Pregenerated sensors for RHAG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023926Ensembl transcript IDs: ENSMUST00000024721.8, ENSMUST00000233619.2, ENSMUST00000233740.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCATGGAATAATAGTAAAACTAAACACATTTGTACACTGGCCATTTaGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATACC | + |
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Preference number: 1 (lower is better) Translates to: AWNNSKTKHICTLAI*GWNLSIVMPISLDT Trigger: GGTATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCAAATGGCCAGTGTACAAATGTGTTTAGTTTTACTATTATTCCATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| 3UTR TCA 90 bp | TCATCTCTTTTGCAAGATATCAATGATACAATCAAACATTCTCGATaGAGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGAC | + |
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Preference number: 1 (lower is better) Translates to: SSLLQDINDTIKHSR*SYPFATSFLEPGID Trigger: GTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAATGTTTGATTGTATCATTGATATCTTGCAAAAGAGATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| 3UTR CCA 90 bp | TTTGGACAGCATGGAATAATAGTAAAACTAAACACATTTGTACACTaGCCATTTGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTT | + |
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Preference number: 1 (lower is better) Translates to: FGQHGIIVKLNTFVH*PFGAGIYLLSCLSL Trigger: AAGAGATAGGCATGACAATAGATAAATTCCAGCCCCAAATGGCCAGTGTACAAATGTGTTTAGTTTTACTATTATTCCATGCTGTCCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGACGGCACGTGGTTGTGATTTaGATGTTGAAAGAAGCGATT | + |
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Preference number: 2 (lower is better) Translates to: FSMKLSICNFILRAWDRRHVVVI*MLKEAI Trigger: AATCGCTTCTTTCAACATGCAAATCACAACCACGTG...CCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233740.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGACGGTGTACACTGGCCATTTaGGGCTGGAATTTATCTATT | + |
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Preference number: 2 (lower is better) Translates to: FSMKLSICNFILRAWDRRCTLAI*GWNLSI Trigger: AATAGATAAATTCCAGCCCCAAATGGCCAGTGTACA...CCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGACGGCTTTCTGAGCTCATGCCTATCTCTTTaGATACCAAGTTTTTGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SYPFATSFLEPGIDGFLSSCLSL*IPSFCF Trigger: GAAACAAAAACTTGGTATCCAAAGAGATAGGCATGA...GCTCAGAAAGCCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| 3UTR CAA 90 bp | CACCACCCGGCTCATTTTTCTAGTATAGACTCTTTAATATGTCCTTaGACTTCAGCTTTAAACTCTTTGGAACTGAAGACATGGTATGTA | + |
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Preference number: 2 (lower is better) Translates to: HHPAHFSSIDSLICP*TSALNSLELKTWYV Trigger: TACATACCATGTCTTCAGTTCCAAAGAGTTTAAAGCTGAAGTCAAAGGACATATTAAAGAGTCTATACTAGAAAAATGAGCCGGGTGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024721.8 |
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| 3UTR CAA 90 bp | GCTCCAGTGTCAGATGCCTCAAATAATTCAGTAACAAGATATTCGTaGCCAGCAAATACAGCAATTTCCAGAATTGTCATGATCAACATT | + |
|
Preference number: 2 (lower is better) Translates to: APVSDASNNSVTRYS*PANTAISRIVMINI Trigger: AATGTTGATCATGACAATTCTGGAAATTGCTGTATTTGCTGGCAACGAATATCTTGTTACTGAATTATTTGAGGCATCTGACACTGGAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233619.2 |
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| 3UTR-3UTR TCA 90 bp | TACAATCAAACATTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCCATTTTCCTGTCAACTaGGAAATCATTTGGACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: YNQTFSMKLSICNFILRAHFPVN*EIIWTA Trigger: TGCTGTCCAAATGATTTCTCAGTTGACAGGAAAATG...GGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAATGTTTGATTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| 3UTR-3UTR CCA 90 bp | CAAACATTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATTCATGCCTATCTCTTTaGATACCAAGTTTTTGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: QTFSMKLSICNFILRAWDSCLSL*IPSFCF Trigger: GAAACAAAAACTTGGTATCCAAAGAGATAGGCATGA...ATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAATGTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| 3UTR CAA 90 bp | CTAAACACATTTGTACACTGGCCATTTGGGGCTGGAATTTATCTATaGTCATGCCTATCTCTTTGGATACCAAGTTTTTGTTTCTTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: LNTFVHWPFGAGIYL*SCLSLWIPSFCFFK Trigger: TTTAAAGAAACAAAAACTTGGTATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCAAATGGCCAGTGTACAAATGTGTTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| 3UTR GCA 72 bp | TATAGACCAGGCTGGCCTCGCACTCAGAAATCCGCCTaGCTCTGCCTCCCAAGAGCTGGGATTAAAGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: YRPGWPRTQKSA*LCLPRAGIKGV Trigger: CACACCTTTAATCCCAGCTCTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTGCGAGGCCAGCCTGGTCTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024721.8 |
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| 3UTR-3UTR CAA 90 bp | CAGATGGAGGGAGTGGGGAATCATGAGGAACTGCAGTGGGTAGGGATGTGCAGAGCTGGAATTTATCTATaGTCATGCCTATCTCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: QMEGVGNHEELQWVGMCRAGIYL*SCLSLW Trigger: CCAAAGAGATAGGCATGACAATAGATAAATTCCAGC...TCTGCACATCCCTACCCACTGCAGTTCCTCATGATTCCCCACTCCCTCCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024721.8 |
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| 3UTR-3UTR CAA 90 bp | TTAGAGCCTGGGATAGACGGCTTTCTGAGCATTTTCCTGTCAACTGAGAAATCACCACGTGGTTGTGATTaGCATGTTGAAAGAAGCGAT | + |
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Preference number: 3 (lower is better) Translates to: LEPGIDGFLSIFLSTEKSPRGCD*HVERSD Trigger: ATCGCTTCTTTCAACATGCAAATCACAACCACGTGG...TGATTTCTCAGTTGACAGGAAAATGCTCAGAAAGCCGTCTATCCCAGGCTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233740.2 |
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| 3UTR CCA 72 bp | ATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCTaGGATAGACGGCTTTCTGAGCATTTTCCTGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: MKLSICNFILRA*DRRLSEHFPVN Trigger: GTTGACAGGAAAATGCTCAGAAAGCCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| 3UTR TCA 72 bp | TGGGATAGACGGCTTTCTGAGCATTTTCCTGTCAACTaGGAAATCATTTGGACAGCATGGAATAATAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: WDRRLSEHFPVN*EIIWTAWNNSK Trigger: TTTACTATTATTCCATGCTGTCCAAATGATTTCTCAGTTGACAGGAAAATGCTCAGAAAGCCGTCTATCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| 3UTR-3UTR CAA 90 bp | TACAATCAAACATTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCGTCATGCCTATCTCTTaGGATACCAAGTTTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: YNQTFSMKLSICNFILRAVMPIS*DTKFLF Trigger: AAACAAAAACTTGGTATCCAAAGAGATAGGCATGAC...GGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAATGTTTGATTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| 3UTR TCA 72 bp | TTGCAAGATATCAATGATACAATCAAACATTCTCGATaGAGCTATCCATTTGCAACTTCATTCTTAGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LQDINDTIKHSR*SYPFATSFLEP Trigger: AGGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAATGTTTGATTGTATCATTGATATCTTGCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR CCA 90 bp | GTTTTCCCCAGGACAGCGCCAAAGGAAATGAGAACTGTGGCTGTGCTGAAGTCTTGCTGGGAAGCATTCTaGTGGGAAGCATTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VFPRTAPKEMRTVAVLKSCWEAF*WEAFFW Trigger: CCAGAAGAATGCTTCCCACCAGAATGCTTCCCAGCA...AGACTTCAGCACAGCCACAGTTCTCATTTCCTTTGGCGCTGTCCTGGGGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233619.2 |
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| CDS-3UTR GCA 90 bp | AGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGACGGCTTTCTGAGCCCATGTCTGCACATGTaGCCACAGCAACACCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SYPFATSFLEPGIDGFLSPCLHM*PQQHLL Trigger: CAGGAGGTGTTGCTGTGGGCACATGTGCAGACATGG...GCTCAGAAAGCCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR CCA 90 bp | AGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGACGGCTTTCTGAGCACATCCCCCAGCTTATaGCCACAATGCTGGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SYPFATSFLEPGIDGFLSTSPSL*PQCWQG Trigger: GCCTTGCCAGCATTGTGGCCATAAGCTGGGGGATGT...GCTCAGAAAGCCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR CCA 90 bp | AGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGACGGCTTTCTGAGCGAGGTGTTACCCTGCTaGGAAGCATTCTGGTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SYPFATSFLEPGIDGFLSEVLPC*EAFWWE Trigger: TTCCCACCAGAATGCTTCCCAGCAGGGTAACACCTC...GCTCAGAAAGCCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR CCA 90 bp | TTAGAGCCTGGGATAGACGGCTTTCTGAGCATTTTCCTGTCAACTGAGAAATCAACATCCCCCAGCTTATaGCCACAATGCTGGCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LEPGIDGFLSIFLSTEKSTSPSL*PQCWQG Trigger: GCCTTGCCAGCATTGTGGCCATAAGCTGGGGGATGT...TGATTTCTCAGTTGACAGGAAAATGCTCAGAAAGCCGTCTATCCCAGGCTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR CCA 90 bp | CAGATGGAGGGAGTGGGGAATCATGAGGAACTGCAGTGGGTAGGGATGTGCAGAGCAAACAAGTCAGAGTaGTACACAGATTCATCATTT | + |
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Preference number: 4 (lower is better) Translates to: QMEGVGNHEELQWVGMCRANKSE*YTDSSF Trigger: AAATGATGAATCTGTGTACCACTCTGACTTGTTTGC...TCTGCACATCCCTACCCACTGCAGTTCCTCATGATTCCCCACTCCCTCCATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024721.8 |
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| CDS-3UTR TCA 90 bp | CACTGGCCATTTGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATATCCTTTCCGTGGCTGTaGAGAAGGCCCTGCATAATC | + |
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Preference number: 4 (lower is better) Translates to: HWPFGAGIYLLSCLSLWISFPWL*RRPCII Trigger: GATTATGCAGGGCCTTCTTCACAGCCACGGAAAGGA...TATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCAAATGGCCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR GCA 90 bp | TACACTGGCCATTTGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGACTTGAGGTGTTACCCTaGTGGGAAGCATTCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: YTGHLGLEFIYCHAYLFGLEVLP*WEAFWW Trigger: CCACCAGAATGCTTCCCAGCAGGGTAACACCTCAAG...TCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCAAATGGCCAGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR GCA 90 bp | TTAGAGCCTGGGATAGACGGCTTTCTGAGCATTTTCCTGTCAACTGAGAAATCAAATGGAAGATCCCAGTaGTGCTGCCTGCATAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LEPGIDGFLSIFLSTEKSNGRSQ*CCLHSH Trigger: ATGGCTATGCAGGCAGCAGCACTGGGATCTTCCATT...TGATTTCTCAGTTGACAGGAAAATGCTCAGAAAGCCGTCTATCCCAGGCTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR CCA 90 bp | AGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGACGGCTTTCTGAGCTGGGAAGCATTCTTCTaGGAAGCATTCTGTGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: SYPFATSFLEPGIDGFLSWEAFF*EAFCGV Trigger: GACACCACAGAATGCTTCCCAGAAGAATGCTTCCCA...GCTCAGAAAGCCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR CCA 90 bp | TACACTGGCCATTTGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGAGAGGTGTTACCCTGCTaGGAAGCATTCTGGTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: YTGHLGLEFIYCHAYLFGEVLPC*EAFWWE Trigger: TTCCCACCAGAATGCTTCCCAGCAGGGTAACACCTC...TCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCAAATGGCCAGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR GCA 90 bp | TCTTTAAATTTGACTCTTCTTGGCAATTCCGAGGATGCAGAGTTTAGGATCAGCCTTGAGGTGTTACCCTaGTGGGAAGCATTCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SLNLTLLGNSEDAEFRISLEVLP*WEAFWW Trigger: CCACCAGAATGCTTCCCAGCAGGGTAACACCTCAAG...GCTGATCCTAAACTCTGCATCCTCGGAATTGCCAAGAAGAGTCAAATTTAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR GCA 90 bp | TGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATACCAAGTTTTTGCCATGTCTGCACATGTaGCCACAGCAACACCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: WGWNLSIVMPISLDTKFLPCLHM*PQQHLL Trigger: CAGGAGGTGTTGCTGTGGGCACATGTGCAGACATGG...CAAAAACTTGGTATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR GCA 90 bp | CACTGGCCATTTGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATAAATGGAAGATCCCAGTaGTGCTGCCTGCATAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: HWPFGAGIYLLSCLSLWINGRSQ*CCLHSH Trigger: ATGGCTATGCAGGCAGCAGCACTGGGATCTTCCATT...TATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCAAATGGCCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR CCA 90 bp | TTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGACGGTTATGGCCACAATGCTaGCAAGGCCTCCAAAAACTC | + |
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Preference number: 4 (lower is better) Translates to: FSMKLSICNFILRAWDRRLWPQC*QGLQKL Trigger: GAGTTTTTGGAGGCCTTGCCAGCATTGTGGCCATAA...CCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR CCA 90 bp | TTAGAGCCTGGGATAGACGGCTTTCTGAGCATTTTCCTGTCAACTGAGAAATCAGCAGTATTCATCAGGTaGCTGGTTCCAGATAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LEPGIDGFLSIFLSTEKSAVFIR*LVPDRQ Trigger: TTGCCTATCTGGAACCAGCCACCTGATGAATACTGC...TGATTTCTCAGTTGACAGGAAAATGCTCAGAAAGCCGTCTATCCCAGGCTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024721.8 |
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| CDS-3UTR TCA 90 bp | AGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGACGGCTTTCTGAGCGAACTGTGGCTGTGCTaGAGTCTGCATTTATCATAT | + |
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Preference number: 4 (lower is better) Translates to: SYPFATSFLEPGIDGFLSELWLC*SLHLSY Trigger: ATATGATAAATGCAGACTTCAGCACAGCCACAGTTC...GCTCAGAAAGCCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR TCA 90 bp | TTAGAGCCTGGGATAGACGGCTTTCTGAGCATTTTCCTGTCAACTGAGAAATCAGTCATGATCAACATTTaGATGGGGCTTGTTTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LEPGIDGFLSIFLSTEKSVMINI*MGLVFP Trigger: GGGGAAAACAAGCCCCATTCAAATGTTGATCATGAC...TGATTTCTCAGTTGACAGGAAAATGCTCAGAAAGCCGTCTATCCCAGGCTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR TCA 90 bp | TTAGAGCCTGGGATAGACGGCTTTCTGAGCATTTTCCTGTCAACTGAGAAATCAGGGACATGTATGTGTTaGCAATGGCCCTATACTGAT | + |
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Preference number: 4 (lower is better) Translates to: LEPGIDGFLSIFLSTEKSGTCMC*QWPYTD Trigger: ATCAGTATAGGGCCATTGTCAACACATACATGTCCC...TGATTTCTCAGTTGACAGGAAAATGCTCAGAAAGCCGTCTATCCCAGGCTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR GCA 90 bp | TACAGCAATTTCCAGAATTGTCATGATCAACATTTGAATGGGGCTTGTTTTCCCCTTGAGGTGTTACCCTaGTGGGAAGCATTCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: YSNFQNCHDQHLNGACFPLEVLP*WEAFWW Trigger: CCACCAGAATGCTTCCCAGCAGGGTAACACCTCAAG...GGGAAAACAAGCCCCATTCAAATGTTGATCATGACAATTCTGGAAATTGCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233619.2 |
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| CDS-3UTR CCA 90 bp | TACACTGGCCATTTGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATGGGAAGCATTCTTCTaGGAAGCATTCTGTGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: YTGHLGLEFIYCHAYLFGWEAFF*EAFCGV Trigger: GACACCACAGAATGCTTCCCAGAAGAATGCTTCCCA...TCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCAAATGGCCAGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR CCA 90 bp | TCTTTAAATTTGACTCTTCTTGGCAATTCCGAGGATGCAGAGTTTAGGATCAGCTGCTGGGAAGCATTCTaGTGGGAAGCATTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SLNLTLLGNSEDAEFRISCWEAF*WEAFFW Trigger: CCAGAAGAATGCTTCCCACCAGAATGCTTCCCAGCA...GCTGATCCTAAACTCTGCATCCTCGGAATTGCCAAGAAGAGTCAAATTTAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR CCA 90 bp | AGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGACGGCTTTCTGAGCCACAGATTCATCATTTaGGTGTTCACATCTGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SYPFATSFLEPGIDGFLSHRFII*VFTSES Trigger: GGACTCAGATGTGAACACCCAAATGATGAATCTGTG...GCTCAGAAAGCCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR CCA 90 bp | TACACTGGCCATTTGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATTATGGCCACAATGCTaGCAAGGCCTCCAAAAACTC | + |
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Preference number: 4 (lower is better) Translates to: YTGHLGLEFIYCHAYLFGLWPQC*QGLQKL Trigger: GAGTTTTTGGAGGCCTTGCCAGCATTGTGGCCATAA...TCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCAAATGGCCAGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR TCA 90 bp | CACTGGCCATTTGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATAAGGATCAGCAATGGCTaGATTAAAGCTGGGCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: HWPFGAGIYLLSCLSLWIRISNG*IKAGPK Trigger: TTTTGGCCCAGCTTTAATTCAGCCATTGCTGATCCT...TATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCAAATGGCCAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR TCA 90 bp | TACACTGGCCATTTGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGAAGGATCAGCAATGGCTaGATTAAAGCTGGGCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: YTGHLGLEFIYCHAYLFGRISNG*IKAGPK Trigger: TTTTGGCCCAGCTTTAATTCAGCCATTGCTGATCCT...TCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCAAATGGCCAGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS-3UTR GCA 90 bp | TACAATCAAACATTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCGGGGATTTCCATGTCTaGACATGTGCCCACAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YNQTFSMKLSICNFILRAGDFHV*TCAHSN Trigger: GTTGCTGTGGGCACATGTGCAGACATGGAAATCCCC...GGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAATGTTTGATTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGACGGCACAGATTCATCATTTaGGTGTTCACATCTGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSMKLSICNFILRAWDRRHRFII*VFTSES Trigger: GGACTCAGATGTGAACACCCAAATGATGAATCTGTG...CCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGACGGTTTCCAGAATTGTCATaGTCAACATTTGAATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSMKLSICNFILRAWDRRFPELS*STFEWG Trigger: GCCCCATTCAAATGTTGATCATGACAATTCTGGAAA...CCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR TCA 90 bp | CAAACATTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATGGGACATGTATGTGTTaGCAATGGCCCTATACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QTFSMKLSICNFILRAWDGTCMC*QWPYTD Trigger: ATCAGTATAGGGCCATTGTCAACACATACATGTCCC...ATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAATGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTAAATTTGACTCTTCTTGGCAATTCCGAGGATGCAGAGTTTAGGATCAGCAAGCCATGCAAGTTATaGACCCCACATGTATCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLNLTLLGNSEDAEFRISKPCKL*TPHVSW Trigger: CCATGATACATGTGGGGTTCATAACTTGCATGGCTT...GCTGATCCTAAACTCTGCATCCTCGGAATTGCCAAGAAGAGTCAAATTTAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR TCA 90 bp | CAAACATTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAAGCCATGCAAGTTATaGACCCCACATGTATCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QTFSMKLSICNFILRAWDKPCKL*TPHVSW Trigger: CCATGATACATGTGGGGTTCATAACTTGCATGGCTT...ATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAATGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR GCA 90 bp | TTAGAGCCTGGGATAGACGGCTTTCTGAGCATTTTCCTGTCAACTGAGAAATCACACGTGGTTGTGATTTaGATGTTGAAAGAAGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: LEPGIDGFLSIFLSTEKSHVVVI*MLKEAI Trigger: AATCGCTTCTTTCAACATGCAAATCACAACCACGTG...TGATTTCTCAGTTGACAGGAAAATGCTCAGAAAGCCGTCTATCCCAGGCTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024721.8 |
||
| CDS-3UTR CCA 90 bp | ATATTCGTTGCCAGCAAATACAGCAATTTCCAGAATTGTCATGATCAACATTTGGAGGTGTTACCCTGCTaGGAAGCATTCTGGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IFVASKYSNFQNCHDQHLEVLPC*EAFWWE Trigger: TTCCCACCAGAATGCTTCCCAGCAGGGTAACACCTC...CAAATGTTGATCATGACAATTCTGGAAATTGCTGTATTTGCTGGCAACGAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233619.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATACCAAGTTTTTGTCTTCAGAAAGGTCATaGGGAAGCCAAACCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: WGWNLSIVMPISLDTKFLSSERS*GSQTQQ Trigger: TTGTTGGGTTTGGCTTCCTCATGACCTTTCTGAAGA...CAAAAACTTGGTATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR TCA 90 bp | CAAACATTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATGAACTGTGGCTGTGCTaGAGTCTGCATTTATCATAT | + |
|
Preference number: 4 (lower is better) Translates to: QTFSMKLSICNFILRAWDELWLC*SLHLSY Trigger: ATATGATAAATGCAGACTTCAGCACAGCCACAGTTC...ATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAATGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATACCAAGTTTTTGGTCATGATCAACATTTaGATGGGGCTTGTTTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WGWNLSIVMPISLDTKFLVMINI*MGLVFP Trigger: GGGGAAAACAAGCCCCATTCAAATGTTGATCATGAC...CAAAAACTTGGTATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR TCA 90 bp | CACTGGCCATTTGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATAGATTATCAAGTTCTCTaGATTTGGGAACCTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HWPFGAGIYLLSCLSLWIDYQVL*IWEPSK Trigger: CTTGGAAGGTTCCCAAATTCAGAGAACTTGATAATC...TATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCAAATGGCCAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024721.8 |
||
| CDS-3UTR CCA 90 bp | AGTAACAAGATATTCGTTGCCAGCAAATACAGCAATTTCCAGAATTGTCATGATTGGGAAGCATTCTTCTaGGAAGCATTCTGTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SNKIFVASKYSNFQNCHDWEAFF*EAFCGV Trigger: GACACCACAGAATGCTTCCCAGAAGAATGCTTCCCA...ATCATGACAATTCTGGAAATTGCTGTATTTGCTGGCAACGAATATCTTGTTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233619.2 |
||
| CDS-3UTR TCA 90 bp | CAAACATTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATACCCAACAAATATCATaGCATGCACATCTTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: QTFSMKLSICNFILRAWDTQQIS*HAHLGI Trigger: TATTCCAAGATGTGCATGTCATGATATTTGTTGGGT...ATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAATGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATACCAAGTTTTTGTTTCTCTTCAGAAAGGTCATaGGGAAGCCAAACCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: AGIYLLSCLSLWIPSFCFSSERS*GSQTQQ Trigger: TTGTTGGGTTTGGCTTCCTCATGACCTTTCTGAAGA...GAAACAAAAACTTGGTATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATACCAAGTTTTTGTTTCCAGAATTGTCATaGTCAACATTTGAATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WGWNLSIVMPISLDTKFLFPELS*STFEWG Trigger: GCCCCATTCAAATGTTGATCATGACAATTCTGGAAA...CAAAAACTTGGTATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR GCA 90 bp | TCTTTAAATTTGACTCTTCTTGGCAATTCCGAGGATGCAGAGTTTAGGATCAGCGGCTGTGCTGAAGTCTaGATTTATCATATTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLNLTLLGNSEDAEFRISGCAEV*IYHIVD Trigger: ATCTACAATATGATAAATGCAGACTTCAGCACAGCC...GCTGATCCTAAACTCTGCATCCTCGGAATTGCCAAGAAGAGTCAAATTTAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| 3UTR CAA 72 bp | TTTGTACACTGGCCATTTGGGGCTGGAATTTATCTATaGTCATGCCTATCTCTTTGGATACCAAGTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FVHWPFGAGIYL*SCLSLWIPSFC Trigger: ACAAAAACTTGGTATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCAAATGGCCAGTGTACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR GCA 90 bp | ATGCAGAGTTTAGGATCAGCTTTTAGACTTCATGTTCCACGTGGTTGTGATTTGACAAATATCATGACATaGACATCTTGGAATAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MQSLGSAFRLHVPRGCDLTNIMT*TSWNKG Trigger: TCCCTTATTCCAAGATGTGCATGTCATGATATTTGT...CAAATCACAACCACGTGGAACATGAAGTCTAAAAGCTGATCCTAAACTCTGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233740.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATACCAAGTTTTTGGCAAACAAGTCAGAGTaGTACACAGATTCATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: WGWNLSIVMPISLDTKFLANKSE*YTDSSF Trigger: AAATGATGAATCTGTGTACCACTCTGACTTGTTTGC...CAAAAACTTGGTATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATACCAAGTTTTTGTTTCACCCAACAAATATCATaGCATGCACATCTTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: AGIYLLSCLSLWIPSFCFTQQIS*HAHLGI Trigger: TATTCCAAGATGTGCATGTCATGATATTTGTTGGGT...GAAACAAAAACTTGGTATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR GCA 90 bp | TACAATCAAACATTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCACAAATATCATGACATaGACATCTTGGAATAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YNQTFSMKLSICNFILRATNIMT*TSWNKG Trigger: TCCCTTATTCCAAGATGTGCATGTCATGATATTTGT...GGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAATGTTTGATTGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATACCAAGTTTTTGTTTCGGCTGTGCTGAAGTCTaGATTTATCATATTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGIYLLSCLSLWIPSFCFGCAEV*IYHIVD Trigger: ATCTACAATATGATAAATGCAGACTTCAGCACAGCC...GAAACAAAAACTTGGTATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| 3UTR CAA 72 bp | TCAGATGCCTCAAATAATTCAGTAACAAGATATTCGTaGCCAGCAAATACAGCAATTTCCAGAATTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SDASNNSVTRYS*PANTAISRIVM Trigger: CATGACAATTCTGGAAATTGCTGTATTTGCTGGCAACGAATATCTTGTTACTGAATTATTTGAGGCATCTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233619.2 |
||
| CDS GCA 90 bp | CCTCCAACAATCGCTGAGCCAATGGAAGATCCCAGTGCTGCTGCCTaGATAGCCATAGACGCAGTAGACATCCCCCAGCTTATGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PPTIAEPMEDPSAAA*IAIDAVDIPQLMAT Trigger: TGTGGCCATAAGCTGGGGGATGTCTACTGCGTCTATGGCTATGCAGGCAGCAGCACTGGGATCTTCCATTGGCTCAGCGATTGTTGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS TCA 90 bp | TCTGCACATGTGCCCACAGCAACACCTCCTGCTAGAGTAGCATTCTaGATGTGTACCATATCCAGCCTGCCTCGGCGCTCTACAAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAHVPTATPPARVAF*MCTISSLPRRSTRL Trigger: CAGCCTTGTAGAGCGCCGAGGCAGGCTGGATATGGTACACATTCAGAATGCTACTCTAGCAGGAGGTGTTGCTGTGGGCACATGTGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGACGGCATAATCGTACCCCATaGGAGGCCCAGAGCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FSMKLSICNFILRAWDRRHNRTP*EAQSSK Trigger: CTTGCTGCTCTGGGCCTCCAATGGGGTACGATTATG...CCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR CAA 90 bp | TTAGAGCCTGGGATAGACGGCTTTCTGAGCATTTTCCTGTCAACTGAGAAATCACATAATCGTACCCCATaGGAGGCCCAGAGCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LEPGIDGFLSIFLSTEKSHNRTP*EAQSSK Trigger: CTTGCTGCTCTGGGCCTCCAATGGGGTACGATTATG...TGATTTCTCAGTTGACAGGAAAATGCTCAGAAAGCCGTCTATCCCAGGCTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS TCA 90 bp | ACAAGTCAGAGTGGTACACAGATTCATCATTTGGGTGTTCACATCTaGGTCCAGGCCGATATAACACACCTGCCACTGCTAAGCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TSQSGTQIHHLGVHI*VQADITHLPLLSQS Trigger: ACTTTGGCTTAGCAGTGGCAGGTGTGTTATATCGGCCTGGACTCAGATGTGAACACCCAAATGATGAATCTGTGTACCACTCTGACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR CAA 90 bp | AGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGACGGCTTTCTGAGCGCAGCAAGAAAGAGGTaGAAACCCACACCACTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SYPFATSFLEPGIDGFLSAARKR*KPTPLK Trigger: TTTCAGTGGTGTGGGTTTCAACCTCTTTCTTGCTGC...GCTCAGAAAGCCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR CAA 90 bp | AGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGACGGCTTTCTGAGCCTCCAAAGGCATGGATaGTCATTGATGCTCCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SYPFATSFLEPGIDGFLSLQRHG*SLMLQC Trigger: ACACTGGAGCATCAATGACAATCCATGCCTTTGGAG...GCTCAGAAAGCCGTCTATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS GCA 90 bp | CAGGACAGCGCCAAAGGAAATGAGAACTGTGGCTGTGCTGAAGTCTaGATTTATCATATTGTAGATTCCGAAGTGAAATTCCTTTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: QDSAKGNENCGCAEV*IYHIVDSEVKFLSV Trigger: CACGGAAAGGAATTTCACTTCGGAATCTACAATATGATAAATGCAGACTTCAGCACAGCCACAGTTCTCATTTCCTTTGGCGCTGTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS CCA 90 bp | AATATCCACAGGAAAAGTGTTCCGATCATGGCAAACAAGTCAGAGTaGTACACAGATTCATCATTTGGGTGTTCACATCTGAGTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NIHRKSVPIMANKSE*YTDSSFGCSHLSPG Trigger: GCCTGGACTCAGATGTGAACACCCAAATGATGAATCTGTGTACCACTCTGACTTGTTTGCCATGATCGGAACACTTTTCCTGTGGATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR CAA 90 bp | TACACTGGCCATTTGGGGCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGAAGGCATGGATTGTCATaGATGCTCCAGTGTCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: YTGHLGLEFIYCHAYLFGRHGLS*MLQCQM Trigger: CATCTGACACTGGAGCATCAATGACAATCCATGCCT...TCCAAAGAGATAGGCATGACAATAGATAAATTCCAGCCCCAAATGGCCAGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS TCA 90 bp | ATGCTGGCAAGGCCTCCAAAAACTCCAGGTAAGCCATGCAAGTTATaGACCCCACATGTATCATGGATCATCAGTTTATTAGCTAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: MLARPPKTPGKPCKL*TPHVSWIISLLANS Trigger: ACTGTTAGCTAATAAACTGATGATCCATGATACATGTGGGGTTCATAACTTGCATGGCTTACCTGGAGTTTTTGGAGGCCTTGCCAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR CAA 90 bp | TCTTTAAATTTGACTCTTCTTGGCAATTCCGAGGATGCAGAGTTTAGGATCAGCCTCCAAAGGCATGGATaGTCATTGATGCTCCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLNLTLLGNSEDAEFRISLQRHG*SLMLQC Trigger: ACACTGGAGCATCAATGACAATCCATGCCTTTGGAG...GCTGATCCTAAACTCTGCATCCTCGGAATTGCCAAGAAGAGTCAAATTTAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR CAA 90 bp | TACAATCAAACATTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCGCAGCAAGAAAGAGGTaGAAACCCACACCACTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: YNQTFSMKLSICNFILRAAARKR*KPTPLK Trigger: TTTCAGTGGTGTGGGTTTCAACCTCTTTCTTGCTGC...GGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAATGTTTGATTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR CAA 90 bp | CAAACATTCTCGATGAAGCTATCCATTTGCAACTTCATTCTTAGAGCCTGGGATAGTGGACTAAAGAACTaGTATCCAAGCACAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QTFSMKLSICNFILRAWDSGLKN*YPSTEM Trigger: CATCTCTGTGCTTGGATACAAGTTCTTTAGTCCACT...ATCCCAGGCTCTAAGAATGAAGTTGCAAATGGATAGCTTCATCGAGAATGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR CAA 90 bp | TCTTTAAATTTGACTCTTCTTGGCAATTCCGAGGATGCAGAGTTTAGGATCAGCTCAAGTTCTCTGAATTaGGGAACCTGTAAGCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: SLNLTLLGNSEDAEFRISSSSLN*GTCKQT Trigger: GGTTTGCTTACAGGTTCCCAAATTCAGAGAACTTGA...GCTGATCCTAAACTCTGCATCCTCGGAATTGCCAAGAAGAGTCAAATTTAAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233740.2 |
||
| CDS TCA 90 bp | CGTGGTTGTGATTTGCATGTTGAAAGAAGCGATTATCAAGTTCTCTaGATTTGGGAACCTTCCAAGAAACAGAGTCATCATAGCAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: RGCDLHVERSDYQVL*IWEPSKKQSHHSSI Trigger: AATACTGCTATGATGACTCTGTTTCTTGGAAGGTTCCCAAATTCAGAGAACTTGATAATCGCTTCTTTCAACATGCAAATCACAACCACG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024721.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATACCAAGTTTTTGTTTCAGTGGACTAAAGAACTaGTATCCAAGCACAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: AGIYLLSCLSLWIPSFCFSGLKN*YPSTEM Trigger: CATCTCTGTGCTTGGATACAAGTTCTTTAGTCCACT...GAAACAAAAACTTGGTATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGAATTTATCTATTGTCATGCCTATCTCTTTGGATACCAAGTTTTTGTTTCTCAAGTTCTCTGAATTaGGGAACCTTCCAAGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: AGIYLLSCLSLWIPSFCFSSSLN*GTFQET Trigger: TGTTTCTTGGAAGGTTCCCAAATTCAGAGAACTTGA...GAAACAAAAACTTGGTATCCAAAGAGATAGGCATGACAATAGATAAATTCCAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024721.8 |
||
| CDS GCA 72 bp | ATCGCTGAGCCAATGGAAGATCCCAGTGCTGCTGCCTaGATAGCCATAGACGCAGTAGACATCCCCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: IAEPMEDPSAAA*IAIDAVDIPQL Trigger: AAGCTGGGGGATGTCTACTGCGTCTATGGCTATGCAGGCAGCAGCACTGGGATCTTCCATTGGCTCAGCGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
||
| CDS CAA 72 bp | GTGGCTGTGAAGAAGGCCCTGCATAATCGTACCCCATaGGAGGCCCAGAGCAGCAAGAAAGAGGTTGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: VAVKKALHNRTP*EAQSSKKEVET Trigger: GGTTTCAACCTCTTTCTTGCTGCTCTGGGCCTCCAATGGGGTACGATTATGCAGGGCCTTCTTCACAGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS CAA 90 bp | TTCCTTTCCGTGGCTGTGAAGAAGGCCCTGCATAATCGTACCCCATaGGAGGCCCAGAGCAGCAAGAAAGAGGTTGAAACCCACACCACT | + |
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Preference number: 6 (lower is better) Translates to: FLSVAVKKALHNRTP*EAQSSKKEVETHTT Trigger: AGTGGTGTGGGTTTCAACCTCTTTCTTGCTGCTCTGGGCCTCCAATGGGGTACGATTATGCAGGGCCTTCTTCACAGCCACGGAAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS CCA 72 bp | GAACTTGAGGTGTTACCCTGCTGGGAAGCATTCTGGTaGGAAGCATTCTTCTGGGAAGCATTCTGTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: ELEVLPCWEAFW*EAFFWEAFCGV Trigger: GACACCACAGAATGCTTCCCAGAAGAATGCTTCCCACCAGAATGCTTCCCAGCAGGGTAACACCTCAAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024721.8 ENSMUST00000233619.2 ENSMUST00000233740.2 |
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| CDS CCA 72 bp | GCTGAACTTGAGGTGTTACCCTGCTGGGAAGCATTCTaGTGGGAAGCATTCTTCTGGGAAGCATTCTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: AELEVLPCWEAF*WEAFFWEAFCG Trigger: ACCACAGAATGCTTCCCAGAAGAATGCTTCCCACCAGAATGCTTCCCAGCAGGGTAACACCTCAAGTTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024721.8 ENSMUST00000233619.2 ENSMUST00000233740.2 |
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| CDS GCA 72 bp | AAGGCTGGACAAGGCATAGGCTGTGATCACACAGGCTaGAAGGGACATGTATGTGTTGACAATGGCCCTATA | + |
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Preference number: 6 (lower is better) Translates to: KAGQGIGCDHTG*KGHVCVDNGPI Trigger: TATAGGGCCATTGTCAACACATACATGTCCCTTGCAGCCTGTGTGATCACAGCCTATGCCTTGTCCAGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS CAA 72 bp | GTACCCCATTGGAGGCCCAGAGCAGCAAGAAAGAGGTaGAAACCCACACCACTGAAACCATATTTCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: VPHWRPRAARKR*KPTPLKPYFFR Trigger: TCTGAAGAAATATGGTTTCAGTGGTGTGGGTTTCAACCTCTTTCTTGCTGCTCTGGGCCTCCAATGGGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS CAA 90 bp | TGCATAATCGTACCCCATTGGAGGCCCAGAGCAGCAAGAAAGAGGTaGAAACCCACACCACTGAAACCATATTTCTTCAGAAAGGTCATG | + |
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Preference number: 6 (lower is better) Translates to: CIIVPHWRPRAARKR*KPTPLKPYFFRKVM Trigger: CATGACCTTTCTGAAGAAATATGGTTTCAGTGGTGTGGGTTTCAACCTCTTTCTTGCTGCTCTGGGCCTCCAATGGGGTACGATTATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS CCA 72 bp | CCCTGCTGGGAAGCATTCTGGTGGGAAGCATTCTTCTaGGAAGCATTCTGTGGTGTCTCATATTCAACAAAT | + |
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Preference number: 6 (lower is better) Translates to: PCWEAFWWEAFF*EAFCGVSYSTN Trigger: ATTTGTTGAATATGAGACACCACAGAATGCTTCCCAGAAGAATGCTTCCCACCAGAATGCTTCCCAGCAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024721.8 ENSMUST00000233619.2 ENSMUST00000233740.2 |
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| CDS TCA 72 bp | AGGCCTCCAAAAACTCCAGGTAAGCCATGCAAGTTATaGACCCCACATGTATCATGGATCATCAGTTTATTA | + |
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Preference number: 6 (lower is better) Translates to: RPPKTPGKPCKL*TPHVSWIISLL Trigger: TAATAAACTGATGATCCATGATACATGTGGGGTTCATAACTTGCATGGCTTACCTGGAGTTTTTGGAGGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS GCA 72 bp | GCCAAAGGAAATGAGAACTGTGGCTGTGCTGAAGTCTaGATTTATCATATTGTAGATTCCGAAGTGAAATTC | + |
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Preference number: 6 (lower is better) Translates to: AKGNENCGCAEV*IYHIVDSEVKF Trigger: GAATTTCACTTCGGAATCTACAATATGATAAATGCAGACTTCAGCACAGCCACAGTTCTCATTTCCTTTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS CAA 72 bp | ATCATCAGTTTATTAGCTAACAGTGGACTAAAGAACTaGTATCCAAGCACAGAGATGATCCCTGCAATGCTT | + |
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Preference number: 6 (lower is better) Translates to: IISLLANSGLKN*YPSTEMIPAML Trigger: AAGCATTGCAGGGATCATCTCTGTGCTTGGATACAAGTTCTTTAGTCCACTGTTAGCTAATAAACTGATGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024721.8 ENSMUST00000233740.2 |
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| CDS CAA 72 bp | TTAGACTTCATGTTCCACGTGGTTGTGATTTGCATGTaGAAAGAAGCGATTATCAAGTTCTCTGAATTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LDFMFHVVVICM*KEAIIKFSEFG Trigger: CCCAAATTCAGAGAACTTGATAATCGCTTCTTTCAACATGCAAATCACAACCACGTGGAACATGAAGTCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024721.8 |
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| CDS TCA 72 bp | GATTTGCATGTTGAAAGAAGCGATTATCAAGTTCTCTaGATTTGGGAACCTTCCAAGAAACAGAGTCATCAT | + |
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Preference number: 6 (lower is better) Translates to: DLHVERSDYQVL*IWEPSKKQSHH Trigger: ATGATGACTCTGTTTCTTGGAAGGTTCCCAAATTCAGAGAACTTGATAATCGCTTCTTTCAACATGCAAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024721.8 |
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