Pregenerated sensors for RGS7BP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021719Ensembl transcript IDs: ENSMUST00000063551.7
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGAGCAGAACTTTATCTGGTGGACCCACACCTAAGGAAGTCCTTTaGCAGGTTAGAGGAGAGAGGGGCATCCTAGAGGATGCACTTGGC | + |
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Preference number: 1 (lower is better) Translates to: GSRTLSGGPTPKEVL*QVRGERGILEDALG Trigger: GCCAAGTGCATCCTCTAGGATGCCCCTCTCTCCTCTAACCTGCCAAAGGACTTCCTTAGGTGTGGGTCCACCAGATAAAGTTCTGCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR TCA 90 bp | TCAGCGTTTTCCTCAGACCCTTACAGATCAGCTGGATGCTTCTGTTaGGGGCAAAGACCATTTCCTGCAAGGAGCAGAGGGAGGGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: SAFSSDPYRSAGCFC*GQRPFPARSRGREQ Trigger: CTGCTCCCTCCCTCTGCTCCTTGCAGGAAATGGTCTTTGCCCTCAACAGAAGCATCCAGCTGATCTGTAAGGGTCTGAGGAAAACGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR GCA 90 bp | TTACAGATCAGCTGGATGCTTCTGTTGAGGGCAAAGACCATTTCCTaGAAGGAGCAGAGGGAGGGAGCAGAACTTTATCTGGTGGACCCA | + |
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Preference number: 1 (lower is better) Translates to: LQISWMLLLRAKTIS*KEQREGAELYLVDP Trigger: TGGGTCCACCAGATAAAGTTCTGCTCCCTCCCTCTGCTCCTTGCAGGAAATGGTCTTTGCCCTCAACAGAAGCATCCAGCTGATCTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR CCA 90 bp | TGTGAGAGAATATTCAGCGTTTTCCTCAGACCCTTACAGATCAGCTaGATGCTTCTGTTGAGGGCAAAGACCATTTCCTGCAAGGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: CERIFSVFLRPLQIS*MLLLRAKTISCKEQ Trigger: CTGCTCCTTGCAGGAAATGGTCTTTGCCCTCAACAGAAGCATCCAGCTGATCTGTAAGGGTCTGAGGAAAACGCTGAATATTCTCTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR TCA 90 bp | GGGGAAAGCACAGGTCTTGTAAATCATAGAGACTTCCCAAAGTGCTaGGGTCCTTCACGTAGTAGAGGCCTAATCTCTTTCTTGCATGCA | + |
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Preference number: 1 (lower is better) Translates to: GESTGLVNHRDFPKC*GPSRSRGLISFLHA Trigger: TGCATGCAAGAAAGAGATTAGGCCTCTACTACGTGAAGGACCTCAGCACTTTGGGAAGTCTCTATGATTTACAAGACCTGTGCTTTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR GCA 90 bp | CAGAACAACACAGCGTGTGGCTCCCTCTTTTCTAAAATACAGTATTaGTTAATGTGTCCCGTTCTCGAGAGTCCAAGCATAAGACAGGAC | + |
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Preference number: 1 (lower is better) Translates to: QNNTACGSLFSKIQY*LMCPVLESPSIRQD Trigger: GTCCTGTCTTATGCTTGGACTCTCGAGAACGGGACACATTAAGCAATACTGTATTTTAGAAAAGAGGGAGCCACACGCTGTGTTGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR TCA 90 bp | GGGAAGGGGTTTAAGCTGCATGATAATTCTTTATTCTCACAACCCTaGGACTTTCACAGTCTGGAAGTCGTCATGGGCTCCTTGTTAATG | + |
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Preference number: 1 (lower is better) Translates to: GKGFKLHDNSLFSQP*DFHSLEVVMGSLLM Trigger: CATTAACAAGGAGCCCATGACGACTTCCAGACTGTGAAAGTCTCAGGGTTGTGAGAATAAAGAATTATCATGCAGCTTAAACCCCTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR TCA 90 bp | CAGAATGGAAGACTAAATGGAAATGAGTGCAGAGACAGCAACGCGTaGGGTGGCGTGTGTTTGGTTATAATATTTCTAATGATACTCATA | + |
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Preference number: 1 (lower is better) Translates to: QNGRLNGNECRDSNA*GGVCLVIIFLMILI Trigger: TATGAGTATCATTAGAAATATTATAACCAAACACACGCCACCTCACGCGTTGCTGTCTCTGCACTCATTTCCATTTAGTCTTCCATTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR TCA 90 bp | ATTGGATCTATCATGGGTGATGTAGCTGCTTGTGAGAATTTACTGTaGGACCGGCATAGTATGACTGCTTTTCTGTATTCTATCTATAGT | + |
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Preference number: 1 (lower is better) Translates to: IGSIMGDVAACENLL*DRHSMTAFLYSIYS Trigger: ACTATAGATAGAATACAGAAAAGCAGTCATACTATGCCGGTCTCACAGTAAATTCTCACAAGCAGCTACATCACCCATGATAGATCCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR TCA 90 bp | ATCTATGGGAACTATAAAATTGAGCAATGGCTGGAAACCAGGCACTaGATAAAACATAAGGTGGTCGACTTTATTACCTCAGATATGCAA | + |
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Preference number: 1 (lower is better) Translates to: IYGNYKIEQWLETRH*IKHKVVDFITSDMQ Trigger: TTGCATATCTGAGGTAATAAAGTCGACCACCTTATGTTTTATTCAGTGCCTGGTTTCCAGCCATTGCTCAATTTTATAGTTCCCATAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR GCA 90 bp | ATGTTTATATTTCAAACTTCCTCAAGGTTCCCAGAAGCTTATATATaGACATGTCTGTCTGAGTTGTTTGTATCTGAACTTTTGGCCACT | + |
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Preference number: 1 (lower is better) Translates to: MFIFQTSSRFPEAYI*TCLSELFVSELLAT Trigger: AGTGGCCAAAAGTTCAGATACAAACAACTCAGACAGACATGTGCATATATAAGCTTCTGGGAACCTTGAGGAAGTTTGAAATATAAACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR CAA 90 bp | AGGTTTAGGTCGGGCATCCACAAGAGCGTGCCCCGCACCCCAGGCTaGTCAGTTAGTCCATTTGCATGGATTGCTAGGAATGAGGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: RFRSGIHKSVPRTPG*SVSPFAWIARNEAE Trigger: TTCAGCCTCATTCCTAGCAATCCATGCAAATGGACTAACTGACAAGCCTGGGGTGCGGGGCACGCTCTTGTGGATGCCCGACCTAAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR GCA 90 bp | GATGCTTCTGTTGAGGGCAAAGACCATTTCCTGCAAGGAGCAGAGGGAGGGAGCGGGCATCCTAGAGGATaGACTTGGCATATCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: DASVEGKDHFLQGAEGGSGHPRG*TWHILQ Trigger: CTGGAGGATATGCCAAGTGCATCCTCTAGGATGCCC...GCTCCCTCCCTCTGCTCCTTGCAGGAAATGGTCTTTGCCCTCAACAGAAGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR CAA 90 bp | GCGTGCCCCGCACCCCAGGCTTGTCAGTTAGTCCATTTGCATGGATaGCTAGGAATGAGGCTGAAGCTAAGCGTTCAATCCAGTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: ACPAPQACQLVHLHG*LGMRLKLSVQSSQS Trigger: ACTCTGACTGGATTGAACGCTTAGCTTCAGCCTCATTCCTAGCAATCCATGCAAATGGACTAACTGACAAGCCTGGGGTGCGGGGCACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR TCA 90 bp | GCAGAACTTTATCTGGTGGACCCACACCTAAGGAAGTCCTTTGGCAGGTTAGAGAAATTCCCATCTCCATaGATAGCTCTCACGGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: AELYLVDPHLRKSFGRLEKFPSP*IALTAF Trigger: GAAGGCCGTGAGAGCTATTCATGGAGATGGGAATTT...CTCTAACCTGCCAAAGGACTTCCTTAGGTGTGGGTCCACCAGATAAAGTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CCA 90 bp | GCAGAACTTTATCTGGTGGACCCACACCTAAGGAAGTCCTTTGGCAGGTTAGAGAAATTTCATTGGGGGTaGGGGGAAGGGTCAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: AELYLVDPHLRKSFGRLEKFHWG*GEGSKE Trigger: TTCCTTTGACCCTTCCCCCCACCCCCAATGAAATTT...CTCTAACCTGCCAAAGGACTTCCTTAGGTGTGGGTCCACCAGATAAAGTTCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CCA 90 bp | CCAAAACCAATTAGGACCCTGCTGCTTCTCCAGCTTGCTTTGTACCCCTTTAATAGTAAGGGGTGGGGGTaGGGTACCAAGAATATGGTC | + |
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Preference number: 2 (lower is better) Translates to: PKPIRTLLLLQLALYPFNSKGWG*GTKNMV Trigger: GACCATATTCTTGGTACCCCACCCCCACCCCTTACT...ATTAAAGGGGTACAAAGCAAGCTGGAGAAGCAGCAGGGTCCTAATTGGTTTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR TCA 90 bp | GCAGAACTTTATCTGGTGGACCCACACCTAAGGAAGTCCTTTGGCAGGTTAGAGCTGGAAACCAGGCACTaGATAAAACATAAGGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: AELYLVDPHLRKSFGRLELETRH*IKHKVV Trigger: GACCACCTTATGTTTTATTCAGTGCCTGGTTTCCAG...CTCTAACCTGCCAAAGGACTTCCTTAGGTGTGGGTCCACCAGATAAAGTTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR GCA 90 bp | GATGCTTCTGTTGAGGGCAAAGACCATTTCCTGCAAGGAGCAGAGGGAGGGAGCGAGCTAATTCCAGCATaGCCTATAAGATTTAACACT | + |
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Preference number: 2 (lower is better) Translates to: DASVEGKDHFLQGAEGGSELIPA*PIRFNT Trigger: AGTGTTAAATCTTATAGGGCATGCTGGAATTAGCTC...GCTCCCTCCCTCTGCTCCTTGCAGGAAATGGTCTTTGCCCTCAACAGAAGCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CCA 90 bp | GCAGAACTTTATCTGGTGGACCCACACCTAAGGAAGTCCTTTGGCAGGTTAGAGAAGTGCAAAGACTCCTaGGAAATTTCATTGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: AELYLVDPHLRKSFGRLEKCKDS*EISLGV Trigger: CACCCCCAATGAAATTTCCCAGGAGTCTTTGCACTT...CTCTAACCTGCCAAAGGACTTCCTTAGGTGTGGGTCCACCAGATAAAGTTCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CCA 90 bp | CCAAAACCAATTAGGACCCTGCTGCTTCTCCAGCTTGCTTTGTACCCCTTTAATCCCTTACAGATCAGCTaGATGCTTCTGTTGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: PKPIRTLLLLQLALYPFNPLQIS*MLLLRA Trigger: TGCCCTCAACAGAAGCATCCAGCTGATCTGTAAGGG...ATTAAAGGGGTACAAAGCAAGCTGGAGAAGCAGCAGGGTCCTAATTGGTTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR TCA 90 bp | CCAAAACCAATTAGGACCCTGCTGCTTCTCCAGCTTGCTTTGTACCCCTTTAATGAGAGCTGGGACAAATaGAAGAAGCAGGAGAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: PKPIRTLLLLQLALYPFNESWDK*KKQERF Trigger: AAACCTCTCCTGCTTCTTTCATTTGTCCCAGCTCTC...ATTAAAGGGGTACAAAGCAAGCTGGAGAAGCAGCAGGGTCCTAATTGGTTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CCA 90 bp | CCAAAACCAATTAGGACCCTGCTGCTTCTCCAGCTTGCTTTGTACCCCTTTAATCAGCAACGCGTGAGGTaGCGTGTGTTTGGTTATAAT | + |
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Preference number: 2 (lower is better) Translates to: PKPIRTLLLLQLALYPFNQQRVR*RVFGYN Trigger: ATTATAACCAAACACACGCCACCTCACGCGTTGCTG...ATTAAAGGGGTACAAAGCAAGCTGGAGAAGCAGCAGGGTCCTAATTGGTTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CCA 90 bp | CCAAAACCAATTAGGACCCTGCTGCTTCTCCAGCTTGCTTTGTACCCCTTTAATCACTATGCTGATGTGTaGACCCATGCTTCAGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: PKPIRTLLLLQLALYPFNHYADV*THASGF Trigger: GAAACCTGAAGCATGGGTCCACACATCAGCATAGTG...ATTAAAGGGGTACAAAGCAAGCTGGAGAAGCAGCAGGGTCCTAATTGGTTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CCA 90 bp | CCAAAACCAATTAGGACCCTGCTGCTTCTCCAGCTTGCTTTGTACCCCTTTAATGGGGTACCAAGAATATaGTCGACAGCAACTAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: PKPIRTLLLLQLALYPFNGVPRI*STATSG Trigger: TCCACTAGTTGCTGTCGACCATATTCTTGGTACCCC...ATTAAAGGGGTACAAAGCAAGCTGGAGAAGCAGCAGGGTCCTAATTGGTTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CCA 90 bp | GCAGAACTTTATCTGGTGGACCCACACCTAAGGAAGTCCTTTGGCAGGTTAGAGGTTAGTCCATTTGCATaGATTGCTAGGAATGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: AELYLVDPHLRKSFGRLEVSPFA*IARNEA Trigger: AGCCTCATTCCTAGCAATCCATGCAAATGGACTAAC...CTCTAACCTGCCAAAGGACTTCCTTAGGTGTGGGTCCACCAGATAAAGTTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR TCA 90 bp | CCAAAACCAATTAGGACCCTGCTGCTTCTCCAGCTTGCTTTGTACCCCTTTAATGATTTAACACTATGCTaGTGTGTGGACCCATGCTTC | + |
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Preference number: 2 (lower is better) Translates to: PKPIRTLLLLQLALYPFNDLTLC*CVDPCF Trigger: GAAGCATGGGTCCACACATCAGCATAGTGTTAAATC...ATTAAAGGGGTACAAAGCAAGCTGGAGAAGCAGCAGGGTCCTAATTGGTTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CCA 90 bp | GATGGCAGGATAGGAGAGTTGGGAATAGTTCCTTGTGAGGAGTCTTTAAATAATGCATCTGTCACGGCATaGTTCAGAGCAGACATGCAC | + |
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Preference number: 2 (lower is better) Translates to: DGRIGELGIVPCEESLNNASVTA*FRADMH Trigger: GTGCATGTCTGCTCTGAACCATGCCGTGACAGATGC...ATTATTTAAAGACTCCTCACAAGGAACTATTCCCAACTCTCCTATCCTGCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CCA 90 bp | CCAAAACCAATTAGGACCCTGCTGCTTCTCCAGCTTGCTTTGTACCCCTTTAATAGGCTTTATTCAAGATaGCAGGATAGGAGAGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: PKPIRTLLLLQLALYPFNRLYSR*QDRRVG Trigger: CCCAACTCTCCTATCCTGCCATCTTGAATAAAGCCT...ATTAAAGGGGTACAAAGCAAGCTGGAGAAGCAGCAGGGTCCTAATTGGTTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CCA 90 bp | CCAAAACCAATTAGGACCCTGCTGCTTCTCCAGCTTGCTTTGTACCCCTTTAATAACATCCATAGATCTTaGAGTATATCTATCTATGGG | + |
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Preference number: 2 (lower is better) Translates to: PKPIRTLLLLQLALYPFNNIHRS*SISIYG Trigger: CCCATAGATAGATATACTCCAAGATCTATGGATGTT...ATTAAAGGGGTACAAAGCAAGCTGGAGAAGCAGCAGGGTCCTAATTGGTTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR TCA 90 bp | CTGAACTTTTGGCCACTAGTCTATTCAAATATGTTCAATGCTATCTGTGGATTACAGGTACCAGAACCTTaGTTGTTAATGCTGCTTTCG | + |
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Preference number: 2 (lower is better) Translates to: LNFWPLVYSNMFNAICGLQVPEP*LLMLLS Trigger: CGAAAGCAGCATTAACAATCAAGGTTCTGGTACCTG...TAATCCACAGATAGCATTGAACATATTTGAATAGACTAGTGGCCAAAAGTTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR CAA 90 bp | TCAATGCTATCTGTGGATTACCTTAGTGTACAGTGCATTATTACCTaGAATCCTGATCTCAAACGGGAAAGTTTGATATTTTTCTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: SMLSVDYLSVQCIIT*NPDLKRESLIFFSL Trigger: GAGGGAGAAAAATATCAAACTTTCCCGTTTGAGATCAGGATTCAAGGTAATAATGCACTGTACACTAAGGTAATCCACAGATAGCATTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR TCA 90 bp | CTGAACTTTTGGCCACTAGTCTATTCAAATATGTTCAATGCTATCTGTGGATTACAGGCTGCACCTCTTTaGATCTGTTCTTTCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LNFWPLVYSNMFNAICGLQAAPL*ICSFFL Trigger: AAGAAAGAAAGAACAGATTCAAAGAGGTGCAGCCTG...TAATCCACAGATAGCATTGAACATATTTGAATAGACTAGTGGCCAAAAGTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR GCA 90 bp | GATGGCAGGATAGGAGAGTTGGGAATAGTTCCTTGTGAGGAGTCTTTAAATAATTCTAAAATACAGTATTaGTTAATGTGTCCCGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: DGRIGELGIVPCEESLNNSKIQY*LMCPVL Trigger: GAGAACGGGACACATTAAGCAATACTGTATTTTAGA...ATTATTTAAAGACTCCTCACAAGGAACTATTCCCAACTCTCCTATCCTGCCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR TCA 90 bp | ATTCAACCTAATACAACAATTGTCCATGCTCTCTCCATCTTCCATAAAGTGAAAAATAGTTTTATGATCTaGGCTAATTCCAGCATGCCC | + |
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Preference number: 2 (lower is better) Translates to: IQPNTTIVHALSIFHKVKNSFMI*ANSSMP Trigger: GGGCATGCTGGAATTAGCTCAGATCATAAAACTATT...TTTCACTTTATGGAAGATGGAGAGAGCATGGACAATTGTTGTATTAGGTTGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR TCA 90 bp | CTGAACTTTTGGCCACTAGTCTATTCAAATATGTTCAATGCTATCTGTGGATTATTAACTAACTTGAAATaGCCTGCAACCAGGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: LNFWPLVYSNMFNAICGLLTNLK*PATRRE Trigger: TTCTCTCCTGGTTGCAGGTCATTTCAAGTTAGTTAA...TAATCCACAGATAGCATTGAACATATTTGAATAGACTAGTGGCCAAAAGTTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR CAA 90 bp | GCTTATATATGCACATGTCTGTCTGAGTTGTTTGTATCTGAACTTTaGGCCACTAGTCTATTCAAATATGTTCAATGCTATCTGTGGATT | + |
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Preference number: 2 (lower is better) Translates to: AYICTCLSELFVSEL*ATSLFKYVQCYLWI Trigger: AATCCACAGATAGCATTGAACATATTTGAATAGACTAGTGGCCAAAAGTTCAGATACAAACAACTCAGACAGACATGTGCATATATAAGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CCA 90 bp | CTGAACTTTTGGCCACTAGTCTATTCAAATATGTTCAATGCTATCTGTGGATTATGCTTTCTTTATACGTaGGGATGTTTTTCAGATTTC | + |
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Preference number: 2 (lower is better) Translates to: LNFWPLVYSNMFNAICGLCFLYT*GCFSDF Trigger: GAAATCTGAAAAACATCCCCACGTATAAAGAAAGCA...TAATCCACAGATAGCATTGAACATATTTGAATAGACTAGTGGCCAAAAGTTCAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CCA 90 bp | CTGAACTTTTGGCCACTAGTCTATTCAAATATGTTCAATGCTATCTGTGGATTATTTAAAGAGATACTTTaGCCTGAAGGTTACTTCATG | + |
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Preference number: 2 (lower is better) Translates to: LNFWPLVYSNMFNAICGLFKEIL*PEGYFM Trigger: CATGAAGTAACCTTCAGGCCAAAGTATCTCTTTAAA...TAATCCACAGATAGCATTGAACATATTTGAATAGACTAGTGGCCAAAAGTTCAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR CCA 72 bp | CCCCGCACCCCAGGCTTGTCAGTTAGTCCATTTGCATaGATTGCTAGGAATGAGGCTGAAGCTAAGCGTTCA | + |
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Preference number: 3 (lower is better) Translates to: PRTPGLSVSPFA*IARNEAEAKRS Trigger: TGAACGCTTAGCTTCAGCCTCATTCCTAGCAATCCATGCAAATGGACTAACTGACAAGCCTGGGGTGCGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CAA 90 bp | GATGCTTCTGTTGAGGGCAAAGACCATTTCCTGCAAGGAGCAGAGGGAGGGAGCGTCCATTTGCATGGATaGCTAGGAATGAGGCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: DASVEGKDHFLQGAEGGSVHLHG*LGMRLK Trigger: CTTCAGCCTCATTCCTAGCAATCCATGCAAATGGAC...GCTCCCTCCCTCTGCTCCTTGCAGGAAATGGTCTTTGCCCTCAACAGAAGCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR TCA 72 bp | CAAGGCAACCATGAGCCCGCACAGGTACCAGAACCTTaGTTGTTAATGCTGCTTTCGGACCTGCTACTGAAA | + |
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Preference number: 3 (lower is better) Translates to: QGNHEPAQVPEP*LLMLLSDLLLK Trigger: TTTCAGTAGCAGGTCCGAAAGCAGCATTAACAATCAAGGTTCTGGTACCTGTGCGGGCTCATGGTTGCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CAA 90 bp | GATGCTTCTGTTGAGGGCAAAGACCATTTCCTGCAAGGAGCAGAGGGAGGGAGCACCCATATGCATTGTTaGAAGATAGTAGGATTACTG | + |
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Preference number: 3 (lower is better) Translates to: DASVEGKDHFLQGAEGGSTHMHC*KIVGLL Trigger: CAGTAATCCTACTATCTTCAAACAATGCATATGGGT...GCTCCCTCCCTCTGCTCCTTGCAGGAAATGGTCTTTGCCCTCAACAGAAGCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR CCA 72 bp | ATATTCAGCGTTTTCCTCAGACCCTTACAGATCAGCTaGATGCTTCTGTTGAGGGCAAAGACCATTTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: IFSVFLRPLQIS*MLLLRAKTISC Trigger: GCAGGAAATGGTCTTTGCCCTCAACAGAAGCATCCAGCTGATCTGTAAGGGTCTGAGGAAAACGCTGAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR GCA 72 bp | TGCTTAGGCACGGATGTGTGGGGAAGGGGTTTAAGCTaGATGATAATTCTTTATTCTCACAACCCTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: CLGTDVWGRGLS*MIILYSHNPET Trigger: AGTCTCAGGGTTGTGAGAATAAAGAATTATCATGCAGCTTAAACCCCTTCCCCACACATCCGTGCCTAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR-3UTR CAA 90 bp | ATTCAACCTAATACAACAATTGTCCATGCTCTCTCCATCTTCCATAAAGTGAAAGTTTCTCAGGTGATCTaGGCGGTGAGTTTCCGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: IQPNTTIVHALSIFHKVKVSQVI*AVSFRG Trigger: TCCCCGGAAACTCACCGCCAAGATCACCTGAGAAAC...TTTCACTTTATGGAAGATGGAGAGAGCATGGACAATTGTTGTATTAGGTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAACCAATTAGGACCCTGCTGCTTCTCCAGCTTGCTTTGTACCCCTTTAATATGGGAACTATAAAATaGAGCAATGGCTGGAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: PKPIRTLLLLQLALYPFNMGTIK*SNGWKP Trigger: TGGTTTCCAGCCATTGCTCAATTTTATAGTTCCCAT...ATTAAAGGGGTACAAAGCAAGCTGGAGAAGCAGCAGGGTCCTAATTGGTTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR TCA 72 bp | TTTAAGCTGCATGATAATTCTTTATTCTCACAACCCTaGGACTTTCACAGTCTGGAAGTCGTCATGGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FKLHDNSLFSQP*DFHSLEVVMGS Trigger: GGAGCCCATGACGACTTCCAGACTGTGAAAGTCTCAGGGTTGTGAGAATAAAGAATTATCATGCAGCTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR CCA 72 bp | TCAATGCATACATGTGTAGGTATGTTGGTAAGAGGGTaGCTCTCGAGAAACTCTCTTATGACCTCCTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SMHTCVGMLVRG*LSRNSLMTSSF Trigger: AAAAGAGGAGGTCATAAGAGAGTTTCTCGAGAGCCACCCTCTTACCAACATACCTACACATGTATGCATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAACCTAATACAACAATTGTCCATGCTCTCTCCATCTTCCATAAAGTGAAACTGTCCCTCTTAAGATaGGACACCTGTGCCTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: IQPNTTIVHALSIFHKVKLSLLR*DTCASG Trigger: ACCAGAGGCACAGGTGTCCAATCTTAAGAGGGACAG...TTTCACTTTATGGAAGATGGAGAGAGCATGGACAATTGTTGTATTAGGTTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR TCA 72 bp | AGACTAAATGGAAATGAGTGCAGAGACAGCAACGCGTaGGGTGGCGTGTGTTTGGTTATAATATTTCTAATG | + |
|
Preference number: 3 (lower is better) Translates to: RLNGNECRDSNA*GGVCLVIIFLM Trigger: CATTAGAAATATTATAACCAAACACACGCCACCTCACGCGTTGCTGTCTCTGCACTCATTTCCATTTAGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR TCA 72 bp | ATCATGGGTGATGTAGCTGCTTGTGAGAATTTACTGTaGGACCGGCATAGTATGACTGCTTTTCTGTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: IMGDVAACENLL*DRHSMTAFLYS Trigger: AGAATACAGAAAAGCAGTCATACTATGCCGGTCTCACAGTAAATTCTCACAAGCAGCTACATCACCCATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR CCA 72 bp | TTTGCAATGAGTCTGAGTCTAGACACCAAACATCAGTaGTCAGACTTTAAAGAGATACTTTGGCCTGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: FAMSLSLDTKHQ*SDFKEILWPEG Trigger: ACCTTCAGGCCAAAGTATCTCTTTAAAGTCTGACCACTGATGTTTGGTGTCTAGACTCAGACTCATTGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR TCA 72 bp | CTGCTTGTGAGAATTTACTGTGAGACCGGCATAGTATaGCTGCTTTTCTGTATTCTATCTATAGTTACGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLVRIYCETGIV*LLFCILSIVTG Trigger: TCCCGTAACTATAGATAGAATACAGAAAAGCAGTCATACTATGCCGGTCTCACAGTAAATTCTCACAAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR CCA 72 bp | ACCAAACATCAGTGGTCAGACTTTAAAGAGATACTTTaGCCTGAAGGTTACTTCATGTTGTCTTTCCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TKHQWSDFKEIL*PEGYFMLSFPK Trigger: TTTTGGGAAAGACAACATGAAGTAACCTTCAGGCCAAAGTATCTCTTTAAAGTCTGACCACTGATGTTTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR TCA 72 bp | AACTATAAAATTGAGCAATGGCTGGAAACCAGGCACTaGATAAAACATAAGGTGGTCGACTTTATTACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: NYKIEQWLETRH*IKHKVVDFITS Trigger: TGAGGTAATAAAGTCGACCACCTTATGTTTTATTCAGTGCCTGGTTTCCAGCCATTGCTCAATTTTATAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR GCA 72 bp | TTTCAAACTTCCTCAAGGTTCCCAGAAGCTTATATATaGACATGTCTGTCTGAGTTGTTTGTATCTGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: FQTSSRFPEAYI*TCLSELFVSEL Trigger: AAGTTCAGATACAAACAACTCAGACAGACATGTGCATATATAAGCTTCTGGGAACCTTGAGGAAGTTTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR CCA 72 bp | ATCATCTACTCATTCGATAACCGTGTTTTCAGTATTTaGTTTGTATATGGCACTATCTTAGGAGCCGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: IIYSFDNRVFSI*FVYGTILGAEK Trigger: TTTCTCGGCTCCTAAGATAGTGCCATATACAAACCAAATACTGAAAACACGGTTATCGAATGAGTAGATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGAACTTTTGGCCACTAGTCTATTCAAATATGTTCAATGCTATCTGTGGATTAGAAGGTTACTTCATGTaGTCTTTCCCAAAAGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LNFWPLVYSNMFNAICGLEGYFM*SFPKES Trigger: AGACTCTTTTGGGAAAGACAACATGAAGTAACCTTC...TAATCCACAGATAGCATTGAACATATTTGAATAGACTAGTGGCCAAAAGTTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGAACTTTTGGCCACTAGTCTATTCAAATATGTTCAATGCTATCTGTGGATTAGACACAGAATACACATaGGAAAAGTCATATCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LNFWPLVYSNMFNAICGLDTEYT*EKSYLH Trigger: ATGCAGATATGACTTTTCCAATGTGTATTCTGTGTC...TAATCCACAGATAGCATTGAACATATTTGAATAGACTAGTGGCCAAAAGTTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR TCA 72 bp | TTCCCCACAATAAGACACTATCTTCACCAATCGGGATaGCAAGTATTCTTCATTTTTGTCATTCATTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: FPTIRHYLHQSG*QVFFIFVIHSH Trigger: ATGAGAATGAATGACAAAAATGAAGAATACTTGTCATCCCGATTGGTGAAGATAGTGTCTTATTGTGGGGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR GCA 72 bp | GAACTTTTGGCCACTAGTCTATTCAAATATGTTCAATaGTATCTGTGGATTACCTTAGTGTACAGTGCATTA | + |
|
Preference number: 3 (lower is better) Translates to: ELLATSLFKYVQ*YLWITLVYSAL Trigger: TAATGCACTGTACACTAAGGTAATCCACAGATAGCATTGAACATATTTGAATAGACTAGTGGCCAAAAGTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR TCA 72 bp | GATCTCAAACGGGAAAGTTTGATATTTTTCTCCCTCTaGATCACAAAATATTATTTATGGCATCCACTCATC | + |
|
Preference number: 3 (lower is better) Translates to: DLKRESLIFFSL*ITKYYLWHPLI Trigger: GATGAGTGGATGCCATAAATAATATTTTGTGATTCAGAGGGAGAAAAATATCAAACTTTCCCGTTTGAGATC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR TCA 90 bp | GATGCTTCTGTTGAGGGCAAAGACCATTTCCTGCAAGGAGCAGAGGGAGGGAGCGCTCTCGAGAGGGGATaGCAAGGAGTCCTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DASVEGKDHFLQGAEGGSALERG*QGVLQG Trigger: GCCCTGGAGGACTCCTTGTCATCCCCTCTCGAGAGC...GCTCCCTCCCTCTGCTCCTTGCAGGAAATGGTCTTTGCCCTCAACAGAAGCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR TCA 90 bp | GATGCTTCTGTTGAGGGCAAAGACCATTTCCTGCAAGGAGCAGAGGGAGGGAGCGCAGCGGAGGTTTGCTaGTCTGGAAGATCGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DASVEGKDHFLQGAEGGSAAEVC*SGRSRS Trigger: GCTCCTCGATCTTCCAGATCAGCAAACCTCCGCTGC...GCTCCCTCCCTCTGCTCCTTGCAGGAAATGGTCTTTGCCCTCAACAGAAGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR CAA 72 bp | TCGGGCATCCACAAGAGCGTGCCCCGCACCCCAGGCTaGTCAGTTAGTCCATTTGCATGGATTGCTAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SGIHKSVPRTPG*SVSPFAWIARN Trigger: ATTCCTAGCAATCCATGCAAATGGACTAACTGACAAGCCTGGGGTGCGGGGCACGCTCTTGTGGATGCCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR GCA 90 bp | GATGCTTCTGTTGAGGGCAAAGACCATTTCCTGCAAGGAGCAGAGGGAGGGAGCAGCCAGCTTTTGGTGTaGCTGACGGGCCATTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: DASVEGKDHFLQGAEGGSSQLLV*LTGHFT Trigger: TGTGAAATGGCCCGTCAGGCACACCAAAAGCTGGCT...GCTCCCTCCCTCTGCTCCTTGCAGGAAATGGTCTTTGCCCTCAACAGAAGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR CAA 72 bp | AGCCACTTGCAGGCAGCTAGTCTGTCCCTCTTAAGATaGGACACCTGTGCCTCTGGTCTGACTCGGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SHLQAASLSLLR*DTCASGLTRRS Trigger: AGATCTCCGAGTCAGACCAGAGGCACAGGTGTCCAATCTTAAGAGGGACAGACTAGCTGCCTGCAAGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR CCA 90 bp | GCAGAACTTTATCTGGTGGACCCACACCTAAGGAAGTCCTTTGGCAGGTTAGAGTCGTCCAGGGCTCGTTaGGTTTTGTGGGCGCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: AELYLVDPHLRKSFGRLESSRAR*VLWALS Trigger: CGAAAGCGCCCACAAAACCCAACGAGCCCTGGACGA...CTCTAACCTGCCAAAGGACTTCCTTAGGTGTGGGTCCACCAGATAAAGTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR CCA 90 bp | ATTTCTTGCATCTGTCACGGCATGGTTCAGAGCAGACATGCACAATGTCAACTTAGATCGAGGAGCGGGTaGACCGGCTGGGGCGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISCICHGMVQSRHAQCQLRSRSG*TGWGAF Trigger: AAAAGCGCCCCAGCCGGTCCACCCGCTCCTCGATCT...AAGTTGACATTGTGCATGTCTGCTCTGAACCATGCCGTGACAGATGCAAGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR CCA 90 bp | GATGCTTCTGTTGAGGGCAAAGACCATTTCCTGCAAGGAGCAGAGGGAGGGAGCTGCGTGTTGAACTCTTaGACAAGCATCTTGCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: DASVEGKDHFLQGAEGGSCVLNS*TSILQS Trigger: CGACTGCAAGATGCTTGTCCAAGAGTTCAACACGCA...GCTCCCTCCCTCTGCTCCTTGCAGGAAATGGTCTTTGCCCTCAACAGAAGCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR TCA 90 bp | GCAGAACTTTATCTGGTGGACCCACACCTAAGGAAGTCCTTTGGCAGGTTAGAGGGGCCACTTGCGTGTTaGACTCTTGGACAAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: AELYLVDPHLRKSFGRLEGPLAC*TLGQAS Trigger: AGATGCTTGTCCAAGAGTTCAACACGCAAGTGGCCC...CTCTAACCTGCCAAAGGACTTCCTTAGGTGTGGGTCCACCAGATAAAGTTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR GCA 90 bp | ATTTCTTGCATCTGTCACGGCATGGTTCAGAGCAGACATGCACAATGTCAACTTGGCTGGGGCGCTTTTTaGGCCCATTCGGTGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISCICHGMVQSRHAQCQLGWGAF*AHSVQN Trigger: GTTCTGCACCGAATGGGCGCAAAAAGCGCCCCAGCC...AAGTTGACATTGTGCATGTCTGCTCTGAACCATGCCGTGACAGATGCAAGAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR CAA 72 bp | TTCCTCAGACCCTTACAGATCAGCTGGATGCTTCTGTaGAGGGCAAAGACCATTTCCTGCAAGGAGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLRPLQISWMLL*RAKTISCKEQR Trigger: CCTCTGCTCCTTGCAGGAAATGGTCTTTGCCCTCAACAGAAGCATCCAGCTGATCTGTAAGGGTCTGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR TCA 90 bp | CCAAAACCAATTAGGACCCTGCTGCTTCTCCAGCTTGCTTTGTACCCCTTTAATAGCTTTTGGTGTGCCTaGCGGGCCATTTCACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PKPIRTLLLLQLALYPFNSFWCA*RAISQP Trigger: AGGCTGTGAAATGGCCCGTCAGGCACACCAAAAGCT...ATTAAAGGGGTACAAAGCAAGCTGGAGAAGCAGCAGGGTCCTAATTGGTTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR GCA 90 bp | ATTCAACCTAATACAACAATTGTCCATGCTCTCTCCATCTTCCATAAAGTGAAACGGAGCCGCTGCCCCTaGGCTCCCAATCCCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IQPNTTIVHALSIFHKVKRSRCP*APNPRS Trigger: AGAGCGGGGATTGGGAGCGCAGGGGCAGCGGCTCCG...TTTCACTTTATGGAAGATGGAGAGAGCATGGACAATTGTTGTATTAGGTTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR CAA 72 bp | AAACCAATTAGGACCCTGCTGCTTCTCCAGCTTGCTTaGTACCCCTTTAATGAGTGGCACACCGGGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KPIRTLLLLQLA*YPFNEWHTGQF Trigger: AAACTGCCCGGTGTGCCACTCATTAAAGGGGTACAAAGCAAGCTGGAGAAGCAGCAGGGTCCTAATTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR GCA 90 bp | ATTCAACCTAATACAACAATTGTCCATGCTCTCTCCATCTTCCATAAAGTGAAACGCTTTCGGAGCCGCTaGCCCTGCGCTCCCAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: IQPNTTIVHALSIFHKVKRFRSR*PCAPNP Trigger: GGGATTGGGAGCGCAGGGGCAGCGGCTCCGAAAGCG...TTTCACTTTATGGAAGATGGAGAGAGCATGGACAATTGTTGTATTAGGTTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR GCA 90 bp | CCAAAACCAATTAGGACCCTGCTGCTTCTCCAGCTTGCTTTGTACCCCTTTAATCTTGGACAAGCATCTTaGAGTCGTCCAGGGCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PKPIRTLLLLQLALYPFNLGQAS*SRPGLV Trigger: AACGAGCCCTGGACGACTGCAAGATGCTTGTCCAAG...ATTAAAGGGGTACAAAGCAAGCTGGAGAAGCAGCAGGGTCCTAATTGGTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR CCA 90 bp | ATTTCTTGCATCTGTCACGGCATGGTTCAGAGCAGACATGCACAATGTCAACTTCGGCAGATTTCGGGATaGATCTCACCATCTTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ISCICHGMVQSRHAQCQLRQISG*ISPSSG Trigger: CCCGGAAGATGGTGAGATCCATCCCGAAATCTGCCG...AAGTTGACATTGTGCATGTCTGCTCTGAACCATGCCGTGACAGATGCAAGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR CCA 90 bp | ATTCAACCTAATACAACAATTGTCCATGCTCTCTCCATCTTCCATAAAGTGAAAAGCGGGTGGACCGGCTaGGGCGCTTTTTGCGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IQPNTTIVHALSIFHKVKSGWTG*GAFCAH Trigger: ATGGGCGCAAAAAGCGCCCCAGCCGGTCCACCCGCT...TTTCACTTTATGGAAGATGGAGAGAGCATGGACAATTGTTGTATTAGGTTGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR CCA 90 bp | CCAAAACCAATTAGGACCCTGCTGCTTCTCCAGCTTGCTTTGTACCCCTTTAATACCCCAGCAGACAAATaGACTTCAGCATCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKPIRTLLLLQLALYPFNTPADK*TSASLW Trigger: CCACAGAGATGCTGAAGTCCATTTGTCTGCTGGGGT...ATTAAAGGGGTACAAAGCAAGCTGGAGAAGCAGCAGGGTCCTAATTGGTTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR TCA 90 bp | GATGGCAGGATAGGAGAGTTGGGAATAGTTCCTTGTGAGGAGTCTTTAAATAATTTCTCTTCCGTCTTCTaGCCATGGGGTAGGGCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: DGRIGELGIVPCEESLNNFSSVF*PWGRAL Trigger: TAACGCCCTACCCCATGGTCAGAAGACGGAAGAGAA...ATTATTTAAAGACTCCTCACAAGGAACTATTCCCAACTCTCCTATCCTGCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR GCA 90 bp | GATGGCAGGATAGGAGAGTTGGGAATAGTTCCTTGTGAGGAGTCTTTAAATAATCGGTACAGGGCCACTTaGGTGTTGAACTCTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: DGRIGELGIVPCEESLNNRYRAT*VLNSWT Trigger: TGTCCAAGAGTTCAACACGCAAGTGGCCCTGTACCG...ATTATTTAAAGACTCCTCACAAGGAACTATTCCCAACTCTCCTATCCTGCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR GCA 90 bp | GCAGAACTTTATCTGGTGGACCCACACCTAAGGAAGTCCTTTGGCAGGTTAGAGCATTCTCCTCAATTTTaGTGTCCAAATTCTTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AELYLVDPHLRKSFGRLEHSPQF*CPNSSL Trigger: GAGCGAAGAATTTGGACAGCAAAATTGAGGAGAATG...CTCTAACCTGCCAAAGGACTTCCTTAGGTGTGGGTCCACCAGATAAAGTTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR CCA 90 bp | ATTCAACCTAATACAACAATTGTCCATGCTCTCTCCATCTTCCATAAAGTGAAAGCTCGTTGGGTTTTGTaGGCGCTTTCGGAGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IQPNTTIVHALSIFHKVKARWVL*ALSEPL Trigger: CAGCGGCTCCGAAAGCGCCCACAAAACCCAACGAGC...TTTCACTTTATGGAAGATGGAGAGAGCATGGACAATTGTTGTATTAGGTTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR CCA 90 bp | GCAGAACTTTATCTGGTGGACCCACACCTAAGGAAGTCCTTTGGCAGGTTAGAGCCATTTCACAGCCTTTaGTTCTTGTCTTGTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: AELYLVDPHLRKSFGRLEPFHSL*FLSCAF Trigger: AAATGCACAAGACAAGAACCAAAGGCTGTGAAATGG...CTCTAACCTGCCAAAGGACTTCCTTAGGTGTGGGTCCACCAGATAAAGTTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR TCA 90 bp | CTGAACTTTTGGCCACTAGTCTATTCAAATATGTTCAATGCTATCTGTGGATTAACCATCTTCCGGGCCTaGGATGGCAGCCAGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNFWPLVYSNMFNAICGLTIFRA*DGSQLL Trigger: CAAAAGCTGGCTGCCATCTCAGGCCCGGAAGATGGT...TAATCCACAGATAGCATTGAACATATTTGAATAGACTAGTGGCCAAAAGTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR GCA 90 bp | ATTCAACCTAATACAACAATTGTCCATGCTCTCTCCATCTTCCATAAAGTGAAAATATCTGTGGCGACCTaGCAGCACTGCTGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IQPNTTIVHALSIFHKVKISVAT*QHCCWL Trigger: GAGCCAGCAGCAGTGCTGGCAGGTCGCCACAGATAT...TTTCACTTTATGGAAGATGGAGAGAGCATGGACAATTGTTGTATTAGGTTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR CCA 90 bp | ATTTCTTGCATCTGTCACGGCATGGTTCAGAGCAGACATGCACAATGTCAACTTACTTCAGCATCTCTGTaGTGTACATCTCTAGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISCICHGMVQSRHAQCQLTSASL*CTSLGN Trigger: GTTGCCTAGAGATGTACACCACAGAGATGCTGAAGT...AAGTTGACATTGTGCATGTCTGCTCTGAACCATGCCGTGACAGATGCAAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| 3UTR CAA 72 bp | CATTCAGACCCTTCAATGCATACATGTGTAGGTATGTaGGTAAGAGGGTGGCTCTCGAGAAACTCTCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: HSDPSMHTCVGM*VRGWLSRNSLM Trigger: CATAAGAGAGTTTCTCGAGAGCCACCCTCTTACCAACATACCTACACATGTATGCATTGAAGGGTCTGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR CCA 90 bp | ATTCAACCTAATACAACAATTGTCCATGCTCTCTCCATCTTCCATAAAGTGAAAGGAGGTTTGCTGATCTaGAAGATCGAGGAGCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IQPNTTIVHALSIFHKVKGGLLI*KIEERV Trigger: CACCCGCTCCTCGATCTTCCAGATCAGCAAACCTCC...TTTCACTTTATGGAAGATGGAGAGAGCATGGACAATTGTTGTATTAGGTTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR TCA 90 bp | ATTCAACCTAATACAACAATTGTCCATGCTCTCTCCATCTTCCATAAAGTGAAAAGAGGGGCAGCTGACTaGGACGTCCCCAATAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: IQPNTTIVHALSIFHKVKRGAAD*DVPNRN Trigger: ATTTCTATTGGGGACGTCTCAGTCAGCTGCCCCTCT...TTTCACTTTATGGAAGATGGAGAGAGCATGGACAATTGTTGTATTAGGTTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR TCA 90 bp | GATGGCAGGATAGGAGAGTTGGGAATAGTTCCTTGTGAGGAGTCTTTAAATAATAGGCTGCTGTCATCTTaGTTTTTCAGTGGTAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DGRIGELGIVPCEESLNNRLLSS*FFSGKG Trigger: GCCTTTACCACTGAAAAATCAAGATGACAGCAGCCT...ATTATTTAAAGACTCCTCACAAGGAACTATTCCCAACTCTCCTATCCTGCCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS-3UTR GCA 90 bp | GATGGCAGGATAGGAGAGTTGGGAATAGTTCCTTGTGAGGAGTCTTTAAATAATTTGGTTCTTGTCTTGTaGATTTCAGCTCGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DGRIGELGIVPCEESLNNLVLVL*ISARRE Trigger: CTCTCTGCGAGCTGAAATGCACAAGACAAGAACCAA...ATTATTTAAAGACTCCTCACAAGGAACTATTCCCAACTCTCCTATCCTGCCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR CAA 72 bp | TTTAAAGAGATACTTTGGCCTGAAGGTTACTTCATGTaGTCTTTCCCAAAAGAGTCTTTGAGCTCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FKEILWPEGYFM*SFPKESLSSAP Trigger: TGGGGCTGAGCTCAAAGACTCTTTTGGGAAAGACAACATGAAGTAACCTTCAGGCCAAAGTATCTCTTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR CAA 72 bp | AGAGTAGGCTTTATTCAAGATGGCAGGATAGGAGAGTaGGGAATAGTTCCTTGTGAGGAGTCTTTAAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: RVGFIQDGRIGE*GIVPCEESLNN Trigger: ATTATTTAAAGACTCCTCACAAGGAACTATTCCCAACTCTCCTATCCTGCCATCTTGAATAAAGCCTACTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR CAA 72 bp | TTCCCAGAAGCTTATATATGCACATGTCTGTCTGAGTaGTTTGTATCTGAACTTTTGGCCACTAGTCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: FPEAYICTCLSE*FVSELLATSLF Trigger: GAATAGACTAGTGGCCAAAAGTTCAGATACAAACAACTCAGACAGACATGTGCATATATAAGCTTCTGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS-3UTR GCA 90 bp | GATGGCAGGATAGGAGAGTTGGGAATAGTTCCTTGTGAGGAGTCTTTAAATAATTTAGATTCAGAAGGCTaGTGTCATCTTGATTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DGRIGELGIVPCEESLNNLDSEG*CHLDFS Trigger: TGAAAAATCAAGATGACAGCAGCCTTCTGAATCTAA...ATTATTTAAAGACTCCTCACAAGGAACTATTCCCAACTCTCCTATCCTGCCATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| 3UTR CAA 72 bp | CAGAAGCTTATATATGCACATGTCTGTCTGAGTTGTTaGTATCTGAACTTTTGGCCACTAGTCTATTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QKLIYAHVCLSC*YLNFWPLVYSN Trigger: ATTTGAATAGACTAGTGGCCAAAAGTTCAGATACAAACAACTCAGACAGACATGTGCATATATAAGCTTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS CCA 90 bp | GTGTTGAACTCTTGGACAAGCATCTTGCAGTCGTCCAGGGCTCGTTaGGTTTTGTGGGCGCTTTCGGAGCCGCTGCCCCTGCGCTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VLNSWTSILQSSRAR*VLWALSEPLPLRSQ Trigger: TTGGGAGCGCAGGGGCAGCGGCTCCGAAAGCGCCCACAAAACCCAACGAGCCCTGGACGACTGCAAGATGCTTGTCCAAGAGTTCAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS-3UTR CAA 90 bp | GATGCTTCTGTTGAGGGCAAAGACCATTTCCTGCAAGGAGCAGAGGGAGGGAGCGATGGCAGCCAGCTTTaGGTGTGCCTGACGGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DASVEGKDHFLQGAEGGSDGSQL*VCLTGH Trigger: ATGGCCCGTCAGGCACACCAAAAGCTGGCTGCCATC...GCTCCCTCCCTCTGCTCCTTGCAGGAAATGGTCTTTGCCCTCAACAGAAGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS GCA 90 bp | TCTCTTTCAGTGTTTTCAATATCTGTGGCGACCTGCCAGCACTGCTaGTGGCTCTCGAGAGGGGATGACAAGGAGTCCTCCAGGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLSVFSISVATCQHC*WLSRGDDKESSRAG Trigger: ACCTGCCCTGGAGGACTCCTTGTCATCCCCTCTCGAGAGCCAGCAGCAGTGCTGGCAGGTCGCCACAGATATTGAAAACACTGAAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS CCA 90 bp | CTTTCAGTGTTTTCAATATCTGTGGCGACCTGCCAGCACTGCTGCTaGCTCTCGAGAGGGGATGACAAGGAGTCCTCCAGGGCAGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSVFSISVATCQHCC*LSRGDDKESSRAGV Trigger: AACACCTGCCCTGGAGGACTCCTTGTCATCCCCTCTCGAGAGCCAGCAGCAGTGCTGGCAGGTCGCCACAGATATTGAAAACACTGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS TCA 90 bp | GGTTCTTGTCTTGTGCATTTCAGCTCGCAGAGAGGGGCAGCTGACTaGGACGTCCCCAATAGAAATGACCAACTCTCGGTACAGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSCLVHFSSQRGAAD*DVPNRNDQLSVQGH Trigger: GTGGCCCTGTACCGAGAGTTGGTCATTTCTATTGGGGACGTCTCAGTCAGCTGCCCCTCTCTGCGAGCTGAAATGCACAAGACAAGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS GCA 90 bp | ATGTCTCTTTCAGTGTTTTCAATATCTGTGGCGACCTGCCAGCACTaGTGCTGGCTCTCGAGAGGGGATGACAAGGAGTCCTCCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MSLSVFSISVATCQH*CWLSRGDDKESSRA Trigger: TGCCCTGGAGGACTCCTTGTCATCCCCTCTCGAGAGCCAGCAGCAGTGCTGGCAGGTCGCCACAGATATTGAAAACACTGAAAGAGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS TCA 90 bp | TCACCATCTTCCGGGCCTGAGATGGCAGCCAGCTTTTGGTGTGCCTaGCGGGCCATTTCACAGCCTTTGGTTCTTGTCTTGTGCATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPSSGPEMAASFWCA*RAISQPLVLVLCIS Trigger: TGAAATGCACAAGACAAGAACCAAAGGCTGTGAAATGGCCCGTCAGGCACACCAAAAGCTGGCTGCCATCTCAGGCCCGGAAGATGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS GCA 90 bp | GAGACGTCCCCAATAGAAATGACCAACTCTCGGTACAGGGCCACTTaGGTGTTGAACTCTTGGACAAGCATCTTGCAGTCGTCCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ETSPIEMTNSRYRAT*VLNSWTSILQSSRA Trigger: AGCCCTGGACGACTGCAAGATGCTTGTCCAAGAGTTCAACACGCAAGTGGCCCTGTACCGAGAGTTGGTCATTTCTATTGGGGACGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS-3UTR CAA 90 bp | ATTTCTTGCATCTGTCACGGCATGGTTCAGAGCAGACATGCACAATGTCAACTTCGGCTGGGGCGCTTTTaGCGCCCATTCGGTGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ISCICHGMVQSRHAQCQLRLGRF*RPFGAE Trigger: TTCTGCACCGAATGGGCGCAAAAAGCGCCCCAGCCG...AAGTTGACATTGTGCATGTCTGCTCTGAACCATGCCGTGACAGATGCAAGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR CAA 90 bp | GATGCTTCTGTTGAGGGCAAAGACCATTTCCTGCAAGGAGCAGAGGGAGGGAGCCCTTTGGTTCTTGTCTaGTGCATTTCAGCTCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: DASVEGKDHFLQGAEGGSPLVLV*CISARR Trigger: TCTGCGAGCTGAAATGCACAAGACAAGAACCAAAGG...GCTCCCTCCCTCTGCTCCTTGCAGGAAATGGTCTTTGCCCTCAACAGAAGCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS CCA 90 bp | GAAACTGAAGAGACCCCAGCAGACAAATGGACTTCAGCATCTCTGTaGTGTACATCTCTAGGCAACACTGCAGCTGGATGTAAAGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ETEETPADKWTSASL*CTSLGNTAAGCKAG Trigger: GCCGGCTTTACATCCAGCTGCAGTGTTGCCTAGAGATGTACACCACAGAGATGCTGAAGTCCATTTGTCTGCTGGGGTCTCTTCAGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS-3UTR CAA 90 bp | CCAAAACCAATTAGGACCCTGCTGCTTCTCCAGCTTGCTTTGTACCCCTTTAATCTCTGCAGCGGAGGTTaGCTGATCTGGAAGATCGAG | + |
|
Preference number: 5 (lower is better) Translates to: PKPIRTLLLLQLALYPFNLCSGG*LIWKIE Trigger: CTCGATCTTCCAGATCAGCAAACCTCCGCTGCAGAG...ATTAAAGGGGTACAAAGCAAGCTGGAGAAGCAGCAGGGTCCTAATTGGTTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR CAA 90 bp | GATGGCAGGATAGGAGAGTTGGGAATAGTTCCTTGTGAGGAGTCTTTAAATAATAGGGCTCGTTGGGTTTaGTGGGCGCTTTCGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: DGRIGELGIVPCEESLNNRARWV*WALSEP Trigger: CGGCTCCGAAAGCGCCCACAAAACCCAACGAGCCCT...ATTATTTAAAGACTCCTCACAAGGAACTATTCCCAACTCTCCTATCCTGCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS TCA 90 bp | TTGAGACAAGACAACATAAGCCGAAGAACCTTCTCTTCCGTCTTCTaGCCATGGGGTAGGGCGTTAGATTCAGAAGGCTGCTGTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRQDNISRRTFSSVF*PWGRALDSEGCCHL Trigger: AAGATGACAGCAGCCTTCTGAATCTAACGCCCTACCCCATGGTCAGAAGACGGAAGAGAAGGTTCTTCGGCTTATGTTGTCTTGTCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS-3UTR CAA 90 bp | CTGAACTTTTGGCCACTAGTCTATTCAAATATGTTCAATGCTATCTGTGGATTAGTCGTCCAGGGCTCGTaGGGTTTTGTGGGCGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LNFWPLVYSNMFNAICGLVVQGS*GFVGAF Trigger: GAAAGCGCCCACAAAACCCAACGAGCCCTGGACGAC...TAATCCACAGATAGCATTGAACATATTTGAATAGACTAGTGGCCAAAAGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS-3UTR CAA 90 bp | ATTCAACCTAATACAACAATTGTCCATGCTCTCTCCATCTTCCATAAAGTGAAATCTTGGACAAGCATCTaGCAGTCGTCCAGGGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: IQPNTTIVHALSIFHKVKSWTSI*QSSRAR Trigger: ACGAGCCCTGGACGACTGCAAGATGCTTGTCCAAGA...TTTCACTTTATGGAAGATGGAGAGAGCATGGACAATTGTTGTATTAGGTTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS-3UTR CAA 90 bp | ATTCAACCTAATACAACAATTGTCCATGCTCTCTCCATCTTCCATAAAGTGAAATCGGTACAGGGCCACTaGCGTGTTGAACTCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: IQPNTTIVHALSIFHKVKSVQGH*RVELLD Trigger: GTCCAAGAGTTCAACACGCAAGTGGCCCTGTACCGA...TTTCACTTTATGGAAGATGGAGAGAGCATGGACAATTGTTGTATTAGGTTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS-3UTR CAA 90 bp | ATTTCTTGCATCTGTCACGGCATGGTTCAGAGCAGACATGCACAATGTCAACTTGCATTCTCCTCAATTTaGCTGTCCAAATTCTTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISCICHGMVQSRHAQCQLAFSSI*LSKFFA Trigger: AGCGAAGAATTTGGACAGCAAAATTGAGGAGAATGC...AAGTTGACATTGTGCATGTCTGCTCTGAACCATGCCGTGACAGATGCAAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS-3UTR CAA 90 bp | CTGAACTTTTGGCCACTAGTCTATTCAAATATGTTCAATGCTATCTGTGGATTATTGCGTGTTGAACTCTaGGACAAGCATCTTGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LNFWPLVYSNMFNAICGLLRVEL*DKHLAV Trigger: GACTGCAAGATGCTTGTCCAAGAGTTCAACACGCAA...TAATCCACAGATAGCATTGAACATATTTGAATAGACTAGTGGCCAAAAGTTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS-3UTR CAA 90 bp | ATTCAACCTAATACAACAATTGTCCATGCTCTCTCCATCTTCCATAAAGTGAAACACAGCCTTTGGTTCTaGTCTTGTGCATTTCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IQPNTTIVHALSIFHKVKHSLWF*SCAFQL Trigger: GAGCTGAAATGCACAAGACAAGAACCAAAGGCTGTG...TTTCACTTTATGGAAGATGGAGAGAGCATGGACAATTGTTGTATTAGGTTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS-3UTR CAA 90 bp | CTGAACTTTTGGCCACTAGTCTATTCAAATATGTTCAATGCTATCTGTGGATTAGCCATTTCACAGCCTTaGGTTCTTGTCTTGTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LNFWPLVYSNMFNAICGLAISQP*VLVLCI Trigger: AATGCACAAGACAAGAACCAAAGGCTGTGAAATGGC...TAATCCACAGATAGCATTGAACATATTTGAATAGACTAGTGGCCAAAAGTTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS GCA 72 bp | GGGCTCGTTGGGTTTTGTGGGCGCTTTCGGAGCCGCTaGCCCTGCGCTCCCAATCCCCGCTCTGCAGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GLVGFCGRFRSR*PCAPNPRSAAE Trigger: CTCCGCTGCAGAGCGGGGATTGGGAGCGCAGGGGCAGCGGCTCCGAAAGCGCCCACAAAACCCAACGAGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS CCA 72 bp | TCCCAATCCCCGCTCTGCAGCGGAGGTTTGCTGATCTaGAAGATCGAGGAGCGGGTGGACCGGCTGGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SQSPLCSGGLLI*KIEERVDRLGR Trigger: GCGCCCCAGCCGGTCCACCCGCTCCTCGATCTTCCAGATCAGCAAACCTCCGCTGCAGAGCGGGGATTGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS CAA 72 bp | CCCCTGCGCTCCCAATCCCCGCTCTGCAGCGGAGGTTaGCTGATCTGGAAGATCGAGGAGCGGGTGGACCGG | + |
|
Preference number: 6 (lower is better) Translates to: PLRSQSPLCSGG*LIWKIEERVDR Trigger: CCGGTCCACCCGCTCCTCGATCTTCCAGATCAGCAAACCTCCGCTGCAGAGCGGGGATTGGGAGCGCAGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS TCA 72 bp | TGCGCTCCCAATCCCCGCTCTGCAGCGGAGGTTTGCTaGTCTGGAAGATCGAGGAGCGGGTGGACCGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CAPNPRSAAEVC*SGRSRSGWTGW Trigger: CCAGCCGGTCCACCCGCTCCTCGATCTTCCAGATCAGCAAACCTCCGCTGCAGAGCGGGGATTGGGAGCGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS CCA 72 bp | AGCATCTTGCAGTCGTCCAGGGCTCGTTGGGTTTTGTaGGCGCTTTCGGAGCCGCTGCCCCTGCGCTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SILQSSRARWVL*ALSEPLPLRSQ Trigger: TTGGGAGCGCAGGGGCAGCGGCTCCGAAAGCGCCCACAAAACCCAACGAGCCCTGGACGACTGCAAGATGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS CAA 72 bp | ACAAGCATCTTGCAGTCGTCCAGGGCTCGTTGGGTTTaGTGGGCGCTTTCGGAGCCGCTGCCCCTGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSILQSSRARWV*WALSEPLPLRS Trigger: GGAGCGCAGGGGCAGCGGCTCCGAAAGCGCCCACAAAACCCAACGAGCCCTGGACGACTGCAAGATGCTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS CAA 90 bp | AACTCTTGGACAAGCATCTTGCAGTCGTCCAGGGCTCGTTGGGTTTaGTGGGCGCTTTCGGAGCCGCTGCCCCTGCGCTCCCAATCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: NSWTSILQSSRARWV*WALSEPLPLRSQSP Trigger: CGGGGATTGGGAGCGCAGGGGCAGCGGCTCCGAAAGCGCCCACAAAACCCAACGAGCCCTGGACGACTGCAAGATGCTTGTCCAAGAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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| CDS CAA 90 bp | CGTGTTGAACTCTTGGACAAGCATCTTGCAGTCGTCCAGGGCTCGTaGGGTTTTGTGGGCGCTTTCGGAGCCGCTGCCCCTGCGCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RVELLDKHLAVVQGS*GFVGAFGAAAPALP Trigger: TGGGAGCGCAGGGGCAGCGGCTCCGAAAGCGCCCACAAAACCCAACGAGCCCTGGACGACTGCAAGATGCTTGTCCAAGAGTTCAACACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS CCA 72 bp | TCTTGGACAAGCATCTTGCAGTCGTCCAGGGCTCGTTaGGTTTTGTGGGCGCTTTCGGAGCCGCTGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SWTSILQSSRAR*VLWALSEPLPL Trigger: CAGGGGCAGCGGCTCCGAAAGCGCCCACAAAACCCAACGAGCCCTGGACGACTGCAAGATGCTTGTCCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS CAA 72 bp | CTCTTGGACAAGCATCTTGCAGTCGTCCAGGGCTCGTaGGGTTTTGTGGGCGCTTTCGGAGCCGCTGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLDKHLAVVQGS*GFVGAFGAAAP Trigger: AGGGGCAGCGGCTCCGAAAGCGCCCACAAAACCCAACGAGCCCTGGACGACTGCAAGATGCTTGTCCAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS TCA 72 bp | TCCGGGCCTGAGATGGCAGCCAGCTTTTGGTGTGCCTaGCGGGCCATTTCACAGCCTTTGGTTCTTGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGPEMAASFWCA*RAISQPLVLVL Trigger: CAAGACAAGAACCAAAGGCTGTGAAATGGCCCGTCAGGCACACCAAAAGCTGGCTGCCATCTCAGGCCCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS CAA 72 bp | GGTGTGCCTGACGGGCCATTTCACAGCCTTTGGTTCTaGTCTTGTGCATTTCAGCTCGCAGAGAGGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GVPDGPFHSLWF*SCAFQLAERGS Trigger: GCTGCCCCTCTCTGCGAGCTGAAATGCACAAGACAAGAACCAAAGGCTGTGAAATGGCCCGTCAGGCACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS TCA 72 bp | CTTGTGCATTTCAGCTCGCAGAGAGGGGCAGCTGACTaGGACGTCCCCAATAGAAATGACCAACTCTCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LVHFSSQRGAAD*DVPNRNDQLSV Trigger: TACCGAGAGTTGGTCATTTCTATTGGGGACGTCTCAGTCAGCTGCCCCTCTCTGCGAGCTGAAATGCACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS GCA 72 bp | ATGTCTCTTTCAGTGTTTTCAATATCTGTGGCGACCTaGCAGCACTGCTGCTGGCTCTCGAGAGGGGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: MSLSVFSISVAT*QHCCWLSRGDD Trigger: GTCATCCCCTCTCGAGAGCCAGCAGCAGTGCTGGCAGGTCGCCACAGATATTGAAAACACTGAAAGAGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS TCA 72 bp | GACAACATAAGCCGAAGAACCTTCTCTTCCGTCTTCTaGCCATGGGGTAGGGCGTTAGATTCAGAAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DNISRRTFSSVF*PWGRALDSEGC Trigger: GCAGCCTTCTGAATCTAACGCCCTACCCCATGGTCAGAAGACGGAAGAGAAGGTTCTTCGGCTTATGTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS CCA 72 bp | GAGACCCCAGCAGACAAATGGACTTCAGCATCTCTGTaGTGTACATCTCTAGGCAACACTGCAGCTGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: ETPADKWTSASL*CTSLGNTAAGC Trigger: ACATCCAGCTGCAGTGTTGCCTAGAGATGTACACCACAGAGATGCTGAAGTCCATTTGTCTGCTGGGGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS CAA 90 bp | GACAAGGAGTCCTCCAGGGCAGGTGTTTCAGCATTCTCCTCAATTTaGCTGTCCAAATTCTTCGCTCCCCCACTAGCTTCTTTTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: DKESSRAGVSAFSSI*LSKFFAPPLASFPF Trigger: AAAAGGAAAAGAAGCTAGTGGGGGAGCGAAGAATTTGGACAGCAAAATTGAGGAGAATGCTGAAACACCTGCCCTGGAGGACTCCTTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
||
| CDS CCA 72 bp | CTTTTCGATGAAACTGAAGAGACCCCAGCAGACAAATaGACTTCAGCATCTCTGTGGTGTACATCTCTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LFDETEETPADK*TSASLWCTSLG Trigger: GCCTAGAGATGTACACCACAGAGATGCTGAAGTCCATTTGTCTGCTGGGGTCTCTTCAGTTTCATCGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063551.7 |
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