGGCACTGGTGCCCAAGGCCAACATTTCAAGGCTATTAACATCTCAGTTTCTGCTGTATGCATTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR TCA 90 bp | GAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTaGGAGCCAGGGATAATTTACCTTGACCATTATAATTTAAATGTG | + |
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Preference number: 1 (lower is better) Translates to: EKVVSHCGMEGKCAA*EPGIIYLDHYNLNV Trigger: CACATTTAAATTATAATGGTCAAGGTAAATTATCCCTGGCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR CAA 90 bp | CCACTCTGGGAAGGCTGTGGGCTTCCTGGGACATGTCAGCTGGGCTaGTGCATCTGGGCACACAGGGGCCATGGAGTACTTGTTCATGGC | + |
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Preference number: 2 (lower is better) Translates to: PLWEGCGLPGTCQLG*CIWAHRGHGVLVHG Trigger: GCCATGAACAAGTACTCCATGGCCCCTGTGTGCCCAGATGCACAAGCCCAGCTGACATGTCCCAGGAAGCCCACAGCCTTCCCAGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGAAAGTCAGGTCCTATGTGCCTGTCCCCCAGAGCTGATGGGTATCGCCCTGGGCTTGTGCATCTaGGCACACAGGGGCCATGGA | + |
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Preference number: 2 (lower is better) Translates to: NKESQVLCACPPELMGIALGLCI*AHRGHG Trigger: TCCATGGCCCCTGTGTGCCCAGATGCACAAGCCCAG...GGCGATACCCATCAGCTCTGGGGGACAGGCACATAGGACCTGACTTTCTTTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR TCA 90 bp | AACAAAGAAAGTCAGGTCCTATGTGCCTGTCCCCCAGAGCTGATGGGTATCGCCCATGGCAGACAAGAGTaGCCTGCAACAGTAACCCTG | + |
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Preference number: 2 (lower is better) Translates to: NKESQVLCACPPELMGIAHGRQE*PATVTL Trigger: CAGGGTTACTGTTGCAGGTCACTCTTGTCTGCCATG...GGCGATACCCATCAGCTCTGGGGGACAGGCACATAGGACCTGACTTTCTTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGAAAGTCAGGTCCTATGTGCCTGTCCCCCAGAGCTGATGGGTATCGCCCCCCAGTCAACACGTTaGCTTTGCTCTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: NKESQVLCACPPELMGIAPQSTR*LCSVCV Trigger: CACACACACAGAGCAAAGCCAACGTGTTGACTGGGG...GGCGATACCCATCAGCTCTGGGGGACAGGCACATAGGACCTGACTTTCTTTGTT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR GCA 90 bp | AACAAAGAAAGTCAGGTCCTATGTGCCTGTCCCCCAGAGCTGATGGGTATCGCCTCCATCCTAGGTGTGTaGGTTGTGCATAGGAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: NKESQVLCACPPELMGIASILGV*VVHRKA Trigger: GGCTTTCCTATGCACAACGCACACACCTAGGATGGA...GGCGATACCCATCAGCTCTGGGGGACAGGCACATAGGACCTGACTTTCTTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCCCTGTCCCCCAGAGCTaGTGGGTATCGCCACTTAGT | + |
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Preference number: 2 (lower is better) Translates to: EKRLFLIVVWKANVQPESPVPQS*WVSPLS Trigger: ACTAAGTGGCGATACCCATCAGCTCTGGGGGACAGG...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGAAAGTCAGGTCCTATGTGCCTGTCCCCCAGAGCTGATGGGTATCGCCTGGAGTACTTGTTCATaGCAGACAAGAGTGACCTGC | + |
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Preference number: 2 (lower is better) Translates to: NKESQVLCACPPELMGIAWSTCS*QTRVTC Trigger: GCAGGTCACTCTTGTCTGCCATGAACAAGTACTCCA...GGCGATACCCATCAGCTCTGGGGGACAGGCACATAGGACCTGACTTTCTTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCGAGAACGGAACGCCCTaGGAAGGTAGCCACATCCTC | + |
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Preference number: 2 (lower is better) Translates to: EKRLFLIVVWKANVQPESENGTP*EGSHIL Trigger: GAGGATGTGGCTACCTTCCCAGGGCGTTCCGTTCTC...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCATACAGCAGAAACTGAGATGTTAATAGCCTTGAAATGTTGGCCTTGGGCATGGAGGGGGTGGCTCTaGACCCAAATTGCTGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: MHTAETEMLIALKCWPWAWRGWL*TQIAGA Trigger: GGCACCAGCAATTTGGGTTCAGAGCCACCCCCTCCA...TGCCCAAGGCCAACATTTCAAGGCTATTAACATCTCAGTTTCTGCTGTATGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCATACAGCAGAAACTGAGATGTTAATAGCCTTGAAATGTTGGCCTTGGGCAGCACCCGGAGGAGCCTaGGTGAAAGAGAACGGAACG | + |
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Preference number: 2 (lower is better) Translates to: MHTAETEMLIALKCWPWAAPGGA*VKENGT Trigger: CGTTCCGTTCTCTTTCACGCAGGCTCCTCCGGGTGC...TGCCCAAGGCCAACATTTCAAGGCTATTAACATCTCAGTTTCTGCTGTATGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCCATGGCAGACAAGAGTaGCCTGCAACAGTAACCCTG | + |
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Preference number: 2 (lower is better) Translates to: EKRLFLIVVWKANVQPESHGRQE*PATVTL Trigger: CAGGGTTACTGTTGCAGGTCACTCTTGTCTGCCATG...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTGCAGACTTGGTAGCCTaGGCACCCGGAGGAGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SQTKQPGTVTTLKLHVQAADLVA*APGGAC Trigger: GCAGGCTCCTCCGGGTGCTCAGGCTACCAAGTCTGC...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR CCA 90 bp | ATATTAACAAGTGGGCATGGAGCTACACAGATGGCATGCACCAGATGTGTCAAACTTCCCGCATCACCATaGAAACATGGTGGGAGGACC | + |
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Preference number: 2 (lower is better) Translates to: ILTSGHGATQMACTRCVKLPASP*KHGGRT Trigger: GGTCCTCCCACCATGTTTCCATGGTGATGCGGGAAG...TTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTGGCTGGCTTAGAACTCCATATGTAGACCAGGCTGGCTTTGAACTCATACCCCAGTCAACACGTTaGCTTTGCTCTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: CSGWLRTPYVDQAGFELIPQSTR*LCSVCV Trigger: CACACACACAGAGCAAAGCCAACGTGTTGACTGGGG...TATGAGTTCAAAGCCAGCCTGGTCTACATATGGAGTTCTAAGCCAGCCAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCAGATCCTCCTTCCTCTaGATCCTGAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: EKRLFLIVVWKANVQPESRSSFL*ILSAGI Trigger: AATCCCAGCACTCAGGATTCAGAGGAAGGAGGATCT...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGAAAGTCAGGTCCTATGTGCCTGTCCCCCAGAGCTGATGGGTATCGCCCTGAACCCAAATTGCTaGTGCCACATGATATCTAAT | + |
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Preference number: 2 (lower is better) Translates to: NKESQVLCACPPELMGIALNPNC*CHMISN Trigger: ATTAGATATCATGTGGCACCAGCAATTTGGGTTCAG...GGCGATACCCATCAGCTCTGGGGGACAGGCACATAGGACCTGACTTTCTTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCATACAGCAGAAACTGAGATGTTAATAGCCTTGAAATGTTGGCCTTGGGCATGCTCTGTGTGTGTGTaGCACCTGTTGCCGCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: MHTAETEMLIALKCWPWACSVCV*HLLPLC Trigger: ACAGAGCGGCAACAGGTGCCACACACACACAGAGCA...TGCCCAAGGCCAACATTTCAAGGCTATTAACATCTCAGTTTCTGCTGTATGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCATAGCCTTGAAATGTTaGCCTTGGGCACCAGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: EKRLFLIVVWKANVQPESIALKC*PWAPVP Trigger: AGGCACTGGTGCCCAAGGCCAACATTTCAAGGCTAT...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTGGCTGGCTTAGAACTCCATATGTAGACCAGGCTGGCTTTGAACTCATAAGCCAGAGTAGCCAATaGGAAGGCACTTTCATGAAG | + |
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Preference number: 2 (lower is better) Translates to: CSGWLRTPYVDQAGFELISQSSQ*EGTFMK Trigger: CTTCATGAAAGTGCCTTCTCATTGGCTACTCTGGCT...TATGAGTTCAAAGCCAGCCTGGTCTACATATGGAGTTCTAAGCCAGCCAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCGGCCTTGGGCACCAGTaGCTTTTAAAAATGAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: EKRLFLIVVWKANVQPESGLGHQ*LLKMSS Trigger: ACTGCTCATTTTTAAAAGGCACTGGTGCCCAAGGCC...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTCTGGGCTTGTGCATCTaGGCACACAGGGGCCATGGA | + |
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Preference number: 2 (lower is better) Translates to: SQTKQPGTVTTLKLHVQALGLCI*AHRGHG Trigger: TCCATGGCCCCTGTGTGCCCAGATGCACAAGCCCAG...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR CCA 90 bp | ATATTAACAAGTGGGCATGGAGCTACACAGATGGCATGCACCAGATGTGTCAAAATAGCCTTGAAATGTTaGCCTTGGGCACCAGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: ILTSGHGATQMACTRCVKIALKC*PWAPVP Trigger: AGGCACTGGTGCCCAAGGCCAACATTTCAAGGCTAT...TTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCATGGAGCTACACAGATaGCATGCACCAGATGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: EKRLFLIVVWKANVQPESMELHR*HAPDVS Trigger: TGACACATCTGGTGCATGCCATCTGTGTAGCTCCAT...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR TCA 90 bp | ATATTAACAAGTGGGCATGGAGCTACACAGATGGCATGCACCAGATGTGTCAAAATAAGGCAGGAGATGTaGACATCAGGCAGACTTGGT | + |
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Preference number: 2 (lower is better) Translates to: ILTSGHGATQMACTRCVKIRQEM*TSGRLG Trigger: ACCAAGTCTGCCTGATGTTCACATCTCCTGCCTTAT...TTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTAGGCTGTGGGCTTCCTaGGACATGTCAGCTGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SQTKQPGTVTTLKLHVQARLWAS*DMSAGL Trigger: AAGCCCAGCTGACATGTCCCAGGAAGCCCACAGCCT...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR CAA 90 bp | AGTAACAGGCCGTGGTCTAGGGTCACTCAGAACCACAGACATGACTaGGTGCAGGTATGCACAAATAAGAATAGTGACATAAGAGTGTTA | + |
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Preference number: 2 (lower is better) Translates to: SNRPWSRVTQNHRHD*VQVCTNKNSDIRVL Trigger: TAACACTCTTATGTCACTATTCTTATTTGTGCATACCTGCACCAAGTCATGTCTGTGGTTCTGAGTGACCCTAGACCACGGCCTGTTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTGGAGACTGGGAAGGTTaGAGGTCAGTAACAGGCCGT | + |
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Preference number: 2 (lower is better) Translates to: SQTKQPGTVTTLKLHVQAGDWEG*RSVTGR Trigger: ACGGCCTGTTACTGACCTTCAACCTTCCCAGTCTCC...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCATACAGCAGAAACTGAGATGTTAATAGCCTTGAAATGTTGGCCTTGGGCATGGAGTACTTGTTCATaGCAGACAAGAGTGACCTGC | + |
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Preference number: 2 (lower is better) Translates to: MHTAETEMLIALKCWPWAWSTCS*QTRVTC Trigger: GCAGGTCACTCTTGTCTGCCATGAACAAGTACTCCA...TGCCCAAGGCCAACATTTCAAGGCTATTAACATCTCAGTTTCTGCTGTATGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTACTCTGGGAAGGCTGTaGGCTTCCTGGGACATGTCA | + |
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Preference number: 2 (lower is better) Translates to: SQTKQPGTVTTLKLHVQATLGRL*ASWDMS Trigger: TGACATGTCCCAGGAAGCCCACAGCCTTCCCAGAGT...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCTATAAAGTAATCTTCTaGAAGCAGCAGACACTTGCA | + |
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Preference number: 2 (lower is better) Translates to: EKRLFLIVVWKANVQPESYKVIF*KQQTLA Trigger: TGCAAGTGTCTGCTGCTTTCAGAAGATTACTTTATA...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTGGCTGGCTTAGAACTCCATATGTAGACCAGGCTGGCTTTGAACTCATAACCATGCCCAGTCTATaGTTTTTCTTAATGGACAAA | + |
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Preference number: 2 (lower is better) Translates to: CSGWLRTPYVDQAGFELITMPSL*FFLMDK Trigger: TTTGTCCATTAAGAAAAATCATAGACTGGGCATGGT...TATGAGTTCAAAGCCAGCCTGGTCTACATATGGAGTTCTAAGCCAGCCAGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTAGATCCTCCTTCCTCTaGATCCTGAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: SQTKQPGTVTTLKLHVQARSSFL*ILSAGI Trigger: AATCCCAGCACTCAGGATTCAGAGGAAGGAGGATCT...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTTCCATCCTAGGTGTGTaGGTTGTGCATAGGAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: SQTKQPGTVTTLKLHVQASILGV*VVHRKA Trigger: GGCTTTCCTATGCACAACGCACACACCTAGGATGGA...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| 3UTR-3UTR GCA 90 bp | ATATTAACAAGTGGGCATGGAGCTACACAGATGGCATGCACCAGATGTGTCAAAAAATGTGTGCCACCATaGCCAGTCTATGATTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ILTSGHGATQMACTRCVKKCVPP*PVYDFS Trigger: AGAAAAATCATAGACTGGGCATGGTGGCACACATTT...TTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATAT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTAGCCAGAGTAGCCAATaGGAAGGCACTTTCATGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SQTKQPGTVTTLKLHVQASQSSQ*EGTFMK Trigger: CTTCATGAAAGTGCCTTCTCATTGGCTACTCTGGCT...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTTCAGGCACCATTGTCTaGATGCTTAGACTCCATGGA | + |
|
Preference number: 2 (lower is better) Translates to: SQTKQPGTVTTLKLHVQASGTIV*MLRLHG Trigger: TCCATGGAGTCTAAGCATTCAGACAATGGTGCCTGA...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR GCA 90 bp | ATATTAACAAGTGGGCATGGAGCTACACAGATGGCATGCACCAGATGTGTCAAAGCAACATCCTGTCTTTaGCTTTTTATTCTCAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: ILTSGHGATQMACTRCVKATSCL*LFILRT Trigger: TGTTCTGAGAATAAAAAGGCAAAGACAGGATGTTGC...TTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGCATACAGCAGAAACTGAGATGTTAATAGCCTTGAAATGTTGGCCTTGGGCAGCAACATCCTGTCTTTaGCTTTTTATTCTCAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: MHTAETEMLIALKCWPWAATSCL*LFILRT Trigger: TGTTCTGAGAATAAAAAGGCAAAGACAGGATGTTGC...TGCCCAAGGCCAACATTTCAAGGCTATTAACATCTCAGTTTCTGCTGTATGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTTTTCTCATTGTGGTATaGAAGGCAAATGTGCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SQTKQPGTVTTLKLHVQAFLIVV*KANVQP Trigger: AGGCTGCACATTTGCCTTCCATACCACAATGAGAAA...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTACCACAGACATGACTTaGTGCAGGTATGCACAAATA | + |
|
Preference number: 2 (lower is better) Translates to: SQTKQPGTVTTLKLHVQATTDMT*CRYAQI Trigger: TATTTGTGCATACCTGCACCAAGTCATGTCTGTGGT...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTCTGAACCCAAATTGCTaGTGCCACATGATATCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: SQTKQPGTVTTLKLHVQALNPNC*CHMISN Trigger: ATTAGATATCATGTGGCACCAGCAATTTGGGTTCAG...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR CCA 72 bp | GCTAGACAGGCCACTCTGGGAAGGCTGTGGGCTTCCTaGGACATGTCAGCTGGGCTTGTGCATCTGGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: ARQATLGRLWAS*DMSAGLVHLGT Trigger: TGTGCCCAGATGCACAAGCCCAGCTGACATGTCCCAGGAAGCCCACAGCCTTCCCAGAGTGGCCTGTCTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR CCA 72 bp | CATCTGGGCACACAGGGGCCATGGAGTACTTGTTCATaGCAGACAAGAGTGACCTGCAACAGTAACCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HLGTQGPWSTCS*QTRVTCNSNPV Trigger: CACAGGGTTACTGTTGCAGGTCACTCTTGTCTGCCATGAACAAGTACTCCATGGCCCCTGTGTGCCCAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR TCA 72 bp | AAGGGCCCAGGCTTTACCGCAGTGTGGATAAGCCACTaGGTCTGGAGGGAAGGAGAAAAGTGGAAATTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: KGPGFTAVWISH*VWREGEKWKLV Trigger: GACCAATTTCCACTTTTCTCCTTCCCTCCAGACTCAGTGGCTTATCCACACTGCGGTAAAGCCTGGGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAAAGAAAGTCAGGTCCTATGTGCCTGTCCCCCAGAGCTGATGGGTATCGCCCTACACCCATTCTCATaGGAAACTATGCAGGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: NKESQVLCACPPELMGIALHPFS*ETMQGG Trigger: CCCTCCCTGCATAGTTTCCAATGAGAATGGGTGTAG...GGCGATACCCATCAGCTCTGGGGGACAGGCACATAGGACCTGACTTTCTTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR TCA 72 bp | CTGGAGGGAAGGAGAAAAGTGGAAATTGGTCCCATCTaGAGAGGTGACCTTTGGTTTAGGAGCGATCACGGG | + |
|
Preference number: 3 (lower is better) Translates to: LEGRRKVEIGPI*RGDLWFRSDHG Trigger: CCCGTGATCGCTCCTAAACCAAAGGTCACCTCTTCAGATGGGACCAATTTCCACTTTTCTCCTTCCCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR CAA 90 bp | ATATTAACAAGTGGGCATGGAGCTACACAGATGGCATGCACCAGATGTGTCAAAACATGTCAGCTGGGCTaGTGCATCTGGGCACACAGG | + |
|
Preference number: 3 (lower is better) Translates to: ILTSGHGATQMACTRCVKTCQLG*CIWAHR Trigger: CCTGTGTGCCCAGATGCACAAGCCCAGCTGACATGT...TTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR TCA 72 bp | GTCGGAGGAACACCATTTGTTGCTCCTAACTCCCTTTaGTCTAAATCCTCCCTGACTCTGAGGAGGTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VGGTPFVAPNSL*SKSSLTLRRWQ Trigger: TTGCCACCTCCTCAGAGTCAGGGAGGATTTAGATCAAAGGGAGTTAGGAGCAACAAATGGTGTTCCTCCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR CCA 72 bp | GGTTACAGACATTCCAGGTGGGTCCATATTAACAAGTaGGCATGGAGCTACACAGATGGCATGCACCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: GYRHSRWVHINK*AWSYTDGMHQM Trigger: CATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATATGGACCCACCTGGAATGTCTGTAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR CCA 72 bp | GGGTTTTGGTGTATAAGGGTGTGTGTGTGTTCTGGCTaGCTTAGAACTCCATATGTAGACCAGGCTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GFWCIRVCVCSG*LRTPYVDQAGF Trigger: AAAGCCAGCCTGGTCTACATATGGAGTTCTAAGCCAGCCAGAACACACACACACCCTTATACACCAAAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCGGCTCTGAACCCAAATaGCTGGTGCCACATGATATC | + |
|
Preference number: 3 (lower is better) Translates to: EKRLFLIVVWKANVQPESGSEPK*LVPHDI Trigger: GATATCATGTGGCACCAGCAATTTGGGTTCAGAGCC...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR CAA 90 bp | ATATTAACAAGTGGGCATGGAGCTACACAGATGGCATGCACCAGATGTGTCAAAAATAGCCTTGAAATGTaGGCCTTGGGCACCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: ILTSGHGATQMACTRCVKNSLEM*ALGTSA Trigger: GGCACTGGTGCCCAAGGCCAACATTTCAAGGCTATT...TTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCGGAGAAAAGTGGAAATaGGTCCCATCTGAAGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: EKRLFLIVVWKANVQPESGEKWK*VPSEEV Trigger: CACCTCTTCAGATGGGACCAATTTCCACTTTTCTCC...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTGGCTGGCTTAGAACTCCATATGTAGACCAGGCTGGCTTTGAACTCATAGGAGAAAAGTGGAAATaGGTCCCATCTGAAGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CSGWLRTPYVDQAGFELIGEKWK*VPSEEV Trigger: CACCTCTTCAGATGGGACCAATTTCCACTTTTCTCC...TATGAGTTCAAAGCCAGCCTGGTCTACATATGGAGTTCTAAGCCAGCCAGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCATACAGCAGAAACTGAGATGTTAATAGCCTTGAAATGTTGGCCTTGGGCAACCCCAGTCAACACGTaGGCTTTGCTCTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: MHTAETEMLIALKCWPWATPVNT*ALLCVC Trigger: ACACACACAGAGCAAAGCCAACGTGTTGACTGGGGT...TGCCCAAGGCCAACATTTCAAGGCTATTAACATCTCAGTTTCTGCTGTATGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR CCA 72 bp | AGTCCATTCATATGCACGGGTTACAGACATTCCAGGTaGGTCCATATTAACAAGTGGGCATGGAGCTACACA | + |
|
Preference number: 3 (lower is better) Translates to: SPFICTGYRHSR*VHINKWAWSYT Trigger: TGTGTAGCTCCATGCCCACTTGTTAATATGGACCCACCTGGAATGTCTGTAACCCGTGCATATGAATGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTACATGTCAGCTGGGCTaGTGCATCTGGGCACACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SQTKQPGTVTTLKLHVQATCQLG*CIWAHR Trigger: CCTGTGTGCCCAGATGCACAAGCCCAGCTGACATGT...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCATACAGCAGAAACTGAGATGTTAATAGCCTTGAAATGTTGGCCTTGGGCAGGCTCTGAACCCAAATaGCTGGTGCCACATGATATC | + |
|
Preference number: 3 (lower is better) Translates to: MHTAETEMLIALKCWPWAGSEPK*LVPHDI Trigger: GATATCATGTGGCACCAGCAATTTGGGTTCAGAGCC...TGCCCAAGGCCAACATTTCAAGGCTATTAACATCTCAGTTTCTGCTGTATGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCCTTCCTCCCTCTTTTTaGAGACAGGGTTTTGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: EKRLFLIVVWKANVQPESLPPSF*RQGFGV Trigger: TACACCAAAACCCTGTCTCAAAAAAGAGGGAGGAAG...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR GCA 72 bp | ATATTAACAAGTGGGCATGGAGCTACACAGATGGCATaGACCAGATGTGTCAAATGCATACAGCAGAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: ILTSGHGATQMA*TRCVKCIQQKL Trigger: CAGTTTCTGCTGTATGCATTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR GCA 72 bp | GTCACTCAGAACCACAGACATGACTTGGTGCAGGTATaGACAAATAAGAATAGTGACATAAGAGTGTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VTQNHRHDLVQV*TNKNSDIRVLG Trigger: CCCTAACACTCTTATGTCACTATTCTTATTTGTGCATACCTGCACCAAGTCATGTCTGTGGTTCTGAGTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR CCA 72 bp | ACAGCAGAAACTGAGATGTTAATAGCCTTGAAATGTTaGCCTTGGGCACCAGTGCCTTTTAAAAATGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TAETEMLIALKC*PWAPVPFKNEQ Trigger: CTGCTCATTTTTAAAAGGCACTGGTGCCCAAGGCCAACATTTCAAGGCTATTAACATCTCAGTTTCTGCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCTATCTAATGAGTGAGTaGGGTTCTTTTCCTACCTTA | + |
|
Preference number: 3 (lower is better) Translates to: EKRLFLIVVWKANVQPESYLMSE*GSFPTL Trigger: TAAGGTAGGAAAAGAACCCAACTCACTCATTAGATA...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR TCA 72 bp | GTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTaGGAGCCAGGGATAATTTACCTTGACCATTATAAT | + |
|
Preference number: 3 (lower is better) Translates to: VSHCGMEGKCAA*EPGIIYLDHYN Trigger: ATTATAATGGTCAAGGTAAATTATCCCTGGCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR TCA 72 bp | AACCCAAATTGCTGGTGCCACATGATATCTAATGAGTaGGTTGGGTTCTTTTCCTACCTTAGATCTTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: NPNCWCHMISNE*VGFFSYLRSFL Trigger: TAAGAAAGATCTAAGGTAGGAAAAGAACCCAACTCACTCATTAGATATCATGTGGCACCAGCAATTTGGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR TCA 90 bp | GTAGCACTGCCCCTCCTGCTAAGCCAAGAACCTGGCATGCCAGGCAGAGTGAGGCCTGGGGTGCAGAAGTaGATGGCCACCAGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VALPLLLSQEPGMPGRVRPGVQK*MATSSA Trigger: GGCAGAGCTGGTGGCCATTCACTTCTGCACCCCAGG...CCTCACTCTGCCTGGCATGCCAGGTTCTTGGCTTAGCAGGAGGGGCAGTGCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCACTGCCCCTCCTGCTAAGCCAAGAACCTGGCATGCCAGGCAGAGTGAGGAATGCTCGTTCCAGCTaGTCCTCCTCGCTCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VALPLLLSQEPGMPGRVRNARSS*SSSLRP Trigger: GGGCCTGAGCGAGGAGGAGCAGCTGGAACGAGCATT...CCTCACTCTGCCTGGCATGCCAGGTTCTTGGCTTAGCAGGAGGGGCAGTGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGACCAGGGGTAGCACTGCCCCTCCTGCTAAGCCAAGAACCTGGCATGCCATGCCAGTCATCTCCGTaGTGCAGGGGAGAGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGPGVALPLLLSQEPGMPCQSSP*CRGESS Trigger: ACTGCTCTCTCCCCTGCACCACGGAGATGACTGGCA...TGGCATGCCAGGTTCTTGGCTTAGCAGGAGGGGCAGTGCTACCCCTGGTCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR CAA 72 bp | GAAGGCTGTGGGCTTCCTGGGACATGTCAGCTGGGCTaGTGCATCTGGGCACACAGGGGCCATGGAGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: EGCGLPGTCQLG*CIWAHRGHGVL Trigger: AAGTACTCCATGGCCCCTGTGTGCCCAGATGCACAAGCCCAGCTGACATGTCCCAGGAAGCCCACAGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR TCA 90 bp | GTAGCACTGCCCCTCCTGCTAAGCCAAGAACCTGGCATGCCAGGCAGAGTGAGGCCAATTTGGAACACTTaGGAGAGGAGCAGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VALPLLLSQEPGMPGRVRPIWNT*ERSRRR Trigger: CCTCCTCCTGCTCCTCTCTCAAGTGTTCCAAATTGG...CCTCACTCTGCCTGGCATGCCAGGTTCTTGGCTTAGCAGGAGGGGCAGTGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCACTGCCCCTCCTGCTAAGCCAAGAACCTGGCATGCCAGGCAGAGTGAGGTTCTTCAGAGGCCCCTaGGTGTACATCAGTCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: VALPLLLSQEPGMPGRVRFFRGP*VYISPT Trigger: GGTTGGACTGATGTACACGCAGGGGCCTCTGAAGAA...CCTCACTCTGCCTGGCATGCCAGGTTCTTGGCTTAGCAGGAGGGGCAGTGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGACCAGGGGTAGCACTGCCCCTCCTGCTAAGCCAAGAACCTGGCATGCCAATGTTGAAATACAAATaGCAGTCATCTCCGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGPGVALPLLLSQEPGMPMLKYK*QSSPWC Trigger: GCACCACGGAGATGACTGGCATTTGTATTTCAACAT...TGGCATGCCAGGTTCTTGGCTTAGCAGGAGGGGCAGTGCTACCCCTGGTCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR TCA 90 bp | AACAAAGAAAGTCAGGTCCTATGTGCCTGTCCCCCAGAGCTGATGGGTATCGCCCCAATTTGGAACACTTaGGAGAGGAGCAGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKESQVLCACPPELMGIAPIWNT*ERSRRR Trigger: CCTCCTCCTGCTCCTCTCTCAAGTGTTCCAAATTGG...GGCGATACCCATCAGCTCTGGGGGACAGGCACATAGGACCTGACTTTCTTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR TCA 90 bp | AACAAAGAAAGTCAGGTCCTATGTGCCTGTCCCCCAGAGCTGATGGGTATCGCCCTGCACACGTGTCCATaGTTTTCTTCAGAGGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NKESQVLCACPPELMGIALHTCP*FSSEAP Trigger: AGGGGCCTCTGAAGAAAATCATGGACACGTGTGCAG...GGCGATACCCATCAGCTCTGGGGGACAGGCACATAGGACCTGACTTTCTTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CCA 90 bp | AACAAAGAAAGTCAGGTCCTATGTGCCTGTCCCCCAGAGCTGATGGGTATCGCCCTCGGTCCCAGATGCTaGCTCTTAATGCTCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NKESQVLCACPPELMGIALGPRC*LLMLVP Trigger: TGGAACGAGCATTAAGAGCCAGCATCTGGGACCGAG...GGCGATACCCATCAGCTCTGGGGGACAGGCACATAGGACCTGACTTTCTTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCAATGCTCGTTCCAGCTaGTCCTCCTCGCTCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EKRLFLIVVWKANVQPESNARSS*SSSLRP Trigger: GGGCCTGAGCGAGGAGGAGCAGCTGGAACGAGCATT...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCTGCCAGTCATCTCCGTaGTGCAGGGGAGAGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EKRLFLIVVWKANVQPESCQSSP*CRGESS Trigger: ACTGCTCTCTCCCCTGCACCACGGAGATGACTGGCA...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR TCA 90 bp | AGAGTGACCTGCAACAGTAACCCTGTGCTCTTCTTTTGTTTAAAACCAATTAGGCCTGGGGTGCAGAAGTaGATGGCCACCAGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVTCNSNPVLFFCLKPIRPGVQK*MATSSA Trigger: GGCAGAGCTGGTGGCCATTCACTTCTGCACCCCAGG...CCTAATTGGTTTTAAACAAAAGAAGAGCACAGGGTTACTGTTGCAGGTCACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCAGGAAGTCCCTGGGGTaGAGAAGTGAATGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: EKRLFLIVVWKANVQPESRKSLG*RSEWPP Trigger: TGGTGGCCATTCACTTCTGCACCCCAGGGACTTCCT...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCCTGCACACGTGTCCATaGTTTTCTTCAGAGGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EKRLFLIVVWKANVQPESLHTCP*FSSEAP Trigger: AGGGGCCTCTGAAGAAAATCATGGACACGTGTGCAG...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCCAGTCATCTCCGTGGTaGAGGGGAGAGAGCAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKRLFLIVVWKANVQPESQSSPW*RGESSK Trigger: TTTACTGCTCTCTCCCCTGCACCACGGAGATGACTG...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCACGCTGATGCAGGAATaGTACAGGGGCTTCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EKRLFLIVVWKANVQPESTLMQE*YRGFQG Trigger: TCCTTGGAAGCCCCTGTACCATTCCTGCATCAGCGT...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CCA 90 bp | ATGCATACAGCAGAAACTGAGATGTTAATAGCCTTGAAATGTTGGCCTTGGGCAGGGTGCAGAAGTGAATaGCCACCAGCTCTGCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: MHTAETEMLIALKCWPWAGCRSE*PPALPN Trigger: GTTGGGCAGAGCTGGTGGCCATTCACTTCTGCACCC...TGCCCAAGGCCAACATTTCAAGGCTATTAACATCTCAGTTTCTGCTGTATGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCTGGCTGGCTTAGAACTCCATATGTAGACCAGGCTGGCTTTGAACTCATACCTCATTTCTTCTGGTaGGAGCCGGAACCCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: CSGWLRTPYVDQAGFELIPHFFW*EPEPIW Trigger: CCATATGGGTTCCGGCTCCCACCAGAAGAAATGAGG...TATGAGTTCAAAGCCAGCCTGGTCTACATATGGAGTTCTAAGCCAGCCAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR CAA 72 bp | GTTGTGCATAGGAAAGCCTGTCTACACCCATTCTCATaGGAAACTATGCAGGGAGGGTGCATAAGAGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVHRKACLHPFS*ETMQGGCIRVG Trigger: TCCGACTCTTATGCACCCTCCCTGCATAGTTTCCAATGAGAATGGGTGTAGACAGGCTTTCCTATGCACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCTGGCTGGCTTAGAACTCCATATGTAGACCAGGCTGGCTTTGAACTCATAGGCAAACAAAACTCCTaGGAAGCCCACAGCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSGWLRTPYVDQAGFELIGKQNS*EAHSTV Trigger: AACTGTGCTGTGGGCTTCTCAGGAGTTTTGTTTGCC...TATGAGTTCAAAGCCAGCCTGGTCTACATATGGAGTTCTAAGCCAGCCAGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CCA 90 bp | ATATTAACAAGTGGGCATGGAGCTACACAGATGGCATGCACCAGATGTGTCAAACTCGGTCCCAGATGCTaGCTCTTAATGCTCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILTSGHGATQMACTRCVKLGPRC*LLMLVP Trigger: TGGAACGAGCATTAAGAGCCAGCATCTGGGACCGAG...TTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR GCA 90 bp | ATGCATACAGCAGAAACTGAGATGTTAATAGCCTTGAAATGTTGGCCTTGGGCACAGTCATCTCCGTGGTaGAGGGGAGAGAGCAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: MHTAETEMLIALKCWPWAQSSPW*RGESSK Trigger: TTTACTGCTCTCTCCCCTGCACCACGGAGATGACTG...TGCCCAAGGCCAACATTTCAAGGCTATTAACATCTCAGTTTCTGCTGTATGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CCA 90 bp | ATGCATACAGCAGAAACTGAGATGTTAATAGCCTTGAAATGTTGGCCTTGGGCAACGCTGATGCAGGAATaGTACAGGGGCTTCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MHTAETEMLIALKCWPWATLMQE*YRGFQG Trigger: TCCTTGGAAGCCCCTGTACCATTCCTGCATCAGCGT...TGCCCAAGGCCAACATTTCAAGGCTATTAACATCTCAGTTTCTGCTGTATGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCTGGCTGGCTTAGAACTCCATATGTAGACCAGGCTGGCTTTGAACTCATACCTGCATTGTTAAAGTaGTTCTGCTGTCCTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSGWLRTPYVDQAGFELIPALLK*FCCPEG Trigger: GCCTTCAGGACAGCAGAACCACTTTAACAATGCAGG...TATGAGTTCAAAGCCAGCCTGGTCTACATATGGAGTTCTAAGCCAGCCAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCCCTGCATTGTTAAAGTaGTTCTGCTGTCCTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EKRLFLIVVWKANVQPESPALLK*FCCPEG Trigger: GCCTTCAGGACAGCAGAACCACTTTAACAATGCAGG...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CCA 90 bp | ATATTAACAAGTGGGCATGGAGCTACACAGATGGCATGCACCAGATGTGTCAAAGAGCCGGAACCCATATaGCATTGGACCATTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILTSGHGATQMACTRCVKEPEPI*HWTISG Trigger: ACCAGAAATGGTCCAATGCCATATGGGTTCCGGCTC...TTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCTGGCTGGCTTAGAACTCCATATGTAGACCAGGCTGGCTTTGAACTCATACAGCACAGTTCCTTTTaGAGTCAGGCTGATTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSGWLRTPYVDQAGFELIQHSSF*SQADSR Trigger: TCTTGAATCAGCCTGACTTCAAAAGGAACTGTGCTG...TATGAGTTCAAAGCCAGCCTGGTCTACATATGGAGTTCTAAGCCAGCCAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR TCA 90 bp | ATATTAACAAGTGGGCATGGAGCTACACAGATGGCATGCACCAGATGTGTCAAATGGCCATCAAATCTGTaGAGACGCTGTCTCCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ILTSGHGATQMACTRCVKWPSNL*RRCLLI Trigger: AATGAGGAGACAGCGTCTTCACAGATTTGATGGCCA...TTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCTGGCTGGCTTAGAACTCCATATGTAGACCAGGCTGGCTTTGAACTCATATCGGCAACAGTAAACTaGAAGAGCAAATACACCACC | + |
|
Preference number: 4 (lower is better) Translates to: CSGWLRTPYVDQAGFELISATVN*KSKYTT Trigger: GGTGGTGTATTTGCTCTTGCAGTTTACTGTTGCCGA...TATGAGTTCAAAGCCAGCCTGGTCTACATATGGAGTTCTAAGCCAGCCAGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CCA 90 bp | ATATTAACAAGTGGGCATGGAGCTACACAGATGGCATGCACCAGATGTGTCAAAGCATTGGACCATTTCTaGTATTTCCTCGGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILTSGHGATQMACTRCVKALDHF*YFLGPR Trigger: TCTGGGACCGAGGAAATACCAGAAATGGTCCAATGC...TTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| 3UTR CAA 72 bp | CCGTGGTCTAGGGTCACTCAGAACCACAGACATGACTaGGTGCAGGTATGCACAAATAAGAATAGTGACATA | + |
|
Preference number: 4 (lower is better) Translates to: PWSRVTQNHRHD*VQVCTNKNSDI Trigger: TATGTCACTATTCTTATTTGTGCATACCTGCACCAAGTCATGTCTGTGGTTCTGAGTGACCCTAGACCACGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR TCA 90 bp | ATATTAACAAGTGGGCATGGAGCTACACAGATGGCATGCACCAGATGTGTCAAACAGCACAGTTCCTTTTaGAGTCAGGCTGATTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILTSGHGATQMACTRCVKQHSSF*SQADSR Trigger: TCTTGAATCAGCCTGACTTCAAAAGGAACTGTGCTG...TTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR TCA 90 bp | ATGCATACAGCAGAAACTGAGATGTTAATAGCCTTGAAATGTTGGCCTTGGGCATGGCCATCAAATCTGTaGAGACGCTGTCTCCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: MHTAETEMLIALKCWPWAWPSNL*RRCLLI Trigger: AATGAGGAGACAGCGTCTTCACAGATTTGATGGCCA...TGCCCAAGGCCAACATTTCAAGGCTATTAACATCTCAGTTTCTGCTGTATGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAGGTTGTTTCTCATTGTGGTATGGAAGGCAAATGTGCAGCCTGAGAGCATGTTGAAATACAAATaGCAGTCATCTCCGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKRLFLIVVWKANVQPESMLKYK*QSSPWC Trigger: GCACCACGGAGATGACTGGCATTTGTATTTCAACAT...GCTCTCAGGCTGCACATTTGCCTTCCATACCACAATGAGAAACAACCTTTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR GCA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTAGGAAGTCCCTGGGGTaGAGAAGTGAATGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SQTKQPGTVTTLKLHVQARKSLG*RSEWPP Trigger: TGGTGGCCATTCACTTCTGCACCCCAGGGACTTCCT...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR GCA 90 bp | ATATTAACAAGTGGGCATGGAGCTACACAGATGGCATGCACCAGATGTGTCAAACATAGGTCACTGGTCTaGCATCTGCATAGTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILTSGHGATQMACTRCVKHRSLV*HLHSDS Trigger: AGAATCACTATGCAGATGGCAGACCAGTGACCTATG...TTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTGACCTGCAACAGTAACCCTGTGCTCTTCTTTTGTTTAAAACCAATTAGGGAGCCGGAACCCATATaGCATTGGACCATTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVTCNSNPVLFFCLKPIREPEPI*HWTISG Trigger: ACCAGAAATGGTCCAATGCCATATGGGTTCCGGCTC...CCTAATTGGTTTTAAACAAAAGAAGAGCACAGGGTTACTGTTGCAGGTCACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR GCA 90 bp | ATGCATACAGCAGAAACTGAGATGTTAATAGCCTTGAAATGTTGGCCTTGGGCAAATGGCCACCAGCTCTaGCCAACAAGCAAATCTATT | + |
|
Preference number: 4 (lower is better) Translates to: MHTAETEMLIALKCWPWANGHQL*PTSKSI Trigger: AATAGATTTGCTTGTTGGGCAGAGCTGGTGGCCATT...TGCCCAAGGCCAACATTTCAAGGCTATTAACATCTCAGTTTCTGCTGTATGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR GCA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTTTCTTCAGAGGCCCCTaGGTGTACATCAGTCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: SQTKQPGTVTTLKLHVQAFFRGP*VYISPT Trigger: GGTTGGACTGATGTACACGCAGGGGCCTCTGAAGAA...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTGACCTGCAACAGTAACCCTGTGCTCTTCTTTTGTTTAAAACCAATTAGGGCATTGGACCATTTCTaGTATTTCCTCGGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RVTCNSNPVLFFCLKPIRALDHF*YFLGPR Trigger: TCTGGGACCGAGGAAATACCAGAAATGGTCCAATGC...CCTAATTGGTTTTAAACAAAAGAAGAGCACAGGGTTACTGTTGCAGGTCACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CCA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTCCTCATTTCTTCTGGTaGGAGCCGGAACCCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: SQTKQPGTVTTLKLHVQAPHFFW*EPEPIW Trigger: CCATATGGGTTCCGGCTCCCACCAGAAGAAATGAGG...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR GCA 90 bp | AGAGTGACCTGCAACAGTAACCCTGTGCTCTTCTTTTGTTTAAAACCAATTAGGAATGGCCACCAGCTCTaGCCAACAAGCAAATCTATT | + |
|
Preference number: 4 (lower is better) Translates to: RVTCNSNPVLFFCLKPIRNGHQL*PTSKSI Trigger: AATAGATTTGCTTGTTGGGCAGAGCTGGTGGCCATT...CCTAATTGGTTTTAAACAAAAGAAGAGCACAGGGTTACTGTTGCAGGTCACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR GCA 90 bp | AGAGTGACCTGCAACAGTAACCCTGTGCTCTTCTTTTGTTTAAAACCAATTAGGCATAGGTCACTGGTCTaGCATCTGCATAGTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVTCNSNPVLFFCLKPIRHRSLV*HLHSDS Trigger: AGAATCACTATGCAGATGGCAGACCAGTGACCTATG...CCTAATTGGTTTTAAACAAAAGAAGAGCACAGGGTTACTGTTGCAGGTCACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGACCAGGGGTAGCACTGCCCCTCCTGCTAAGCCAAGAACCTGGCATGCCAAGGAAGAACCAGACGTaGACAGCCAAGGTTGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGPGVALPLLLSQEPGMPRKNQT*TAKVAR Trigger: CCTCGCAACCTTGGCTGTCAACGTCTGGTTCTTCCT...TGGCATGCCAGGTTCTTGGCTTAGCAGGAGGGGCAGTGCTACCCCTGGTCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS CCA 90 bp | CAGTCCAACCAGAATGCCGGCCAGGTGCCCAGCAAAGGAAGTCCCTaGGGTGCAGAAGTGAATGGCCACCAGCTCTGCCCAACAAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QSNQNAGQVPSKGSP*GAEVNGHQLCPTSK Trigger: TTTGCTTGTTGGGCAGAGCTGGTGGCCATTCACTTCTGCACCCCAGGGACTTCCTTTGCTGGGCACCTGGCCGGCATTCTGGTTGGACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGACCAGGGGTAGCACTGCCCCTCCTGCTAAGCCAAGAACCTGGCATGCCAGGAACCCATATGGCATaGGACCATTTCTGGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGPGVALPLLLSQEPGMPGTHMA*DHFWYF Trigger: GAAATACCAGAAATGGTCCAATGCCATATGGGTTCC...TGGCATGCCAGGTTCTTGGCTTAGCAGGAGGGGCAGTGCTACCCCTGGTCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS TCA 90 bp | GCGAGGGTAACAGGCGGAATGTTGTTGATCCCAATTTGGAACACTTaGGAGAGGAGCAGGAGGAGGCCGGTGTTGATCCCTCTCGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ARVTGGMLLIPIWNT*ERSRRRPVLIPLVL Trigger: GAGAACGAGAGGGATCAACACCGGCCTCCTCCTGCTCCTCTCTCAAGTGTTCCAAATTGGGATCAACAACATTCCGCCTGTTACCCTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS GCA 90 bp | ACCCATATGGCATTGGACCATTTCTGGTATTTCCTCGGTCCCAGATaGTGGCTCTTAATGCTCGTTCCAGCTGCTCCTCCTCGCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: THMALDHFWYFLGPR*WLLMLVPAAPPRSG Trigger: GCCTGAGCGAGGAGGAGCAGCTGGAACGAGCATTAAGAGCCAGCATCTGGGACCGAGGAAATACCAGAAATGGTCCAATGCCATATGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS CCA 90 bp | AAGACGCTGTCTCCTCATTTCTTCTGGTGGGAGCCGGAACCCATATaGCATTGGACCATTTCTGGTATTTCCTCGGTCCCAGATGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KTLSPHFFWWEPEPI*HWTISGISSVPDAG Trigger: GCCAGCATCTGGGACCGAGGAAATACCAGAAATGGTCCAATGCCATATGGGTTCCGGCTCCCACCAGAAGAAATGAGGAGACAGCGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS GCA 90 bp | GGGCTTCCAAGGATTCAGGAAGAACCAGACGTTGACAGCCAAGGTTaGGAGGGTAACAGGCGGAATGTTGTTGATCCCAATTTGGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: GLPRIQEEPDVDSQG*EGNRRNVVDPNLEH Trigger: GTGTTCCAAATTGGGATCAACAACATTCCGCCTGTTACCCTCGCAACCTTGGCTGTCAACGTCTGGTTCTTCCTGAATCCTTGGAAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS CCA 90 bp | GGGCCTGCATTGTTAAAGTGGTTCTGCTGTCCTGAAGGCCCAGCGTaGGAGATAAAAATGCCTGCACACGTGTCCATGATTTTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPALLKWFCCPEGPA*EIKMPAHVSMIFFR Trigger: TCTGAAGAAAATCATGGACACGTGTGCAGGCATTTTTATCTCCCACGCTGGGCCTTCAGGACAGCAGAACCACTTTAACAATGCAGGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS CCA 90 bp | CGCTGTGTAGACATCATAGTTCCTGTAAGTTGCATCATAGGTCACTaGTCTGCCATCTGCATAGTGATTCTGATATCCGGAGGGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RCVDIIVPVSCIIGH*SAICIVILISGGAC Trigger: GCAGGCCCCTCCGGATATCAGAATCACTATGCAGATGGCAGACCAGTGACCTATGATGCAACTTACAGGAACTATGATGTCTACACAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS GCA 90 bp | CTCCTCGCTCAGGCCCGCTGTGTAGACATCATAGTTCCTGTAAGTTaGATCATAGGTCACTGGTCTGCCATCTGCATAGTGATTCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: LLAQARCVDIIVPVS*IIGHWSAICIVILI Trigger: TATCAGAATCACTATGCAGATGGCAGACCAGTGACCTATGATGCAACTTACAGGAACTATGATGTCTACACAGCGGGCCTGAGCGAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS GCA 90 bp | TGTAGACATCATAGTTCCTGTAAGTTGCATCATAGGTCACTGGTCTaGCATCTGCATAGTGATTCTGATATCCGGAGGGGCCTGCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: CRHHSSCKLHHRSLV*HLHSDSDIRRGLHC Trigger: ACAATGCAGGCCCCTCCGGATATCAGAATCACTATGCAGATGGCAGACCAGTGACCTATGATGCAACTTACAGGAACTATGATGTCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS GCA 90 bp | ATCATAGTTCCTGTAAGTTGCATCATAGGTCACTGGTCTGCCATCTaGATAGTGATTCTGATATCCGGAGGGGCCTGCATTGTTAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IIVPVSCIIGHWSAI*IVILISGGACIVKV Trigger: CACTTTAACAATGCAGGCCCCTCCGGATATCAGAATCACTATGCAGATGGCAGACCAGTGACCTATGATGCAACTTACAGGAACTATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
||
| CDS-3UTR CAA 90 bp | TGTTCTGGCTGGCTTAGAACTCCATATGTAGACCAGGCTGGCTTTGAACTCATAGTAACAGGCGGAATGTaGTTGATCCCAATTTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CSGWLRTPYVDQAGFELIVTGGM*LIPIWN Trigger: GTTCCAAATTGGGATCAACAACATTCCGCCTGTTAC...TATGAGTTCAAAGCCAGCCTGGTCTACATATGGAGTTCTAAGCCAGCCAGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS-3UTR CAA 90 bp | ATATTAACAAGTGGGCATGGAGCTACACAGATGGCATGCACCAGATGTGTCAAAGTAACAGGCGGAATGTaGTTGATCCCAATTTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: ILTSGHGATQMACTRCVKVTGGM*LIPIWN Trigger: GTTCCAAATTGGGATCAACAACATTCCGCCTGTTAC...TTTGACACATCTGGTGCATGCCATCTGTGTAGCTCCATGCCCACTTGTTAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS-3UTR CAA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTAGGAAGAACCAGACGTaGACAGCCAAGGTTGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: SQTKQPGTVTTLKLHVQARKNQT*TAKVAR Trigger: CCTCGCAACCTTGGCTGTCAACGTCTGGTTCTTCCT...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS-3UTR CAA 90 bp | AGTCAAACAAAGCAACCAGGTACTGTTACTACATTAAAGCTACATGTACAAGCTCCGGAGGGGCCTGCATaGTTAAAGTGGTTCTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SQTKQPGTVTTLKLHVQAPEGPA*LKWFCC Trigger: ACAGCAGAACCACTTTAACAATGCAGGCCCCTCCGG...AGCTTGTACATGTAGCTTTAATGTAGTAACAGTACCTGGTTGCTTTGTTTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS-3UTR CAA 90 bp | AGAGTGACCTGCAACAGTAACCCTGTGCTCTTCTTTTGTTTAAAACCAATTAGGGGAACCCATATGGCATaGGACCATTTCTGGTATTTC | + |
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Preference number: 5 (lower is better) Translates to: RVTCNSNPVLFFCLKPIRGTHMA*DHFWYF Trigger: GAAATACCAGAAATGGTCCAATGCCATATGGGTTCC...CCTAATTGGTTTTAAACAAAAGAAGAGCACAGGGTTACTGTTGCAGGTCACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS GCA 72 bp | TGCCGGCCAGGTGCCCAGCAAAGGAAGTCCCTGGGGTaGAGAAGTGAATGGCCACCAGCTCTGCCCAACAAG | + |
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Preference number: 6 (lower is better) Translates to: CRPGAQQRKSLG*RSEWPPALPNK Trigger: CTTGTTGGGCAGAGCTGGTGGCCATTCACTTCTGCACCCCAGGGACTTCCTTTGCTGGGCACCTGGCCGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS GCA 72 bp | TCAGAGGCCCCTGCGTGTACATCAGTCCAACCAGAATaGCGGCCAGGTGCCCAGCAAAGGAAGTCCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SEAPACTSVQPE*RPGAQQRKSLG Trigger: CCCCAGGGACTTCCTTTGCTGGGCACCTGGCCGGCATTCTGGTTGGACTGATGTACACGCAGGGGCCTCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS CCA 72 bp | CAGAATGCCGGCCAGGTGCCCAGCAAAGGAAGTCCCTaGGGTGCAGAAGTGAATGGCCACCAGCTCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: QNAGQVPSKGSP*GAEVNGHQLCP Trigger: TGGGCAGAGCTGGTGGCCATTCACTTCTGCACCCCAGGGACTTCCTTTGCTGGGCACCTGGCCGGCATTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS TCA 72 bp | GGAGGGGCCTGCATTGTTAAAGTGGTTCTGCTGTCCTaGAGGCCCAGCGTGGGAGATAAAAATGCCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: GGACIVKVVLLS*RPSVGDKNACT Trigger: TGTGCAGGCATTTTTATCTCCCACGCTGGGCCTTCAGGACAGCAGAACCACTTTAACAATGCAGGCCCCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS CCA 72 bp | TTGGACCATTTCTGGTATTTCCTCGGTCCCAGATGCTaGCTCTTAATGCTCGTTCCAGCTGCTCCTCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: LDHFWYFLGPRC*LLMLVPAAPPR Trigger: GCGAGGAGGAGCAGCTGGAACGAGCATTAAGAGCCAGCATCTGGGACCGAGGAAATACCAGAAATGGTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS CAA 72 bp | TACAGGGGCTTCCAAGGATTCAGGAAGAACCAGACGTaGACAGCCAAGGTTGCGAGGGTAACAGGCGGAATG | + |
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Preference number: 6 (lower is better) Translates to: YRGFQGFRKNQT*TAKVARVTGGM Trigger: CATTCCGCCTGTTACCCTCGCAACCTTGGCTGTCAACGTCTGGTTCTTCCTGAATCCTTGGAAGCCCCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS TCA 72 bp | ACAGGCGGAATGTTGTTGATCCCAATTTGGAACACTTaGGAGAGGAGCAGGAGGAGGCCGGTGTTGATCCCT | + |
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Preference number: 6 (lower is better) Translates to: TGGMLLIPIWNT*ERSRRRPVLIP Trigger: AGGGATCAACACCGGCCTCCTCCTGCTCCTCTCTCAAGTGTTCCAAATTGGGATCAACAACATTCCGCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS GCA 72 bp | GCATTGGACCATTTCTGGTATTTCCTCGGTCCCAGATaGTGGCTCTTAATGCTCGTTCCAGCTGCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: ALDHFWYFLGPR*WLLMLVPAAPP Trigger: AGGAGGAGCAGCTGGAACGAGCATTAAGAGCCAGCATCTGGGACCGAGGAAATACCAGAAATGGTCCAATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS CCA 72 bp | GTGGGAGCCGGAACCCATATGGCATTGGACCATTTCTaGTATTTCCTCGGTCCCAGATGCTGGCTCTTAATG | + |
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Preference number: 6 (lower is better) Translates to: VGAGTHMALDHF*YFLGPRCWLLM Trigger: CATTAAGAGCCAGCATCTGGGACCGAGGAAATACCAGAAATGGTCCAATGCCATATGGGTTCCGGCTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS CAA 90 bp | CAGGAATGGTACAGGGGCTTCCAAGGATTCAGGAAGAACCAGACGTaGACAGCCAAGGTTGCGAGGGTAACAGGCGGAATGTTGTTGATC | + |
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Preference number: 6 (lower is better) Translates to: QEWYRGFQGFRKNQT*TAKVARVTGGMLLI Trigger: GATCAACAACATTCCGCCTGTTACCCTCGCAACCTTGGCTGTCAACGTCTGGTTCTTCCTGAATCCTTGGAAGCCCCTGTACCATTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS CAA 90 bp | GCTGTCTCCTCATTTCTTCTGGTGGGAGCCGGAACCCATATGGCATaGGACCATTTCTGGTATTTCCTCGGTCCCAGATGCTGGCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: AVSSFLLVGAGTHMA*DHFWYFLGPRCWLL Trigger: TAAGAGCCAGCATCTGGGACCGAGGAAATACCAGAAATGGTCCAATGCCATATGGGTTCCGGCTCCCACCAGAAGAAATGAGGAGACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS CCA 72 bp | CATTTCTTCTGGTGGGAGCCGGAACCCATATGGCATTaGACCATTTCTGGTATTTCCTCGGTCCCAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: HFFWWEPEPIWH*TISGISSVPDA Trigger: AGCATCTGGGACCGAGGAAATACCAGAAATGGTCCAATGCCATATGGGTTCCGGCTCCCACCAGAAGAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS CCA 72 bp | TCTCCTCATTTCTTCTGGTGGGAGCCGGAACCCATATaGCATTGGACCATTTCTGGTATTTCCTCGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SPHFFWWEPEPI*HWTISGISSVP Trigger: TGGGACCGAGGAAATACCAGAAATGGTCCAATGCCATATGGGTTCCGGCTCCCACCAGAAGAAATGAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS CAA 72 bp | TCATTTCTTCTGGTGGGAGCCGGAACCCATATGGCATaGGACCATTTCTGGTATTTCCTCGGTCCCAGATGC | + |
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Preference number: 6 (lower is better) Translates to: SFLLVGAGTHMA*DHFWYFLGPRC Trigger: GCATCTGGGACCGAGGAAATACCAGAAATGGTCCAATGCCATATGGGTTCCGGCTCCCACCAGAAGAAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS CAA 90 bp | CCTCCTCGCTCAGGCCCGCTGTGTAGACATCATAGTTCCTGTAAGTaGCATCATAGGTCACTGGTCTGCCATCTGCATAGTGATTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: PPRSGPLCRHHSSCK*HHRSLVCHLHSDSD Trigger: ATCAGAATCACTATGCAGATGGCAGACCAGTGACCTATGATGCAACTTACAGGAACTATGATGTCTACACAGCGGGCCTGAGCGAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS GCA 72 bp | AGGATTCAGGAAGAACCAGACGTTGACAGCCAAGGTTaGGAGGGTAACAGGCGGAATGTTGTTGATCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: RIQEEPDVDSQG*EGNRRNVVDPN Trigger: ATTGGGATCAACAACATTCCGCCTGTTACCCTCGCAACCTTGGCTGTCAACGTCTGGTTCTTCCTGAATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS GCA 72 bp | CCTGTAAGTTGCATCATAGGTCACTGGTCTGCCATCTaGATAGTGATTCTGATATCCGGAGGGGCCTGCATT | + |
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Preference number: 6 (lower is better) Translates to: PVSCIIGHWSAI*IVILISGGACI Trigger: AATGCAGGCCCCTCCGGATATCAGAATCACTATGCAGATGGCAGACCAGTGACCTATGATGCAACTTACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS TCA 72 bp | GAGAAGCCCACAGCACAGTTCCTTTTGAAGTCAGGCTaGTTCAAGAGTTCGGCAACAGTAAACTGCAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: EKPTAQFLLKSG*FKSSATVNCKS Trigger: GCTCTTGCAGTTTACTGTTGCCGAACTCTTGAATCAGCCTGACTTCAAAAGGAACTGTGCTGTGGGCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS GCA 72 bp | CATAGTTCCTGTAAGTTGCATCATAGGTCACTGGTCTaGCATCTGCATAGTGATTCTGATATCCGGAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: HSSCKLHHRSLV*HLHSDSDIRRG Trigger: GCCCCTCCGGATATCAGAATCACTATGCAGATGGCAGACCAGTGACCTATGATGCAACTTACAGGAACTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS CCA 72 bp | AAATCTGTGAAGACGCTGTCTCCTCATTTCTTCTGGTaGGAGCCGGAACCCATATGGCATTGGACCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: KSVKTLSPHFFW*EPEPIWHWTIS Trigger: AGAAATGGTCCAATGCCATATGGGTTCCGGCTCCCACCAGAAGAAATGAGGAGACAGCGTCTTCACAGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS CCA 72 bp | ATCAAATCTGTGAAGACGCTGTCTCCTCATTTCTTCTaGTGGGAGCCGGAACCCATATGGCATTGGACCATT | + |
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Preference number: 6 (lower is better) Translates to: IKSVKTLSPHFF*WEPEPIWHWTI Trigger: AATGGTCCAATGCCATATGGGTTCCGGCTCCCACCAGAAGAAATGAGGAGACAGCGTCTTCACAGATTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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| CDS CCA 72 bp | GACATCATAGTTCCTGTAAGTTGCATCATAGGTCACTaGTCTGCCATCTGCATAGTGATTCTGATATCCGGA | + |
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Preference number: 6 (lower is better) Translates to: DIIVPVSCIIGH*SAICIVILISG Trigger: TCCGGATATCAGAATCACTATGCAGATGGCAGACCAGTGACCTATGATGCAACTTACAGGAACTATGATGTC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027322.14 ENSMUST00000140020.2 |
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