Pregenerated sensors for RGS9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020599Ensembl transcript IDs: ENSMUST00000020920.10, ENSMUST00000103062.9, ENSMUST00000106704.3, ENSMUST00000106706.8
Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCACCCTGGATCTGGGTGATCCTGGATGCAGTACTTGGGCTGGGTaGTGGGAAGAGCTGGGGGCAGTACTTGGGCAGGGTGATGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: GTLDLGDPGCSTWAG*WEELGAVLGQGDAR Trigger: CCTTGCATCACCCTGCCCAAGTACTGCCCCCAGCTCTTCCCATCACCCAGCCCAAGTACTGCATCCAGGATCACCCAGATCCAGGGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR TCA 90 bp | TTGGGCTGGGTGATGGGAAGAGCTGGGGGCAGTACTTGGGCAGGGTaGTGCAAGGAGCTGGATGAGGTACTTGGGCTGGGTGATGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LGWVMGRAGGSTWAG*CKELDEVLGLGDGK Trigger: CTTCCCATCACCCAGCCCAAGTACCTCATCCAGCTCCTTGCATCACCCTGCCCAAGTACTGCCCCCAGCTCTTCCCATCACCCAGCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR CCA 90 bp | TGGGAAGAGCTGGGGGCAGTACTTGGGCAGGGTGATGCAAGGAGCTaGATGAGGTACTTGGGCTGGGTGATGGGAAGAGCTGGATGCAGT | + |
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Preference number: 1 (lower is better) Translates to: WEELGAVLGQGDARS*MRYLGWVMGRAGCS Trigger: ACTGCATCCAGCTCTTCCCATCACCCAGCCCAAGTACCTCATCCAGCTCCTTGCATCACCCTGCCCAAGTACTGCCCCCAGCTCTTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR TCA 90 bp | TGCCTAGTGAGACCCGGGAGCCTCCTGTCTCTGCCTCCCTACTGCTaGGATGATGACAAGCACACACTGGCATGTTTGCACAGCCAAGCT | + |
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Preference number: 1 (lower is better) Translates to: CLVRPGSLLSLPPYC*DDDKHTLACLHSQA Trigger: AGCTTGGCTGTGCAAACATGCCAGTGTGTGCTTGTCATCATCTCAGCAGTAGGGAGGCAGAGACAGGAGGCTCCCGGGTCTCACTAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR CCA 90 bp | ACCAGTGACCGTTGTCTGGTGAAGCCCGAGGCCCTGGACACCTGCTaGCCTCACAGCCTCAATTTTCATGCTCAATGGGCTTTTGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: TSDRCLVKPEALDTC*PHSLNFHAQWAFAS Trigger: AGAGGCAAAAGCCCATTGAGCATGAAAATTGAGGCTGTGAGGCCAGCAGGTGTCCAGGGCCTCGGGCTTCACCAGACAACGGTCACTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR GCA 90 bp | GCCCGAGGCCCTGGACACCTGCTGGCCTCACAGCCTCAATTTTCATaGTCAATGGGCTTTTGCCTCTGTTTAGGGACAACAGAGCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: ARGPGHLLASQPQFS*SMGFCLCLGTTELK Trigger: CTTGAGCTCTGTTGTCCCTAAACAGAGGCAAAAGCCCATTGAGCATGAAAATTGAGGCTGTGAGGCCAGCAGGTGTCCAGGGCCTCGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR CCA 90 bp | AAGACCATTCTGAGAATGAGAACTCTGGTGCTGCATCAGGCACCCTaGATCTGGGTGATCCTGGATGCAGTACTTGGGCTGGGTGATGGG | + |
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Preference number: 1 (lower is better) Translates to: KTILRMRTLVLHQAP*IWVILDAVLGLGDG Trigger: CCCATCACCCAGCCCAAGTACTGCATCCAGGATCACCCAGATCCAGGGTGCCTGATGCAGCACCAGAGTTCTCATTCTCAGAATGGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR TCA 90 bp | TTGGGCTGGGTGATGGGAAGAGCTGGATGCAGTACTTGTGCTAAGTaGTGGGAGGAGCTGGATGAGGTACTTGAACTGAGTGATGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LGWVMGRAGCSTCAK*WEELDEVLELSDGR Trigger: CCTCCCATCACTCAGTTCAAGTACCTCATCCAGCTCCTCCCATCACTTAGCACAAGTACTGCATCCAGCTCTTCCCATCACCCAGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR TCA 90 bp | TTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTaGGAGCAAGTGTGCCCCACGTCTGATGGCGTCTGCCAGGACCAT | + |
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Preference number: 1 (lower is better) Translates to: FQSSNIILMHLGTWA*EQVCPTSDGVCQDH Trigger: ATGGTCCTGGCAGACGCCATCAGACGTGGGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| 3UTR TCA 90 bp | AGTATAACCTGTCCTGGGGTAGAGGAAATGAGGCTCAGTCCAGAATaGGACAGGGCTTATAACCAGACCAGTGCCCTGCCTCTATCCAAG | + |
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Preference number: 1 (lower is better) Translates to: SITCPGVEEMRLSPE*DRAYNQTSALPLSK Trigger: CTTGGATAGAGGCAGGGCACTGGTCTGGTTATAAGCCCTGTCTCATTCTGGACTGAGCCTCATTTCCTCTACCCCAGGACAGGTTATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR TCA 90 bp | ATGTGCTCCCTAAAGCAATGTGGCTGGGCACTGCCACTAACTTGGTaGCCTGGAGTAGGAAAACAAAGCCAGGTAACCCTTGATCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: MCSLKQCGWALPLTW*PGVGKQSQVTLDLG Trigger: TCCCAGATCAAGGGTTACCTGGCTTTGTTTTCCTACTCCAGGTCACCAAGTTAGTGGCAGTGCCCAGCCACATTGCTTTAGGGAGCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| 3UTR TCA 90 bp | ATTAAGTGTTGCCCCTCATCGTTGGGTAACAGTGTGGCCCGGCCATaGGTATCACTATGGCAGTATAACCTGTCCTGGGGTAGAGGAAAT | + |
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Preference number: 1 (lower is better) Translates to: IKCCPSSLGNSVARP*VSLWQYNLSWGRGN Trigger: ATTTCCTCTACCCCAGGACAGGTTATACTGCCATAGTGATACTCATGGCCGGGCCACACTGTTACCCAACGATGAGGGGCAACACTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR GCA 90 bp | GTTCTCCACACTGAGTTCTCTGAACTGAGACAAAGATCAAACCGTTaGCTTCCTAAGGCCTTATGGAAGACGCTCCAAGCTCTCTGTGAC | + |
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Preference number: 1 (lower is better) Translates to: VLHTEFSELRQRSNR*LPKALWKTLQALCD Trigger: GTCACAGAGAGCTTGGAGCGTCTTCCATAAGGCCTTAGGAAGGCAACGGTTTGATCTTTGTCTCAGTTCAGAGAACTCAGTGTGGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR CCA 90 bp | AAGGTACTCCTTGTAGGGCCAAATATTCTTTGGAATGAAACAGGGTaGTGGGGAGACATACACACTTGGCCTTTTGTGTGCCTGCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: KVLLVGPNILWNETG*WGDIHTWPFVCLPS Trigger: TGAGGGCAGGCACACAAAAGGCCAAGTGTGTATGTCTCCCCACCACCCTGTTTCATTCCAAAGAATATTTGGCCCTACAAGGAGTACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR CCA 90 bp | GCCCTGCCTCTATCCAAGGTACTCCTTGTAGGGCCAAATATTCTTTaGAATGAAACAGGGTGGTGGGGAGACATACACACTTGGCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: ALPLSKVLLVGPNIL*NETGWWGDIHTWPF Trigger: AAAAGGCCAAGTGTGTATGTCTCCCCACCACCCTGTTTCATTCCAAAGAATATTTGGCCCTACAAGGAGTACCTTGGATAGAGGCAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR GCA 90 bp | AGGTGGGGTGAGAAGTTTCACACAGCTATTCTAAAGACACGCTCCTaGAAAAGCAACCTTGGAGGGTACAGGGTCAGTTTCTTGATAAGG | + |
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Preference number: 1 (lower is better) Translates to: RWGEKFHTAILKTRS*KSNLGGYRVSFLIR Trigger: CCTTATCAAGAAACTGACCCTGTACCCTCCAAGGTTGCTTTTGCAGGAGCGTGTCTTTAGAATAGCTGTGTGAAACTTCTCACCCCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| 3UTR CCA 90 bp | GACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTAGAGAGGTaGGGTGAGAAGTTTCACACAGCTATTCTAAAGACACGCTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: DRSQADSEVASKLER*GEKFHTAILKTRSC Trigger: GCAGGAGCGTGTCTTTAGAATAGCTGTGTGAAACTTCTCACCCCACCTCTCTAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| 3UTR TCA 90 bp | AGAAAGGTAGTTCCGAAATCTAGCAAATATTGCCAGAAGTATATATaGTACGGATCTGATACATCCTTCCCCTGGCCACAACCAGCATTG | + |
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Preference number: 1 (lower is better) Translates to: RKVVPKSSKYCQKYI*YGSDTSFPWPQPAL Trigger: CAATGCTGGTTGTGGCCAGGGGAAGGATGTATCAGATCCGTATCATATATACTTCTGGCAATATTTGCTAGATTTCGGAACTACCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| 3UTR TCA 90 bp | TCGCCTTGTCTCCTCTGGCCTGAGTCTTTCATTCCTATAAGCTATTaGTTCATACGTTATGCCCAAGGGGATAGAAAAATAGAAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: SPCLLWPESFIPISY*FIRYAQGDRKIERK Trigger: TTTTCTTTCTATTTTTCTATCCCCTTGGGCATAACGTATGAATCAATAGCTTATAGGAATGAAAGACTCAGGCCAGAGGAGACAAGGCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGAAGAGCTGGGGGCAGTACTTGGGCAGGGTGATGCAAGGAGCTGGATGAGGGAGGCCCTGGACACCTaGTGGCCTCACAGCCTCAAT | + |
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Preference number: 2 (lower is better) Translates to: WEELGAVLGQGDARSWMREALDT*WPHSLN Trigger: ATTGAGGCTGTGAGGCCAGCAGGTGTCCAGGGCCTC...CCTCATCCAGCTCCTTGCATCACCCTGCCCAAGTACTGCCCCCAGCTCTTCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR CCA 90 bp | TGGGAAGAGCTGGGGGCAGTACTTGGGCAGGGTGATGCAAGGAGCTGGATGAGGACTCTCTCCCATGCATaGCACAGGGGACACCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: WEELGAVLGQGDARSWMRTLSHA*HRGHQC Trigger: GCACTGGTGTCCCCTGTGCCATGCATGGGAGAGAGT...CCTCATCCAGCTCCTTGCATCACCCTGCCCAAGTACTGCCCCCAGCTCTTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR CAA 90 bp | GGGGCAGTACTTGGGCAGGGTGATGCAAGGAGCTGGATGAGGTACTaGGGCTGGGTGATGGGAAGAGCTGGATGCAGTACTTGTGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: GAVLGQGDARSWMRY*GWVMGRAGCSTCAK Trigger: CTTAGCACAAGTACTGCATCCAGCTCTTCCCATCACCCAGCCCAAGTACCTCATCCAGCTCCTTGCATCACCCTGCCCAAGTACTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR CCA 90 bp | TGGGAAGAGCTGGGGGCAGTACTTGGGCAGGGTGATGCAAGGAGCTGGATGAGGTTAAAACCCACTTGCTaGGCATCAGAGCCCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: WEELGAVLGQGDARSWMRLKPTC*ASEPTR Trigger: TCTGGTGGGCTCTGATGCCCAGCAAGTGGGTTTTAA...CCTCATCCAGCTCCTTGCATCACCCTGCCCAAGTACTGCCCCCAGCTCTTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR CCA 90 bp | AAAACCCACTTGCTGGGCATCAGAGCCCACCAGACAGGACTTAGAGGGGGTTTAATGGGCAGAGGGGGATaGGAAGGTAGGAGAGGCGAT | + |
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Preference number: 2 (lower is better) Translates to: KTHLLGIRAHQTGLRGGLMGRGG*EGRRGD Trigger: ATCGCCTCTCCTACCTTCCCATCCCCCTCTGCCCAT...TAAACCCCCTCTAAGTCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTGGGTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR TCA 90 bp | CACTTGCTGGGCATCAGAGCCCACCAGACAGGACTTAGAGGGGGTTTAGATGGTACCCATGGAATGGTGTaGCTCTCCCCTTGTACATCC | + |
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Preference number: 2 (lower is better) Translates to: HLLGIRAHQTGLRGGLDGTHGMV*LSPCTS Trigger: GGATGTACAAGGGGAGAGTCACACCATTCCATGGGT...ACCATCTAAACCCCCTCTAAGTCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR TCA 90 bp | GTAGGGCCAAATATTCTTTGGAATGAAACAGGGTGGTGGGGAGACATACACACTGTGACCGTTGTCTGGTaGAGCCCGAGGCCCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: VGPNILWNETGWWGDIHTVTVVW*SPRPWT Trigger: TGTCCAGGGCCTCGGGCTTCACCAGACAACGGTCAC...AGTGTGTATGTCTCCCCACCACCCTGTTTCATTCCAAAGAATATTTGGCCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR TCA 90 bp | GTAAAGCCTCTTTTAAAACCCACTTGCTGGGCATCAGAGCCCACCAGACAGGACGCCTGGTCTACAGAGTaGGTTCTAGGACAGTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: VKPLLKPTCWASEPTRQDAWSTE*VLGQSG Trigger: CCCTGACTGTCCTAGAACTCACTCTGTAGACCAGGC...GTCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTGGGTTTTAAAAGAGGCTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR GCA 90 bp | AAAACCCACTTGCTGGGCATCAGAGCCCACCAGACAGGACTTAGAGGGGGTTTAGCTTGTGAGAAACGCTaGCATGACACTCAGACCCAG | + |
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Preference number: 2 (lower is better) Translates to: KTHLLGIRAHQTGLRGGLACEKR*HDTQTQ Trigger: CTGGGTCTGAGTGTCATGGCAGCGTTTCTCACAAGC...TAAACCCCCTCTAAGTCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTGGGTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR CCA 90 bp | TGGAATGAAACAGGGTGGTGGGGAGACATACACACTTGGCCTTTTGTGTGCCTGGAGACTAGATCCTCCTaGCGCTGGGCAACCTTACCA | + |
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Preference number: 2 (lower is better) Translates to: WNETGWWGDIHTWPFVCLETRSS*RWATLP Trigger: TGGTAAGGTTGCCCAGCGCCAGGAGGATCTAGTCTC...CAGGCACACAAAAGGCCAAGTGTGTATGTCTCCCCACCACCCTGTTTCATTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR CCA 90 bp | ACCTTGTCGGACCTCAAGGCATGGAATGAGCTGCCCCTGAGTGCTGAGATAGCACTAAAGCAATGTGGCTaGGCACTGCCACTAACTTGG | + |
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Preference number: 2 (lower is better) Translates to: TLSDLKAWNELPLSAEIALKQCG*ALPLTW Trigger: CCAAGTTAGTGGCAGTGCCCAGCCACATTGCTTTAG...TGCTATCTCAGCACTCAGGGGCAGCTCATTCCATGCCTTGAGGTCCGACAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAGGAGCTGGATGAGGTACTTGGGCTGGGTGATGGGAAGAGCTGGATGCAGTCTGAGTTCTCTGAACTaGGACAAAGATCAAACCGTT | + |
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Preference number: 2 (lower is better) Translates to: ARSWMRYLGWVMGRAGCSLSSLN*DKDQTV Trigger: AACGGTTTGATCTTTGTCTCAGTTCAGAGAACTCAG...ACTGCATCCAGCTCTTCCCATCACCCAGCCCAAGTACCTCATCCAGCTCCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR TCA 90 bp | ACCTTGTCGGACCTCAAGGCATGGAATGAGCTGCCCCTGAGTGCTGAGATAGCATTGTCTCCTCTGGCCTaGGTCTTTCATTCCTATAAG | + |
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Preference number: 2 (lower is better) Translates to: TLSDLKAWNELPLSAEIALSPLA*VFHSYK Trigger: CTTATAGGAATGAAAGACTCAGGCCAGAGGAGACAA...TGCTATCTCAGCACTCAGGGGCAGCTCATTCCATGCCTTGAGGTCCGACAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCAGCCTGGTCTACAGAGTGAGTTCTAGGACAGTCAGGGCTACACAGAGAAAAGGCTTGAGAGCTTaGCTAAAAGTGGTGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: KASLVYRVSSRTVRATQRKGLRA*LKVVEL Trigger: CAGCTCCACCACTTTTAGCCAAGCTCTCAAGCCTTT...TCTCTGTGTAGCCCTGACTGTCCTAGAACTCACTCTGTAGACCAGGCTGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGAGCTGGATGAGGTACTTGGGCTGGGTGATGGGAAGAGCTGGATGCAGTGGTATAAGGACAGAGTaGCCTAAATCCATCTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: ARSWMRYLGWVMGRAGCSGIRTE*PKSISK Trigger: TTTGGAGATGGATTTAGGCCACTCTGTCCTTATACC...ACTGCATCCAGCTCTTCCCATCACCCAGCCCAAGTACCTCATCCAGCTCCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR TCA 90 bp | GTAAAGCCTCTTTTAAAACCCACTTGCTGGGCATCAGAGCCCACCAGACAGGACACTTTAAAACTTAACTaGGCTGGCCAGTGGTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: VKPLLKPTCWASEPTRQDTLKLN*AGQWWC Trigger: GCACCACCACTGGCCAGCTCAGTTAAGTTTTAAAGT...GTCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTGGGTTTTAAAAGAGGCTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGCCAGCCTGGTCTACAGAGTGAGTTCTAGGACAGTCAGGGCTACACAGAGAAAATATTCTTTGGAATaGAACAGGGTGGTGGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: KASLVYRVSSRTVRATQRKYSLE*NRVVGR Trigger: TCTCCCCACCACCCTGTTTCATTCCAAAGAATATTT...TCTCTGTGTAGCCCTGACTGTCCTAGAACTCACTCTGTAGACCAGGCTGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCAGTAAAGCCTCTTTTAAAACCCACTTGCTGGGCATCAGAGCCCACCAGGGGCCAAATATTCTTTaGAATGAAACAGGGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: ELSKASFKTHLLGIRAHQGPNIL*NETGWW Trigger: CCACCACCCTGTTTCATTCCAAAGAATATTTGGCCC...CTGGTGGGCTCTGATGCCCAGCAAGTGGGTTTTAAAAGAGGCTTTACTGAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCTGTCTCTGCCTCCCTACTGCTGAGATGATGACAAGCACACACTGGCATTCAAGGTATAGGAACTaGAAAGAACACTGCATTCTA | + |
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Preference number: 2 (lower is better) Translates to: ASCLCLPTAEMMTSTHWHSRYRN*KEHCIL Trigger: TAGAATGCAGTGTTCTTTTCAGTTCCTATACCTTGA...ATGCCAGTGTGTGCTTGTCATCATCTCAGCAGTAGGGAGGCAGAGACAGGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR CAA 90 bp | CATACATACATACTAGGACACTCAAGTTCTGAAAGGCTTGAGAGCTaGGCTAAAAGTGGTGGAGCTGAGTTCCTTCCTAGGGCCTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: HTYILGHSSSERLES*AKSGGAEFLPRALA Trigger: AGCTAAGGCCCTAGGAAGGAACTCAGCTCCACCACTTTTAGCCAAGCTCTCAAGCCTTTCAGAACTTGAGTGTCCTAGTATGTATGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR-3UTR CCA 90 bp | ACCTTGTCGGACCTCAAGGCATGGAATGAGCTGCCCCTGAGTGCTGAGATAGCAGAAAATAAATCACCATaGCTAAGAACAAGCTCACTA | + |
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Preference number: 2 (lower is better) Translates to: TLSDLKAWNELPLSAEIAENKSP*LRTSSL Trigger: TAGTGAGCTTGTTCTTAGCCATGGTGATTTATTTTC...TGCTATCTCAGCACTCAGGGGCAGCTCATTCCATGCCTTGAGGTCCGACAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| 3UTR-3UTR TCA 90 bp | ACACGCTCCTGCAAAAGCAACCTTGGAGGGTACAGGGTCAGTTTCTTGATAAGGAACACTACATTTTGCTaGCCTTCTAAATGCTACTCC | + |
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Preference number: 2 (lower is better) Translates to: TRSCKSNLGGYRVSFLIRNTTFC*PSKCYS Trigger: GGAGTAGCATTTAGAAGGTCAGCAAAATGTAGTGTT...CCTTATCAAGAAACTGACCCTGTACCCTCCAAGGTTGCTTTTGCAGGAGCGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| 3UTR-3UTR TCA 90 bp | AATGAGCTGCCCCTGAGTGCTGAGATAGCAAAGTCTATAACTATGGAGAAAGGTGTCCCCTCTGAACTCTaGACACTACATTTTGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: NELPLSAEIAKSITMEKGVPSEL*TLHFAD Trigger: GTCAGCAAAATGTAGTGTTCAGAGTTCAGAGGGGAC...ACCTTTCTCCATAGTTATAGACTTTGCTATCTCAGCACTCAGGGGCAGCTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| 3UTR-3UTR TCA 90 bp | AATGAGCTGCCCCTGAGTGCTGAGATAGCAAAGTCTATAACTATGGAGAAAGGTCTGGGAAGTCCCCTCTaGACTCTGAACACTACATTT | + |
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Preference number: 2 (lower is better) Translates to: NELPLSAEIAKSITMEKGLGSPL*TLNTTF Trigger: AAATGTAGTGTTCAGAGTTCAGAGGGGACTTCCCAG...ACCTTTCTCCATAGTTATAGACTTTGCTATCTCAGCACTCAGGGGCAGCTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| 3UTR-3UTR TCA 90 bp | TATAAGAGCCCTGTGGACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTACTGCCACTAACTTGGTaGCCTGGAGTAGGAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: YKSPVDRSQADSEVASKLLPLTW*PGVGKQ Trigger: TTGTTTTCCTACTCCAGGTCACCAAGTTAGTGGCAG...TAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTCCACAGGGCTCTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| 3UTR-3UTR CCA 90 bp | TATAAGAGCCCTGTGGACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTAACTAACTTGGTGACCTaGAGTAGGAAAACAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: YKSPVDRSQADSEVASKLTNLVT*SRKTKP Trigger: TGGCTTTGTTTTCCTACTCCAGGTCACCAAGTTAGT...TAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTCCACAGGGCTCTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| 3UTR-3UTR GCA 90 bp | CAATTACATGTTCTAATGATAACAGTAACAGCTACTCTTACAGCGAACATCTCACCCAACATTAAGTGTTaGCCCTCATCGTTGGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: QLHVLMITVTATLTANISPNIKC*PSSLGN Trigger: GTTACCCAACGATGAGGGGCAACACTTAATGTTGGG...TGAGATGTTCGCTGTAAGAGTAGCTGTTACTGTTATCATTAGAACATGTAATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| 3UTR TCA 72 bp | GTGATGGGAAGAGCTGGGGGCAGTACTTGGGCAGGGTaGTGCAAGGAGCTGGATGAGGTACTTGGGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VMGRAGGSTWAG*CKELDEVLGLG Trigger: ACCCAGCCCAAGTACCTCATCCAGCTCCTTGCATCACCCTGCCCAAGTACTGCCCCCAGCTCTTCCCATCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR TCA 72 bp | GATCTGGGTGATCCTGGATGCAGTACTTGGGCTGGGTaGTGGGAAGAGCTGGGGGCAGTACTTGGGCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: DLGDPGCSTWAG*WEELGAVLGQG Trigger: ACCCTGCCCAAGTACTGCCCCCAGCTCTTCCCATCACCCAGCCCAAGTACTGCATCCAGGATCACCCAGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR CCA 72 bp | CTGGGGGCAGTACTTGGGCAGGGTGATGCAAGGAGCTaGATGAGGTACTTGGGCTGGGTGATGGGAAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGAVLGQGDARS*MRYLGWVMGRA Trigger: AGCTCTTCCCATCACCCAGCCCAAGTACCTCATCCAGCTCCTTGCATCACCCTGCCCAAGTACTGCCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR CCA 72 bp | CTGGATGCAGTACTTGGGCTGGGTGATGGGAAGAGCTaGGGGCAGTACTTGGGCAGGGTGATGCAAGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LDAVLGLGDGKS*GQYLGRVMQGA Trigger: AGCTCCTTGCATCACCCTGCCCAAGTACTGCCCCCAGCTCTTCCCATCACCCAGCCCAAGTACTGCATCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR GCA 72 bp | GAGGGAGATATAGGGTGGCCTGCTTGTGAGAAACGCTaGCATGACACTCAGACCCAGACCCAGCCCCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: EGDIGWPACEKR*HDTQTQTQPLQ Trigger: CTGAAGGGGCTGGGTCTGGGTCTGAGTGTCATGGCAGCGTTTCTCACAAGCAGGCCACCCTATATCTCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR CCA 72 bp | CGTTGTCTGGTGAAGCCCGAGGCCCTGGACACCTGCTaGCCTCACAGCCTCAATTTTCATGCTCAATGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RCLVKPEALDTC*PHSLNFHAQWA Trigger: AGCCCATTGAGCATGAAAATTGAGGCTGTGAGGCCAGCAGGTGTCCAGGGCCTCGGGCTTCACCAGACAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR TCA 72 bp | AGACCCGGGAGCCTCCTGTCTCTGCCTCCCTACTGCTaGGATGATGACAAGCACACACTGGCATGTTTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RPGSLLSLPPYC*DDDKHTLACLH Trigger: GTGCAAACATGCCAGTGTGTGCTTGTCATCATCTCAGCAGTAGGGAGGCAGAGACAGGAGGCTCCCGGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR GCA 72 bp | AGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTaGCCAACACCCCATTCGCTTTTTCCAGTCTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RWPLGVSQSTHP*PTPHSLFPVFQ Trigger: TTGGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| 3UTR CCA 72 bp | CTGAGAATGAGAACTCTGGTGCTGCATCAGGCACCCTaGATCTGGGTGATCCTGGATGCAGTACTTGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRMRTLVLHQAP*IWVILDAVLGL Trigger: CAGCCCAAGTACTGCATCCAGGATCACCCAGATCCAGGGTGCCTGATGCAGCACCAGAGTTCTCATTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGGCAGCAAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGAATGCACTTGGGCACTaGGGCTTGAGAGCAAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LRQQGISSGPHACLAKQGNALGH*GLRASV Trigger: CACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCATT...CCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTTGCTGCCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| 3UTR TCA 72 bp | TGTCCTGGGGTAGAGGAAATGAGGCTCAGTCCAGAATaGGACAGGGCTTATAACCAGACCAGTGCCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CPGVEEMRLSPE*DRAYNQTSALP Trigger: AGGCAGGGCACTGGTCTGGTTATAAGCCCTGTCTCATTCTGGACTGAGCCTCATTTCCTCTACCCCAGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR CCA 72 bp | AGACAAAGATCAAACCGTTGCCTTCCTAAGGCCTTATaGAAGACGCTCCAAGCTCTCTGTGACCCTCGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RQRSNRCLPKAL*KTLQALCDPRG Trigger: GCCCCGAGGGTCACAGAGAGCTTGGAGCGTCTTCCATAAGGCCTTAGGAAGGCAACGGTTTGATCTTTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAGGCAGCAAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGAATGCACTTGGGCACTaGGGCTTGAGAGCAAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FKAARDIFWPTCLSGQARNALGH*GLRASV Trigger: CACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCATT...CCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTTGCTGCCTTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| 3UTR TCA 72 bp | TCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTaGGAGCAAGTGTGCCCCACGTCTGATGGCGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SNIILMHLGTWA*EQVCPTSDGVC Trigger: GCAGACGCCATCAGACGTGGGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| 3UTR CCA 72 bp | TGCCTCCCTACTGCTGAGATGATGACAAGCACACACTaGCATGTTTGCACAGCCAAGCTTTCTCTCCAACCC | + |
|
Preference number: 3 (lower is better) Translates to: CLPTAEMMTSTH*HVCTAKLSLQP Trigger: GGGTTGGAGAGAAAGCTTGGCTGTGCAAACATGCCAGTGTGTGCTTGTCATCATCTCAGCAGTAGGGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTAAAGCCTCTTTTAAAACCCACTTGCTGGGCATCAGAGCCCACCAGACAGGAGGGAGACATACACACTaGGCCTTTTGTGTGCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SKASFKTHLLGIRAHQTGGRHTH*AFCVPA Trigger: GGCAGGCACACAAAAGGCCAAGTGTGTATGTCTCCC...TCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTGGGTTTTAAAAGAGGCTTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR TCA 72 bp | TCCCTCCTCGTGACCTGCTTCATTCACTCACAGGGATaGCCTCATTATTCCGTGATTCTGTCAGTGCACGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLLVTCFIHSQG*PHYSVILSVHV Trigger: CACGTGCACTGACAGAATCACGGAATAATGAGGTCATCCCTGTGAGTGAATGAAGCAGGTCACGAGGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR GCA 72 bp | CCTGGACACCTGCTGGCCTCACAGCCTCAATTTTCATaGTCAATGGGCTTTTGCCTCTGTTTAGGGACAACA | + |
|
Preference number: 3 (lower is better) Translates to: PGHLLASQPQFS*SMGFCLCLGTT Trigger: TGTTGTCCCTAAACAGAGGCAAAAGCCCATTGAGCATGAAAATTGAGGCTGTGAGGCCAGCAGGTGTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR CCA 72 bp | TGGAATGAAACAGGGTGGTGGGGAGACATACACACTTaGCCTTTTGTGTGCCTGCCCTCAAGGTATAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: WNETGWWGDIHT*PFVCLPSRYRN Trigger: GTTCCTATACCTTGAGGGCAGGCACACAAAAGGCCAAGTGTGTATGTCTCCCCACCACCCTGTTTCATTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR CCA 72 bp | AAGAGCTCAGTAAAGCCTCTTTTAAAACCCACTTGCTaGGCATCAGAGCCCACCAGACAGGACTTAGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: KSSVKPLLKPTC*ASEPTRQDLEG Trigger: CCCCTCTAAGTCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTGGGTTTTAAAAGAGGCTTTACTGAGCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR TCA 72 bp | TGGCCTTTTGTGTGCCTGCCCTCAAGGTATAGGAACTaGAAAGAACACTGCATTCTAGGGCTGGCTCCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: WPFVCLPSRYRN*KEHCILGLAPN Trigger: ATTGGGAGCCAGCCCTAGAATGCAGTGTTCTTTTCAGTTCCTATACCTTGAGGGCAGGCACACAAAAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR TCA 72 bp | ATCCCAAGTGCACTATGTCCGAGCTATGTGTCTACATaGGTCTTCCCTCCTCGTGACCTGCTTCATTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: IPSALCPSYVST*VFPPRDLLHSL Trigger: GAGTGAATGAAGCAGGTCACGAGGAGGGAAGACTCATGTAGACACATAGCTCGGACATAGTGCACTTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR TCA 72 bp | GTGATGGGAAGAGCTGGATGCAGTACTTGTGCTAAGTaGTGGGAGGAGCTGGATGAGGTACTTGAACTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: VMGRAGCSTCAK*WEELDEVLELS Trigger: ACTCAGTTCAAGTACCTCATCCAGCTCCTCCCATCACTTAGCACAAGTACTGCATCCAGCTCTTCCCATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR TCA 72 bp | GTGACCTGGAGTAGGAAAACAAAGCCAGGTAACCCTTaGTCTGGGAAGTCCCCTCTGAACTCTGAACACTAC | + |
|
Preference number: 3 (lower is better) Translates to: VTWSRKTKPGNP*SGKSPLNSEHY Trigger: GTAGTGTTCAGAGTTCAGAGGGGACTTCCCAGATCAAGGGTTACCTGGCTTTGTTTTCCTACTCCAGGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| 3UTR TCA 72 bp | CTAAAGCAATGTGGCTGGGCACTGCCACTAACTTGGTaGCCTGGAGTAGGAAAACAAAGCCAGGTAACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LKQCGWALPLTW*PGVGKQSQVTL Trigger: AAGGGTTACCTGGCTTTGTTTTCCTACTCCAGGTCACCAAGTTAGTGGCAGTGCCCAGCCACATTGCTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| 3UTR CCA 72 bp | CAGGAGAGACCATGGAAGGGCCTTATAAGAGCCCTGTaGACAGATCACAAGCAGATTCAGAAGTGGCATCTA | + |
|
Preference number: 3 (lower is better) Translates to: QERPWKGLIRAL*TDHKQIQKWHL Trigger: TAGATGCCACTTCTGAATCTGCTTGTGATCTGTCCACAGGGCTCTTATAAGGCCCTTCCATGGTCTCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCTGTGGACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTAGAGAGGGGCACTGCCACTAACTaGGTGACCTGGAGTAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPVDRSQADSEVASKLERGTATN*VTWSRK Trigger: TTTCCTACTCCAGGTCACCAAGTTAGTGGCAGTGCC...CCTCTCTAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTCCACAGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| 3UTR GCA 72 bp | CTCTGGGCTAAGTGCCTAGCAACCCATGGCATCCAATaGCCAAGAACCACATTCCTGCCTTATTTTCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LWAKCLATHGIQ*PRTTFLPYFQR Trigger: TCTTTGAAAATAAGGCAGGAATGTGGTTCTTGGGCATTGGATGCCATGGGTTGCTAGGCACTTAGCCCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR GCA 72 bp | GTTAAGAGCTCAGTAAAGCCTCTTTTAAAACCCACTTaGTGGGCATCAGAGCCCACCAGACAGGACTTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VKSSVKPLLKPT*WASEPTRQDLE Trigger: CTCTAAGTCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTGGGTTTTAAAAGAGGCTTTACTGAGCTCTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR GCA 72 bp | CACACAATGTGTTTTCTCCTATGCTTCTCACACATGTaGTCCCTAAAGCAATGTGGCTGGGCACTGCCACTA | + |
|
Preference number: 3 (lower is better) Translates to: HTMCFLLCFSHM*SLKQCGWALPL Trigger: TAGTGGCAGTGCCCAGCCACATTGCTTTAGGGAGCACATGTGTGAGAAGCATAGGAGAAAACACATTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| 3UTR CCA 72 bp | GTAGGGCCAAATATTCTTTGGAATGAAACAGGGTGGTaGGGAGACATACACACTTGGCCTTTTGTGTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VGPNILWNETGW*GDIHTWPFVCL Trigger: CAGGCACACAAAAGGCCAAGTGTGTATGTCTCCCCACCACCCTGTTTCATTCCAAAGAATATTTGGCCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR GCA 72 bp | ACTGAGTTCTCTGAACTGAGACAAAGATCAAACCGTTaGCTTCCTAAGGCCTTATGGAAGACGCTCCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TEFSELRQRSNR*LPKALWKTLQA Trigger: AGCTTGGAGCGTCTTCCATAAGGCCTTAGGAAGGCAACGGTTTGATCTTTGTCTCAGTTCAGAGAACTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR-3UTR CAA 90 bp | TATAAGAGCCCTGTGGACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTACCTGCAAAAGCAACCTaGGAGGGTACAGGGTCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: YKSPVDRSQADSEVASKLPAKAT*EGTGSV Trigger: AACTGACCCTGTACCCTCCAAGGTTGCTTTTGCAGG...TAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTCCACAGGGCTCTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| 3UTR TCA 72 bp | CCCTCAACAGGACATTTCGCCTTGTCTCCTCTGGCCTaGGTCTTTCATTCCTATAAGCTATTGATTCATACG | + |
|
Preference number: 3 (lower is better) Translates to: PSTGHFALSPLA*VFHSYKLLIHT Trigger: CGTATGAATCAATAGCTTATAGGAATGAAAGACTCAGGCCAGAGGAGACAAGGCGAAATGTCCTGTTGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| 3UTR TCA 72 bp | AACCTATTGCTCTGTATGCTAACTTTAAAACTTAACTaGGCTGGCCAGTGGTGGTGCACACCTTTAATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: NLLLCMLTLKLN*AGQWWCTPLIP Trigger: TGGGATTAAAGGTGTGCACCACCACTGGCCAGCTCAGTTAAGTTTTAAAGTTAGCATACAGAGCAATAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| 3UTR TCA 72 bp | GTTCCGAAATCTAGCAAATATTGCCAGAAGTATATATaGTACGGATCTGATACATCCTTCCCCTGGCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: VPKSSKYCQKYI*YGSDTSFPWPQ Trigger: TTGTGGCCAGGGGAAGGATGTATCAGATCCGTATCATATATACTTCTGGCAATATTTGCTAGATTTCGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| 3UTR CCA 72 bp | TCTTACAGCGAACATCTCACAGGTTGTATATTGTCCTaGACATTTCTACAAATGATCCTGGTTAATCTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: SYSEHLTGCILS*TFLQMILVNLL Trigger: TAGGAGATTAACCAGGATCATTTGTAGAAATGTCCAGGACAATATACAACCTGTGAGATGTTCGCTGTAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR CCA 90 bp | GGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCGGAGGGGCCCTGGGCTaGGGTCTTGAGTGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GERWPLGVSQSTHPCPTPGGALG*GLEWSA Trigger: TGCAGACCACTCAAGACCCCAGCCCAGGGCCCCTCC...GGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGGAAAGGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCTTGGGAGGGGCCCTaGGCTGGGGTCTTGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGKGERWPLGVSQSTHPCPWEGP*AGVLSG Trigger: ACCACTCAAGACCCCAGCCCAGGGCCCCTCCCAAGG...GCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCCTTTCCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | AGGGAAAGGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCCTGCACCTTCCCGTGTaGCACAGAGGGGCACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RERGKVAVGSQPEHTSLPLHLPV*HRGALG Trigger: CCCAAGTGCCCCTCTGTGTCACACGGGAAGGTGCAG...GGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCCTTTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGGAAAGGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCACCGCCTCGCACCTaGGGCCAGGAACAGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGKGERWPLGVSQSTHPCPPPRT*GQEQLV Trigger: TACAAGCTGTTCCTGGCCCCAGGTGCGAGGCGGTGG...GCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCCTTTCCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | GGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCGCTCTCTGTTCTCAGTaGCTGAGGGCCCAGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GERWPLGVSQSTHPCPTPALCSQ*LRAQSW Trigger: CCAACTCTGGGCCCTCAGTCACTGAGAACAGAGAGC...GGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR GCA 90 bp | GGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCATCCTCGGCCTGTACTaGTGGCCTTGGTGTCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GERWPLGVSQSTHPCPTPILGLY*WPWCRI Trigger: GATCCGACACCAAGGCCAGCAGTACAGGCCGAGGAT...GGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR GCA 90 bp | GCAGGGAAAGGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCCGTCTCAGGAACCTaGCAAGGGACAGAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGKGERWPLGVSQSTHPCPVSGT*QGTELH Trigger: GTGCAGCTCTGTCCCTTGGCAGGTTCCTGAGACGGG...GCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCCTTTCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCTGGCCACTGCTGCGTaGGCCAGAAATATGGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GERWPLGVSQSTHPCPTPLATAA*ARNMAS Trigger: AGACGCCATATTTCTGGCCCACGCAGCAGTGGCCAG...GGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR CCA 90 bp | AGGGAAAGGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCAAGCAAAGGGCTTCCTaGGGGAGCGGCAGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RERGKVAVGSQPEHTSLPKQRAS*GSGRMV Trigger: CACCATCCTGCCGCTCCCCCAGGAAGCCCTTTGCTT...GGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCCTTTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | TGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCCACGTCTGATGGCGTCTGGAGGGGCCCTGGGCTaGGGTCTTGAGTGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CTWALGLESKCAPRLMASGGALG*GLEWSA Trigger: TGCAGACCACTCAAGACCCCAGCCCAGGGCCCCTCC...AGACGCCATCAGACGTGGGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | TGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCCACGTCTGATGGCGTCTGGAGCGGCAGGATGGTaGGAAGGGACTGGAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CTWALGLESKCAPRLMASGAAGW*EGTGGR Trigger: TCTCCCTCCAGTCCCTTCTCACCATCCTGCCGCTCC...AGACGCCATCAGACGTGGGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCTCTTGGTGGTTTCCTaGGGCTCGATAGCTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GERWPLGVSQSTHPCPTPLLVVS*GSIALA Trigger: GGCCAAAGCTATCGAGCCCCAGGAAACCACCAAGAG...GGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | TGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCCACGTCTGATGGCGTCTGGGCTGGAGCGTAGGTaGCGCCTCATAAATGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CTWALGLESKCAPRLMASGLERR*RLINGR Trigger: CCTCCCATTTATGAGGCGTCACCTACGCTCCAGCCC...AGACGCCATCAGACGTGGGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | TGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGCTGGGAGCCAAGTGCTaGCCTGGCTGGGTGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WESARAHIPAQHPIRFFQLGAKC*PGWVMS Trigger: GGACATCACCCAGCCAGGTCAGCACTTGGCTCCCAG...CTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR GCA 90 bp | TGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCCACGTCTGATGGCGTCTCCCGTCTCAGGAACCTaGCAAGGGACAGAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CTWALGLESKCAPRLMASPVSGT*QGTELH Trigger: GTGCAGCTCTGTCCCTTGGCAGGTTCCTGAGACGGG...AGACGCCATCAGACGTGGGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | TGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGCCACCGCCTCGCACCTaGGGCCAGGAACAGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: WESARAHIPAQHPIRFFQPPPRT*GQEQLV Trigger: TACAAGCTGTTCCTGGCCCCAGGTGCGAGGCGGTGG...CTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | TTTAAGGCAGCAAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGTGGGCGAGGGGCAGATaGCAATGCTGGGCCGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FKAARDIFWPTCLSGQARWARGR*QCWAAG Trigger: TCCGGCGGCCCAGCATTGCCATCTGCCCCTCGCCCA...CCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTTGCTGCCTTAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCTGGCGCCAGACCAGCTaGCTTCCCCCTTGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSQSTHPCPTPHSLFPVFWRQTS*LPPWAP Trigger: TGGAGCCCAAGGGGGAAGCCAGCTGGTCTGGCGCCA...GAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCATGGCGCCAGACCAGCTaGCTTCCCCCTTGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPEHTSLPNTPFAFSSLPWRQTS*LPPWAP Trigger: TGGAGCCCAAGGGGGAAGCCAGCTGGTCTGGCGCCA...TGGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | GCCTCCTGTCTCTGCCTCCCTACTGCTGAGATGATGACAAGCACACACTGGCATCCTCCTGTCATGGCGTaGGGGACACTGGTGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASCLCLPTAEMMTSTHWHPPVMA*GTLVTR Trigger: CCTGGTCACCAGTGTCCCTCACGCCATGACAGGAGG...ATGCCAGTGTGTGCTTGTCATCATCTCAGCAGTAGGGAGGCAGAGACAGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR TCA 90 bp | ACCTTGTCGGACCTCAAGGCATGGAATGAGCTGCCCCTGAGTGCTGAGATAGCACCTCCTGTCATGGCGTaGGGGACACTGGTGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLSDLKAWNELPLSAEIAPPVMA*GTLVTR Trigger: CCTGGTCACCAGTGTCCCTCACGCCATGACAGGAGG...TGCTATCTCAGCACTCAGGGGCAGCTCATTCCATGCCTTGAGGTCCGACAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGGGGCTGGAGCGTAGGTaGCGCCTCATAAATGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WESARAHIPAQHPIRFFQGLERR*RLINGR Trigger: CCTCCCATTTATGAGGCGTCACCTACGCTCCAGCCC...CTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | TGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGGTATACACGGCCAGGTaGGGACTGGGAGCCAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WESARAHIPAQHPIRFFQVYTAR*GLGAKC Trigger: GCACTTGGCTCCCAGTCCTCACCTGGCCGTGTATAC...CTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | AAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGAAAGGCAGGGGTATACACGGCCAGGTaGGGACTGGGAGCCAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGYLLAHMPVWPSKGKAGVYTAR*GLGAKC Trigger: GCACTTGGCTCCCAGTCCTCACCTGGCCGTGTATAC...CCCTGCCTTTCCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | CAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCAGGAGCGGCAGGATGGTaGGAAGGGACTGGAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QPEHTSLPNTPFAFSSLPGAAGW*EGTGGR Trigger: TCTCCCTCCAGTCCCTTCTCACCATCCTGCCGCTCC...TGGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | TTAAGGCAGCAAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGCTGCACCTTCCCGTGTaGCACAGAGGGGCACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRQQGISSGPHACLAKQGLHLPV*HRGALG Trigger: CCCAAGTGCCCCTCTGTGTCACACGGGAAGGTGCAG...CCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTTGCTGCCTTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCGTGACGCCTCATAAATaGGAGGGTGGAGCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GERWPLGVSQSTHPCPTPVTPHK*EGGASL Trigger: AAGAGAAGCTCCACCCTCCCATTTATGAGGCGTCAC...GGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCACCAAAGCCACTCGGCTaGGCGAGGGGCAGATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPEHTSLPNTPFAFSSLPPKPLG*ARGRWQ Trigger: TTGCCATCTGCCCCTCGCCCAGCCGAGTGGCTTTGG...TGGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCCAAAGCCACTCGGCTaGGCGAGGGGCAGATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSQSTHPCPTPHSLFPVFPKPLG*ARGRWQ Trigger: TTGCCATCTGCCCCTCGCCCAGCCGAGTGGCTTTGG...GAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCACTTGGGTGAGAGCCTaGCAAAAACTGGTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GERWPLGVSQSTHPCPTPTWVRA*QKLVMP Trigger: TGGCATCACCAGTTTTTGCCAGGCTCTCACCCAAGT...GGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGGAAAGGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCACACAGAGGGGCACTTaGGTGAGAGCCTGGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AGKGERWPLGVSQSTHPCTQRGT*VRAWQK Trigger: TTTTTGCCAGGCTCTCACCCAAGTGCCCCTCTGTGT...GCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCCTTTCCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | ACCCAGACCCAGCCCCTTCAGCACAGGAGATGTGGTGAGCACTGTGCTGCTGGGTCTGGTTATGCATTCTaGCTCCCGTCTCTGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQTQPLQHRRCGEHCAAGSGYAF*LPSLGS Trigger: AGAACCCAGAGACGGGAGTCAGAATGCATAACCAGA...CCCAGCAGCACAGTGCTCACCACATCTCCTGTGCTGAAGGGGCTGGGTCTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR TCA 90 bp | ACCTTGTCGGACCTCAAGGCATGGAATGAGCTGCCCCTGAGTGCTGAGATAGCAGGGCTGGAGCGTAGGTaGCGCCTCATAAATGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLSDLKAWNELPLSAEIAGLERR*RLINGR Trigger: CCTCCCATTTATGAGGCGTCACCTACGCTCCAGCCC...TGCTATCTCAGCACTCAGGGGCAGCTCATTCCATGCCTTGAGGTCCGACAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR TCA 90 bp | GTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCTCTGTTCTCAGTGACTaGGGGCCCAGAGTTGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSQSTHPCPTPHSLFPVFSVLSD*GPRVGA Trigger: GGCGCCAACTCTGGGCCCTCAGTCACTGAGAACAGA...GAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR GCA 90 bp | TGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCCACGTCTGATGGCGTCTAAGTACTGGAAGCTCTaGCGACCCTTGGGGTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CTWALGLESKCAPRLMASKYWKL*RPLGSR Trigger: TCGAGACCCCAAGGGTCGGCAGAGCTTCCAGTACTT...AGACGCCATCAGACGTGGGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAAAGGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCCGTGGGCCAGAAATATaGCGTCTGAAATCGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RERGKVAVGSQPEHTSLPRGPEI*RLKSVE Trigger: CTCTACCGATTTCAGACGCCATATTTCTGGCCCACG...GGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCCTTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR CCA 90 bp | GGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCCGAAGACTTCACTGTaGACCTCATTAAGGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GERWPLGVSQSTHPCPTPPKTSL*TSLRPV Trigger: AACAGGCCTTAATGAGGTCCACAGTGAAGTCTTCGG...GGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCTCTCCACTCGCATCTTaGTTGGGATCTCCACCAATT | + |
|
Preference number: 4 (lower is better) Translates to: GERWPLGVSQSTHPCPTPSPLAS*LGSPPI Trigger: AATTGGTGGAGATCCCAACCAAGATGCGAGTGGAGA...GGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | TGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCCACGTCTGATGGCGTCTCAGACTCTCCTGCTCTaGGGTCATCCGAGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CTWALGLESKCAPRLMASQTLLL*GHPSPS Trigger: TGATGGACTCGGATGACCCCAGAGCAGGAGAGTCTG...AGACGCCATCAGACGTGGGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | AAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGAAAGGCAGGGCCTCTGCTTTCTCCTTaGCCTTGGACTGATCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KGYLLAHMPVWPSKGKAGPLLSP*PWTDRR Trigger: ACGGCGATCAGTCCAAGGTCAAGGAGAAAGCAGAGG...CCCTGCCTTTCCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | TATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCCACGTCCTGGGAGCCAAGTGCTaGCCTGGCTGGGTGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YYPNALGHLGLRASVPHVLGAKC*PGWVMS Trigger: GGACATCACCCAGCCAGGTCAGCACTTGGCTCCCAG...GACGTGGGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | GATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGAAAGGCAGGGAAAGGCTCTCTGTTCTCAGTaGCTGAGGGCCCAGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DIFWPTCLSGQARERQGKALCSQ*LRAQSW Trigger: CCAACTCTGGGCCCTCAGTCACTGAGAACAGAGAGC...CTTTCCCTGCCTTTCCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | GAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTAGAGGGGCACTTGGGTaGGAGCCTGGCAAAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESARAHIPAQHPIRFFQSRGALG*EPGKNW Trigger: CCAGTTTTTGCCAGGCTCTCACCCAAGTGCCCCTCT...AGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR GCA 90 bp | ACCTTGTCGGACCTCAAGGCATGGAATGAGCTGCCCCTGAGTGCTGAGATAGCAATCCTCGGCCTGTACTaGTGGCCTTGGTGTCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TLSDLKAWNELPLSAEIAILGLY*WPWCRI Trigger: GATCCGACACCAAGGCCAGCAGTACAGGCCGAGGAT...TGCTATCTCAGCACTCAGGGGCAGCTCATTCCATGCCTTGAGGTCCGACAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAAGGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCAGGACTCTCTGGTTATaGATTCTGACTCCCGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RERGKVAVGSQPEHTSLPRTLWL*ILTPVS Trigger: AGAGACGGGAGTCAGAATGCATAACCAGAGAGTCCT...GGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCCTTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCATCAGCTGGCCACTGCTaGGTGGGCCAGAAATATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPEHTSLPNTPFAFSSLPSAGHC*VGQKYG Trigger: GCCATATTTCTGGCCCACGCAGCAGTGGCCAGCTGA...TGGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCAATGTCCCCCAGAGGCTaGACCTTCCCGTGTGACACA | + |
|
Preference number: 4 (lower is better) Translates to: QPEHTSLPNTPFAFSSLPMSPRG*TFPCDT Trigger: TGTGTCACACGGGAAGGTGCAGCCTCTGGGGGACAT...TGGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGAAAGGCAGGGCTCTTGGTGGTTTCCTaGGGCTCGATAGCTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGYLLAHMPVWPSKGKAGLLVVS*GSIALA Trigger: GGCCAAAGCTATCGAGCCCCAGGAAACCACCAAGAG...CCCTGCCTTTCCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | TGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTGGGTTTCAGCCTaGGCAGCTGTTGGCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: WESARAHIPAQHPIRFFQSWVSA*AAVGPC Trigger: ACATGGGCCAACAGCTGCCCAGGCTGAAACCCAAGA...CTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| 3UTR CAA 72 bp | CTTGGGCAGGGTGATGCAAGGAGCTGGATGAGGTACTaGGGCTGGGTGATGGGAAGAGCTGGATGCAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LGQGDARSWMRY*GWVMGRAGCST Trigger: AGTACTGCATCCAGCTCTTCCCATCACCCAGCCCAAGTACCTCATCCAGCTCCTTGCATCACCCTGCCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR TCA 90 bp | TGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCCACGTCTGATGGCGTCTTCTGGTTATGCATTCTaGCTCCCGTCTCTGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CTWALGLESKCAPRLMASSGYAF*LPSLGS Trigger: AGAACCCAGAGACGGGAGTCAGAATGCATAACCAGA...AGACGCCATCAGACGTGGGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR TCA 90 bp | CAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCACGTGAGGGACACTGGTaGCCAGGACTCTCTGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QPEHTSLPNTPFAFSSLPREGHW*PGLSGY Trigger: ATAACCAGAGAGTCCTGGTCACCAGTGTCCCTCACG...TGGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR TCA 90 bp | GAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTCCTGGCAAAAACTGGTaGTGCCAAACAGCCCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESARAHIPAQHPIRFFQSPGKNW*CQTAPS Trigger: AGACGGGGCTGTTTGGCATCACCAGTTTTTGCCAGG...AGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR GCA 90 bp | AAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGAAAGGCAGGGGTTGCCCAGGTTCTGTaGCTCCAGGTTAGAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGYLLAHMPVWPSKGKAGVAQVL*LQVRDP Trigger: TGGATCTCTAACCTGGAGGCACAGAACCTGGGCAAC...CCCTGCCTTTCCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR GCA 90 bp | TTAAGGCAGCAAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGAAGTACTGGAAGCTCTaGCGACCCTTGGGGTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LRQQGISSGPHACLAKQGKYWKL*RPLGSR Trigger: TCGAGACCCCAAGGGTCGGCAGAGCTTCCAGTACTT...CCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTTGCTGCCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | TTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCCCTTGGGAGGGGCCCTaGGCTGGGGTCTTGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FQYYPNALGHLGLRASVPPWEGP*AGVLSG Trigger: ACCACTCAAGACCCCAGCCCAGGGCCCCTCCCAAGG...GGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCAGACTCTCCTGCTCTaGGGTCATCCGAGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VSQSTHPCPTPHSLFPVFQTLLL*GHPSPS Trigger: TGATGGACTCGGATGACCCCAGAGCAGGAGAGTCTG...GAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | TTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCCCTCCTGTCATGGCGTaGGGGACACTGGTGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FQYYPNALGHLGLRASVPPPVMA*GTLVTR Trigger: CCTGGTCACCAGTGTCCCTCACGCCATGACAGGAGG...GGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR TCA 90 bp | TTTAAGGCAGCAAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGCCTGGCAAAAACTGGTaGTGCCAAACAGCCCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FKAARDIFWPTCLSGQARPGKNW*CQTAPS Trigger: AGACGGGGCTGTTTGGCATCACCAGTTTTTGCCAGG...CCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTTGCTGCCTTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR GCA 90 bp | CACTTGCTGGGCATCAGAGCCCACCAGACAGGACTTAGAGGGGGTTTAGATGGTGTTGCCCAGGTTCTGTaGCTCCAGGTTAGAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLLGIRAHQTGLRGGLDGVAQVL*LQVRDP Trigger: TGGATCTCTAACCTGGAGGCACAGAACCTGGGCAAC...ACCATCTAAACCCCCTCTAAGTCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR GCA 90 bp | GATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGAAAGGCAGGGAAAGTCTTCAGCTGGCCACTaGTGCGTGGGCCAGAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: DIFWPTCLSGQARERQGKSSAGH*CVGQKY Trigger: ATATTTCTGGCCCACGCAGCAGTGGCCAGCTGAAGA...CTTTCCCTGCCTTTCCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR GCA 90 bp | TTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAAATGTGGGTCTGCGCTaGATCCAGTACATAGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGVSQSTHPCPTPHSLFPNVGLR*IQYIAV Trigger: CACCGCTATGTACTGGATGCAGCGCAGACCCACATT...TGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | TTAAGGCAGCAAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGTCTGACTCCCGTCTCTaGGTTCTGCATGTCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRQQGISSGPHACLAKQGSDSRL*VLHVLH Trigger: GTGAAGGACATGCAGAACCCAGAGACGGGAGTCAGA...CCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTTGCTGCCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR CCA 90 bp | GGGGAGACATACACACTTGGCCTTTTGTGTGCCTGCCCTCAAGGTATAGGAACTCTGGCCACTGCTGCGTaGGCCAGAAATATGGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GETYTLGLLCACPQGIGTLATAA*ARNMAS Trigger: AGACGCCATATTTCTGGCCCACGCAGCAGTGGCCAG...AGTTCCTATACCTTGAGGGCAGGCACACAAAAGGCCAAGTGTGTATGTCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR CCA 90 bp | TCGCTTTTTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGTGGGCGAGGGGCAGATaGCAATGCTGGGCCGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLFPVFQYYPNALGHLGLWARGR*QCWAAG Trigger: TCCGGCGGCCCAGCATTGCCATCTGCCCCTCGCCCA...CAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAAAAAGCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGAAAGGCAGGGACTTGGGTGAGAGCCTaGCAAAAACTGGTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGYLLAHMPVWPSKGKAGTWVRA*QKLVMP Trigger: TGGCATCACCAGTTTTTGCCAGGCTCTCACCCAAGT...CCCTGCCTTTCCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTACACAGAGGGGCACTTaGGTGAGAGCCTGGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ESARAHIPAQHPIRFFQSTQRGT*VRAWQK Trigger: TTTTTGCCAGGCTCTCACCCAAGTGCCCCTCTGTGT...AGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | TGGAATGAAACAGGGTGGTGGGGAGACATACACACTTGGCCTTTTGTGTGCCTGCGTGAGGGACACTGGTaGCCAGGACTCTCTGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: WNETGWWGDIHTWPFVCLREGHW*PGLSGY Trigger: ATAACCAGAGAGTCCTGGTCACCAGTGTCCCTCACG...CAGGCACACAAAAGGCCAAGTGTGTATGTCTCCCCACCACCCTGTTTCATTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR TCA 90 bp | TTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCATCTCCCAGGGGCAGATaGCTTCTTTTTCTGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGVSQSTHPCPTPHSLFPSPRGR*LLFLWS Trigger: AGACCACAGAAAAAGAAGTCATCTGCCCCTGGGAGA...TGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR GCA 90 bp | AGTAAAGCCTCTTTTAAAACCCACTTGCTGGGCATCAGAGCCCACCAGACAGGAATCCTCGGCCTGTACTaGTGGCCTTGGTGTCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SKASFKTHLLGIRAHQTGILGLY*WPWCRI Trigger: GATCCGACACCAAGGCCAGCAGTACAGGCCGAGGAT...TCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTGGGTTTTAAAAGAGGCTTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR GCA 90 bp | TTTAAGGCAGCAAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGAATGTGGGTCTGCGCTaGATCCAGTACATAGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FKAARDIFWPTCLSGQARNVGLR*IQYIAV Trigger: CACCGCTATGTACTGGATGCAGCGCAGACCCACATT...CCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTTGCTGCCTTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | CACTTGCTGGGCATCAGAGCCCACCAGACAGGACTTAGAGGGGGTTTAGATGGTGTGACCAGGACTCTCTaGTTATGCATTCTGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HLLGIRAHQTGLRGGLDGVTRTL*LCILTP Trigger: GGGAGTCAGAATGCATAACCAGAGAGTCCTGGTCAC...ACCATCTAAACCCCCTCTAAGTCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR GCA 90 bp | AACAGGGTGGTGGGGAGACATACACACTTGGCCTTTTGTGTGCCTGCCCTCAAGAGGACTCTCTGGTTATaGATTCTGACTCCCGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRVVGRHTHLAFCVPALKRTLWL*ILTPVS Trigger: AGAGACGGGAGTCAGAATGCATAACCAGAGAGTCCT...CTTGAGGGCAGGCACACAAAAGGCCAAGTGTGTATGTCTCCCCACCACCCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR GCA 90 bp | AAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGAAAGGCAGGGCTTGTAGATCTCCTCTaGTTTCTCCTTGACCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGYLLAHMPVWPSKGKAGLVDLL*FLLDLG Trigger: TCCAAGGTCAAGGAGAAAGCAGAGGAGATCTACAAG...CCCTGCCTTTCCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR GCA 90 bp | CACTTGCTGGGCATCAGAGCCCACCAGACAGGACTTAGAGGGGGTTTAGATGGTCCACAATGGTCAGTGTaGACACACAGGAGAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLLGIRAHQTGLRGGLDGPQWSV*THRRKR Trigger: TCTCTTTCTCCTGTGTGTGCACACTGACCATTGTGG...ACCATCTAAACCCCCTCTAAGTCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR CCA 90 bp | TGGTGGGGAGACATACACACTTGGCCTTTTGTGTGCCTGCCCTCAAGGTATAGGCGTGGGCCAGAAATATaGCGTCTGAAATCGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WWGDIHTWPFVCLPSRYRRGPEI*RLKSVE Trigger: CTCTACCGATTTCAGACGCCATATTTCTGGCCCACG...CCTATACCTTGAGGGCAGGCACACAAAAGGCCAAGTGTGTATGTCTCCCCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR CCA 90 bp | TTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCATTCTTGAGAAAGTACTaGAAGCTCTGCCGACCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGVSQSTHPCPTPHSLFPFLRKY*KLCRPL Trigger: CAAGGGTCGGCAGAGCTTCCAGTACTTTCTCAAGAA...TGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | ACACGCTCCTGCAAAAGCAACCTTGGAGGGTACAGGGTCAGTTTCTTGATAAGGCTCTTGGTGGTTTCCTaGGGCTCGATAGCTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TRSCKSNLGGYRVSFLIRLLVVS*GSIALA Trigger: GGCCAAAGCTATCGAGCCCCAGGAAACCACCAAGAG...CCTTATCAAGAAACTGACCCTGTACCCTCCAAGGTTGCTTTTGCAGGAGCGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR TCA 90 bp | TCGCTTTTTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGTCTGTTCTCAGTGACTaGGGGCCCAGAGTTGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLFPVFQYYPNALGHLGLSVLSD*GPRVGA Trigger: GGCGCCAACTCTGGGCCCTCAGTCACTGAGAACAGA...CAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAAAAAGCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | GACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTAGAGAGGTGGGGTGAGGAGGCAGCTCCTTTTTaGGTTGGCTCCTGCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DRSQADSEVASKLERWGEEAAPF*VGSCGP Trigger: TGGACCGCAGGAGCCAACTCAAAAAGGAGCTGCCTC...CTCACCCCACCTCTCTAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGATGTCCCCCAGAGGCTaGACCTTCCCGTGTGACACA | + |
|
Preference number: 4 (lower is better) Translates to: VFQYYPNALGHLGLRASVMSPRG*TFPCDT Trigger: TGTGTCACACGGGAAGGTGCAGCCTCTGGGGGACAT...CACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCTGTGGACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTAGAGAGGCTGGCCACTGCTGCGTaGGCCAGAAATATGGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPVDRSQADSEVASKLERLATAA*ARNMAS Trigger: AGACGCCATATTTCTGGCCCACGCAGCAGTGGCCAG...CCTCTCTAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTCCACAGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAGGCAGCAAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGTTCTTGAGAAAGTACTaGAAGCTCTGCCGACCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FKAARDIFWPTCLSGQARFLRKY*KLCRPL Trigger: CAAGGGTCGGCAGAGCTTCCAGTACTTTCTCAAGAA...CCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTTGCTGCCTTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | TCGCTTTTTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAAGCAAAGGGCTTCCTaGGGGAGCGGCAGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLFPVFQYYPNALGHLGLKQRAS*GSGRMV Trigger: CACCATCCTGCCGCTCCCCCAGGAAGCCCTTTGCTT...CAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAAAAAGCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | ACACGCTCCTGCAAAAGCAACCTTGGAGGGTACAGGGTCAGTTTCTTGATAAGGAGCTCCTTTTTGAGTTaGCTCCTGCGGTCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRSCKSNLGGYRVSFLIRSSFLS*LLRSSL Trigger: CAAGCTGGACCGCAGGAGCCAACTCAAAAAGGAGCT...CCTTATCAAGAAACTGACCCTGTACCCTCCAAGGTTGCTTTTGCAGGAGCGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCTCTGCTTTCTCCTTaGCCTTGGACTGATCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VFQYYPNALGHLGLRASVPLLSP*PWTDRR Trigger: ACGGCGATCAGTCCAAGGTCAAGGAGAAAGCAGAGG...CACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | AGTAAAGCCTCTTTTAAAACCCACTTGCTGGGCATCAGAGCCCACCAGACAGGAAGGGCTTCGATCTTTTaGAGAAATGCCATCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKASFKTHLLGIRAHQTGRASIF*RNAILG Trigger: GCCGAGGATGGCATTTCTCCAAAAGATCGAAGCCCT...TCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTGGGTTTTAAAAGAGGCTTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR CCA 90 bp | TGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGGGATCTCCACCAATTTaGCATTTAAATCCCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: WESARAHIPAQHPIRFFQGSPPI*HLNPRT Trigger: AGTTCTGGGATTTAAATGCCAAATTGGTGGAGATCC...CTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | GATAAGGTAGCACACAATGTGTTTTCTCCTATGCTTCTCACACATGTGCTCCCTCCTCTGCTTTCTCCTTaGCCTTGGACTGATCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: DKVAHNVFSPMLLTHVLPPLLSP*PWTDRR Trigger: ACGGCGATCAGTCCAAGGTCAAGGAGAAAGCAGAGG...AGGGAGCACATGTGTGAGAAGCATAGGAGAAAACACATTGTGTGCTACCTTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCAAAGAATCCTTCTTCATaGGCATGTAAATGTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPEHTSLPNTPFAFSSLPKNPSS*ACKCGS Trigger: AGACCCACATTTACATGCTCATGAAGAAGGATTCTT...TGGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAAGAGGGGCACTTGGGTaGGAGCCTGGCAAAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFPVFQYYPNALGHLGLRRGALG*EPGKNW Trigger: CCAGTTTTTGCCAGGCTCTCACCCAAGTGCCCCTCT...TCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTAACAGCTACTCTTACAGCGAACATCTCACAGGTTGTATATTGTCCTGGATCAGCTGGCCACTGCTaGGTGGGCCAGAAATATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVTATLTANISQVVYCPGSAGHC*VGQKYG Trigger: GCCATATTTCTGGCCCACGCAGCAGTGGCCAGCTGA...TCCAGGACAATATACAACCTGTGAGATGTTCGCTGTAAGAGTAGCTGTTACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR GCA 90 bp | ATGTGTTTTCTCCTATGCTTCTCACACATGTGCTCCCTAAAGCAATGTGGCTGGAATGTGGGTCTGCGCTaGATCCAGTACATAGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MCFLLCFSHMCSLKQCGWNVGLR*IQYIAV Trigger: CACCGCTATGTACTGGATGCAGCGCAGACCCACATT...CCAGCCACATTGCTTTAGGGAGCACATGTGTGAGAAGCATAGGAGAAAACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCAGGGCTTCGATCTTTTaGAGAAATGCCATCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQYYPNALGHLGLRASVPRASIF*RNAILG Trigger: GCCGAGGATGGCATTTCTCCAAAAGATCGAAGCCCT...GGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR CCA 90 bp | ACACGCTCCTGCAAAAGCAACCTTGGAGGGTACAGGGTCAGTTTCTTGATAAGGTTCTTGAGAAAGTACTaGAAGCTCTGCCGACCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRSCKSNLGGYRVSFLIRFLRKY*KLCRPL Trigger: CAAGGGTCGGCAGAGCTTCCAGTACTTTCTCAAGAA...CCTTATCAAGAAACTGACCCTGTACCCTCCAAGGTTGCTTTTGCAGGAGCGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTTCTTGATAAGGTAGCACACAATGTGTTTTCTCCTATGCTTCTCACACATCCACCGCCTCGCACCTaGGGCCAGGAACAGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QFLDKVAHNVFSPMLLTHPPPRT*GQEQLV Trigger: TACAAGCTGTTCCTGGCCCCAGGTGCGAGGCGGTGG...ATGTGTGAGAAGCATAGGAGAAAACACATTGTGTGCTACCTTATCAAGAAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CCA 90 bp | TCGCTTTTTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGTCTTGGGTTTCAGCCTaGGCAGCTGTTGGCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SLFPVFQYYPNALGHLGLSWVSA*AAVGPC Trigger: ACATGGGCCAACAGCTGCCCAGGCTGAAACCCAAGA...CAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAAAAAGCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | GACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTAGAGAGGTGGGGTGAGTCTGGTTATGCATTCTaGCTCCCGTCTCTGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DRSQADSEVASKLERWGESGYAF*LPSLGS Trigger: AGAACCCAGAGACGGGAGTCAGAATGCATAACCAGA...CTCACCCCACCTCTCTAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR GCA 90 bp | GATAAGGTAGCACACAATGTGTTTTCTCCTATGCTTCTCACACATGTGCTCCCTTCTTCAGCTGGCCACTaGTGCGTGGGCCAGAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: DKVAHNVFSPMLLTHVLPSSAGH*CVGQKY Trigger: ATATTTCTGGCCCACGCAGCAGTGGCCAGCTGAAGA...AGGGAGCACATGTGTGAGAAGCATAGGAGAAAACACATTGTGTGCTACCTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGAGATTTCAAATAGCGTaGGTAAGAATCCTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WESARAHIPAQHPIRFFQRFQIA*VRILLH Trigger: ATGAAGAAGGATTCTTACGCACGCTATTTGAAATCT...CTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR GCA 90 bp | ATGTGTTTTCTCCTATGCTTCTCACACATGTGCTCCCTAAAGCAATGTGGCTGGTCTTCTTCTTCCAGCTaGCGCAGAATGACAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MCFLLCFSHMCSLKQCGWSSSSS*RRMTGL Trigger: AAGCCCTGTCATTCTGCGGCAGCTGGAAGAAGAAGA...CCAGCCACATTGCTTTAGGGAGCACATGTGTGAGAAGCATAGGAGAAAACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCTGTGGACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTAGAGAGGGTGACCAGGACTCTCTaGTTATGCATTCTGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPVDRSQADSEVASKLERVTRTL*LCILTP Trigger: GGGAGTCAGAATGCATAACCAGAGAGTCCTGGTCAC...CCTCTCTAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTCCACAGGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCTGTGGACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTAGAGAGGCGTGGGCCAGAAATATaGCGTCTGAAATCGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPVDRSQADSEVASKLERRGPEI*RLKSVE Trigger: CTCTACCGATTTCAGACGCCATATTTCTGGCCCACG...CCTCTCTAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTCCACAGGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCTCTCCACTCGCATCTTaGTTGGGATCTCCACCAATT | + |
|
Preference number: 4 (lower is better) Translates to: FQYYPNALGHLGLRASVPSPLAS*LGSPPI Trigger: AATTGGTGGAGATCCCAACCAAGATGCGAGTGGAGA...GGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | TCGCTTTTTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGTCTCCCAGGGGCAGATaGCTTCTTTTTCTGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLFPVFQYYPNALGHLGLSPRGR*LLFLWS Trigger: AGACCACAGAAAAAGAAGTCATCTGCCCCTGGGAGA...CAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAAAAAGCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTTCTTGATAAGGTAGCACACAATGTGTTTTCTCCTATGCTTCTCACACATTCAGCTGGCCACTGCTaGGTGGGCCAGAAATATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QFLDKVAHNVFSPMLLTHSAGHC*VGQKYG Trigger: GCCATATTTCTGGCCCACGCAGCAGTGGCCAGCTGA...ATGTGTGAGAAGCATAGGAGAAAACACATTGTGTGCTACCTTATCAAGAAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCCTTGTAGATCTCCTCTaGTTTCTCCTTGACCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FQYYPNALGHLGLRASVPLVDLL*FLLDLG Trigger: TCCAAGGTCAAGGAGAAAGCAGAGGAGATCTACAAG...GGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR GCA 90 bp | TTTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGCATCTTCTTCTTCCAGCTaGCGCAGAATGACAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FPVFQYYPNALGHLGLRASSSSS*RRMTGL Trigger: AAGCCCTGTCATTCTGCGGCAGCTGGAAGAAGAAGA...TGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | GATAAGGTAGCACACAATGTGTTTTCTCCTATGCTTCTCACACATGTGCTCCCTAGGGCTTCGATCTTTTaGAGAAATGCCATCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: DKVAHNVFSPMLLTHVLPRASIF*RNAILG Trigger: GCCGAGGATGGCATTTCTCCAAAAGATCGAAGCCCT...AGGGAGCACATGTGTGAGAAGCATAGGAGAAAACACATTGTGTGCTACCTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCAACCTTGGAGGGTACAGGGTCAGTTTCTTGATAAGGTAGCACACAATGTGACGCCTCATAAATaGGAGGGTGGAGCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKQPWRVQGQFLDKVAHNVTPHK*EGGASL Trigger: AAGAGAAGCTCCACCCTCCCATTTATGAGGCGTCAC...ATTGTGTGCTACCTTATCAAGAAACTGACCCTGTACCCTCCAAGGTTGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| 3UTR CAA 72 bp | ATACTAGGACACTCAAGTTCTGAAAGGCTTGAGAGCTaGGCTAAAAGTGGTGGAGCTGAGTTCCTTCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILGHSSSERLES*AKSGGAEFLPR Trigger: CCTAGGAAGGAACTCAGCTCCACCACTTTTAGCCAAGCTCTCAAGCCTTTCAGAACTTGAGTGTCCTAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR GCA 90 bp | AGCGAACATCTCACAGGTTGTATATTGTCCTGGACATTTCTACAAATGATCCTGTCTTCAGCTGGCCACTaGTGCGTGGGCCAGAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: SEHLTGCILSWTFLQMILSSAGH*CVGQKY Trigger: ATATTTCTGGCCCACGCAGCAGTGGCCAGCTGAAGA...CAGGATCATTTGTAGAAATGTCCAGGACAATATACAACCTGTGAGATGTTCGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR GCA 90 bp | CAGTTTCTTGATAAGGTAGCACACAATGTGTTTTCTCCTATGCTTCTCACACATAAGTACTGGAAGCTCTaGCGACCCTTGGGGTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QFLDKVAHNVFSPMLLTHKYWKL*RPLGSR Trigger: TCGAGACCCCAAGGGTCGGCAGAGCTTCCAGTACTT...ATGTGTGAGAAGCATAGGAGAAAACACATTGTGTGCTACCTTATCAAGAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGATCTTCTTCTTCCAGCTaGCGCAGAATGACAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFPVFQYYPNALGHLGLRSSSSS*RRMTGL Trigger: AAGCCCTGTCATTCTGCGGCAGCTGGAAGAAGAAGA...TCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | AGCGAACATCTCACAGGTTGTATATTGTCCTGGACATTTCTACAAATGATCCTGTCTGACTCCCGTCTCTaGGTTCTGCATGTCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SEHLTGCILSWTFLQMILSDSRL*VLHVLH Trigger: GTGAAGGACATGCAGAACCCAGAGACGGGAGTCAGA...CAGGATCATTTGTAGAAATGTCCAGGACAATATACAACCTGTGAGATGTTCGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR CCA 90 bp | CTTTTTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGTGACCAGGACTCTCTaGTTATGCATTCTGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFPVFQYYPNALGHLGLRVTRTL*LCILTP Trigger: GGGAGTCAGAATGCATAACCAGAGAGTCCTGGTCAC...TCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR CCA 90 bp | TCGCTTTTTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGCCGAAGACTTCACTGTaGACCTCATTAAGGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLFPVFQYYPNALGHLGLPKTSL*TSLRPV Trigger: AACAGGCCTTAATGAGGTCCACAGTGAAGTCTTCGG...CAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAAAAAGCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCAACCTTGGAGGGTACAGGGTCAGTTTCTTGATAAGGTAGCACACAATCCGAAGACTTCACTGTaGACCTCATTAAGGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QKQPWRVQGQFLDKVAHNPKTSL*TSLRPV Trigger: AACAGGCCTTAATGAGGTCCACAGTGAAGTCTTCGG...ATTGTGTGCTACCTTATCAAGAAACTGACCCTGTACCCTCCAAGGTTGCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGTGACGCCTCATAAATaGGAGGGTGGAGCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFPVFQYYPNALGHLGLRVTPHK*EGGASL Trigger: AAGAGAAGCTCCACCCTCCCATTTATGAGGCGTCAC...TCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTTCTTGATAAGGTAGCACACAATGTGTTTTCTCCTATGCTTCTCACACATGTTGCCCAGGTTCTGTaGCTCCAGGTTAGAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QFLDKVAHNVFSPMLLTHVAQVL*LQVRDP Trigger: TGGATCTCTAACCTGGAGGCACAGAACCTGGGCAAC...ATGTGTGAGAAGCATAGGAGAAAACACATTGTGTGCTACCTTATCAAGAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGAAGAATCCTTCTTCATaGGCATGTAAATGTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFQYYPNALGHLGLRASVKNPSS*ACKCGS Trigger: AGACCCACATTTACATGCTCATGAAGAAGGATTCTT...CACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR TCA 90 bp | GACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTAGAGAGGTGGGGTGAGAAGAATCCTTCTTCATaGGCATGTAAATGTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DRSQADSEVASKLERWGEKNPSS*ACKCGS Trigger: AGACCCACATTTACATGCTCATGAAGAAGGATTCTT...CTCACCCCACCTCTCTAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR GCA 90 bp | ACACGCTCCTGCAAAAGCAACCTTGGAGGGTACAGGGTCAGTTTCTTGATAAGGAGATTTCAAATAGCGTaGGTAAGAATCCTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TRSCKSNLGGYRVSFLIRRFQIA*VRILLH Trigger: ATGAAGAAGGATTCTTACGCACGCTATTTGAAATCT...CCTTATCAAGAAACTGACCCTGTACCCTCCAAGGTTGCTTTTGCAGGAGCGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| CDS-3UTR CCA 90 bp | GTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGGGATCTCCACCAATTTaGCATTTAAATCCCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VFQYYPNALGHLGLRASVGSPPI*HLNPRT Trigger: AGTTCTGGGATTTAAATGCCAAATTGGTGGAGATCC...CACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS-3UTR CCA 90 bp | TATAAGAGCCCTGTGGACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTATCTCCACTCGCATCTTaGTTGGGATCTCCACCAATT | + |
|
Preference number: 4 (lower is better) Translates to: YKSPVDRSQADSEVASKLSPLAS*LGSPPI Trigger: AATTGGTGGAGATCCCAACCAAGATGCGAGTGGAGA...TAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTCCACAGGGCTCTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| CDS-3UTR CCA 90 bp | GTTCTCCACACTGAGTTCTCTGAACTGAGACAAAGATCAAACCGTTGCCTTCCTCAGGAGAAAGAGAGCTaGTTTACCTTAACTTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLHTEFSELRQRSNRCLPQEKES*FTLTSF Trigger: AAACGAAGTTAAGGTAAACCAGCTCTCTTTCTCCTG...AGGAAGGCAACGGTTTGATCTTTGTCTCAGTTCAGAGAACTCAGTGTGGAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| CDS-3UTR CCA 90 bp | AATGAGCTGCCCCTGAGTGCTGAGATAGCAAAGTCTATAACTATGGAGAAAGGTGGATCTCCACCAATTTaGCATTTAAATCCCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: NELPLSAEIAKSITMEKGGSPPI*HLNPRT Trigger: AGTTCTGGGATTTAAATGCCAAATTGGTGGAGATCC...ACCTTTCTCCATAGTTATAGACTTTGCTATCTCAGCACTCAGGGGCAGCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| CDS-3UTR GCA 90 bp | CAGTTTCTTGATAAGGTAGCACACAATGTGTTTTCTCCTATGCTTCTCACACATCTTGTAGATCTCCTCTaGTTTCTCCTTGACCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QFLDKVAHNVFSPMLLTHLVDLL*FLLDLG Trigger: TCCAAGGTCAAGGAGAAAGCAGAGGAGATCTACAAG...ATGTGTGAGAAGCATAGGAGAAAACACATTGTGTGCTACCTTATCAAGAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| 3UTR CAA 72 bp | AGCTACTCTTACAGCGAACATCTCACAGGTTGTATATaGTCCTGGACATTTCTACAAATGATCCTGGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SYSYSEHLTGCI*SWTFLQMILVN Trigger: ATTAACCAGGATCATTTGTAGAAATGTCCAGGACAATATACAACCTGTGAGATGTTCGCTGTAAGAGTAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS GCA 90 bp | TTGGGTTTCAGCCTGGGCAGCTGTTGGCCCATGTCCCCCAGAGGCTaGACCTTCCCGTGTGACACAGAGGGGCACTTGGGTGAGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGFSLGSCWPMSPRG*TFPCDTEGHLGESL Trigger: CAGGCTCTCACCCAAGTGCCCCTCTGTGTCACACGGGAAGGTGCAGCCTCTGGGGGACATGGGCCAACAGCTGCCCAGGCTGAAACCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS-3UTR CAA 90 bp | TGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCCACGTCTGATGGCGTCTCCCTGGGCTGGGGTCTaGAGTGGTCTGCAGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CTWALGLESKCAPRLMASPWAGV*SGLQRA Trigger: AGCCCTCTGCAGACCACTCAAGACCCCAGCCCAGGG...AGACGCCATCAGACGTGGGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS-3UTR CAA 90 bp | GGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCGACACAGAGGGGCACTaGGGTGAGAGCCTGGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GERWPLGVSQSTHPCPTPDTEGH*GESLAK Trigger: TTTTGCCAGGCTCTCACCCAAGTGCCCCTCTGTGTC...GGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | TGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGCAGCCTGGGCAGCTGTaGGCCCATGTCCCCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WESARAHIPAQHPIRFFQQPGQL*AHVPQR Trigger: CCTCTGGGGGACATGGGCCAACAGCTGCCCAGGCTG...CTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS CCA 90 bp | CCCTGTATACACGGCCAGGTGAGGACTGGGAGCCAAGTGCTGACCTaGCTGGGTGATGTCCACGGTGTTGGCTGCTTCTCGAGCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PCIHGQVRTGSQVLT*LGDVHGVGCFSSFL Trigger: GAGAAAGCTCGAGAAGCAGCCAACACCGTGGACATCACCCAGCCAGGTCAGCACTTGGCTCCCAGTCCTCACCTGGCCGTGTATACAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCAACTGAGGGCCCAGAGTaGGCGCCAGACCAGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QPEHTSLPNTPFAFSSLPTEGPE*APDQLA Trigger: AGCCAGCTGGTCTGGCGCCAACTCTGGGCCCTCAGT...TGGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCACTGAGGGCCCAGAGTaGGCGCCAGACCAGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SARAHIPAQHPIRFFQSSTEGPE*APDQLA Trigger: AGCCAGCTGGTCTGGCGCCAACTCTGGGCCCTCAGT...GGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | TTTAAGGCAGCAAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGCAGCCTGGGCAGCTGTaGGCCCATGTCCCCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FKAARDIFWPTCLSGQARQPGQL*AHVPQR Trigger: CCTCTGGGGGACATGGGCCAACAGCTGCCCAGGCTG...CCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTTGCTGCCTTAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGGAAAGGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCAGGGCTTCGATCTTTaGGAGAAATGCCATCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGKGERWPLGVSQSTHPCQGFDL*EKCHPR Trigger: CCGAGGATGGCATTTCTCCAAAAGATCGAAGCCCTG...GCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCCTTTCCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR CAA 90 bp | AGGGAAAGGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCGCGTACCTGTCGGCTTaGTTCCTTTCCTTTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RERGKVAVGSQPEHTSLPAYLSA*FLSFPV Trigger: GACTGGAAAGGAAAGGAACAAAGCCGACAGGTACGC...GGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCCTTTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR CAA 90 bp | TTAAGGCAGCAAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGCAGCTGGCTTCCCCCTaGGGCTCCAGTCCCGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LRQQGISSGPHACLAKQGQLASP*GSSPEE Trigger: TTCTTCGGGACTGGAGCCCAAGGGGGAAGCCAGCTG...CCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTTGCTGCCTTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS TCA 90 bp | AGGCGCTGGGTGATCCACTGCAGCACGTCACCTCCTGTCATGGCGTaGGGGACACTGGTGACCAGGACTCTCTGGTTATGCATTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: RRWVIHCSTSPPVMA*GTLVTRTLWLCILT Trigger: AGTCAGAATGCATAACCAGAGAGTCCTGGTCACCAGTGTCCCTCACGCCATGACAGGAGGTGACGTGCTGCAGTGGATCACCCAGCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
||
| CDS TCA 90 bp | TCTTCCAGCTGCCGCAGAATGACAGGGCTTGGGCTGGAGCGTAGGTaGCGCCTCATAAATGGGAGGGTGGAGCTTCTCTTGGTGGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSCRRMTGLGLERR*RLINGRVELLLVVS Trigger: GGAAACCACCAAGAGAAGCTCCACCCTCCCATTTATGAGGCGTCACCTACGCTCCAGCCCAAGCCCTGTCATTCTGCGGCAGCTGGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
||
| CDS TCA 90 bp | ACACGGCCAGGTGAGGACTGGGAGCCAAGTGCTGACCTGGCTGGGTaGTGTCCACGGTGTTGGCTGCTTCTCGAGCTTTCTCTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TRPGEDWEPSADLAG*CPRCWLLLELSLLL Trigger: AAGAAGAAGAGAAAGCTCGAGAAGCAGCCAACACCGTGGACATCACCCAGCCAGGTCAGCACTTGGCTCCCAGTCCTCACCTGGCCGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | TGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCCACGTCTGATGGCGTCTTTAACTTCGTTTGGATaGGTCACGCGGTCCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CTWALGLESKCAPRLMASLTSFG*VTRSRP Trigger: CGGCCTGGACCGCGTGACCAATCCAAACGAAGTTAA...AGACGCCATCAGACGTGGGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR CAA 90 bp | GGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCATCAGTTCGCTGAAGTaGAAAGCCCATCTCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GERWPLGVSQSTHPCPTPISSLK*KAHLST Trigger: AGTGGAGAGATGGGCTTTCAACTTCAGCGAACTGAT...GGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCAGGGTGGAGCTTCTCTaGGTGGTTTCCTGGGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SARAHIPAQHPIRFFQSSRVELL*VVSWGS Trigger: CGAGCCCCAGGAAACCACCAAGAGAAGCTCCACCCT...GGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | TTAAGGCAGCAAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGAGGGTGGAGCTTCTCTaGGTGGTTTCCTGGGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LRQQGISSGPHACLAKQGRVELL*VVSWGS Trigger: CGAGCCCCAGGAAACCACCAAGAGAAGCTCCACCCT...CCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTTGCTGCCTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | TGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCCACGTCTGATGGCGTCTGTGATGTCCACGGTGTaGGCTGCTTCTCGAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CTWALGLESKCAPRLMASVMSTV*AASRAF Trigger: GAAAGCTCGAGAAGCAGCCAACACCGTGGACATCAC...AGACGCCATCAGACGTGGGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | TGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGGACACAGAGGGGCACTaGGGTGAGAGCCTGGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: WESARAHIPAQHPIRFFQDTEGH*GESLAK Trigger: TTTTGCCAGGCTCTCACCCAAGTGCCCCTCTGTGTC...CTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS TCA 90 bp | CACCTGGGGCCAGGAACAGCTTGTAGATCTCCTCTGCTTTCTCCTTaGCCTTGGACTGATCGCCGTACTTCAGGTCCTCACAGGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HLGPGTACRSPLLSP*PWTDRRTSGPHRLP Trigger: GGGAAGCCTGTGAGGACCTGAAGTACGGCGATCAGTCCAAGGTCAAGGAGAAAGCAGAGGAGATCTACAAGCTGTTCCTGGCCCCAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
||
| CDS CCA 90 bp | TTCATTCCAGGCGGACTTCGGTGCACCAGCCAATACGCCTTCTCCTaGCAGTCCAGCGCGTACCTGTCGGCTTTGTTCCTTTCCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FIPGGLRCTSQYAFS*QSSAYLSALFLSFP Trigger: TGGAAAGGAAAGGAACAAAGCCGACAGGTACGCGCTGGACTGCCAGGAGAAGGCGTATTGGCTGGTGCACCGAAGTCCGCCTGGAATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGAGACTGCTGTCCGGCTaGAGGATGAGATTCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WESARAHIPAQHPIRFFQRLLSG*RMRFLG Trigger: CCCCAAGAATCTCATCCTCAAGCCGGACAGCAGTCT...CTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS CCA 90 bp | GTAGTCTGTGTCTTCAGCTGGCCACTGCTGCGTGGGCCAGAAATATaGCGTCTGAAATCGGTAGAGACTGCTGTCCGGCTTGAGGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VVCVFSWPLLRGPEI*RLKSVETAVRLEDE Trigger: CTCATCCTCAAGCCGGACAGCAGTCTCTACCGATTTCAGACGCCATATTTCTGGCCCACGCAGCAGTGGCCAGCTGAAGACACAGACTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGGAGCTGGATGAGGTACTTGGGCTGGGTGATGGGAAGAGCTGGATGCAGTCAGGGCTTCGATCTTTaGGAGAAATGCCATCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ARSWMRYLGWVMGRAGCSQGFDL*EKCHPR Trigger: CCGAGGATGGCATTTCTCCAAAAGATCGAAGCCCTG...ACTGCATCCAGCTCTTCCCATCACCCAGCCCAAGTACCTCATCCAGCTCCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR CAA 90 bp | ACCTTGTCGGACCTCAAGGCATGGAATGAGCTGCCCCTGAGTGCTGAGATAGCAAGACTGCTGTCCGGCTaGAGGATGAGATTCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLSDLKAWNELPLSAEIARLLSG*RMRFLG Trigger: CCCCAAGAATCTCATCCTCAAGCCGGACAGCAGTCT...TGCTATCTCAGCACTCAGGGGCAGCTCATTCCATGCCTTGAGGTCCGACAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGGAGCTGGATGAGGTACTTGGGCTGGGTGATGGGAAGAGCTGGATGCAGTGCGTACCTGTCGGCTTaGTTCCTTTCCTTTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ARSWMRYLGWVMGRAGCSAYLSA*FLSFPV Trigger: GACTGGAAAGGAAAGGAACAAAGCCGACAGGTACGC...ACTGCATCCAGCTCTTCCCATCACCCAGCCCAAGTACCTCATCCAGCTCCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR CAA 90 bp | TTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGACATGATGGCGTCATaGGACGAGAACTGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGVSQSTHPCPTPHSLFPDMMAS*DENCSL Trigger: CAGCGAGCAGTTCTCGTCCAATGACGCCATCATGTC...TGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | GAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTGACATGATGGCGTCATaGGACGAGAACTGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ESARAHIPAQHPIRFFQSDMMAS*DENCSL Trigger: CAGCGAGCAGTTCTCGTCCAATGACGCCATCATGTC...AGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | AAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGAAAGGCAGGGCCACTCGCATCTTGGTaGGGATCTCCACCAATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KGYLLAHMPVWPSKGKAGPLASW*GSPPIW Trigger: CCAAATTGGTGGAGATCCCAACCAAGATGCGAGTGG...CCCTGCCTTTCCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | TGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGCTCTCCACTCGCATCTaGGTTGGGATCTCCACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: WESARAHIPAQHPIRFFQLSTRI*VGISTN Trigger: ATTGGTGGAGATCCCAACCAAGATGCGAGTGGAGAG...CTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | TGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGAAGTTGGCTACTTTCTaGGGTTTCAGCCTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WESARAHIPAQHPIRFFQKLATF*GFSLGS Trigger: GCTGCCCAGGCTGAAACCCAAGAAAGTAGCCAACTT...CTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | ACCTTGTCGGACCTCAAGGCATGGAATGAGCTGCCCCTGAGTGCTGAGATAGCACAGCTCCTTTTTGAGTaGGCTCCTGCGGTCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLSDLKAWNELPLSAEIAQLLFE*APAVQL Trigger: AAGCTGGACCGCAGGAGCCAACTCAAAAAGGAGCTG...TGCTATCTCAGCACTCAGGGGCAGCTCATTCCATGCCTTGAGGTCCGACAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS CCA 90 bp | CTAGATAGATGGCGTAGTCTGTGTCTTCAGCTGGCCACTGCTGCGTaGGCCAGAAATATGGCGTCTGAAATCGGTAGAGACTGCTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LDRWRSLCLQLATAA*ARNMASEIGRDCCP Trigger: CGGACAGCAGTCTCTACCGATTTCAGACGCCATATTTCTGGCCCACGCAGCAGTGGCCAGCTGAAGACACAGACTACGCCATCTATCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCCCACTCGCATCTTGGTaGGGATCTCCACCAATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SARAHIPAQHPIRFFQSSPLASW*GSPPIW Trigger: CCAAATTGGTGGAGATCCCAACCAAGATGCGAGTGG...GGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | TTTAAGGCAGCAAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGTGATGTCCACGGTGTaGGCTGCTTCTCGAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FKAARDIFWPTCLSGQARVMSTV*AASRAF Trigger: GAAAGCTCGAGAAGCAGCCAACACCGTGGACATCAC...CCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTTGCTGCCTTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCAAGTTGGCTACTTTCTaGGGTTTCAGCCTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SARAHIPAQHPIRFFQSSKLATF*GFSLGS Trigger: GCTGCCCAGGCTGAAACCCAAGAAAGTAGCCAACTT...GGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | GGGGAAAGGTGGCCGTTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCGTAGGCATTTCCATTTaGATCTGGAAAAAGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GERWPLGVSQSTHPCPTPVGISI*IWKKLA Trigger: AGCCAACTTTTTCCAGATCAAAATGGAAATGCCTAC...GGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAACGGCCACCTTTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCAGTCCGGTACTGCTCTTaGGCCTGCATGATGACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QPEHTSLPNTPFAFSSLPVRYCS*ACMMTK Trigger: TTTTGTCATCATGCAGGCCAAAGAGCAGTACCGGAC...TGGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR CAA 90 bp | TCGCTTTTTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGCCCTGGGCTGGGGTCTaGAGTGGTCTGCAGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLFPVFQYYPNALGHLGLPWAGV*SGLQRA Trigger: AGCCCTCTGCAGACCACTCAAGACCCCAGCCCAGGG...CAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAAAAAGCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS CCA 90 bp | TACTGCTCCACAATGGTCAGTGTGCACACACAGGAGAAAGAGAGCTaGTTTACCTTAACTTCGTTTGGATTGGTCACGCGGTCCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: YCSTMVSVHTQEKES*FTLTSFGLVTRSRP Trigger: CGGCCTGGACCGCGTGACCAATCCAAACGAAGTTAAGGTAAACCAGCTCTCTTTCTCCTGTGTGTGCACACTGACCATTGTGGAGCAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCATACTTGACAATAAAGTaGCCCAGGTTCTGTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QPEHTSLPNTPFAFSSLPYLTIK*PRFCAS Trigger: GGAGGCACAGAACCTGGGCAACTTTATTGTCAAGTA...TGGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR CAA 90 bp | TTAAGGCAGCAAGGGATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGGAGATTCTTGGGGTCTaGCAAAGGATAGATGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRQQGISSGPHACLAKQGEILGV*QRIDVA Trigger: GGCTACATCTATCCTTTGCAAGACCCCAAGAATCTC...CCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATCCCTTGCTGCCTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR CAA 90 bp | AAAACCCACTTGCTGGGCATCAGAGCCCACCAGACAGGACTTAGAGGGGGTTTAGTCCGGTACTGCTCTTaGGCCTGCATGATGACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KTHLLGIRAHQTGLRGGLVRYCS*ACMMTK Trigger: TTTTGTCATCATGCAGGCCAAAGAGCAGTACCGGAC...TAAACCCCCTCTAAGTCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTGGGTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCAATCAGTTCGCTGAAGTaGAAAGCCCATCTCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: QPEHTSLPNTPFAFSSLPISSLK*KAHLST Trigger: AGTGGAGAGATGGGCTTTCAACTTCAGCGAACTGAT...TGGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | ACCTTGTCGGACCTCAAGGCATGGAATGAGCTGCCCCTGAGTGCTGAGATAGCAGTGATGTCCATGGTTTaGCCGTCTATGTTGATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TLSDLKAWNELPLSAEIAVMSMV*PSMLIH Trigger: GTGGATCAACATAGACGGCAAAACCATGGACATCAC...TGCTATCTCAGCACTCAGGGGCAGCTCATTCCATGCCTTGAGGTCCGACAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGCACAGCTGGCTTCCCCCTaGGGCTCCAGTCCCGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FPVFQYYPNALGHLGLRAQLASP*GSSPEE Trigger: TTCTTCGGGACTGGAGCCCAAGGGGGAAGCCAGCTG...TGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS GCA 90 bp | ACCAGGACTCTCTGGTTATGCATTCTGACTCCCGTCTCTGGGTTCTaGATGTCCTTCACCAGGGCTTCGATCTTTTGGAGAAATGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: TRTLWLCILTPVSGF*MSFTRASIFWRNAI Trigger: GATGGCATTTCTCCAAAAGATCGAAGCCCTGGTGAAGGACATGCAGAACCCAGAGACGGGAGTCAGAATGCATAACCAGAGAGTCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
||
| CDS CCA 90 bp | ACTGGTGACCAGGACTCTCTGGTTATGCATTCTGACTCCCGTCTCTaGGTTCTGCATGTCCTTCACCAGGGCTTCGATCTTTTGGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TGDQDSLVMHSDSRL*VLHVLHQGFDLLEK Trigger: TTTCTCCAAAAGATCGAAGCCCTGGTGAAGGACATGCAGAACCCAGAGACGGGAGTCAGAATGCATAACCAGAGAGTCCTGGTCACCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | ACACGCTCCTGCAAAAGCAACCTTGGAGGGTACAGGGTCAGTTTCTTGATAAGGGCGTACCTGTCGGCTTaGTTCCTTTCCTTTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TRSCKSNLGGYRVSFLIRAYLSA*FLSFPV Trigger: GACTGGAAAGGAAAGGAACAAAGCCGACAGGTACGC...CCTTATCAAGAAACTGACCCTGTACCCTCCAAGGTTGCTTTTGCAGGAGCGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGTCTTCCGGGATCTCCACCAATTaGGCATTTAAATCCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SARAHIPAQHPIRFFQSSGISTN*AFKSQN Trigger: GTTCTGGGATTTAAATGCCAAATTGGTGGAGATCCC...GGAAGACTGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | TTGGGAGTCAGCCAGAGCACACATCCCTGCCCAACACCCCATTCGCTTTTTCCAGGGATCTCCACCAATTaGGCATTTAAATCCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LGVSQSTHPCPTPHSLFPGISTN*AFKSQN Trigger: GTTCTGGGATTTAAATGCCAAATTGGTGGAGATCCC...TGGAAAAAGCGAATGGGGTGTTGGGCAGGGATGTGTGCTCTGGCTGACTCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | GATAAGGTAGCACACAATGTGTTTTCTCCTATGCTTCTCACACATGTGCTCCCTAGGGTGGAGCTTCTCTaGGTGGTTTCCTGGGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DKVAHNVFSPMLLTHVLPRVELL*VVSWGS Trigger: CGAGCCCCAGGAAACCACCAAGAGAAGCTCCACCCT...AGGGAGCACATGTGTGAGAAGCATAGGAGAAAACACATTGTGTGCTACCTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | GTAAAGCCTCTTTTAAAACCCACTTGCTGGGCATCAGAGCCCACCAGACAGGACGAGATTCTTGGGGTCTaGCAAAGGATAGATGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VKPLLKPTCWASEPTRQDEILGV*QRIDVA Trigger: GGCTACATCTATCCTTTGCAAGACCCCAAGAATCTC...GTCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTGGGTTTTAAAAGAGGCTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR CAA 90 bp | GTAGGGCCAAATATTCTTTGGAATGAAACAGGGTGGTGGGGAGACATACACACTAGACTGCTGTCCGGCTaGAGGATGAGATTCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGPNILWNETGWWGDIHTRLLSG*RMRFLG Trigger: CCCCAAGAATCTCATCCTCAAGCCGGACAGCAGTCT...AGTGTGTATGTCTCCCCACCACCCTGTTTCATTCCAAAGAATATTTGGCCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGTTTTCTCCTATGCTTCTCACACATGTGCTCCCTAAAGCAATGTGGCTGGTTAACTTCGTTTGGATaGGTCACGCGGTCCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: MCFLLCFSHMCSLKQCGWLTSFG*VTRSRP Trigger: CGGCCTGGACCGCGTGACCAATCCAAACGAAGTTAA...CCAGCCACATTGCTTTAGGGAGCACATGTGTGAGAAGCATAGGAGAAAACACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | GATATCTTCTGGCCCACATGCCTGTCTGGCCAAGCAAGGGAAAGGCAGGGAAAGGACAGCAGTGACAGTTaGTTTCTTAACTTCGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: DIFWPTCLSGQARERQGKDSSDS*FLNFVW Trigger: CCAAACGAAGTTAAGAAACAAACTGTCACTGCTGTC...CTTTCCCTGCCTTTCCCTTGCTTGGCCAGACAGGCATGTGGGCCAGAAGATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020920.10 |
||
| CDS-3UTR CAA 90 bp | TATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGCAAGTGTGCCCCACGTCGTGATGTCCATGGTTTaGCCGTCTATGTTGATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: YYPNALGHLGLRASVPHVVMSMV*PSMLIH Trigger: GTGGATCAACATAGACGGCAAAACCATGGACATCAC...GACGTGGGGCACACTTGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | GACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTAGAGAGGTGGGGTGAGGTGATGTCCACGGTGTaGGCTGCTTCTCGAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DRSQADSEVASKLERWGEVMSTV*AASRAF Trigger: GAAAGCTCGAGAAGCAGCCAACACCGTGGACATCAC...CTCACCCCACCTCTCTAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS CCA 90 bp | ATCTTGGTTGGGATCTCCACCAATTTGGCATTTAAATCCCAGAACTaGGTGTCGTCTGTTATCCAAGGATTGCTTGGAAGGCAGCCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ILVGISTNLAFKSQN*VSSVIQGLLGRQPD Trigger: GTCCGGCTGCCTTCCAAGCAATCCTTGGATAACAGACGACACCCAGTTCTGGGATTTAAATGCCAAATTGGTGGAGATCCCAACCAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
||
| CDS CCA 90 bp | TCCATCAGGCAGGTCCCACTGTCTGTAGGCATTTCCATTTTGATCTaGAAAAAGTTGGCTACTTTCTTGGGTTTCAGCCTGGGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SIRQVPLSVGISILI*KKLATFLGFSLGSC Trigger: ACAGCTGCCCAGGCTGAAACCCAAGAAAGTAGCCAACTTTTTCCAGATCAAAATGGAAATGCCTACAGACAGTGGGACCTGCCTGATGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | AGTAAAGCCTCTTTTAAAACCCACTTGCTGGGCATCAGAGCCCACCAGACAGGATACTTGACAATAAAGTaGCCCAGGTTCTGTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKASFKTHLLGIRAHQTGYLTIK*PRFCAS Trigger: GGAGGCACAGAACCTGGGCAACTTTATTGTCAAGTA...TCCTGTCTGGTGGGCTCTGATGCCCAGCAAGTGGGTTTTAAAAGAGGCTTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| CDS-3UTR CAA 90 bp | CAAAAGCAACCTTGGAGGGTACAGGGTCAGTTTCTTGATAAGGTAGCACACAATGACATGATGGCGTCATaGGACGAGAACTGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QKQPWRVQGQFLDKVAHNDMMAS*DENCSL Trigger: CAGCGAGCAGTTCTCGTCCAATGACGCCATCATGTC...ATTGTGTGCTACCTTATCAAGAAACTGACCCTGTACCCTCCAAGGTTGCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | GACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTAGAGAGGTGGGGTGAGCCACTCGCATCTTGGTaGGGATCTCCACCAATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: DRSQADSEVASKLERWGEPLASW*GSPPIW Trigger: CCAAATTGGTGGAGATCCCAACCAAGATGCGAGTGG...CTCACCCCACCTCTCTAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | TATAAGAGCCCTGTGGACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTAGGAGGCAGCTCCTTTTaGAGTTGGCTCCTGCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: YKSPVDRSQADSEVASKLGGSSF*SWLLRS Trigger: GGACCGCAGGAGCCAACTCAAAAAGGAGCTGCCTCC...TAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTCCACAGGGCTCTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | AATGAGCTGCCCCTGAGTGCTGAGATAGCAAAGTCTATAACTATGGAGAAAGGTCAGGGCTTCGATCTTTaGGAGAAATGCCATCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: NELPLSAEIAKSITMEKGQGFDL*EKCHPR Trigger: CCGAGGATGGCATTTCTCCAAAAGATCGAAGCCCTG...ACCTTTCTCCATAGTTATAGACTTTGCTATCTCAGCACTCAGGGGCAGCTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | TCGCTTTTTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGCTCTCCACTCGCATCTaGGTTGGGATCTCCACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLFPVFQYYPNALGHLGLLSTRI*VGISTN Trigger: ATTGGTGGAGATCCCAACCAAGATGCGAGTGGAGAG...CAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAAAAAGCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCAACCTTGGAGGGTACAGGGTCAGTTTCTTGATAAGGTAGCACACAATCTCTCCACTCGCATCTaGGTTGGGATCTCCACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: QKQPWRVQGQFLDKVAHNLSTRI*VGISTN Trigger: ATTGGTGGAGATCCCAACCAAGATGCGAGTGGAGAG...ATTGTGTGCTACCTTATCAAGAAACTGACCCTGTACCCTCCAAGGTTGCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | ACACGCTCCTGCAAAAGCAACCTTGGAGGGTACAGGGTCAGTTTCTTGATAAGGGACAGCAGTGACAGTTaGTTTCTTAACTTCGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TRSCKSNLGGYRVSFLIRDSSDS*FLNFVW Trigger: CCAAACGAAGTTAAGAAACAAACTGTCACTGCTGTC...CCTTATCAAGAAACTGACCCTGTACCCTCCAAGGTTGCTTTTGCAGGAGCGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | GATAAGGTAGCACACAATGTGTTTTCTCCTATGCTTCTCACACATGTGCTCCCTGAGATTCTTGGGGTCTaGCAAAGGATAGATGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DKVAHNVFSPMLLTHVLPEILGV*QRIDVA Trigger: GGCTACATCTATCCTTTGCAAGACCCCAAGAATCTC...AGGGAGCACATGTGTGAGAAGCATAGGAGAAAACACATTGTGTGCTACCTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | GACAGATCACAAGCAGATTCAGAAGTGGCATCTAAATTAGAGAGGTGGGGTGAGGGGATCTCCACCAATTaGGCATTTAAATCCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DRSQADSEVASKLERWGEGISTN*AFKSQN Trigger: GTTCTGGGATTTAAATGCCAAATTGGTGGAGATCCC...CTCACCCCACCTCTCTAATTTAGATGCCACTTCTGAATCTGCTTGTGATCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS TCA 90 bp | TATAGATTGGAGATTTCAAATAGCGTGCGTAAGAATCCTTCTTCATaGGCATGTAAATGTGGGTCTGCGCTGCATCCAGTACATAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: YRLEISNSVRKNPSS*ACKCGSALHPVHSG Trigger: ACCGCTATGTACTGGATGCAGCGCAGACCCACATTTACATGCTCATGAAGAAGGATTCTTACGCACGCTATTTGAAATCTCCAATCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS CCA 90 bp | GGTTTCCTGGGGCTCGATAGCTTTGGCCAGCATTTCTTTATAGATTaGAGATTTCAAATAGCGTGCGTAAGAATCCTTCTTCATGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GFLGLDSFGQHFFID*RFQIACVRILLHEH Trigger: ATGCTCATGAAGAAGGATTCTTACGCACGCTATTTGAAATCTCCAATCTATAAAGAAATGCTGGCCAAAGCTATCGAGCCCCAGGAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTTCTTGATAAGGTAGCACACAATGTGTTTTCTCCTATGCTTCTCACACATGTCCGGTACTGCTCTTaGGCCTGCATGATGACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QFLDKVAHNVFSPMLLTHVRYCS*ACMMTK Trigger: TTTTGTCATCATGCAGGCCAAAGAGCAGTACCGGAC...ATGTGTGAGAAGCATAGGAGAAAACACATTGTGTGCTACCTTATCAAGAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | CAATTACATGTTCTAATGATAACAGTAACAGCTACTCTTACAGCGAACATCTCATTAACTTCGTTTGGATaGGTCACGCGGTCCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QLHVLMITVTATLTANISLTSFG*VTRSRP Trigger: CGGCCTGGACCGCGTGACCAATCCAAACGAAGTTAA...TGAGATGTTCGCTGTAAGAGTAGCTGTTACTGTTATCATTAGAACATGTAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
||
| CDS-3UTR CAA 90 bp | CAGTTTCTTGATAAGGTAGCACACAATGTGTTTTCTCCTATGCTTCTCACACATATCAGTTCGCTGAAGTaGAAAGCCCATCTCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: QFLDKVAHNVFSPMLLTHISSLK*KAHLST Trigger: AGTGGAGAGATGGGCTTTCAACTTCAGCGAACTGAT...ATGTGTGAGAAGCATAGGAGAAAACACATTGTGTGCTACCTTATCAAGAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCAGTCTTCCAATATTATCCTAATGCACTTGGGCACTTGGGCTTGAGAGCAGTAGGCATTTCCATTTaGATCTGGAAAAAGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FPVFQYYPNALGHLGLRAVGISI*IWKKLA Trigger: AGCCAACTTTTTCCAGATCAAAATGGAAATGCCTAC...TGCTCTCAAGCCCAAGTGCCCAAGTGCATTAGGATAATATTGGAAGACTGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS TCA 72 bp | TGGGCGAGGGGCAGATGGCAATGCTGGGCCGCCGGATaGAGCGACTCGGGGAAGCAAAGGGCTTCCTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WARGRWQCWAAG*SDSGKQRASWG Trigger: CCCCCAGGAAGCCCTTTGCTTCCCCGAGTCGCTTCATCCGGCGGCCCAGCATTGCCATCTGCCCCTCGCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS CCA 72 bp | GCTCCAGTCCCGAAGAACCCTCCAAAGCCACTCGGCTaGGCGAGGGGCAGATGGCAATGCTGGGCCGCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: APVPKNPPKPLG*ARGRWQCWAAG Trigger: TCCGGCGGCCCAGCATTGCCATCTGCCCCTCGCCCAGCCGAGTGGCTTTGGAGGGTTCTTCGGGACTGGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS CAA 72 bp | GGCCCAGAGTTGGCGCCAGACCAGCTGGCTTCCCCCTaGGGCTCCAGTCCCGAAGAACCCTCCAAAGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: GPELAPDQLASP*GSSPEEPSKAT Trigger: AGTGGCTTTGGAGGGTTCTTCGGGACTGGAGCCCAAGGGGGAAGCCAGCTGGTCTGGCGCCAACTCTGGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS CAA 72 bp | GAGGGCTCTCTGTTCTCAGTGACTGAGGGCCCAGAGTaGGCGCCAGACCAGCTGGCTTCCCCCTTGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EGSLFSVTEGPE*APDQLASPLGS Trigger: GGAGCCCAAGGGGGAAGCCAGCTGGTCTGGCGCCAACTCTGGGCCCTCAGTCACTGAGAACAGAGAGCCCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS CCA 72 bp | CACGGCCAGGTGAGGACTGGGAGCCAAGTGCTGACCTaGCTGGGTGATGTCCACGGTGTTGGCTGCTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: HGQVRTGSQVLT*LGDVHGVGCFS Trigger: CGAGAAGCAGCCAACACCGTGGACATCACCCAGCCAGGTCAGCACTTGGCTCCCAGTCCTCACCTGGCCGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS CAA 90 bp | TGGTCTGCAGAGGGCTCTCTGTTCTCAGTGACTGAGGGCCCAGAGTaGGCGCCAGACCAGCTGGCTTCCCCCTTGGGCTCCAGTCCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: WSAEGSLFSVTEGPE*APDQLASPLGSSPE Trigger: TTCGGGACTGGAGCCCAAGGGGGAAGCCAGCTGGTCTGGCGCCAACTCTGGGCCCTCAGTCACTGAGAACAGAGAGCCCTCTGCAGACCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS GCA 72 bp | AAACTGGTGATGCCAAACAGCCCCGTCTCAGGAACCTaGCAAGGGACAGAGCTGCACGGGCCTTGGGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KLVMPNSPVSGT*QGTELHGPWEG Trigger: CCCCTCCCAAGGCCCGTGCAGCTCTGTCCCTTGGCAGGTTCCTGAGACGGGGCTGTTTGGCATCACCAGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS TCA 72 bp | GTCTTGAGTGGTCTGCAGAGGGCTCTCTGTTCTCAGTaGCTGAGGGCCCAGAGTTGGCGCCAGACCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VLSGLQRALCSQ*LRAQSWRQTSW Trigger: CCAGCTGGTCTGGCGCCAACTCTGGGCCCTCAGTCACTGAGAACAGAGAGCCCTCTGCAGACCACTCAAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS CCA 72 bp | GGCGGACTTCGGTGCACCAGCCAATACGCCTTCTCCTaGCAGTCCAGCGCGTACCTGTCGGCTTTGTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GGLRCTSQYAFS*QSSAYLSALFL Trigger: AAGGAACAAAGCCGACAGGTACGCGCTGGACTGCCAGGAGAAGGCGTATTGGCTGGTGCACCGAAGTCCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
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| CDS CAA 72 bp | GTTGGCTACTTTCTTGGGTTTCAGCCTGGGCAGCTGTaGGCCCATGTCCCCCAGAGGCTGCACCTTCCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: VGYFLGFQPGQL*AHVPQRLHLPV Trigger: CACGGGAAGGTGCAGCCTCTGGGGGACATGGGCCAACAGCTGCCCAGGCTGAAACCCAAGAAAGTAGCCAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS CCA 72 bp | TTGGCTACTTTCTTGGGTTTCAGCCTGGGCAGCTGTTaGCCCATGTCCCCCAGAGGCTGCACCTTCCCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LATFLGFSLGSC*PMSPRGCTFPC Trigger: ACACGGGAAGGTGCAGCCTCTGGGGGACATGGGCCAACAGCTGCCCAGGCTGAAACCCAAGAAAGTAGCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS CAA 72 bp | CCCTTCACGGTGATGTCCATGGTTTTGCCGTCTATGTaGATCCACCGCCTCGCACCTGGGGCCAGGAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: PFTVMSMVLPSM*IHRLAPGARNS Trigger: GCTGTTCCTGGCCCCAGGTGCGAGGCGGTGGATCAACATAGACGGCAAAACCATGGACATCACCGTGAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS TCA 72 bp | GTGATCCACTGCAGCACGTCACCTCCTGTCATGGCGTaGGGGACACTGGTGACCAGGACTCTCTGGTTATGC | + |
|
Preference number: 6 (lower is better) Translates to: VIHCSTSPPVMA*GTLVTRTLWLC Trigger: GCATAACCAGAGAGTCCTGGTCACCAGTGTCCCTCACGCCATGACAGGAGGTGACGTGCTGCAGTGGATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
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| CDS TCA 72 bp | TGCCGCAGAATGACAGGGCTTGGGCTGGAGCGTAGGTaGCGCCTCATAAATGGGAGGGTGGAGCTTCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CRRMTGLGLERR*RLINGRVELLL Trigger: CAAGAGAAGCTCCACCCTCCCATTTATGAGGCGTCACCTACGCTCCAGCCCAAGCCCTGTCATTCTGCGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS CCA 72 bp | GAGGCTGCACCTTCCCGTGTGACACAGAGGGGCACTTaGGTGAGAGCCTGGCAAAAACTGGTGATGCCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: EAAPSRVTQRGT*VRAWQKLVMPN Trigger: GTTTGGCATCACCAGTTTTTGCCAGGCTCTCACCCAAGTGCCCCTCTGTGTCACACGGGAAGGTGCAGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS CAA 72 bp | GGCAGCTCCTTTTTGAGTTGGCTCCTGCGGTCCAGCTaGCTCATGACCTGGGTGATGTCCACGGTGTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSSFLSWLLRSS*LMTWVMSTVLA Trigger: AGCCAACACCGTGGACATCACCCAGGTCATGAGCAAGCTGGACCGCAGGAGCCAACTCAAAAAGGAGCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
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| CDS CAA 90 bp | AGCCAATACGCCTTCTCCTGGCAGTCCAGCGCGTACCTGTCGGCTTaGTTCCTTTCCTTTCCAGTCCGGTACTGCTCTTTGGCCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: SQYAFSWQSSAYLSA*FLSFPVRYCSLACM Trigger: CATGCAGGCCAAAGAGCAGTACCGGACTGGAAAGGAAAGGAACAAAGCCGACAGGTACGCGCTGGACTGCCAGGAGAAGGCGTATTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
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| CDS GCA 72 bp | GACTTCTTTTTCTGTGGTCTGGTCACCAGACTCTCCTaGTCTGGGGTCATCCGAGTCCATCAGGCAGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: DFFFCGLVTRLS*SGVIRVHQAGP Trigger: GGGACCTGCCTGATGGACTCGGATGACCCCAGAGCAGGAGAGTCTGGTGACCAGACCACAGAAAAAGAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS CCA 72 bp | AGGTTCTGTGCCTCCAGGTTAGAGATCCAAAGGCGCTaGGTGATCCACTGCAGCACGTCACCTCCTGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: RFCASRLEIQRR*VIHCSTSPPVM Trigger: CATGACAGGAGGTGACGTGCTGCAGTGGATCACCCAGCGCCTTTGGATCTCTAACCTGGAGGCACAGAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
||
| CDS CCA 72 bp | GTCTTCAGCTGGCCACTGCTGCGTGGGCCAGAAATATaGCGTCTGAAATCGGTAGAGACTGCTGTCCGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VFSWPLLRGPEI*RLKSVETAVRL Trigger: AAGCCGGACAGCAGTCTCTACCGATTTCAGACGCCATATTTCTGGCCCACGCAGCAGTGGCCAGCTGAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
||
| CDS CCA 72 bp | CTTTTTCTGTGGTCTGGTCACCAGACTCTCCTGCTCTaGGGTCATCCGAGTCCATCAGGCAGGTCCCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: LFLWSGHQTLLL*GHPSPSGRSHC Trigger: ACAGTGGGACCTGCCTGATGGACTCGGATGACCCCAGAGCAGGAGAGTCTGGTGACCAGACCACAGAAAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS CAA 72 bp | GCCTTCTCCTGGCAGTCCAGCGCGTACCTGTCGGCTTaGTTCCTTTCCTTTCCAGTCCGGTACTGCTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: AFSWQSSAYLSA*FLSFPVRYCSL Trigger: CAAAGAGCAGTACCGGACTGGAAAGGAAAGGAACAAAGCCGACAGGTACGCGCTGGACTGCCAGGAGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
||
| CDS CAA 72 bp | AGAGGCTGCACCTTCCCGTGTGACACAGAGGGGCACTaGGGTGAGAGCCTGGCAAAAACTGGTGATGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RGCTFPCDTEGH*GESLAKTGDAK Trigger: TTTGGCATCACCAGTTTTTGCCAGGCTCTCACCCAAGTGCCCCTCTGTGTCACACGGGAAGGTGCAGCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
||
| CDS CAA 90 bp | TGGAAGCTCTGCCGACCCTTGGGGTCTCGAATCAGTTCGCTGAAGTaGAAAGCCCATCTCTCCACTCGCATCTTGGTTGGGATCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: WKLCRPLGSRISSLK*KAHLSTRILVGIST Trigger: GGTGGAGATCCCAACCAAGATGCGAGTGGAGAGATGGGCTTTCAACTTCAGCGAACTGATTCGAGACCCCAAGGGTCGGCAGAGCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
||
| CDS CAA 90 bp | CATTTAGGAGGCAGCTCCTTTTTGAGTTGGCTCCTGCGGTCCAGCTaGCTCATGACCTGGGTGATGTCCACGGTGTTGGCTGCTTCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: HLGGSSFLSWLLRSS*LMTWVMSTVLAASR Trigger: TCGAGAAGCAGCCAACACCGTGGACATCACCCAGGTCATGAGCAAGCTGGACCGCAGGAGCCAACTCAAAAAGGAGCTGCCTCCTAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106706.8 |
||
| CDS GCA 72 bp | CGCACCTGGGGCCAGGAACAGCTTGTAGATCTCCTCTaGTTTCTCCTTGACCTTGGACTGATCGCCGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: RTWGQEQLVDLL*FLLDLGLIAVL Trigger: AAGTACGGCGATCAGTCCAAGGTCAAGGAGAAAGCAGAGGAGATCTACAAGCTGTTCCTGGCCCCAGGTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
||
| CDS CCA 72 bp | TGGCGTAGTCTGTGTCTTCAGCTGGCCACTGCTGCGTaGGCCAGAAATATGGCGTCTGAAATCGGTAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: WRSLCLQLATAA*ARNMASEIGRD Trigger: GTCTCTACCGATTTCAGACGCCATATTTCTGGCCCACGCAGCAGTGGCCAGCTGAAGACACAGACTACGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
||
| CDS CCA 72 bp | GGTTTTGCCGTCTATGTTGATCCACCGCCTCGCACCTaGGGCCAGGAACAGCTTGTAGATCTCCTCTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GFAVYVDPPPRT*GQEQLVDLLCF Trigger: AAAGCAGAGGAGATCTACAAGCTGTTCCTGGCCCCAGGTGCGAGGCGGTGGATCAACATAGACGGCAAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS CCA 72 bp | TCTGGAAAAAGTTGGCTACTTTCTTGGGTTTCAGCCTaGGCAGCTGTTGGCCCATGTCCCCCAGAGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SGKSWLLSWVSA*AAVGPCPPEAA Trigger: TGCAGCCTCTGGGGGACATGGGCCAACAGCTGCCCAGGCTGAAACCCAAGAAAGTAGCCAACTTTTTCCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS CAA 72 bp | TGCCGACCCTTGGGGTCTCGAATCAGTTCGCTGAAGTaGAAAGCCCATCTCTCCACTCGCATCTTGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: CRPLGSRISSLK*KAHLSTRILVG Trigger: CCCAACCAAGATGCGAGTGGAGAGATGGGCTTTCAACTTCAGCGAACTGATTCGAGACCCCAAGGGTCGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS GCA 72 bp | AGGCAGCCGGACATGATGGCGTCATTGGACGAGAACTaGTCGCTGTACTTGACAATTCCTCCAAGAGACACC | + |
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Preference number: 6 (lower is better) Translates to: RQPDMMASLDEN*SLYLTIPPRDT Trigger: GGTGTCTCTTGGAGGAATTGTCAAGTACAGCGAGCAGTTCTCGTCCAATGACGCCATCATGTCCGGCTGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS CCA 72 bp | CCAGAACTGGGTGTCGTCTGTTATCCAAGGATTGCTTaGAAGGCAGCCGGACATGATGGCGTCATTGGACGA | + |
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Preference number: 6 (lower is better) Translates to: PELGVVCYPRIA*KAAGHDGVIGR Trigger: TCGTCCAATGACGCCATCATGTCCGGCTGCCTTCCAAGCAATCCTTGGATAACAGACGACACCCAGTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS TCA 72 bp | CTGTTATCCAAGGATTGCTTGGAAGGCAGCCGGACATaGTGGCGTCATTGGACGAGAACTGCTCGCTGTACT | + |
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Preference number: 6 (lower is better) Translates to: LLSKDCLEGSRT*WRHWTRTARCT Trigger: AGTACAGCGAGCAGTTCTCGTCCAATGACGCCATCATGTCCGGCTGCCTTCCAAGCAATCCTTGGATAACAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS CCA 72 bp | CAGGACTCTCTGGTTATGCATTCTGACTCCCGTCTCTaGGTTCTGCATGTCCTTCACCAGGGCTTCGATCTT | + |
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Preference number: 6 (lower is better) Translates to: QDSLVMHSDSRL*VLHVLHQGFDL Trigger: AAGATCGAAGCCCTGGTGAAGGACATGCAGAACCCAGAGACGGGAGTCAGAATGCATAACCAGAGAGTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
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| CDS CAA 72 bp | GGATTGCTTGGAAGGCAGCCGGACATGATGGCGTCATaGGACGAGAACTGCTCGCTGTACTTGACAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: GLLGRQPDMMAS*DENCSLYLTIP Trigger: AGGAATTGTCAAGTACAGCGAGCAGTTCTCGTCCAATGACGCCATCATGTCCGGCTGCCTTCCAAGCAATCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS CAA 90 bp | GTTATCCAAGGATTGCTTGGAAGGCAGCCGGACATGATGGCGTCATaGGACGAGAACTGCTCGCTGTACTTGACAATTCCTCCAAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: VIQGLLGRQPDMMAS*DENCSLYLTIPPRD Trigger: GTCTCTTGGAGGAATTGTCAAGTACAGCGAGCAGTTCTCGTCCAATGACGCCATCATGTCCGGCTGCCTTCCAAGCAATCCTTGGATAAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS CAA 72 bp | AAATCCCAGAACTGGGTGTCGTCTGTTATCCAAGGATaGCTTGGAAGGCAGCCGGACATGATGGCGTCATTG | + |
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Preference number: 6 (lower is better) Translates to: KSQNWVSSVIQG*LGRQPDMMASL Trigger: CAATGACGCCATCATGTCCGGCTGCCTTCCAAGCAATCCTTGGATAACAGACGACACCCAGTTCTGGGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS CAA 72 bp | TCCTTCTTGAGAAAGTACTGGAAGCTCTGCCGACCCTaGGGGTCTCGAATCAGTTCGCTGAAGTTGAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SFLRKYWKLCRP*GSRISSLKLKA Trigger: GGCTTTCAACTTCAGCGAACTGATTCGAGACCCCAAGGGTCGGCAGAGCTTCCAGTACTTTCTCAAGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS CAA 90 bp | TTGGCATTTAAATCCCAGAACTGGGTGTCGTCTGTTATCCAAGGATaGCTTGGAAGGCAGCCGGACATGATGGCGTCATTGGACGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: LAFKSQNWVSSVIQG*LGRQPDMMASLDEN Trigger: GTTCTCGTCCAATGACGCCATCATGTCCGGCTGCCTTCCAAGCAATCCTTGGATAACAGACGACACCCAGTTCTGGGATTTAAATGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS CAA 90 bp | CAGGTCCCACTGTCTGTAGGCATTTCCATTTTGATCTGGAAAAAGTaGGCTACTTTCTTGGGTTTCAGCCTGGGCAGCTGTTGGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: QVPLSVGISILIWKK*ATFLGFSLGSCWPM Trigger: CATGGGCCAACAGCTGCCCAGGCTGAAACCCAAGAAAGTAGCCAACTTTTTCCAGATCAAAATGGAAATGCCTACAGACAGTGGGACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS CAA 90 bp | TCCGAGTCCATCAGGCAGGTCCCACTGTCTGTAGGCATTTCCATTTaGATCTGGAAAAAGTTGGCTACTTTCTTGGGTTTCAGCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SESIRQVPLSVGISI*IWKKLATFLGFSLG Trigger: GCCCAGGCTGAAACCCAAGAAAGTAGCCAACTTTTTCCAGATCAAAATGGAAATGCCTACAGACAGTGGGACCTGCCTGATGGACTCGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS GCA 72 bp | GTAGCCATACTTGACAATAAAGTTGCCCAGGTTCTGTaGCTCCAGGTTAGAGATCCAAAGGCGCTGGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: VAILDNKVAQVL*LQVRDPKALGD Trigger: ATCACCCAGCGCCTTTGGATCTCTAACCTGGAGGCACAGAACCTGGGCAACTTTATTGTCAAGTATGGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
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| CDS CCA 72 bp | ACAATGGTCAGTGTGCACACACAGGAGAAAGAGAGCTaGTTTACCTTAACTTCGTTTGGATTGGTCACGCGG | + |
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Preference number: 6 (lower is better) Translates to: TMVSVHTQEKES*FTLTSFGLVTR Trigger: CCGCGTGACCAATCCAAACGAAGTTAAGGTAAACCAGCTCTCTTTCTCCTGTGTGTGCACACTGACCATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106704.3 |
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| CDS CAA 90 bp | TCGGTAGAGACTGCTGTCCGGCTTGAGGATGAGATTCTTGGGGTCTaGCAAAGGATAGATGTAGCCATACTTGACAATAAAGTTGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SVETAVRLEDEILGV*QRIDVAILDNKVAQ Trigger: CTGGGCAACTTTATTGTCAAGTATGGCTACATCTATCCTTTGCAAGACCCCAAGAATCTCATCCTCAAGCCGGACAGCAGTCTCTACCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
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| CDS CAA 90 bp | GGCCTGTTGGTAATACATGATCTCTTTTCTGACAGCAGTGACAGTTaGTTTCTTAACTTCGTTTGGATTGGTCACGCGGTCCAGGCCGTA | + |
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Preference number: 6 (lower is better) Translates to: GLLVIHDLFSDSSDS*FLNFVWIGHAVQAV Trigger: TACGGCCTGGACCGCGTGACCAATCCAAACGAAGTTAAGAAACAAACTGTCACTGCTGTCAGAAAAGAGATCATGTATTACCAACAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000106706.8 |
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| CDS CCA 72 bp | GGGATCTCCACCAATTTGGCATTTAAATCCCAGAACTaGGTGTCGTCTGTTATCCAAGGATTGCTTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GISTNLAFKSQN*VSSVIQGLLGR Trigger: CCTTCCAAGCAATCCTTGGATAACAGACGACACCCAGTTCTGGGATTTAAATGCCAAATTGGTGGAGATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS CAA 72 bp | TCGCTGAAGTTGAAAGCCCATCTCTCCACTCGCATCTaGGTTGGGATCTCCACCAATTTGGCATTTAAATCC | + |
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Preference number: 6 (lower is better) Translates to: SLKLKAHLSTRI*VGISTNLAFKS Trigger: GGATTTAAATGCCAAATTGGTGGAGATCCCAACCAAGATGCGAGTGGAGAGATGGGCTTTCAACTTCAGCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS CAA 72 bp | ATTTCCATTTTGATCTGGAAAAAGTTGGCTACTTTCTaGGGTTTCAGCCTGGGCAGCTGTTGGCCCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: ISILIWKKLATF*GFSLGSCWPMS Trigger: GGACATGGGCCAACAGCTGCCCAGGCTGAAACCCAAGAAAGTAGCCAACTTTTTCCAGATCAAAATGGAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS CCA 72 bp | CAGGTCCCACTGTCTGTAGGCATTTCCATTTTGATCTaGAAAAAGTTGGCTACTTTCTTGGGTTTCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: QVPLSVGISILI*KKLATFLGFSL Trigger: CAGGCTGAAACCCAAGAAAGTAGCCAACTTTTTCCAGATCAAAATGGAAATGCCTACAGACAGTGGGACCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS TCA 72 bp | GAGATTTCAAATAGCGTGCGTAAGAATCCTTCTTCATaGGCATGTAAATGTGGGTCTGCGCTGCATCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: EISNSVRKNPSS*ACKCGSALHPV Trigger: TACTGGATGCAGCGCAGACCCACATTTACATGCTCATGAAGAAGGATTCTTACGCACGCTATTTGAAATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 ENSMUST00000106706.8 |
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| CDS CAA 72 bp | ACTGCTGTCCGGCTTGAGGATGAGATTCTTGGGGTCTaGCAAAGGATAGATGTAGCCATACTTGACAATAAA | + |
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Preference number: 6 (lower is better) Translates to: TAVRLEDEILGV*QRIDVAILDNK Trigger: TTTATTGTCAAGTATGGCTACATCTATCCTTTGCAAGACCCCAAGAATCTCATCCTCAAGCCGGACAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020920.10 ENSMUST00000106704.3 ENSMUST00000106706.8 |
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| CDS CAA 72 bp | ATCAGGCAGGTCCCACTGTCTGTAGGCATTTCCATTTaGATCTGGAAAAAGTTGGCTACTTTCTTGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: IRQVPLSVGISI*IWKKLATFLGF Trigger: GAAACCCAAGAAAGTAGCCAACTTTTTCCAGATCAAAATGGAAATGCCTACAGACAGTGGGACCTGCCTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000103062.9 |
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| CDS CAA 72 bp | GTAATACATGATCTCTTTTCTGACAGCAGTGACAGTTaGTTTCTTAACTTCGTTTGGATTGGTCACGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: VIHDLFSDSSDS*FLNFVWIGHAV Trigger: GACCGCGTGACCAATCCAAACGAAGTTAAGAAACAAACTGTCACTGCTGTCAGAAAAGAGATCATGTATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020920.10 ENSMUST00000106706.8 |
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