Pregenerated sensors for RGS9BP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056043Ensembl transcript IDs: ENSMUST00000069912.6
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCTTCCCAAAGCAGCACCATCCTGTCCCTCCCCCATCCGGGGATaGGTATGGAGCGGTCTTCTCTTGAAGCAAGTGTGCAGAGGATAC | + |
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Preference number: 1 (lower is better) Translates to: ALPKAAPSCPSPIRG*VWSGLLLKQVCRGY Trigger: GTATCCTCTGCACACTTGCTTCAAGAGAAGACCGCTCCATACTCATCCCCGGATGGGGGAGGGACAGGATGGTGCTGCTTTGGGAAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR GCA 90 bp | CACCTCAAGCTCACAAGGGCTCCACAAGGGCTCCCAAGACCCCAGTaGTACCAGTGGAGGATGCGAGGCACAGGGATATCAAATGACTTG | + |
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Preference number: 1 (lower is better) Translates to: HLKLTRAPQGLPRPQ*YQWRMRGTGISNDL Trigger: CAAGTCATTTGATATCCCTGTGCCTCGCATCCTCCACTGGTAGCACTGGGGTCTTGGGAGCCCTTGTGGAGCCCTTGTGAGCTTGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CCA 90 bp | CTCACAAGGGCTCCACAAGGGCTCCCAAGACCCCAGTGCTACCAGTaGAGGATGCGAGGCACAGGGATATCAAATGACTTGAGGTACTTG | + |
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Preference number: 1 (lower is better) Translates to: LTRAPQGLPRPQCYQ*RMRGTGISNDLRYL Trigger: CAAGTACCTCAAGTCATTTGATATCCCTGTGCCTCGCATCCTCCACTGGTAGCACTGGGGTCTTGGGAGCCCTTGTGGAGCCCTTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR GCA 90 bp | GTCCACGGCCAAGCTTCCTGTGGTAATGGCTGCGTACAACTGTACTaGAGAGGAAAGCACGCAGATACCTACAGTTTGGAACCCTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: VHGQASCGNGCVQLY*RGKHADTYSLEPSG Trigger: CCCAGAGGGTTCCAAACTGTAGGTATCTGCGTGCTTTCCTCTGCAGTACAGTTGTACGCAGCCATTACCACAGGAAGCTTGGCCGTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR GCA 90 bp | CAGGGTAGATGGTGGGCCCTCAAGGGAGAGGCACACCCCAAGGGATaGAGAAGTAAGCTCTTCCTGCAATATTTTCCTCATCAGCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: QGRWWALKGEAHPKG*RSKLFLQYFPHQLL Trigger: AAGAAGCTGATGAGGAAAATATTGCAGGAAGAGCTTACTTCTGCATCCCTTGGGGTGTGCCTCTCCCTTGAGGGCCCACCATCTACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR GCA 90 bp | ACCAAATCATCCAACAAAATAAGCCTGTCCCACTTCAGTGCCATCTaGTCGACACCTCAAGCTCACAAGGGCTCCACAAGGGCTCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: TKSSNKISLSHFSAI*STPQAHKGSTRAPK Trigger: CTTGGGAGCCCTTGTGGAGCCCTTGTGAGCTTGAGGTGTCGAGCAGATGGCACTGAAGTGGGACAGGCTTATTTTGTTGGATGATTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CCA 90 bp | CTCCAGGAAGGCAGAGAGCATTTCTCACATCTCATCCTTTACCGGTaGAAAGCAGGGGCCATTTCTGCCTTTTATGTGGAGGGTTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: LQEGREHFSHLILYR*KAGAISAFYVEGSG Trigger: GCCAGAACCCTCCACATAAAAGGCAGAAATGGCCCCTGCTTTCCACCGGTAAAGGATGAGATGTGAGAAATGCTCTCTGCCTTCCTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR GCA 90 bp | CGGATATTATGCAGACCAGGCTGCCCTCCAACTCAGAGATCCTCCTaGCTTTACCTCCAAGGATTAAAAGTGTGCACTACTATGTCCCGA | + |
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Preference number: 1 (lower is better) Translates to: RILCRPGCPPTQRSS*LYLQGLKVCTTMSR Trigger: TCGGGACATAGTAGTGCACACTTTTAATCCTTGGAGGTAAAGGCAGGAGGATCTCTGAGTTGGAGGGCAGCCTGGTCTGCATAATATCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR GCA 90 bp | CGTTTTGCCCAGGCAGAGGTGGGCTTTGAAAGGATCATGTTCATATaGACACATTCAGGCTCACTACCTCTCTCCTTAACGGTTCAAACC | + |
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Preference number: 1 (lower is better) Translates to: RFAQAEVGFERIMFI*THSGSLPLSLTVQT Trigger: GGTTTGAACCGTTAAGGAGAGAGGTAGTGAGCCTGAATGTGTGCATATGAACATGATCCTTTCAAAGCCCACCTCTGCCTGGGCAAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR TCA 90 bp | CAACTAGGGTGTCTTCTCTCTCGTAGTCCTGCAGGGAAAACTCCCTaGACCTCCCACAGAATGAGGTGGACATATATAAATGACAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: QLGCLLSRSPAGKTP*TSHRMRWTYINDRS Trigger: ACTCCTGTCATTTATATATGTCCACCTCATTCTGTGGGAGGTTCAGGGAGTTTTCCCTGCAGGACTACGAGAGAGAAGACACCCTAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CCA 90 bp | TCTCTGTCTCTCTCTCTGTCTCTGTGTAGGTCAGAGAACAACTTTTaGGAGCCTGTTCTCTCCTTCCATTTTGTGGATTTCAGGATGGAA | + |
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Preference number: 1 (lower is better) Translates to: SLSLSLSLCRSENNF*EPVLSFHFVDFRME Trigger: TTCCATCCTGAAATCCACAAAATGGAAGGAGAGAACAGGCTCCCAAAAGTTGTTCTCTGACCTACACAGAGACAGAGAGAGAGACAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR TCA 90 bp | CCATTTCTAGCCAAGCAGATCTTTGCTTTTGTCCCACCAACCATTTaGAAGTTAAATGCATCTGCTTTCTCAGTACCACTTCCCCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: PFLAKQIFAFVPPTI*KLNASAFSVPLPQA Trigger: GGCTTGGGGAAGTGGTACTGAGAAAGCAGATGCATTTAACTTTCAAATGGTTGGTGGGACAAAAGCAAAGATCTGCTTGGCTAGAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR GCA 90 bp | CCAACTCAGAGATCCTCCTGCCTTTACCTCCAAGGATTAAAAGTGTaGACTACTATGTCCCGATACAGTACATACTTCTACCTCTTAAGC | + |
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Preference number: 1 (lower is better) Translates to: PTQRSSCLYLQGLKV*TTMSRYSTYFYLLS Trigger: GCTTAAGAGGTAGAAGTATGTACTGTATCGGGACATAGTAGTGCACACTTTTAATCCTTGGAGGTAAAGGCAGGAGGATCTCTGAGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR GCA 90 bp | CAGATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACGCATaGGAGTGTTTAAAGCTCTTTAAATTCCAAATTAAAGCTGTTACA | + |
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Preference number: 1 (lower is better) Translates to: QIVCVCVCVCVCVYA*ECLKLFKFQIKAVT Trigger: TGTAACAGCTTTAATTTGGAATTTAAAGAGCTTTAAACACTCGCATGCGTACACACACACACACACACACACACACACACACACTATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CCA 90 bp | TGTAAAAGTTCTCTAAGCTTGACTCACTTGGCATCTATGAGCTTGTaGCCCAGTTTCCTTTATACAAAAACAAACATGCAACCCAACTTT | + |
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Preference number: 1 (lower is better) Translates to: CKSSLSLTHLASMSL*PSFLYTKTNMQPNF Trigger: AAAGTTGGGTTGCATGTTTGTTTTTGTATAAAGGAAACTGGGCCACAAGCTCATAGATGCCAAGTGAGTCAAGCTTAGAGAACTTTTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR TCA 90 bp | AGGGCTCCACAAGGGCTCCCAAGACCCCAGTGCTACCAGTGGAGGATGCGAGGCAAAGCTGTTACATTTTaGACTCAGCTGCCAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: RAPQGLPRPQCYQWRMRGKAVTF*TQLPGS Trigger: TGAGCCTGGCAGCTGAGTTCAAAATGTAACAGCTTT...GCCTCGCATCCTCCACTGGTAGCACTGGGGTCTTGGGAGCCCTTGTGGAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR GCA 90 bp | ACATTAGAGGTAATGGCCTGGCCGCCCTGTGCTGTTAACTCCTCTTGGGCCAGCCAAACCCGAAGCCCATaGCCTGGAAAGAAAAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: TLEVMAWPPCAVNSSWASQTRSP*PGKKRG Trigger: GCCCCTTTTCTTTCCAGGGCATGGGCTTCGGGTTTG...GCTGGCCCAAGAGGAGTTAACAGCACAGGGCGGCCAGGCCATTACCTCTAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR TCA 90 bp | ACATTAGAGGTAATGGCCTGGCCGCCCTGTGCTGTTAACTCCTCTTGGGCCAGCGGCAGAGGTGGGCTTTaGAAGGATCATGTTCATATG | + |
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Preference number: 2 (lower is better) Translates to: TLEVMAWPPCAVNSSWASGRGGL*KDHVHM Trigger: CATATGAACATGATCCTTTCAAAGCCCACCTCTGCC...GCTGGCCCAAGAGGAGTTAACAGCACAGGGCGGCCAGGCCATTACCTCTAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR GCA 90 bp | GCACGCAGATACCTACAGTTTGGAACCCTCTGGGCTCTTTTTGCATCCGAGTCTCCCCCACCACCACTATaGTTGATACAACCCCACACC | + |
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Preference number: 2 (lower is better) Translates to: ARRYLQFGTLWALFASESPPPPL*LIQPHT Trigger: GGTGTGGGGTTGTATCAAGCATAGTGGTGGTGGGGG...AGACTCGGATGCAAAAAGAGCCCAGAGGGTTCCAAACTGTAGGTATCTGCGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTTGTCTAGGGAACAAAATGTCTCCCTCCCCCACCACCACTATGCTTGATCCGAAGCCCATGCCCTaGAAAGAAAAGGGGCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: VSCLGNKMSPSPTTTMLDPKPMP*KEKGQR Trigger: CCGCTGCCCCTTTTCTTTCCAGGGCATGGGCTTCGG...ATCAAGCATAGTGGTGGTGGGGGAGGGAGACATTTTGTTCCCTAGACAAGAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 90 bp | TGCGTACAACTGTACTGCAGAGGAAAGCACGCAGATACCTACAGTTaGGAACCCTCTGGGCTCTTTTTGCATCCGAGTCTGTGGAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: CVQLYCRGKHADTYS*EPSGLFLHPSLWRV Trigger: TACTCTCCACAGACTCGGATGCAAAAAGAGCCCAGAGGGTTCCAAACTGTAGGTATCTGCGTGCTTTCCTCTGCAGTACAGTTGTACGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR GCA 90 bp | ATCCAACAAAATAAGCCTGTCCCACTTCAGTGCCATCTGCTCGACACCTCAAGCAGCAGGGGCCATTTCTaGCTTTTATGTGGAGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: IQQNKPVPLQCHLLDTSSSRGHF*LLCGGF Trigger: GAACCCTCCACATAAAAGGCAGAAATGGCCCCTGCT...GCTTGAGGTGTCGAGCAGATGGCACTGAAGTGGGACAGGCTTATTTTGTTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR CCA 90 bp | GAGGAAAGAACAGCTTACAAATGGACCAGAGTGCACATCAGGGCAAAATGCTACCCCTTCCCTGTAACATaGGGTCAGACAGTTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: EERTAYKWTRVHIRAKCYPFPVT*GQTVGQ Trigger: CTGCCCAACTGTCTGACCCCATGTTACAGGGAAGGG...GTAGCATTTTGCCCTGATGTGCACTCTGGTCCATTTGTAAGCTGTTCTTTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 90 bp | AGGAGTATCTTTCCAGAAATGTCTACCGTCCCAGTCATCAGCCTTTaGCCAGTTCTCAGGAACCAGAAGACACTGCATTTGAAGGACGGC | + |
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Preference number: 2 (lower is better) Translates to: RSIFPEMSTVPVISL*PVLRNQKTLHLKDG Trigger: GCCGTCCTTCAAATGCAGTGTCTTCTGGTTCCTGAGAACTGGCAAAAGGCTGATGACTGGGACGGTAGACATTTCTGGAAAGATACTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 90 bp | GGTCTTCTCTTGAAGCAAGTGTGCAGAGGATACACCACAACCTTCTaGGCTGTGACCCTAAATGGGGTCACGACACAAAAACCTCTCATA | + |
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Preference number: 2 (lower is better) Translates to: GLLLKQVCRGYTTTF*AVTLNGVTTQKPLI Trigger: TATGAGAGGTTTTTGTGTCGTGACCCCATTTAGGGTCACAGCCAAGAAGGTTGTGGTGTATCCTCTGCACACTTGCTTCAAGAGAAGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR GCA 90 bp | CAAGGCAGGGTAGCATATGCCTTTAATCCTAGCATTCAGGAGGCAGAGGAAGGATGCATGTTCTGCAAGTaGAATACCTACGTGTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: QGRVAYAFNPSIQEAEEGCMFCK*NTYVWC Trigger: ACACCACACGTAGGTATTGCACTTGCAGAACATGCA...TCCTTCCTCTGCCTCCTGAATGCTAGGATTAAAGGCATATGCTACCCTGCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR TCA 90 bp | GAGGAAAGAACAGCTTACAAATGGACCAGAGTGCACATCAGGGCAAAATGCTACGCTTGGTCTACAAACTaGATTCCAGGACAGCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: EERTAYKWTRVHIRAKCYAWSTN*IPGQLG Trigger: TCCTAGCTGTCCTGGAATTCAGTTTGTAGACCAAGC...GTAGCATTTTGCCCTGATGTGCACTCTGGTCCATTTGTAAGCTGTTCTTTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR GCA 90 bp | GAGGAAAGAACAGCTTACAAATGGACCAGAGTGCACATCAGGGCAAAATGCTACACAGAGAAAGCACTTTaGACGAGCCTCTATCCGTAC | + |
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Preference number: 2 (lower is better) Translates to: EERTAYKWTRVHIRAKCYTEKAL*TSLYPY Trigger: GTACGGATAGAGGCTCGTGCAAAGTGCTTTCTCTGT...GTAGCATTTTGCCCTGATGTGCACTCTGGTCCATTTGTAAGCTGTTCTTTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR GCA 90 bp | ATCCAACAAAATAAGCCTGTCCCACTTCAGTGCCATCTGCTCGACACCTCAAGCAGAACTTGCATGTTCTaGAAGTGCAATACCTACGTG | + |
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Preference number: 2 (lower is better) Translates to: IQQNKPVPLQCHLLDTSSRTCMF*KCNTYV Trigger: CACGTAGGTATTGCACTTGCAGAACATGCAAGTTCT...GCTTGAGGTGTCGAGCAGATGGCACTGAAGTGGGACAGGCTTATTTTGTTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR CCA 90 bp | AGAGAACAACTTTTGGGAGCCTGTTCTCTCCTTCCATTTTGTGGATTTCAGGATAAACTCAGAGGGACCTaGGGTCACTGTGGACCGATT | + |
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Preference number: 2 (lower is better) Translates to: REQLLGACSLLPFCGFQDKLRGT*GHCGPI Trigger: AATCGGTCCACAGTGACCCCAGGTCCCTCTGAGTTT...ATCCTGAAATCCACAAAATGGAAGGAGAGAACAGGCTCCCAAAAGTTGTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR TCA 90 bp | GAGGAAAGAACAGCTTACAAATGGACCAGAGTGCACATCAGGGCAAAATGCTACCATTTTCAATCTCAGTaGGTTTCCTGGGTTCACAGG | + |
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Preference number: 2 (lower is better) Translates to: EERTAYKWTRVHIRAKCYHFQSQ*VSWVHR Trigger: CCTGTGAACCCAGGAAACTCACTGAGATTGAAAATG...GTAGCATTTTGCCCTGATGTGCACTCTGGTCCATTTGTAAGCTGTTCTTTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR TCA 90 bp | GCACGCAGATACCTACAGTTTGGAACCCTCTGGGCTCTTTTTGCATCCGAGTCTCTCAACATCCAAGTATaGATAGAACCAGGATTCTAT | + |
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Preference number: 2 (lower is better) Translates to: ARRYLQFGTLWALFASESLNIQV*IEPGFY Trigger: ATAGAATCCTGGTTCTATTCATACTTGGATGTTGAG...AGACTCGGATGCAAAAAGAGCCCAGAGGGTTCCAAACTGTAGGTATCTGCGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR TCA 90 bp | GAAAAATTCACAATTCATAACCTCACCACCTTAACAAGTACTTTCGTTTCTGTGCACACTCCTAACCTGTaGGCCATCTCCCCAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: EKFTIHNLTTLTSTFVSVHTPNL*AISPAP Trigger: AGGGGCTGGGGAGATGGCTCACAGGTTAGGAGTGTG...CACAGAAACGAAAGTACTTGTTAAGGTGGTGAGGTTATGAATTGTGAATTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR TCA 90 bp | TATCGATGGGGTGTACACTCCAACATTCCAATGTTGGTGAAGAAAATTAAGCATGATAAAGTAAGCCGGTaGGAAGGAGAACGTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: YRWGVHSNIPMLVKKIKHDKVSR*EGERAC Trigger: ACAGGCACGTTCTCCTTCTCACCGGCTTACTTTATC...ATGCTTAATTTTCTTCACCAACATTGGAATGTTGGAGTGTACACCCCATCGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR GCA 90 bp | GAAAAATTCACAATTCATAACCTCACCACCTTAACAAGTACTTTCGTTTCTGTGGGAGTTACAGGCAGTTaGGAACTGCTGGCTGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: EKFTIHNLTTLTSTFVSVGVTGS*ELLAGS Trigger: ACTGCCAGCCAGCAGTTCGCAACTGCCTGTAACTCC...CACAGAAACGAAAGTACTTGTTAAGGTGGTGAGGTTATGAATTGTGAATTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR GCA 90 bp | ATCCAACAAAATAAGCCTGTCCCACTTCAGTGCCATCTGCTCGACACCTCAAGCAACCTTTTGCAACATTaGAATGAATTGCAGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: IQQNKPVPLQCHLLDTSSNLLQH*NELQSS Trigger: AGATGACTGCAATTCATTGCAATGTTGCAAAAGGTT...GCTTGAGGTGTCGAGCAGATGGCACTGAAGTGGGACAGGCTTATTTTGTTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR CCA 90 bp | GAAAAATTCACAATTCATAACCTCACCACCTTAACAAGTACTTTCGTTTCTGTGGTTTACATAGCCGTGTaGCCCTTCCCAAAGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: EKFTIHNLTTLTSTFVSVVYIAV*PFPKQH Trigger: GTGCTGCTTTGGGAAGGGCCACACGGCTATGTAAAC...CACAGAAACGAAAGTACTTGTTAAGGTGGTGAGGTTATGAATTGTGAATTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR GCA 90 bp | AGAGAACAACTTTTGGGAGCCTGTTCTCTCCTTCCATTTTGTGGATTTCAGGATAGGATCATGTTCATATaGACACATTCAGGCTCACTA | + |
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Preference number: 2 (lower is better) Translates to: REQLLGACSLLPFCGFQDRIMFI*THSGSL Trigger: TAGTGAGCCTGAATGTGTGCATATGAACATGATCCT...ATCCTGAAATCCACAAAATGGAAGGAGAGAACAGGCTCCCAAAAGTTGTTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR CCA 90 bp | GAAAAATTCACAATTCATAACCTCACCACCTTAACAAGTACTTTCGTTTCTGTGTTGCCCAGGCAGAGGTaGGCTTTGAAAGGATCATGT | + |
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Preference number: 2 (lower is better) Translates to: EKFTIHNLTTLTSTFVSVLPRQR*ALKGSC Trigger: ACATGATCCTTTCAAAGCCCACCTCTGCCTGGGCAA...CACAGAAACGAAAGTACTTGTTAAGGTGGTGAGGTTATGAATTGTGAATTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 90 bp | CAATGTAAAAGTTCTCTAAGCTTGACTCACTTGGCATCTATGAGCTaGTGGCCCAGTTTCCTTTATACAAAAACAAACATGCAACCCAAC | + |
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Preference number: 2 (lower is better) Translates to: QCKSSLSLTHLASMS*WPSFLYTKTNMQPN Trigger: GTTGGGTTGCATGTTTGTTTTTGTATAAAGGAAACTGGGCCACAAGCTCATAGATGCCAAGTGAGTCAAGCTTAGAGAACTTTTACATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR TCA 90 bp | GAAAAATTCACAATTCATAACCTCACCACCTTAACAAGTACTTTCGTTTCTGTGGGATATCAAATGACTTaGGGTACTTGGAGAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: EKFTIHNLTTLTSTFVSVGYQMT*GTWREA Trigger: TGCCTCTCTCCAAGTACCTCAAGTCATTTGATATCC...CACAGAAACGAAAGTACTTGTTAAGGTGGTGAGGTTATGAATTGTGAATTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR-3UTR GCA 90 bp | AGAGAACAACTTTTGGGAGCCTGTTCTCTCCTTCCATTTTGTGGATTTCAGGATAACATTGCAATGAATTaGAGTCATCTAAGAACCATC | + |
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Preference number: 2 (lower is better) Translates to: REQLLGACSLLPFCGFQDNIAMN*SHLRTI Trigger: GATGGTTCTTAGATGACTGCAATTCATTGCAATGTT...ATCCTGAAATCCACAAAATGGAAGGAGAGAACAGGCTCCCAAAAGTTGTTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 90 bp | AGCAGACTACATATACAATGTAAAAGTTCTCTAAGCTTGACTCACTaGGCATCTATGAGCTTGTGGCCCAGTTTCCTTTATACAAAAACA | + |
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Preference number: 2 (lower is better) Translates to: SRLHIQCKSSLSLTH*ASMSLWPSFLYTKT Trigger: TGTTTTTGTATAAAGGAAACTGGGCCACAAGCTCATAGATGCCAAGTGAGTCAAGCTTAGAGAACTTTTACATTGTATATGTAGTCTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 90 bp | TTCATATTTAGCAGACTACATATACAATGTAAAAGTTCTCTAAGCTaGACTCACTTGGCATCTATGAGCTTGTGGCCCAGTTTCCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: FIFSRLHIQCKSSLS*THLASMSLWPSFLY Trigger: ATAAAGGAAACTGGGCCACAAGCTCATAGATGCCAAGTGAGTCAAGCTTAGAGAACTTTTACATTGTATATGTAGTCTGCTAAATATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CCA 72 bp | GGTGAGAAGGAGAACGTGCCTGTTTACATAGCCGTGTaGCCCTTCCCAAAGCAGCACCATCCTGTCCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: GEKENVPVYIAV*PFPKQHHPVPP Trigger: GGGAGGGACAGGATGGTGCTGCTTTGGGAAGGGCCACACGGCTATGTAAACAGGCACGTTCTCCTTCTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR TCA 72 bp | AAAGCAGCACCATCCTGTCCCTCCCCCATCCGGGGATaGGTATGGAGCGGTCTTCTCTTGAAGCAAGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: KAAPSCPSPIRG*VWSGLLLKQVC Trigger: GCACACTTGCTTCAAGAGAAGACCGCTCCATACTCATCCCCGGATGGGGGAGGGACAGGATGGTGCTGCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR TCA 72 bp | GTGGCCTCTGGAAGAACAGCATGTGCCCTTAACCTCTaGGCCATCTCCCCAGCCCCCGAACAGCCTATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VASGRTACALNL*AISPAPEQPMF Trigger: AAACATAGGCTGTTCGGGGGCTGGGGAGATGGCTCAGAGGTTAAGGGCACATGCTGTTCTTCCAGAGGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR GCA 72 bp | CTACCTCTCTCCTTAACGGTTCAAACCCGAAGCCCATaGCCTGGAAAGAAAAGGGGCAGCGGACGACCGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LPLSLTVQTRSP*PGKKRGSGRPL Trigger: CAACGGTCGTCCGCTGCCCCTTTTCTTTCCAGGGCATGGGCTTCGGGTTTGAACCGTTAAGGAGAGAGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR CCA 72 bp | GCTCCACAAGGGCTCCCAAGACCCCAGTGCTACCAGTaGAGGATGCGAGGCACAGGGATATCAAATGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: APQGLPRPQCYQ*RMRGTGISNDL Trigger: CAAGTCATTTGATATCCCTGTGCCTCGCATCCTCCACTGGTAGCACTGGGGTCTTGGGAGCCCTTGTGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR CCA 72 bp | GAGGTAAAGCTCCTACAGACATTAGAGGTAATGGCCTaGCCGCCCTGTGCTGTTAACTCCTCTTGGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: EVKLLQTLEVMA*PPCAVNSSWAS Trigger: GCTGGCCCAAGAGGAGTTAACAGCACAGGGCGGCCAGGCCATTACCTCTAATGTCTGTAGGAGCTTTACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR CCA 72 bp | GCCAAGGCACGGAGGCTCATCACTTTGAGGCCAGTCTaGGCTACAAAGCAAGGCAGGGTAGCATATGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: AKARRLITLRPV*ATKQGRVAYAF Trigger: AAAGGCATATGCTACCCTGCCTTGCTTTGTAGCCCAGACTGGCCTCAAAGTGATGAGCCTCCGTGCCTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR CCA 72 bp | GAGCTGGCATTATGGGCATCTGTGAGCCACCCAGTGTaGGTGCTGAGAACTGAACTTGTGGCCTCTGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ELALWASVSHPV*VLRTELVASGR Trigger: TCTTCCAGAGGCCACAAGTTCAGTTCTCAGCACCCACACTGGGTGGCTCACAGATGCCCATAATGCCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR TCA 72 bp | GTCAGGCATGAGCGGCCCCATATGGGCGCTAAGAATTaGATCCTGGTTCTCTGTAAGAGCAGCACACACTCC | + |
|
Preference number: 3 (lower is better) Translates to: VRHERPHMGAKN*ILVLCKSSTHS Trigger: GGAGTGTGTGCTGCTCTTACAGAGAACCAGGATTCAATTCTTAGCGCCCATATGGGGCCGCTCATGCCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR CCA 72 bp | TCTCTCCTTAACGGTTCAAACCCGAAGCCCATGCCCTaGAAAGAAAAGGGGCAGCGGACGACCGTTGGATAT | + |
|
Preference number: 3 (lower is better) Translates to: SLLNGSNPKPMP*KEKGQRTTVGY Trigger: ATATCCAACGGTCGTCCGCTGCCCCTTTTCTTTCCAGGGCATGGGCTTCGGGTTTGAACCGTTAAGGAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR TCA 72 bp | CTACCAGTGGAGGATGCGAGGCACAGGGATATCAAATaGCTTGAGGTACTTGGAGAGAGGCAGGGTAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: LPVEDARHRDIK*LEVLGERQGRW Trigger: CCATCTACCCTGCCTCTCTCCAAGTACCTCAAGTCATTTGATATCCCTGTGCCTCGCATCCTCCACTGGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR GCA 72 bp | TGGTGGGCCCTCAAGGGAGAGGCACACCCCAAGGGATaGAGAAGTAAGCTCTTCCTGCAATATTTTCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: WWALKGEAHPKG*RSKLFLQYFPH Trigger: ATGAGGAAAATATTGCAGGAAGAGCTTACTTCTGCATCCCTTGGGGTGTGCCTCTCCCTTGAGGGCCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR GCA 72 bp | TCCAACAAAATAAGCCTGTCCCACTTCAGTGCCATCTaGTCGACACCTCAAGCTCACAAGGGCTCCACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SNKISLSHFSAI*STPQAHKGSTR Trigger: CCTTGTGGAGCCCTTGTGAGCTTGAGGTGTCGAGCAGATGGCACTGAAGTGGGACAGGCTTATTTTGTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR GCA 72 bp | TGTGATGTCCACGGCCAAGCTTCCTGTGGTAATGGCTaGGTACAACTGTACTGCAGAGGAAAGCACGCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CDVHGQASCGNG*VQLYCRGKHAD Trigger: ATCTGCGTGCTTTCCTCTGCAGTACAGTTGTACGCAGCCATTACCACAGGAAGCTTGGCCGTGGACATCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR-3UTR CAA 90 bp | GCACGCAGATACCTACAGTTTGGAACCCTCTGGGCTCTTTTTGCATCCGAGTCTTACACCACAACCTTCTaGGCTGTGACCCTAAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: ARRYLQFGTLWALFASESYTTTF*AVTLNG Trigger: CCCATTTAGGGTCACAGCCAAGAAGGTTGTGGTGTA...AGACTCGGATGCAAAAAGAGCCCAGAGGGTTCCAAACTGTAGGTATCTGCGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGCAGGGTAGCATATGCCTTTAATCCTAGCATTCAGGAGGCAGAGGAAGGACACAGAGAAAGCACTTaGCACGAGCCTCTATCCGTA | + |
|
Preference number: 3 (lower is better) Translates to: QGRVAYAFNPSIQEAEEGHREST*HEPLSV Trigger: TACGGATAGAGGCTCGTGCAAAGTGCTTTCTCTGTG...TCCTTCCTCTGCCTCCTGAATGCTAGGATTAAAGGCATATGCTACCCTGCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR-3UTR CAA 90 bp | GCACGCAGATACCTACAGTTTGGAACCCTCTGGGCTCTTTTTGCATCCGAGTCTACCTCTGTCTTCCCTTaGCATTGCTGCCAGTTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: ARRYLQFGTLWALFASESTSVFP*HCCQLN Trigger: ATTCAACTGGCAGCAATGCAAAGGGAAGACAGAGGT...AGACTCGGATGCAAAAAGAGCCCAGAGGGTTCCAAACTGTAGGTATCTGCGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR GCA 72 bp | TCTCATCCTTTACCGGTGGAAAGCAGGGGCCATTTCTaGCTTTTATGTGGAGGGTTCTGGCAGTTTGAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SHPLPVESRGHF*LLCGGFWQFEL Trigger: TAGCTCAAACTGCCAGAACCCTCCACATAAAAGGCAGAAATGGCCCCTGCTTTCCACCGGTAAAGGATGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR GCA 72 bp | CAAATCATCCAACAAAATAAGCCTGTCCCACTTCAGTaGCATCTGCTCGACACCTCAAGCTCACAAGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QIIQQNKPVPLQ*HLLDTSSSQGL Trigger: GAGCCCTTGTGAGCTTGAGGTGTCGAGCAGATGGCACTGAAGTGGGACAGGCTTATTTTGTTGGATGATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR CCA 72 bp | TTACATTTTGAACTCAGCTGCCAGGCTCACAACCCCTaGTTACTAGTGATACCAGCATCGCCCTTCCCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LHFELSCQAHNP*LLVIPASPFPV Trigger: TACAGGGAAGGGCGATGCTGGTATCACTAGTAACCAGGGGTTGTGAGCCTGGCAGCTGAGTTCAAAATGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR CCA 72 bp | TTTTGGTTATGTGCATGTGTGAATAGTGTGCCTCCATaGGGACAAATACCTGAGGTGTCCAGAAGAGGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: FWLCACVNSVPP*GQIPEVSRRGG Trigger: GCCCCCTCTTCTGGACACCTCAGGTATTTGTCCCCATGGAGGCACACTATTCACACATGCACATAACCAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR CCA 72 bp | GGCAGAGAGCATTTCTCACATCTCATCCTTTACCGGTaGAAAGCAGGGGCCATTTCTGCCTTTTATGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GREHFSHLILYR*KAGAISAFYVE Trigger: CTCCACATAAAAGGCAGAAATGGCCCCTGCTTTCCACCGGTAAAGGATGAGATGTGAGAAATGCTCTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR CCA 72 bp | GGCTGTGAAAACAAGATTGAATTAGTGCACTTTGCATaGCTTGGTATGCAGTGTCCCTGGAGGCCAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GCENKIELVHFA*LGMQCPWRPEE Trigger: CTCCTCTGGCCTCCAGGGACACTGCATACCAAGCCATGCAAAGTGCACTAATTCAATCTTGTTTTCACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR CCA 72 bp | AGGAAAGCACGCAGATACCTACAGTTTGGAACCCTCTaGGCTCTTTTTGCATCCGAGTCTGTGGAGAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: RKARRYLQFGTL*ALFASESVESK Trigger: CTTACTCTCCACAGACTCGGATGCAAAAAGAGCCCAGAGGGTTCCAAACTGTAGGTATCTGCGTGCTTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAAAGAACAGCTTACAAATGGACCAGAGTGCACATCAGGGCAAAATGCTACTGGAGCGGTCTTCTCTaGAAGCAAGTGTGCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: EERTAYKWTRVHIRAKCYWSGLL*KQVCRG Trigger: TCCTCTGCACACTTGCTTCAAGAGAAGACCGCTCCA...GTAGCATTTTGCCCTGATGTGCACTCTGGTCCATTTGTAAGCTGTTCTTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR TCA 72 bp | TCTCGTCTAAAACAGAATGAGTGCTACCAACCAGCGTaGGGGCACCAAACTTGGGACATACGTCTTAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: SRLKQNECYQPA*GHQTWDIRLNP Trigger: TGGGTTAAGACGTATGTCCCAAGTTTGGTGCCCTCACGCTGGTTGGTAGCACTCATTCTGTTTTAGACGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR GCA 72 bp | GCTGGCAGTGGGTGGATGAATACTGTGAACAGAACTTaGATGTTCTGCAAGTGCAATACCTACGTGTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: AGSGWMNTVNRT*MFCKCNTYVWC Trigger: ACACCACACGTAGGTATTGCACTTGCAGAACATGCAAGTTCTGTTCACAGTATTCATCCACCCACTGCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR GCA 72 bp | GCAAGGAGGAAAGAACAGCTTACAAATGGACCAGAGTaGACATCAGGGCAAAATGCTACATTACCAGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: ARRKEQLTNGPE*TSGQNATLPGT Trigger: GGTCCCTGGTAATGTAGCATTTTGCCCTGATGTGCACTCTGGTCCATTTGTAAGCTGTTCTTTCCTCCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR GCA 72 bp | CAAGCTTCCTGTGGTAATGGCTGCGTACAACTGTACTaGAGAGGAAAGCACGCAGATACCTACAGTTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QASCGNGCVQLY*RGKHADTYSLE Trigger: TTCCAAACTGTAGGTATCTGCGTGCTTTCCTCTGCAGTACAGTTGTACGCAGCCATTACCACAGGAAGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAAAGAACAGCTTACAAATGGACCAGAGTGCACATCAGGGCAAAATGCTACAAAACAAAACACGTTTaGCCCAGGCAGAGGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: EERTAYKWTRVHIRAKCYKTKHV*PRQRWA Trigger: AGCCCACCTCTGCCTGGGCAAAACGTGTTTTGTTTT...GTAGCATTTTGCCCTGATGTGCACTCTGGTCCATTTGTAAGCTGTTCTTTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR-3UTR CAA 90 bp | GCACGCAGATACCTACAGTTTGGAACCCTCTGGGCTCTTTTTGCATCCGAGTCTTGTCCCACCAACCATTaGAAAGTTAAATGCATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ARRYLQFGTLWALFASESCPTNH*KVKCIC Trigger: GCAGATGCATTTAACTTTCAAATGGTTGGTGGGACA...AGACTCGGATGCAAAAAGAGCCCAGAGGGTTCCAAACTGTAGGTATCTGCGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGTGTATCACAGAGAAAGCACTTTGCACGAGCCTCTATCCGTACACACTCCACTGCAACTGGTTTCTaGTCTAGGGAACAAAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: SSVSQRKHFARASIRTHSTATGF*SREQNV Trigger: GACATTTTGTTCCCTAGACAAGAAACCAGTTGCAGT...GGAGTGTGTACGGATAGAGGCTCGTGCAAAGTGCTTTCTCTGTGATACACTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR TCA 72 bp | AAACAAAACACGTTTTGCCCAGGCAGAGGTGGGCTTTaGAAGGATCATGTTCATATGCACACATTCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KQNTFCPGRGGL*KDHVHMHTFRL Trigger: GAGCCTGAATGTGTGCATATGAACATGATCCTTTCAAAGCCCACCTCTGCCTGGGCAAAACGTGTTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR TCA 72 bp | TGTCTTCTCTCTCGTAGTCCTGCAGGGAAAACTCCCTaGACCTCCCACAGAATGAGGTGGACATATATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CLLSRSPAGKTP*TSHRMRWTYIN Trigger: ATTTATATATGTCCACCTCATTCTGTGGGAGGTTCAGGGAGTTTTCCCTGCAGGACTACGAGAGAGAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR CCA 72 bp | CTCTCTCTGTCTCTGTGTAGGTCAGAGAACAACTTTTaGGAGCCTGTTCTCTCCTTCCATTTTGTGGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: LSLSLCRSENNF*EPVLSFHFVDF Trigger: GAAATCCACAAAATGGAAGGAGAGAACAGGCTCCCAAAAGTTGTTCTCTGACCTACACAGAGACAGAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAACAAAATAAGCCTGTCCCACTTCAGTGCCATCTGCTCGACACCTCAAGCTCTGCCTTCTTAATATaGGTTAATACATTTTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: IQQNKPVPLQCHLLDTSSSAFLI*VNTFWG Trigger: CCCCCAAAATGTATTAACCAATATTAAGAAGGCAGA...GCTTGAGGTGTCGAGCAGATGGCACTGAAGTGGGACAGGCTTATTTTGTTGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR GCA 72 bp | ATGAATACTGTGAACAGAACTTGCATGTTCTGCAAGTaGAATACCTACGTGTGGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: MNTVNRTCMFCK*NTYVWCVCVCV Trigger: CACACACACACACACACACCACACGTAGGTATTGCACTTGCAGAACATGCAAGTTCTGTTCACAGTATTCAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAAAGAACAGCTTACAAATGGACCAGAGTGCACATCAGGGCAAAATGCTACAAAAGTTCTCTAAGCTaGACTCACTTGGCATCTATG | + |
|
Preference number: 3 (lower is better) Translates to: EERTAYKWTRVHIRAKCYKSSLS*THLASM Trigger: CATAGATGCCAAGTGAGTCAAGCTTAGAGAACTTTT...GTAGCATTTTGCCCTGATGTGCACTCTGGTCCATTTGTAAGCTGTTCTTTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR TCA 72 bp | CAAGGGCTTGTCTTTGCAGTTTCCCAGAATCCCTTGTaGTGGCCTAATGGCTGTGAAAACAAGATTGAATTA | + |
|
Preference number: 3 (lower is better) Translates to: QGLVFAVSQNPL*WPNGCENKIEL Trigger: TAATTCAATCTTGTTTTCACAGCCATTAGGCCATCACAAGGGATTCTGGGAAACTGCAAAGACAAGCCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR GCA 72 bp | AGATCCTCCTGCCTTTACCTCCAAGGATTAAAAGTGTaGACTACTATGTCCCGATACAGTACATACTTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: RSSCLYLQGLKV*TTMSRYSTYFY Trigger: GTAGAAGTATGTACTGTATCGGGACATAGTAGTGCACACTTTTAATCCTTGGAGGTAAAGGCAGGAGGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR TCA 72 bp | GCCAAGCAGATCTTTGCTTTTGTCCCACCAACCATTTaGAAGTTAAATGCATCTGCTTTCTCAGTACCACTT | + |
|
Preference number: 3 (lower is better) Translates to: AKQIFAFVPPTI*KLNASAFSVPL Trigger: AAGTGGTACTGAGAAAGCAGATGCATTTAACTTTCAAATGGTTGGTGGGACAAAAGCAAAGATCTGCTTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR TCA 72 bp | CACAAGCCGATAGTGGCCCATTTGAAGTCCTTTCCCTaGGAGGTTATTAATGCTGCATATTATCTGTACTTT | + |
|
Preference number: 3 (lower is better) Translates to: HKPIVAHLKSFP*EVINAAYYLYF Trigger: AAAGTACAGATAATATGCAGCATTAATAACCTCTCAGGGAAAGGACTTCAAATGGGCCACTATCGGCTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR GCA 72 bp | AATTCCAAATTAAAGCTGTTACATTTTGAACTCAGCTaGCAGGCTCACAACCCCTGGTTACTAGTGATACCA | + |
|
Preference number: 3 (lower is better) Translates to: NSKLKLLHFELS*QAHNPWLLVIP Trigger: TGGTATCACTAGTAACCAGGGGTTGTGAGCCTGGCAGCTGAGTTCAAAATGTAACAGCTTTAATTTGGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR-3UTR CAA 90 bp | TATCGATGGGGTGTACACTCCAACATTCCAATGTTGGTGAAGAAAATTAAGCATAGGCAGAGGTGGGCTTaGAAAGGATCATGTTCATAT | + |
|
Preference number: 3 (lower is better) Translates to: YRWGVHSNIPMLVKKIKHRQRWA*KGSCSY Trigger: ATATGAACATGATCCTTTCAAAGCCCACCTCTGCCT...ATGCTTAATTTTCTTCACCAACATTGGAATGTTGGAGTGTACACCCCATCGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAACAACTTTTGGGAGCCTGTTCTCTCCTTCCATTTTGTGGATTTCAGGATGTAAAAGTTTCCGTTTaGGTTATGTGCATGTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: REQLLGACSLLPFCGFQDVKVSV*VMCMCE Trigger: TTCACACATGCACATAACCAAAACGGAAACTTTTAC...ATCCTGAAATCCACAAAATGGAAGGAGAGAACAGGCTCCCAAAAGTTGTTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR-3UTR CAA 90 bp | GAAAAATTCACAATTCATAACCTCACCACCTTAACAAGTACTTTCGTTTCTGTGTGTCTTCCCTTTGCATaGCTGCCAGTTGAATCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: EKFTIHNLTTLTSTFVSVCLPFA*LPVESR Trigger: TCTGGATTCAACTGGCAGCAATGCAAAGGGAAGACA...CACAGAAACGAAAGTACTTGTTAAGGTGGTGAGGTTATGAATTGTGAATTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR TCA 72 bp | AAGCTCTTTAAATTCCAAATTAAAGCTGTTACATTTTaGACTCAGCTGCCAGGCTCACAACCCCTGGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: KLFKFQIKAVTF*TQLPGSQPLVT Trigger: AGTAACCAGGGGTTGTGAGCCTGGCAGCTGAGTTCAAAATGTAACAGCTTTAATTTGGAATTTAAAGAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR TCA 72 bp | CCATTTCTGCCTTTTATGTGGAGGGTTCTGGCAGTTTaGGCTATGATCTTAAAATTCAGTCTCTATTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PFLPFMWRVLAV*AMILKFSLYSG Trigger: TCCTGAATAGAGACTGAATTTTAAGATCATAGCTCAAACTGCCAGAACCCTCCACATAAAAGGCAGAAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR CCA 72 bp | TCTCTAAGCTTGACTCACTTGGCATCTATGAGCTTGTaGCCCAGTTTCCTTTATACAAAAACAAACATGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLSLTHLASMSL*PSFLYTKTNMQ Trigger: TTGCATGTTTGTTTTTGTATAAAGGAAACTGGGCCACAAGCTCATAGATGCCAAGTGAGTCAAGCTTAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACGCATaGGAGTGTTTAAAGCTCTTTAAATTCCAAATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVCVCVYA*ECLKLFKFQIK Trigger: TTTAATTTGGAATTTAAAGAGCTTTAAACACTCGCATGCGTACACACACACACACACACACACACACACACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGTAGCCCTGGCTGTCCCGGATATTATGCAGACCAGGCTGCCCTCCAACCCCAGTGCGAACAAGTaGCCGGCGCGGCGCGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCVALAVPDIMQTRLPSNPSANK*PARRVQ Trigger: CTGCACGCGCCGCGCCGGCCACTTGTTCGCACTGGG...GTTGGAGGGCAGCCTGGTCTGCATAATATCCGGGACAGCCAGGGCTACACAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGTAGCCCTGGCTGTCCCGGATATTATGCAGACCAGGCTGCCCTCCAACACGCTGTGGTCTTGTTaGGCGCGTCCAGCAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCVALAVPDIMQTRLPSNTLWSC*ARPAAP Trigger: AGGCGCTGCTGGACGCGCTCAACAAGACCACAGCGT...GTTGGAGGGCAGCCTGGTCTGCATAATATCCGGGACAGCCAGGGCTACACAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS-3UTR GCA 90 bp | TGCGAACTGCTGGCTGGCAGTGGGTGGATGAATACTGTGAACAGAACTTGCATGTGGCAGCCAGGGCCTTaGTGGGGTCGCAGGGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: CELLAGSGWMNTVNRTCMWQPGP*WGRRGP Trigger: CGGGCCCCTGCGACCCCAGCAAGGCCCTGGCTGCCA...CATGCAAGTTCTGTTCACAGTATTCATCCACCCACTGCCAGCCAGCAGTTCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS-3UTR TCA 90 bp | GTTTCTTGTCTAGGGAACAAAATGTCTCCCTCCCCCACCACCACTATGCTTGATCAGGTCCAGGCAGCCTaGAAAGGCCACCCAGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: VSCLGNKMSPSPTTTMLDQVQAA*KGHPEP Trigger: CGGCTCTGGGTGGCCTTTTCAGGCTGCCTGGACCTG...ATCAAGCATAGTGGTGGTGGGGGAGGGAGACATTTTGTTCCCTAGACAAGAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 72 bp | TTTGTGGATTTCAGGATGGAACGCAGGTGGTCAAGCTaGGCAGTGAGCACCCTTAGCCCGAGCCACCTCACT | + |
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Preference number: 4 (lower is better) Translates to: FVDFRMERRWSS*AVSTLSPSHLT Trigger: AGTGAGGTGGCTCGGGCTAAGGGTGCTCACTGCCAAGCTTGACCACCTGCGTTCCATCCTGAAATCCACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 72 bp | CAGTGGAGGATGCGAGGCACAGGGATATCAAATGACTaGAGGTACTTGGAGAGAGGCAGGGTAGATGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: QWRMRGTGISND*RYLERGRVDGG Trigger: CCCACCATCTACCCTGCCTCTCTCCAAGTACCTCAAGTCATTTGATATCCCTGTGCCTCGCATCCTCCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS-3UTR GCA 90 bp | TATCGATGGGGTGTACACTCCAACATTCCAATGTTGGTGAAGAAAATTAAGCATTCGCTCTCCGCTTCGTaGCGCAGGCTGCGGGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: YRWGVHSNIPMLVKKIKHSLSAS*RRLRAL Trigger: GAGCGCCCGCAGCCTGCGGCACGAAGCGGAGAGCGA...ATGCTTAATTTTCTTCACCAACATTGGAATGTTGGAGTGTACACCCCATCGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS-3UTR CCA 90 bp | CTATTAATAGGAGGTAAAGCTCCTACAGACATTAGAGGTAATGGCCTGGCCGCCATCATCTCGCCCACCTaGAGGACTTCGCGCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: LLIGGKAPTDIRGNGLAAIISPT*RTSRSN Trigger: GTTGGAGCGCGAAGTCCTCCAGGTGGGCGAGATGAT...GGCGGCCAGGCCATTACCTCTAATGTCTGTAGGAGCTTTACCTCCTATTAATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 72 bp | CTGCCAAGTGCAGTAGTGTATCACAGAGAAAGCACTTaGCACGAGCCTCTATCCGTACACACTCCCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LPSAVVYHREST*HEPLSVHTPKA Trigger: GGCTTTGGGAGTGTGTACGGATAGAGGCTCGTGCAAAGTGCTTTCTCTGTGATACACTACTGCACTTGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS-3UTR TCA 90 bp | GTTTCTTGTCTAGGGAACAAAATGTCTCCCTCCCCCACCACCACTATGCTTGATTCCAGCGGGGCACGTTaGCTTTCATTTCCATGTCGT | + |
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Preference number: 4 (lower is better) Translates to: VSCLGNKMSPSPTTTMLDSSGAR*LSFPCR Trigger: ACGACATGGAAATGAAAGTCAACGTGCCCCGCTGGA...ATCAAGCATAGTGGTGGTGGGGGAGGGAGACATTTTGTTCCCTAGACAAGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 72 bp | GGCTGGCAGTGGGTGGATGAATACTGTGAACAGAACTaGCATGTTCTGCAAGTGCAATACCTACGTGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GWQWVDEYCEQN*HVLQVQYLRVV Trigger: CACCACACGTAGGTATTGCACTTGCAGAACATGCAAGTTCTGTTCACAGTATTCATCCACCCACTGCCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 72 bp | GCAGATACCTACAGTTTGGAACCCTCTGGGCTCTTTTaGCATCCGAGTCTGTGGAGAGTAAGTCTATCGATG | + |
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Preference number: 4 (lower is better) Translates to: ADTYSLEPSGLF*HPSLWRVSLSM Trigger: CATCGATAGACTTACTCTCCACAGACTCGGATGCAAAAAGAGCCCAGAGGGTTCCAAACTGTAGGTATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 72 bp | TTGAAGCAAGTGTGCAGAGGATACACCACAACCTTCTaGGCTGTGACCCTAAATGGGGTCACGACACAAAAA | + |
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Preference number: 4 (lower is better) Translates to: LKQVCRGYTTTF*AVTLNGVTTQK Trigger: TTTTTGTGTCGTGACCCCATTTAGGGTCACAGCCAAGAAGGTTGTGGTGTATCCTCTGCACACTTGCTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 72 bp | TTTCCAGAAATGTCTACCGTCCCAGTCATCAGCCTTTaGCCAGTTCTCAGGAACCAGAAGACACTGCATTTG | + |
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Preference number: 4 (lower is better) Translates to: FPEMSTVPVISL*PVLRNQKTLHL Trigger: CAAATGCAGTGTCTTCTGGTTCCTGAGAACTGGCAAAAGGCTGATGACTGGGACGGTAGACATTTCTGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 72 bp | AGTTCTCTAAGCTTGACTCACTTGGCATCTATGAGCTaGTGGCCCAGTTTCCTTTATACAAAAACAAACATG | + |
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Preference number: 4 (lower is better) Translates to: SSLSLTHLASMS*WPSFLYTKTNM Trigger: CATGTTTGTTTTTGTATAAAGGAAACTGGGCCACAAGCTCATAGATGCCAAGTGAGTCAAGCTTAGAGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 72 bp | CATATACAATGTAAAAGTTCTCTAAGCTTGACTCACTaGGCATCTATGAGCTTGTGGCCCAGTTTCCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: HIQCKSSLSLTH*ASMSLWPSFLY Trigger: ATAAAGGAAACTGGGCCACAAGCTCATAGATGCCAAGTGAGTCAAGCTTAGAGAACTTTTACATTGTATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| 3UTR CAA 72 bp | GGACCTCATGTAAATTCGACATCTCTTCAGCCAAAATaGCTTAACAGAATCATACATTCTTTACACAGCATC | + |
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Preference number: 4 (lower is better) Translates to: GPHVNSTSLQPK*LNRIIHSLHSI Trigger: GATGCTGTGTAAAGAATGTATGATTCTGTTAAGCAATTTTGGCTGAAGAGATGTCGAATTTACATGAGGTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS GCA 90 bp | TCAGGGCGCGCGCAGCTACAGCAGAGGAGCCGCCCGTCACCCCAGTaGGAACAAGTGGCCGGCGCGGCGCGTGCAGCGGGAAGGTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SGRAQLQQRSRPSPQ*EQVAGAARAAGRWL Trigger: GAGCCACCTTCCCGCTGCACGCGCCGCGCCGGCCACTTGTTCGCACTGGGGTGACGGGCGGCTCCTCTGCTGTAGCTGCGCGCGCCCTGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS GCA 90 bp | GGGCCTTGCTGGGGTCGCAGGGGCCCGCGCGCTCCTCTACCGAAATaGCACCGGCTGAGGACGCGCCGGCACTGGCACCGGACAGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: GPCWGRRGPRAPLPK*HRLRTRRHWHRTGV Trigger: AACTCCTGTCCGGTGCCAGTGCCGGCGCGTCCTCAGCCGGTGGCATTTCGGTAGAGGAGCGCGCGGGCCCCTGCGACCCCAGCAAGGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS CCA 90 bp | CCCCAGTGCGAACAAGTGGCCGGCGCGGCGCGTGCAGCGGGAAGGTaGCTCCCAGCGCTAGTGCGCGCTGCATGTCGGCTTCGAGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: PQCEQVAGAARAAGR*LPALVRAACRLRAG Trigger: ACCTGCTCGAAGCCGACATGCAGCGCGCACTAGCGCTGGGAGCCACCTTCCCGCTGCACGCGCCGCGCCGGCCACTTGTTCGCACTGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS GCA 90 bp | TCCAACTGGGGCAGATCGGCGACATCGAAGTCGCTCTCCGCTTCGTaGCGCAGGCTGCGGGCGCTCAGGGCGCGCGCAGCTACAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SNWGRSATSKSLSAS*RRLRALRARAATAE Trigger: CTCTGCTGTAGCTGCGCGCGCCCTGAGCGCCCGCAGCCTGCGGCACGAAGCGGAGAGCGACTTCGATGTCGCCGATCTGCCCCAGTTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS CCA 90 bp | ATGTCGTCAATCATCTCGCCCACCTGGAGGACTTCGCGCTCCAACTaGGGCAGATCGGCGACATCGAAGTCGCTCTCCGCTTCGTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: MSSIISPTWRTSRSN*GRSATSKSLSASCR Trigger: GCGGCACGAAGCGGAGAGCGACTTCGATGTCGCCGATCTGCCCCAGTTGGAGCGCGAAGTCCTCCAGGTGGGCGAGATGATTGACGACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS TCA 90 bp | CGGCGCCTGCCGCTTGTCGCGCCTGTACAGTCCAGCGGGGCACGTTaGCTTTCATTTCCATGTCGTCAATCATCTCGCCCACCTGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: RRLPLVAPVQSSGAR*LSFPCRQSSRPPGG Trigger: TCCTCCAGGTGGGCGAGATGATTGACGACATGGAAATGAAAGTCAACGTGCCCCGCTGGACTGTACAGGCGCGACAAGCGGCAGGCGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS-3UTR CAA 90 bp | GCACGCAGATACCTACAGTTTGGAACCCTCTGGGCTCTTTTTGCATCCGAGTCTCACGCTGTGGTCTTGTaGAGCGCGTCCAGCAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: ARRYLQFGTLWALFASESHAVVL*SASSSA Trigger: GGCGCTGCTGGACGCGCTCAACAAGACCACAGCGTG...AGACTCGGATGCAAAAAGAGCCCAGAGGGTTCCAAACTGTAGGTATCTGCGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS CCA 90 bp | GGCACGTTGACTTTCATTTCCATGTCGTCAATCATCTCGCCCACCTaGAGGACTTCGCGCTCCAACTGGGGCAGATCGGCGACATCGAAG | + |
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Preference number: 5 (lower is better) Translates to: GTLTFISMSSIISPT*RTSRSNWGRSATSK Trigger: CTTCGATGTCGCCGATCTGCCCCAGTTGGAGCGCGAAGTCCTCCAGGTGGGCGAGATGATTGACGACATGGAAATGAAAGTCAACGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS-3UTR CAA 90 bp | AGAGAACAACTTTTGGGAGCCTGTTCTCTCCTTCCATTTTGTGGATTTCAGGATGTCCAGCGGGGCACGTaGACTTTCATTTCCATGTCG | + |
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Preference number: 5 (lower is better) Translates to: REQLLGACSLLPFCGFQDVQRGT*TFISMS Trigger: CGACATGGAAATGAAAGTCAACGTGCCCCGCTGGAC...ATCCTGAAATCCACAAAATGGAAGGAGAGAACAGGCTCCCAAAAGTTGTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS CCA 72 bp | TCCGGTCCCGGAGCGCGACGGTCAACCGGGCGCCGGTaGCCACGGCCAGCTCCCGCGCCTTCTGGCGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SGPGARRSTGRR*PRPAPAPSGGS Trigger: AGACCCGCCAGAAGGCGCGGGAGCTGGCCGTGGCCACCGGCGCCCGGTTGACCGTCGCGCTCCGGGACCGGA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS GCA 72 bp | TGGGGTCGCAGGGGCCCGCGCGCTCCTCTACCGAAATaGCACCGGCTGAGGACGCGCCGGCACTGGCACCGG | + |
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Preference number: 6 (lower is better) Translates to: WGRRGPRAPLPK*HRLRTRRHWHR Trigger: CCGGTGCCAGTGCCGGCGCGTCCTCAGCCGGTGGCATTTCGGTAGAGGAGCGCGCGGGCCCCTGCGACCCCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS GCA 72 bp | GCGCAGCTACAGCAGAGGAGCCGCCCGTCACCCCAGTaGGAACAAGTGGCCGGCGCGGCGCGTGCAGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: AQLQQRSRPSPQ*EQVAGAARAAG Trigger: TCCCGCTGCACGCGCCGCGCCGGCCACTTGTTCGCACTGGGGTGACGGGCGGCTCCTCTGCTGTAGCTGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS GCA 72 bp | CGCGCCGGCACTGGCACCGGACAGGAGTTCGGCGCCTaGCGCTTGTCGCGCCTGTACAGTCCAGCGGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: RAGTGTGQEFGA*RLSRLYSPAGH Trigger: GTGCCCCGCTGGACTGTACAGGCGCGACAAGCGGCAGGCGCCGAACTCCTGTCCGGTGCCAGTGCCGGCGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS GCA 72 bp | GGCAGATCGGCGACATCGAAGTCGCTCTCCGCTTCGTaGCGCAGGCTGCGGGCGCTCAGGGCGCGCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GRSATSKSLSAS*RRLRALRARAA Trigger: AGCTGCGCGCGCCCTGAGCGCCCGCAGCCTGCGGCACGAAGCGGAGAGCGACTTCGATGTCGCCGATCTGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS CCA 72 bp | GAACAAGTGGCCGGCGCGGCGCGTGCAGCGGGAAGGTaGCTCCCAGCGCTAGTGCGCGCTGCATGTCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: EQVAGAARAAGR*LPALVRAACRL Trigger: AAGCCGACATGCAGCGCGCACTAGCGCTGGGAGCCACCTTCCCGCTGCACGCGCCGCGCCGGCCACTTGTTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS CAA 72 bp | GGCACTGGCACCGGACAGGAGTTCGGCGCCTGCCGCTaGTCGCGCCTGTACAGTCCAGCGGGGCACGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: GTGTGQEFGACR*SRLYSPAGHVD Trigger: GTCAACGTGCCCCGCTGGACTGTACAGGCGCGACAAGCGGCAGGCGCCGAACTCCTGTCCGGTGCCAGTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS CAA 90 bp | GGACGCGCCGGCACTGGCACCGGACAGGAGTTCGGCGCCTGCCGCTaGTCGCGCCTGTACAGTCCAGCGGGGCACGTTGACTTTCATTTC | + |
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Preference number: 6 (lower is better) Translates to: GRAGTGTGQEFGACR*SRLYSPAGHVDFHF Trigger: GAAATGAAAGTCAACGTGCCCCGCTGGACTGTACAGGCGCGACAAGCGGCAGGCGCCGAACTCCTGTCCGGTGCCAGTGCCGGCGCGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS TCA 72 bp | GCGCTGCATGTCGGCTTCGAGCAGGTCCAGGCAGCCTaGAAAGGCCACCCAGAGCCGCTCAAACTCCGCGCG | + |
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Preference number: 6 (lower is better) Translates to: ALHVGFEQVQAA*KGHPEPLKLRA Trigger: CGCGCGGAGTTTGAGCGGCTCTGGGTGGCCTTTTCAGGCTGCCTGGACCTGCTCGAAGCCGACATGCAGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS CCA 72 bp | ATCATCTCGCCCACCTGGAGGACTTCGCGCTCCAACTaGGGCAGATCGGCGACATCGAAGTCGCTCTCCGCT | + |
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Preference number: 6 (lower is better) Translates to: IISPTWRTSRSN*GRSATSKSLSA Trigger: AGCGGAGAGCGACTTCGATGTCGCCGATCTGCCCCAGTTGGAGCGCGAAGTCCTCCAGGTGGGCGAGATGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS CAA 90 bp | TCGGCGCCTGCCGCTTGTCGCGCCTGTACAGTCCAGCGGGGCACGTaGACTTTCATTTCCATGTCGTCAATCATCTCGCCCACCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SAPAACRACTVQRGT*TFISMSSIISPTWR Trigger: CCTCCAGGTGGGCGAGATGATTGACGACATGGAAATGAAAGTCAACGTGCCCCGCTGGACTGTACAGGCGCGACAAGCGGCAGGCGCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS CAA 72 bp | GCCGCTTGTCGCGCCTGTACAGTCCAGCGGGGCACGTaGACTTTCATTTCCATGTCGTCAATCATCTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: AACRACTVQRGT*TFISMSSIISP Trigger: GGGCGAGATGATTGACGACATGGAAATGAAAGTCAACGTGCCCCGCTGGACTGTACAGGCGCGACAAGCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS TCA 72 bp | CCGCTTGTCGCGCCTGTACAGTCCAGCGGGGCACGTTaGCTTTCATTTCCATGTCGTCAATCATCTCGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PLVAPVQSSGAR*LSFPCRQSSRP Trigger: TGGGCGAGATGATTGACGACATGGAAATGAAAGTCAACGTGCCCCGCTGGACTGTACAGGCGCGACAAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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| CDS CCA 72 bp | ACTTTCATTTCCATGTCGTCAATCATCTCGCCCACCTaGAGGACTTCGCGCTCCAACTGGGGCAGATCGGCG | + |
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Preference number: 6 (lower is better) Translates to: TFISMSSIISPT*RTSRSNWGRSA Trigger: CGCCGATCTGCCCCAGTTGGAGCGCGAAGTCCTCCAGGTGGGCGAGATGATTGACGACATGGAAATGAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069912.6 |
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