Pregenerated sensors for RGS4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038530Ensembl transcript IDs: ENSMUST00000027991.12, ENSMUST00000111357.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTAGGCACACTGGGAGACCAGGGAAGTGCAGTCTGCAGAACTCTTaGCTCCTTTCTGCTTCTCTGCCCCGCAGCTGGAAGGATTGGTCA | + |
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Preference number: 1 (lower is better) Translates to: IRHTGRPGKCSLQNS*LLSASLPRSWKDWS Trigger: TGACCAATCCTTCCAGCTGCGGGGCAGAGAAGCAGAAAGGAGCCAAGAGTTCTGCAGACTGCACTTCCCTGGTCTCCCAGTGTGCCTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111357.2 |
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| 3UTR TCA 90 bp | CAAACATTCAGCTCTAGACCAACCCAGCTGCTAATCAGCACACCCTaGGCACCCAGGCAAAGGAGGGAAGGCCATCAGCAGAGGGACTTA | + |
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Preference number: 1 (lower is better) Translates to: QTFSSRPTQLLISTP*APRQRREGHQQRDL Trigger: TAAGTCCCTCTGCTGATGGCCTTCCCTCCTTTGCCTGGGTGCTCAGGGTGTGCTGATTAGCAGCTGGGTTGGTCTAGAGCTGAATGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR CCA 90 bp | CACATGGCAGAAGCAGACATGCATATGGGAGGAGCATTCCTTACATaGACCAGCGGCAGGCAGGCTCACCATTCCAAGGAGCGATGGAAA | + |
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Preference number: 1 (lower is better) Translates to: HMAEADMHMGGAFLT*TSGRQAHHSKERWK Trigger: TTTCCATCGCTCCTTGGAATGGTGAGCCTGCCTGCCGCTGGTCCATGTAAGGAATGCTCCTCCCATATGCATGTCTGCTTCTGCCATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
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| 3UTR GCA 90 bp | GATGCAAGGCAGTTCAGTGTCAGTCAGACAGCAGAGTTTTCAGAGTaGTCACCCCTTAGCTTAGTGCTCAATGTGGAGGCCATCAACAAC | + |
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Preference number: 1 (lower is better) Translates to: DARQFSVSQTAEFSE*SPLSLVLNVEAINN Trigger: GTTGTTGATGGCCTCCACATTGAGCACTAAGCTAAGGGGTGAGCACTCTGAAAACTCTGCTGTCTGACTGACACTGAACTGCCTTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR TCA 90 bp | CTCTCCTTTCATTGGTCTCTGCTAGCCTTGGTGTTTGGGATGGGGTaGACAAGCTCTTACCTCAAAGCAGAAAACCAAAGAGGGCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: LSFHWSLLALVFGMG*TSSYLKAENQRGLC Trigger: GCAAAGCCCTCTTTGGTTTTCTGCTTTGAGGTAAGAGCTTGTTCACCCCATCCCAAACACCAAGGCTAGCAGAGACCAATGAAAGGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR TCA 90 bp | GAAGGCCATCAGCAGAGGGACTTAAAAAGTGCCAGTAGTGATCACTaGTGCAAGGCAGTTCAGTGTCAGTCAGACAGCAGAGTTTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: EGHQQRDLKSASSDH*CKAVQCQSDSRVFR Trigger: TCTGAAAACTCTGCTGTCTGACTGACACTGAACTGCCTTGCATCAGTGATCACTACTGGCACTTTTTAAGTCCCTCTGCTGATGGCCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR GCA 90 bp | CAATACGACGAGACTTGGATACACACTATTCCAGTGTCTTCATTTTaGAGCCCGGTACATTGGCTTACTAGCCACAATGGTGCTCACACA | + |
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Preference number: 1 (lower is better) Translates to: QYDETWIHTIPVSSF*SPVHWLTSHNGAHT Trigger: TGTGTGAGCACCATTGTGGCTAGTAAGCCAATGTACCGGGCTGCAAAATGAAGACACTGGAATAGTGTGTATCCAAGTCTCGTCGTATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR CCA 90 bp | TTCCTTTCCTCTCTCCTTTCATTGGTCTCTGCTAGCCTTGGTGTTTaGGATGGGGTGAACAAGCTCTTACCTCAAAGCAGAAAACCAAAG | + |
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Preference number: 1 (lower is better) Translates to: FLSSLLSLVSASLGV*DGVNKLLPQSRKPK Trigger: CTTTGGTTTTCTGCTTTGAGGTAAGAGCTTGTTCACCCCATCCCAAACACCAAGGCTAGCAGAGACCAATGAAAGGAGAGAGGAAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR GCA 90 bp | CAAGTTACTGTTCCTTTCTTAGCCTGCATGGCAGTTAATTCAGTTTaGCCTGTTCAGACACGGTATGAAGGACCAGAAATCAGAACATGC | + |
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Preference number: 1 (lower is better) Translates to: QVTVPFLACMAVNSV*PVQTRYEGPEIRTC Trigger: GCATGTTCTGATTTCTGGTCCTTCATACCGTGTCTGAACAGGGCAAACTGAATTAACTGCCATGCAGGCTAAGAAAGGAACAGTAACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR GCA 90 bp | AGCCACAATGGTGCTCACACATGTAATTTAAACTGGAGCAATGACTaGAGTGTTGCACGAATGTGTGTGTGCTCTCAAAGGCAGTACTTT | + |
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Preference number: 1 (lower is better) Translates to: SHNGAHTCNLNWSND*SVARMCVCSQRQYF Trigger: AAAGTACTGCCTTTGAGAGCACACACACATTCGTGCAACACTGCAGTCATTGCTCCAGTTTAAATTACATGTGTGAGCACCATTGTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR CCA 90 bp | CATTGGCTTACTAGCCACAATGGTGCTCACACATGTAATTTAAACTaGAGCAATGACTGCAGTGTTGCACGAATGTGTGTGTGCTCTCAA | + |
|
Preference number: 1 (lower is better) Translates to: HWLTSHNGAHTCNLN*SNDCSVARMCVCSQ Trigger: TTGAGAGCACACACACATTCGTGCAACACTGCAGTCATTGCTCCAGTTTAAATTACATGTGTGAGCACCATTGTGGCTAGTAAGCCAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAAGGCAGTTCAGTGTCAGTCAGACAGCAGAGTTTTCAGAGTGCTCACCCCTCTCTTGGCTCCTTTCTaGTTCTCTGCCCCGCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: CKAVQCQSDSRVFRVLTPLLAPF*FSAPQL Trigger: CAGCTGCGGGGCAGAGAAGCAGAAAGGAGCCAAGAG...AGGGGTGAGCACTCTGAAAACTCTGCTGTCTGACTGACACTGAACTGCCTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111357.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTTGAAAGGGGCAGACTGCCAGCCATCTTTGAAAATCCAGACCTACGGAGCCTCCCTGCCTCTGTGTaGGAATTAGGCACACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TVERGRLPAIFENPDLRSLPASV*ELGTLG Trigger: TCCCAGTGTGCCTAATTCTCACACAGAGGCAGGGAG...GCTCCGTAGGTCTGGATTTTCAAAGATGGCTGGCAGTCTGCCCCTTTCAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111357.2 |
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| 3UTR-3UTR CCA 90 bp | GCATATGGGAGGAGCATTCCTTACATGGACCAGCGGCAGGCAGGCTCACCATTCTCCGCCAAGACCCAGTaGTTCTATAGAACTCATTCC | + |
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Preference number: 2 (lower is better) Translates to: AYGRSIPYMDQRQAGSPFSAKTQ*FYRTHS Trigger: GGAATGAGTTCTATAGAACCACTGGGTCTTGGCGGA...GAATGGTGAGCCTGCCTGCCGCTGGTCCATGTAAGGAATGCTCCTCCCATATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
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| 3UTR-3UTR TCA 90 bp | AGGGCTAGGCAGCAAAGCCTGGACCACATTCCTTCATTCAGCTCAAACATTCAGAGTTTTACATGGAAGTaGCTCACACGCGGCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: RARQQSLDHIPSFSSNIQSFTWK*LTRGRQ Trigger: CTGCCTGCCGCGTGTGAGTCACTTCCATGTAAAACT...CTGAATGTTTGAGCTGAATGAAGGAATGTGGTCCAGGCTTTGCTGCCTAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAAGGCAGTTCAGTGTCAGTCAGACAGCAGAGTTTTCAGAGTGCTCACCCCTGTCCGTAGGAAGTGCTaGTGGCCAACATTACATGTG | + |
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Preference number: 2 (lower is better) Translates to: CKAVQCQSDSRVFRVLTPVRRKC*WPTLHV Trigger: CACATGTAATGTTGGCCAGCAGCACTTCCTACGGAC...AGGGGTGAGCACTCTGAAAACTCTGCTGTCTGACTGACACTGAACTGCCTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTAGGCAGCAAAGCCTGGACCACATTCCTTCATTCAGCTCAAACATTCAGCAGAGCATAGAGTCTTaGCATTTGGGCTCCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: RARQQSLDHIPSFSSNIQQSIES*HLGSLP Trigger: AGGCAGGGAGCCCAAATGCCAAGACTCTATGCTCTG...CTGAATGTTTGAGCTGAATGAAGGAATGTGGTCCAGGCTTTGCTGCCTAGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR CCA 90 bp | GCACATGGCAGAAGCAGACATGCATATGGGAGGAGCATTCCTTACATGGACCAGCCTCTCTCCTTTCATTaGTCTCTGCTAGCCTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: AHGRSRHAYGRSIPYMDQPLSFH*SLLALV Trigger: CACCAAGGCTAGCAGAGACCAATGAAAGGAGAGAGG...CTGGTCCATGTAAGGAATGCTCCTCCCATATGCATGTCTGCTTCTGCCATGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
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| 3UTR-3UTR TCA 90 bp | TGGCTATTCTCCGCCAAGACCCAGTGGTTCTATAGAACTCATTCCCCACAAGTTTTGAGGTCAAACTGTTaGAAGGGGCAGACTGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: WLFSAKTQWFYRTHSPQVLRSNC*KGQTAS Trigger: GCTGGCAGTCTGCCCCTTTCAACAGTTTGACCTCAA...AACTTGTGGGGAATGAGTTCTATAGAACCACTGGGTCTTGGCGGAGAATAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGTAGCCGTGGTTTTTAAAGTGAACAACCAACCACAGGGAACTAAGGAGGCTTCCTTTCTGCTTCTCTaGCCCGCAGCTGGAAGGATT | + |
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Preference number: 2 (lower is better) Translates to: QVAVVFKVNNQPQGTKEASFLLL*PAAGRI Trigger: AATCCTTCCAGCTGCGGGGCAGAGAAGCAGAAAGGA...AGCCTCCTTAGTTCCCTGTGGTTGGTTGTTCACTTTAAAAACCACGGCTACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111357.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGGATGGGGTGAACAAGCTCTTACCTCAAAGCAGAAAACCAAAGAGGGCTTTGGGAGACCAGGGAAGTaGAGTCTGCAGAACTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: LGWGEQALTSKQKTKEGFGRPGK*SLQNSW Trigger: CCAAGAGTTCTGCAGACTGCACTTCCCTGGTCTCCC...AAAGCCCTCTTTGGTTTTCTGCTTTGAGGTAAGAGCTTGTTCACCCCATCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111357.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAGTGCTCAATGTGGAGGCCATCAACAACTAAACACAAAGGCCCTGGCTATTACGCGGCAGGCAGCATaGACACTAGGCTACAATGTG | + |
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Preference number: 2 (lower is better) Translates to: LSAQCGGHQQLNTKALAITRQAA*TLGYNV Trigger: CACATTGTAGCCTAGTGTCCATGCTGCCTGCCGCGT...AATAGCCAGGGCCTTTGTGTTTAGTTGTTGATGGCCTCCACATTGAGCACTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGGCAGTTCAGTGTCAGTCAGACAGCAGAGTTTTCAGAGTGCTCACCCCTTCCGCCAAGACCCAGTaGTTCTATAGAACTCATTCC | + |
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Preference number: 2 (lower is better) Translates to: CKAVQCQSDSRVFRVLTPSAKTQ*FYRTHS Trigger: GGAATGAGTTCTATAGAACCACTGGGTCTTGGCGGA...AGGGGTGAGCACTCTGAAAACTCTGCTGTCTGACTGACACTGAACTGCCTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGGCCCTGGCTATTCTCCGCCAAGACCCAGTGGTTCTATAGAACTCATTCCCTGTTCAGACACGGTATaGAGGACCAGAAATCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: KGPGYSPPRPSGSIELIPCSDTV*RTRNQN Trigger: GTTCTGATTTCTGGTCCTTCATACCGTGTCTGAACA...GGGAATGAGTTCTATAGAACCACTGGGTCTTGGCGGAGAATAGCCAGGGCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR GCA 90 bp | GCACATGGCAGAAGCAGACATGCATATGGGAGGAGCATTCCTTACATGGACCAGTTGAAAGGGGCAGACTaGCAGCCATCTTTGAAAATC | + |
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Preference number: 2 (lower is better) Translates to: AHGRSRHAYGRSIPYMDQLKGAD*QPSLKI Trigger: GATTTTCAAAGATGGCTGGCAGTCTGCCCCTTTCAA...CTGGTCCATGTAAGGAATGCTCCTCCCATATGCATGTCTGCTTCTGCCATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
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| 3UTR-3UTR GCA 90 bp | GCAGAAGCAGACATGCATATGGGAGGAGCATTCCTTACATGGACCAGCGGCAGGGTTCCTTTCTTAGCCTaGATGGCAGTTAATTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: AEADMHMGGAFLTWTSGRVPFLA*MAVNSV Trigger: AACTGAATTAACTGCCATGCAGGCTAAGAAAGGAAC...CCTGCCGCTGGTCCATGTAAGGAATGCTCCTCCCATATGCATGTCTGCTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
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| 3UTR-3UTR GCA 90 bp | GCAGAAGCAGACATGCATATGGGAGGAGCATTCCTTACATGGACCAGCGGCAGGTTCAAGTATTTCACGTaGCTTGAAAAGCTCCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: AEADMHMGGAFLTWTSGRFKYFT*LEKLQA Trigger: TGCTTGGAGCTTTTCAAGGCACGTGAAATACTTGAA...CCTGCCGCTGGTCCATGTAAGGAATGCTCCTCCCATATGCATGTCTGCTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
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| 3UTR-3UTR GCA 90 bp | CCGCCAAGACCCAGTGGTTCTATAGAACTCATTCCCCACAAGTTACTGTTCCTTCAGGGAAGTGCAGTCTaGAGAACTCTTGGCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: PPRPSGSIELIPHKLLFLQGSAV*RTLGSF Trigger: AAAGGAGCCAAGAGTTCTGCAGACTGCACTTCCCTG...AAGGAACAGTAACTTGTGGGGAATGAGTTCTATAGAACCACTGGGTCTTGGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111357.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGCCTGCATGGCAGTTAATTCAGTTTGCCCTGTTCAGACACGGTATGAAGGACAGAGCATAGAGTCTTaGCATTTGGGCTCCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LACMAVNSVCPVQTRYEGQSIES*HLGSLP Trigger: AGGCAGGGAGCCCAAATGCCAAGACTCTATGCTCTG...TCCTTCATACCGTGTCTGAACAGGGCAAACTGAATTAACTGCCATGCAGGCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR CCA 90 bp | GCATATGGGAGGAGCATTCCTTACATGGACCAGCGGCAGGCAGGCTCACCATTCCTTAAGATCAATATTTaGCCTCAGGTTTTTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: AYGRSIPYMDQRQAGSPFLKINI*PQVFQS Trigger: GCTCTGAAAAACCTGAGGCCAAATATTGATCTTAAG...GAATGGTGAGCCTGCCTGCCGCTGGTCCATGTAAGGAATGCTCCTCCCATATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
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| 3UTR-3UTR TCA 90 bp | TGCAAGCATGTCTACACACTCCAGTTTGAGCACCTAGGATCTTTCCCATCTTTTTTGAGGTCAAACTGTTaGAAGGGGCAGACTGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: CKHVYTLQFEHLGSFPSFLRSNC*KGQTAS Trigger: GCTGGCAGTCTGCCCCTTTCAACAGTTTGACCTCAA...AAAAGATGGGAAAGATCCTAGGTGCTCAAACTGGAGTGTGTAGACATGCTTGCA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR TCA 90 bp | CTTAGTGCTCAATGTGGAGGCCATCAACAACTAAACACAAAGGCCCTGGCTATTCTACACACTCCAGTTTaGGCACCTAGGATCTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LSAQCGGHQQLNTKALAILHTPV*APRIFP Trigger: GGGAAAGATCCTAGGTGCTCAAACTGGAGTGTGTAG...AATAGCCAGGGCCTTTGTGTTTAGTTGTTGATGGCCTCCACATTGAGCACTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGTTGCACGAATGTGTGTGTGCTCTCAAAGGCAGTACTTTTAGAAGAATGACTGCCAGCCATCTTTaGAAATCCAGACCTACGGAG | + |
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Preference number: 2 (lower is better) Translates to: AVLHECVCALKGSTFRRMTASHL*KSRPTE Trigger: CTCCGTAGGTCTGGATTTTCAAAGATGGCTGGCAGT...CATTCTTCTAAAAGTACTGCCTTTGAGAGCACACACACATTCGTGCAACACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAAGCATGTCTACACACTCCAGTTTGAGCACCTAGGATCTTTCCCATCTTTTGATAGAATCGAGACTTaGGGAAGCGGCGGTAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: CKHVYTLQFEHLGSFPSFDRIET*GSGGRN Trigger: ATTCCTACCGCCGCTTCCTCAAGTCTCGATTCTATC...AAAAGATGGGAAAGATCCTAGGTGCTCAAACTGGAGTGTGTAGACATGCTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111357.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGCCCTGGCTATTCTCCGCCAAGACCCAGTGGTTCTATAGAACTCATTCCCAAATCAGAACATGCATaGAAGCATGTCTACACACTC | + |
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Preference number: 2 (lower is better) Translates to: KGPGYSPPRPSGSIELIPKSEHA*KHVYTL Trigger: GAGTGTGTAGACATGCTTGCATGCATGTTCTGATTT...GGGAATGAGTTCTATAGAACCACTGGGTCTTGGCGGAGAATAGCCAGGGCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR CAA 90 bp | ACGCGGCAGGCAGCATGGACACTAGGCTACAATGTGGATAAAGCATaGGTGCTTAAGATCAATATTTGGCCTCAGGTTTTTCAGAGCATA | + |
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Preference number: 2 (lower is better) Translates to: TRQAAWTLGYNVDKA*VLKINIWPQVFQSI Trigger: TATGCTCTGAAAAACCTGAGGCCAAATATTGATCTTAAGCACCAATGCTTTATCCACATTGTAGCCTAGTGTCCATGCTGCCTGCCGCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGCCTGCATGGCAGTTAATTCAGTTTGCCCTGTTCAGACACGGTATGAAGGATGTTCAGACACGGTATaGAGGACCAGAAATCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LACMAVNSVCPVQTRYEGCSDTV*RTRNQN Trigger: GTTCTGATTTCTGGTCCTTCATACCGTGTCTGAACA...TCCTTCATACCGTGTCTGAACAGGGCAAACTGAATTAACTGCCATGCAGGCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR TCA 90 bp | GAAACGAGTACCCTTAGAAAATTATTTCTTCAATACGACGAGACTTGGATACACCTAATCAGCACACCCTaGGCACCCAGGCAAAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: ETSTLRKLFLQYDETWIHLISTP*APRQRR Trigger: CCTCCTTTGCCTGGGTGCTCAGGGTGTGCTGATTAG...GTGTATCCAAGTCTCGTCGTATTGAAGAAATAATTTTCTAAGGGTACTCGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTTGAAAGGGGCAGACTGCCAGCCATCTTTGAAAATCCAGACCTACGGAGCCATTATTTGGAAACTTaGTCACCCTTAAGGAGACTT | + |
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Preference number: 2 (lower is better) Translates to: TVERGRLPAIFENPDLRSHYLET*SPLRRL Trigger: AAGTCTCCTTAAGGGTGAGCAAGTTTCCAAATAATG...GCTCCGTAGGTCTGGATTTTCAAAGATGGCTGGCAGTCTGCCCCTTTCAACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGTCAGTCAGACAGCAGAGTTTTCAGAGTGCTCACCCCTTAGCTTAGTGCTCGTTCCTTTCTTAGCCTaGATGGCAGTTAATTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: SVSQTAEFSECSPLSLVLVPFLA*MAVNSV Trigger: AACTGAATTAACTGCCATGCAGGCTAAGAAAGGAAC...GAGCACTAAGCTAAGGGGTGAGCACTCTGAAAACTCTGCTGTCTGACTGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTAGGCAGCAAAGCCTGGACCACATTCCTTCATTCAGCTCAAACATTCAGCCTTAAGATCAATATTTaGCCTCAGGTTTTTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: GLGSKAWTTFLHSAQTFSLKINI*PQVFQS Trigger: GCTCTGAAAAACCTGAGGCCAAATATTGATCTTAAG...GCTGAATGTTTGAGCTGAATGAAGGAATGTGGTCCAGGCTTTGCTGCCTAGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGTCTGTGAGTACAGGTACAATCTCAAAGTCATGATACTATTAGGGCAAGACGTGTTTGGGATGGGGTaGACAAGCTCTTACCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: AVCEYRYNLKVMILLGQDVFGMG*TSSYLK Trigger: TTTGAGGTAAGAGCTTGTTCACCCCATCCCAAACAC...GTCTTGCCCTAATAGTATCATGACTTTGAGATTGTACCTGTACTCACAGACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCTAGGCAGCAAAGCCTGGACCACATTCCTTCATTCAGCTCAAACATTCAGCTGGATAAAGCATTGGTaGTTAAGATCAATATTTGGC | + |
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Preference number: 2 (lower is better) Translates to: GLGSKAWTTFLHSAQTFSWIKHW*LRSIFG Trigger: GCCAAATATTGATCTTAAGCACCAATGCTTTATCCA...GCTGAATGTTTGAGCTGAATGAAGGAATGTGGTCCAGGCTTTGCTGCCTAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAGTCTGTGAGTACAGGTACAATCTCAAAGTCATGATACTATTAGGGCAAGTCCGTAGGAAGTGCTaGTGGCCAACATTACATGTG | + |
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Preference number: 2 (lower is better) Translates to: TAVCEYRYNLKVMILLGQVRRKC*WPTLHV Trigger: CACATGTAATGTTGGCCAGCAGCACTTCCTACGGAC...TTGCCCTAATAGTATCATGACTTTGAGATTGTACCTGTACTCACAGACTGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| 3UTR-3UTR GCA 90 bp | CTTACTAGCCACAATGGTGCTCACACATGTAATTTAAACTGGAGCAATGACTGCAGAGTCCGTAGGAAGTaGTGCTGGCCAACATTACAT | + |
|
Preference number: 2 (lower is better) Translates to: LTSHNGAHTCNLNWSNDCRVRRK*CWPTLH Trigger: ATGTAATGTTGGCCAGCAGCACTTCCTACGGACTCT...GCAGTCATTGCTCCAGTTTAAATTACATGTGTGAGCACCATTGTGGCTAGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTAGTGCTCAATGTGGAGGCCATCAACAACTAAACACAAAGGCCCTGGCTATTCCAGAAATCAGAACATaGATGCAAGCATGTCTACAC | + |
|
Preference number: 2 (lower is better) Translates to: LSAQCGGHQQLNTKALAIPEIRT*MQACLH Trigger: GTGTAGACATGCTTGCATGCATGTTCTGATTTCTGG...AATAGCCAGGGCCTTTGTGTTTAGTTGTTGATGGCCTCCACATTGAGCACTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAGCCTGCATGGCAGTTAATTCAGTTTGCCCTGTTCAGACACGGTATGAAGGAAAATCAGAACATGCATaGAAGCATGTCTACACACTC | + |
|
Preference number: 2 (lower is better) Translates to: LACMAVNSVCPVQTRYEGKSEHA*KHVYTL Trigger: GAGTGTGTAGACATGCTTGCATGCATGTTCTGATTT...TCCTTCATACCGTGTCTGAACAGGGCAAACTGAATTAACTGCCATGCAGGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR CCA 90 bp | CAATCTCAAAGTCATGATACTATTAGGGCAAGACCAAAGAGTTATACAGACATGCTGATGGGGGAGCTCTaGGGACATTACAAGCAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: QSQSHDTIRARPKSYTDMLMGEL*GHYKQD Trigger: GTCTTGCTTGTAATGTCCCCAGAGCTCCCCCATCAG...CATGTCTGTATAACTCTTTGGTCTTGCCCTAATAGTATCATGACTTTGAGATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR CCA 90 bp | AAACCAAAGAGGGCTTTGCAGTTCATGAGAACTTCCTTCCTCCTGATAAAACATCGCAGCTGGAAGGATTaGTCAGGTCAAGATAGAATC | + |
|
Preference number: 2 (lower is better) Translates to: KPKRALQFMRTSFLLIKHRSWKD*SGQDRI Trigger: GATTCTATCTTGACCTGACCAATCCTTCCAGCTGCG...ATGTTTTATCAGGAGGAAGGAAGTTCTCATGAACTGCAAAGCCCTCTTTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111357.2 |
||
| 3UTR CAA 90 bp | CAGCGGCAGGCAGGCTCACCATTCCAAGGAGCGATGGAAATACAATaGAAAACACACTCAGGATGTATTACACAAAATAATTTACTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: QRQAGSPFQGAMEIQ*KTHSGCITQNNLLL Trigger: GAGAAGTAAATTATTTTGTGTAATACATCCTGAGTGTGTTTTCAATTGTATTTCCATCGCTCCTTGGAATGGTGAGCCTGCCTGCCGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| 3UTR-3UTR TCA 90 bp | CATTTATTTACTGTCATCATTAAGATTTGTGTGTTTCGTCGGAAGCATCAGTGTAGTTTTACATGGAAGTaGCTCACACGCGGCAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: HLFTVIIKICVFRRKHQCSFTWK*LTRGRQ Trigger: CTGCCTGCCGCGTGTGAGTCACTTCCATGTAAAACT...ACACTGATGCTTCCGACGAAACACACAAATCTTAATGATGACAGTAAATAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| 3UTR-3UTR TCA 90 bp | CAATCTCAAAGTCATGATACTATTAGGGCAAGACCAAAGAGTTATACAGACATGCTACACACTCCAGTTTaGGCACCTAGGATCTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: QSQSHDTIRARPKSYTDMLHTPV*APRIFP Trigger: GGGAAAGATCCTAGGTGCTCAAACTGGAGTGTGTAG...CATGTCTGTATAACTCTTTGGTCTTGCCCTAATAGTATCATGACTTTGAGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAACGAGTACCCTTAGAAAATTATTTCTTCAATACGACGAGACTTGGATACACGCCAGTAGTGATCACTaGTGCAAGGCAGTTCAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: ETSTLRKLFLQYDETWIHASSDH*CKAVQC Trigger: ACACTGAACTGCCTTGCATCAGTGATCACTACTGGC...GTGTATCCAAGTCTCGTCGTATTGAAGAAATAATTTTCTAAGGGTACTCGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGTCTGTGAGTACAGGTACAATCTCAAAGTCATGATACTATTAGGGCAAGACCCTTTTCCATCAGGTTaGAAATCTTCTTCTGGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: AVCEYRYNLKVMILLGQDPFPSG*KSSSGL Trigger: AAGCCCAGAAGAAGATTTTCAACCTGATGGAAAAGG...GTCTTGCCCTAATAGTATCATGACTTTGAGATTGTACCTGTACTCACAGACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111357.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGGTACAATCTCAAAGTCATGATACTATTAGGGCAAGACCAAAGAGTTATACACCGTGGTTTTTAAAGTaGACAACCAACCACAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: QVQSQSHDTIRARPKSYTPWFLK*TTNHRE Trigger: TTCCCTGTGGTTGGTTGTTCACTTTAAAAACCACGG...TGTATAACTCTTTGGTCTTGCCCTAATAGTATCATGACTTTGAGATTGTACCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR GCA 90 bp | AAATTATTTCTTCAATACGACGAGACTTGGATACACACTATTCCAGTGTCTTCAAGAGTCCGTAGGAAGTaGTGCTGGCCAACATTACAT | + |
|
Preference number: 2 (lower is better) Translates to: KLFLQYDETWIHTIPVSSRVRRK*CWPTLH Trigger: ATGTAATGTTGGCCAGCAGCACTTCCTACGGACTCT...TGAAGACACTGGAATAGTGTGTATCCAAGTCTCGTCGTATTGAAGAAATAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR GCA 90 bp | AAATTATTTCTTCAATACGACGAGACTTGGATACACACTATTCCAGTGTCTTCACCAGTGTCTTCATTTTaGAGCCCGGTACATTGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: KLFLQYDETWIHTIPVSSPVSSF*SPVHWL Trigger: AAGCCAATGTACCGGGCTGCAAAATGAAGACACTGG...TGAAGACACTGGAATAGTGTGTATCCAAGTCTCGTCGTATTGAAGAAATAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR GCA 90 bp | CAATCTCAAAGTCATGATACTATTAGGGCAAGACCAAAGAGTTATACAGACATGCCAGAAATCAGAACATaGATGCAAGCATGTCTACAC | + |
|
Preference number: 2 (lower is better) Translates to: QSQSHDTIRARPKSYTDMPEIRT*MQACLH Trigger: GTGTAGACATGCTTGCATGCATGTTCTGATTTCTGG...CATGTCTGTATAACTCTTTGGTCTTGCCCTAATAGTATCATGACTTTGAGATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR TCA 90 bp | AAATTATTTCTTCAATACGACGAGACTTGGATACACACTATTCCAGTGTCTTCATTTAAACTGGAGCAATaGCTGCAGTGTTGCACGAAT | + |
|
Preference number: 2 (lower is better) Translates to: KLFLQYDETWIHTIPVSSFKLEQ*LQCCTN Trigger: ATTCGTGCAACACTGCAGTCATTGCTCCAGTTTAAA...TGAAGACACTGGAATAGTGTGTATCCAAGTCTCGTCGTATTGAAGAAATAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGGTACAATCTCAAAGTCATGATACTATTAGGGCAAGACCAAAGAGTTATACACATTATTTGGAAACTTaGTCACCCTTAAGGAGACTT | + |
|
Preference number: 2 (lower is better) Translates to: QVQSQSHDTIRARPKSYTHYLET*SPLRRL Trigger: AAGTCTCCTTAAGGGTGAGCAAGTTTCCAAATAATG...TGTATAACTCTTTGGTCTTGCCCTAATAGTATCATGACTTTGAGATTGTACCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR GCA 90 bp | CAATCTCAAAGTCATGATACTATTAGGGCAAGACCAAAGAGTTATACAGACATGTGGATAAAGCATTGGTaGTTAAGATCAATATTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: QSQSHDTIRARPKSYTDMWIKHW*LRSIFG Trigger: GCCAAATATTGATCTTAAGCACCAATGCTTTATCCA...CATGTCTGTATAACTCTTTGGTCTTGCCCTAATAGTATCATGACTTTGAGATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTTATTTACTGTCATCATTAAGATTTGTGTGTTTCGTCGGAAGCATCAGTGTACATGTAATTTAAACTaGAGCAATGACTGCAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: HLFTVIIKICVFRRKHQCTCNLN*SNDCSV Trigger: AACACTGCAGTCATTGCTCCAGTTTAAATTACATGT...ACACTGATGCTTCCGACGAAACACACAAATCTTAATGATGACAGTAAATAAATG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| 3UTR TCA 72 bp | AGCTCTAGACCAACCCAGCTGCTAATCAGCACACCCTaGGCACCCAGGCAAAGGAGGGAAGGCCATCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSRPTQLLISTP*APRQRREGHQQ Trigger: CTGCTGATGGCCTTCCCTCCTTTGCCTGGGTGCTCAGGGTGTGCTGATTAGCAGCTGGGTTGGTCTAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR GCA 72 bp | AGGGAAGTGCAGTCTGCAGAACTCTTGGCTCCTTTCTaGTTCTCTGCCCCGCAGCTGGAAGGATTGGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: REVQSAELLAPF*FSAPQLEGLVR Trigger: CCTGACCAATCCTTCCAGCTGCGGGGCAGAGAAGCAGAAAGGAGCCAAGAGTTCTGCAGACTGCACTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111357.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATATGGGAGGAGCATTCCTTACATGGACCAGCGGCAGGCAGGCTCACCATTCTCCTCTCTCCTTTCATaGGTCTCTGCTAGCCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: AYGRSIPYMDQRQAGSPFSSLLS*VSASLG Trigger: ACCAAGGCTAGCAGAGACCAATGAAAGGAGAGAGGA...GAATGGTGAGCCTGCCTGCCGCTGGTCCATGTAAGGAATGCTCCTCCCATATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTTGAAAGGGGCAGACTGCCAGCCATCTTTGAAAATCCAGACCTACGGAGCTCAGAGCATAGAGTCTaGGCATTTGGGCTCCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TVERGRLPAIFENPDLRSSEHRV*AFGLPA Trigger: GGCAGGGAGCCCAAATGCCAAGACTCTATGCTCTGA...GCTCCGTAGGTCTGGATTTTCAAAGATGGCTGGCAGTCTGCCCCTTTCAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR GCA 72 bp | CAGTTCAGTGTCAGTCAGACAGCAGAGTTTTCAGAGTaGTCACCCCTTAGCTTAGTGCTCAATGTGGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QFSVSQTAEFSE*SPLSLVLNVEA Trigger: GGCCTCCACATTGAGCACTAAGCTAAGGGGTGAGCACTCTGAAAACTCTGCTGTCTGACTGACACTGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR CAA 90 bp | CCGCCAAGACCCAGTGGTTCTATAGAACTCATTCCCCACAAGTTACTGTTCCTTATAGAGTCTTGGCATTaGGGCTCCCTGCCTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PPRPSGSIELIPHKLLFLIESWH*GSLPLC Trigger: ACACAGAGGCAGGGAGCCCAAATGCCAAGACTCTAT...AAGGAACAGTAACTTGTGGGGAATGAGTTCTATAGAACCACTGGGTCTTGGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTCAGTCAGACAGCAGAGTTTTCAGAGTGCTCACCCCTTAGCTTAGTGCTCGACTGCCAGCCATCTTaGAAAATCCAGACCTACGGA | + |
|
Preference number: 3 (lower is better) Translates to: SVSQTAEFSECSPLSLVLDCQPS*KIQTYG Trigger: TCCGTAGGTCTGGATTTTCAAAGATGGCTGGCAGTC...GAGCACTAAGCTAAGGGGTGAGCACTCTGAAAACTCTGCTGTCTGACTGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTGCTCAATGTGGAGGCCATCAACAACTAAACACAAAGGCCCTGGCTATTATAGAGTCTTGGCATTaGGGCTCCCTGCCTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSAQCGGHQQLNTKALAIIESWH*GSLPLC Trigger: ACACAGAGGCAGGGAGCCCAAATGCCAAGACTCTAT...AATAGCCAGGGCCTTTGTGTTTAGTTGTTGATGGCCTCCACATTGAGCACTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTGTTGCACGAATGTGTGTGTGCTCTCAAAGGCAGTACTTTTAGAAGAATGTCAGAGCATAGAGTCTaGGCATTTGGGCTCCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: AVLHECVCALKGSTFRRMSEHRV*AFGLPA Trigger: GGCAGGGAGCCCAAATGCCAAGACTCTATGCTCTGA...CATTCTTCTAAAAGTACTGCCTTTGAGAGCACACACACATTCGTGCAACACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCCCTGTTCAGACACGGTATGAAGGACCAGAAATCAGAACATGCATGCAAGCTTGAGGTCAAACTGTaGAAAGGGGCAGACTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FALFRHGMKDQKSEHACKLEVKL*KGADCQ Trigger: CTGGCAGTCTGCCCCTTTCAACAGTTTGACCTCAAG...CTTGCATGCATGTTCTGATTTCTGGTCCTTCATACCGTGTCTGAACAGGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR TCA 72 bp | TGGAAGGATTGGTCAGGTCAAGATAGAATCGAGACTTaGGGAAGCGGCGGTAGGAATCCTTTTCCATCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: WKDWSGQDRIET*GSGGRNPFPSG Trigger: ACCTGATGGAAAAGGATTCCTACCGCCGCTTCCTCAAGTCTCGATTCTATCTTGACCTGACCAATCCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111357.2 |
||
| 3UTR CCA 72 bp | TTTTACATGGAAGTGACTCACACGCGGCAGGCAGCATaGACACTAGGCTACAATGTGGATAAAGCATTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FYMEVTHTRQAA*TLGYNVDKALV Trigger: CACCAATGCTTTATCCACATTGTAGCCTAGTGTCCATGCTGCCTGCCGCGTGTGAGTCACTTCCATGTAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR CCA 72 bp | ACACAAAGGCCCTGGCTATTCTCCGCCAAGACCCAGTaGTTCTATAGAACTCATTCCCCACAAGTTACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: TQRPWLFSAKTQ*FYRTHSPQVTV Trigger: AACAGTAACTTGTGGGGAATGAGTTCTATAGAACCACTGGGTCTTGGCGGAGAATAGCCAGGGCCTTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR CCA 72 bp | TCTCTCCTTTCATTGGTCTCTGCTAGCCTTGGTGTTTaGGATGGGGTGAACAAGCTCTTACCTCAAAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLLSLVSASLGV*DGVNKLLPQSR Trigger: TCTGCTTTGAGGTAAGAGCTTGTTCACCCCATCCCAAACACCAAGGCTAGCAGAGACCAATGAAAGGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCAAGGCAGTTCAGTGTCAGTCAGACAGCAGAGTTTTCAGAGTGCTCACCCCTCCATTATTTGGAAACTaGCTCACCCTTAAGGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: CKAVQCQSDSRVFRVLTPPLFGN*LTLKET Trigger: AGTCTCCTTAAGGGTGAGCAAGTTTCCAAATAATGG...AGGGGTGAGCACTCTGAAAACTCTGCTGTCTGACTGACACTGAACTGCCTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCATCTTTGAAAATCCAGACCTACGGAGCCATTATTTGGAAACTTGCTCACTTGAGGTCAAACTGTaGAAAGGGGCAGACTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PAIFENPDLRSHYLETCSLEVKL*KGADCQ Trigger: CTGGCAGTCTGCCCCTTTCAACAGTTTGACCTCAAG...TGAGCAAGTTTCCAAATAATGGCTCCGTAGGTCTGGATTTTCAAAGATGGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR TCA 72 bp | CATTGGTCTCTGCTAGCCTTGGTGTTTGGGATGGGGTaGACAAGCTCTTACCTCAAAGCAGAAAACCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HWSLLALVFGMG*TSSYLKAENQR Trigger: TCTTTGGTTTTCTGCTTTGAGGTAAGAGCTTGTTCACCCCATCCCAAACACCAAGGCTAGCAGAGACCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR CCA 72 bp | AACAAAAAGGAGTTAGGAACACTGATGGGGGAGCTCTaGGGACATTACAAGCAAGACTGTCAAGAGAGACGA | + |
|
Preference number: 3 (lower is better) Translates to: NKKELGTLMGEL*GHYKQDCQERR Trigger: TCGTCTCTCTTGACAGTCTTGCTTGTAATGTCCCCAGAGCTCCCCCATCAGTGTTCCTAACTCCTTTTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR GCA 72 bp | GTTCCTTTCTTAGCCTGCATGGCAGTTAATTCAGTTTaGCCTGTTCAGACACGGTATGAAGGACCAGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: VPFLACMAVNSV*PVQTRYEGPEI Trigger: GATTTCTGGTCCTTCATACCGTGTCTGAACAGGGCAAACTGAATTAACTGCCATGCAGGCTAAGAAAGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR GCA 72 bp | GAGACTTGGATACACACTATTCCAGTGTCTTCATTTTaGAGCCCGGTACATTGGCTTACTAGCCACAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: ETWIHTIPVSSF*SPVHWLTSHNG Trigger: ACCATTGTGGCTAGTAAGCCAATGTACCGGGCTGCAAAATGAAGACACTGGAATAGTGTGTATCCAAGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR CCA 72 bp | ACTAGCCACAATGGTGCTCACACATGTAATTTAAACTaGAGCAATGACTGCAGTGTTGCACGAATGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TSHNGAHTCNLN*SNDCSVARMCV Trigger: CACACACATTCGTGCAACACTGCAGTCATTGCTCCAGTTTAAATTACATGTGTGAGCACCATTGTGGCTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR CAA 90 bp | CAATCTCAAAGTCATGATACTATTAGGGCAAGACCAAAGAGTTATACAGACATGGACTGCCAGCCATCTTaGAAAATCCAGACCTACGGA | + |
|
Preference number: 3 (lower is better) Translates to: QSQSHDTIRARPKSYTDMDCQPS*KIQTYG Trigger: TCCGTAGGTCTGGATTTTCAAAGATGGCTGGCAGTC...CATGTCTGTATAACTCTTTGGTCTTGCCCTAATAGTATCATGACTTTGAGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR CAA 90 bp | CAATCTCAAAGTCATGATACTATTAGGGCAAGACCAAAGAGTTATACAGACATGGCAATGACTGCAGTGTaGCACGAATGTGTGTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QSQSHDTIRARPKSYTDMAMTAV*HECVCA Trigger: AGCACACACACATTCGTGCAACACTGCAGTCATTGC...CATGTCTGTATAACTCTTTGGTCTTGCCCTAATAGTATCATGACTTTGAGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATTATTTCTTCAATACGACGAGACTTGGATACACACTATTCCAGTGTCTTCATCCAGTGTCTTCATTTaGCAGCCCGGTACATTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KLFLQYDETWIHTIPVSSSSVFI*QPGTLA Trigger: AGCCAATGTACCGGGCTGCAAAATGAAGACACTGGA...TGAAGACACTGGAATAGTGTGTATCCAAGTCTCGTCGTATTGAAGAAATAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR TCA 90 bp | GCATATGGGAGGAGCATTCCTTACATGGACCAGCGGCAGGCAGGCTCACCATTCGATAGAATCGAGACTTaGGGAAGCGGCGGTAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AYGRSIPYMDQRQAGSPFDRIET*GSGGRN Trigger: ATTCCTACCGCCGCTTCCTCAAGTCTCGATTCTATC...GAATGGTGAGCCTGCCTGCCGCTGGTCCATGTAAGGAATGCTCCTCCCATATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS-3UTR TCA 90 bp | GCACATGGCAGAAGCAGACATGCATATGGGAGGAGCATTCCTTACATGGACCAGGTGTTCGCAGGAATCTaGCTTCTGCAGCAGGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: AHGRSRHAYGRSIPYMDQVFAGI*LLQQEP Trigger: GGGTTCCTGCTGCAGAAGTCAGATTCCTGCGAACAC...CTGGTCCATGTAAGGAATGCTCCTCCCATATGCATGTCTGCTTCTGCCATGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS-3UTR TCA 90 bp | GTGATCACTGATGCAAGGCAGTTCAGTGTCAGTCAGACAGCAGAGTTTTCAGAGGTGTTCGCAGGAATCTaGCTTCTGCAGCAGGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: VITDARQFSVSQTAEFSEVFAGI*LLQQEP Trigger: GGGTTCCTGCTGCAGAAGTCAGATTCCTGCGAACAC...CTCTGAAAACTCTGCTGTCTGACTGACACTGAACTGCCTTGCATCAGTGATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR TCA 90 bp | TGCAAGGCAGTTCAGTGTCAGTCAGACAGCAGAGTTTTCAGAGTGCTCACCCCTGTCCTTCTTGCTGTGTaGAGAACTGTGTTCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CKAVQCQSDSRVFRVLTPVLLAV*RTVFAG Trigger: TCCTGCGAACACAGTTCTTCACACAGCAAGAAGGAC...AGGGGTGAGCACTCTGAAAACTCTGCTGTCTGACTGACACTGAACTGCCTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTAGCCGTGGTTTTTAAAGTGAACAACCAACCACAGGGAACTAAGGAGGCTCAGGAATCTGACTTCTaGAGCAGGAACCCCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QVAVVFKVNNQPQGTKEAQESDF*SRNPSR Trigger: TCGGCTGGGGTTCCTGCTGCAGAAGTCAGATTCCTG...AGCCTCCTTAGTTCCCTGTGGTTGGTTGTTCACTTTAAAAACCACGGCTACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGCCCTGGCTATTCTCCGCCAAGACCCAGTGGTTCTATAGAACTCATTCCCCAGGGAAGTGCAGTCTaGAGAACTCTTGGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KGPGYSPPRPSGSIELIPQGSAV*RTLGSF Trigger: AAAGGAGCCAAGAGTTCTGCAGACTGCACTTCCCTG...GGGAATGAGTTCTATAGAACCACTGGGTCTTGGCGGAGAATAGCCAGGGCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS-3UTR CCA 90 bp | CCGCCAAGACCCAGTGGTTCTATAGAACTCATTCCCCACAAGTTACTGTTCCTTGGCTTGTCTCCTCTCTaGTGCAAGAGTCCAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPRPSGSIELIPHKLLFLGLSPL*CKSPGS Trigger: TGAACCTGGACTCTTGCACCAGAGAGGAGACAAGCC...AAGGAACAGTAACTTGTGGGGAATGAGTTCTATAGAACCACTGGGTCTTGGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGCCCTGGCTATTCTCCGCCAAGACCCAGTGGTTCTATAGAACTCATTCCCGAAAGCTTTGAAAGCTaGCAGTCCACATTCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGPGYSPPRPSGSIELIPESFES*QSTFMV Trigger: CACCATGAATGTGGACTGGCAGCTTTCAAAGCTTTC...GGGAATGAGTTCTATAGAACCACTGGGTCTTGGCGGAGAATAGCCAGGGCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS-3UTR GCA 90 bp | CTTACTAGCCACAATGGTGCTCACACATGTAATTTAAACTGGAGCAATGACTGCCTCTTGGCTCCTTTCTaGTTCTCTGCCCCGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTSHNGAHTCNLNWSNDCLLAPF*FSAPQL Trigger: CAGCTGCGGGGCAGAGAAGCAGAAAGGAGCCAAGAG...GCAGTCATTGCTCCAGTTTAAATTACATGTGTGAGCACCATTGTGGCTAGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS-3UTR CCA 90 bp | AAAGGCCCTGGCTATTCTCCGCCAAGACCCAGTGGTTCTATAGAACTCATTCCCTTCTTGACTTCTTCTTaGCTTACCCTCTGGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGPGYSPPRPSGSIELIPFLTSS*LTLWQV Trigger: AACTTGCCAGAGGGTAAGCCAAGAAGAAGTCAAGAA...GGGAATGAGTTCTATAGAACCACTGGGTCTTGGCGGAGAATAGCCAGGGCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTATTCTCCGCCAAGACCCAGTGGTTCTATAGAACTCATTCCCCACAAGTTTGTACTCCTCACAGCTaGTCCAGAAGTCAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WLFSAKTQWFYRTHSPQVCTPHS*SRSQCS Trigger: AGAACATTGACTTCTGGATCAGCTGTGAGGAGTACA...AACTTGTGGGGAATGAGTTCTATAGAACCACTGGGTCTTGGCGGAGAATAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS-3UTR GCA 90 bp | AGGGCTAGGCAGCAAAGCCTGGACCACATTCCTTCATTCAGCTCAAACATTCAGACCTCTTTTGTTGCTTaGACTGAGATGAACTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RARQQSLDHIPSFSSNIQTSFVA*TEMNSL Trigger: CAACGAGTTCATCTCAGTGCAAGCAACAAAAGAGGT...CTGAATGTTTGAGCTGAATGAAGGAATGTGGTCCAGGCTTTGCTGCCTAGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS-3UTR CCA 90 bp | CAGGTAGCCGTGGTTTTTAAAGTGAACAACCAACCACAGGGAACTAAGGAGGCTCAAAACAGGTTATTGTaGGCTGTAACATGTTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QVAVVFKVNNQPQGTKEAQNRLL*AVTCSG Trigger: GCCGGAACATGTTACAGCCCACAATAACCTGTTTTG...AGCCTCCTTAGTTCCCTGTGGTTGGTTGTTCACTTTAAAAACCACGGCTACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR CCA 90 bp | CTTAGTGCTCAATGTGGAGGCCATCAACAACTAAACACAAAGGCCCTGGCTATTCGCAGCTGGAAGGATTaGTCAGGTCAAGATAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: LSAQCGGHQQLNTKALAIRSWKD*SGQDRI Trigger: GATTCTATCTTGACCTGACCAATCCTTCCAGCTGCG...AATAGCCAGGGCCTTTGTGTTTAGTTGTTGATGGCCTCCACATTGAGCACTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| 3UTR CAA 72 bp | GTCAAACTGTTGAAAGGGGCAGACTGCCAGCCATCTTaGAAAATCCAGACCTACGGAGCCATTATTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VKLLKGADCQPS*KIQTYGAIIWK Trigger: TTTCCAAATAATGGCTCCGTAGGTCTGGATTTTCAAAGATGGCTGGCAGTCTGCCCCTTTCAACAGTTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR TCA 90 bp | ATCTTTGAAAATCCAGACCTACGGAGCCATTATTTGGAAACTTGCTCACCCTTAGTCCTTCTTGCTGTGTaGAGAACTGTGTTCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IFENPDLRSHYLETCSPLVLLAV*RTVFAG Trigger: TCCTGCGAACACAGTTCTTCACACAGCAAGAAGGAC...TAAGGGTGAGCAAGTTTCCAAATAATGGCTCCGTAGGTCTGGATTTTCAAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR GCA 90 bp | CAATCTCAAAGTCATGATACTATTAGGGCAAGACCAAAGAGTTATACAGACATGCAGGAATCTGACTTCTaGAGCAGGAACCCCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QSQSHDTIRARPKSYTDMQESDF*SRNPSR Trigger: TCGGCTGGGGTTCCTGCTGCAGAAGTCAGATTCCTG...CATGTCTGTATAACTCTTTGGTCTTGCCCTAATAGTATCATGACTTTGAGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR CAA 72 bp | GCCATCTTTGAAAATCCAGACCTACGGAGCCATTATTaGGAAACTTGCTCACCCTTAAGGAGACTTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AIFENPDLRSHY*ETCSPLRRLGK Trigger: TTTCCCAAGTCTCCTTAAGGGTGAGCAAGTTTCCAAATAATGGCTCCGTAGGTCTGGATTTTCAAAGATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR TCA 90 bp | CAGTTAATTCAGTTTGCCCTGTTCAGACACGGTATGAAGGACCAGAAATCAGAAACTTCAGGAAAGCTTTaGAAGCTGCCAGTCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: QLIQFALFRHGMKDQKSETSGKL*KLPVHI Trigger: AATGTGGACTGGCAGCTTTCAAAGCTTTCCTGAAGT...TTCTGATTTCTGGTCCTTCATACCGTGTCTGAACAGGGCAAACTGAATTAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS-3UTR TCA 90 bp | GCAGTGTTGCACGAATGTGTGTGTGCTCTCAAAGGCAGTACTTTTAGAAGAATGGGTTCACATTCATGGTaGATCAGGTTTTCCAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: AVLHECVCALKGSTFRRMGSHSW*IRFSND Trigger: ATCGTTGGAAAACCTGATTCACCATGAATGTGAACC...CATTCTTCTAAAAGTACTGCCTTTGAGAGCACACACACATTCGTGCAACACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111357.2 |
||
| CDS-3UTR GCA 90 bp | GAAACGAGTACCCTTAGAAAATTATTTCTTCAATACGACGAGACTTGGATACACTCCTTTCTGCTTCTCTaGCCCGCAGCTGGAAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: ETSTLRKLFLQYDETWIHSFLLL*PAAGRI Trigger: AATCCTTCCAGCTGCGGGGCAGAGAAGCAGAAAGGA...GTGTATCCAAGTCTCGTCGTATTGAAGAAATAATTTTCTAAGGGTACTCGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS-3UTR GCA 90 bp | CATTTATTTACTGTCATCATTAAGATTTGTGTGTTTCGTCGGAAGCATCAGTGTGGGAGACCAGGGAAGTaGAGTCTGCAGAACTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLFTVIIKICVFRRKHQCGRPGK*SLQNSW Trigger: CCAAGAGTTCTGCAGACTGCACTTCCCTGGTCTCCC...ACACTGATGCTTCCGACGAAACACACAAATCTTAATGATGACAGTAAATAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGTCTGTGAGTACAGGTACAATCTCAAAGTCATGATACTATTAGGGCAATTGTCTCCTCTCTGGTaGAAGAGTCCAGGTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TAVCEYRYNLKVMILLGQLSPLW*KSPGSH Trigger: ATGTGAACCTGGACTCTTGCACCAGAGAGGAGACAA...TTGCCCTAATAGTATCATGACTTTGAGATTGTACCTGTACTCACAGACTGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111357.2 |
||
| CDS-3UTR CCA 90 bp | GAAACGAGTACCCTTAGAAAATTATTTCTTCAATACGACGAGACTTGGATACACGGCTTGTCTCCTCTCTaGTGCAAGAGTCCAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETSTLRKLFLQYDETWIHGLSPL*CKSPGS Trigger: TGAACCTGGACTCTTGCACCAGAGAGGAGACAAGCC...GTGTATCCAAGTCTCGTCGTATTGAAGAAATAATTTTCTAAGGGTACTCGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTACAATCTCAAAGTCATGATACTATTAGGGCAAGACCAAAGAGTTATACATTGTCTCCTCTCTGGTaGAAGAGTCCAGGTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: QVQSQSHDTIRARPKSYTLSPLW*KSPGSP Trigger: AGGTGAACCTGGACTCTTGCACCAGAGAGGAGACAA...TGTATAACTCTTTGGTCTTGCCCTAATAGTATCATGACTTTGAGATTGTACCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS-3UTR CCA 90 bp | CAGTTAATTCAGTTTGCCCTGTTCAGACACGGTATGAAGGACCAGAAATCAGAATTCTTGACTTCTTCTTaGCTTACCCTCTGGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QLIQFALFRHGMKDQKSEFLTSS*LTLWQV Trigger: AACTTGCCAGAGGGTAAGCCAAGAAGAAGTCAAGAA...TTCTGATTTCTGGTCCTTCATACCGTGTCTGAACAGGGCAAACTGAATTAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR CAA 72 bp | GCAGCATGGACACTAGGCTACAATGTGGATAAAGCATaGGTGCTTAAGATCAATATTTGGCCTCAGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAWTLGYNVDKA*VLKINIWPQVF Trigger: AAAAACCTGAGGCCAAATATTGATCTTAAGCACCAATGCTTTATCCACATTGTAGCCTAGTGTCCATGCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| 3UTR CAA 72 bp | AAGCTCTTACCTCAAAGCAGAAAACCAAAGAGGGCTTaGCAGTTCATGAGAACTTCCTTCCTCCTGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KLLPQSRKPKRA*QFMRTSFLLIK Trigger: TTTTATCAGGAGGAAGGAAGTTCTCATGAACTGCAAAGCCCTCTTTGGTTTTCTGCTTTGAGGTAAGAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTACAATCTCAAAGTCATGATACTATTAGGGCAAGACCAAAGAGTTATACACCTTTTCCATCAGGTTaGAAATCTTCTTCTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVQSQSHDTIRARPKSYTPFPSG*KSSSGL Trigger: AAGCCCAGAAGAAGATTTTCAACCTGATGGAAAAGG...TGTATAACTCTTTGGTCTTGCCCTAATAGTATCATGACTTTGAGATTGTACCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| 3UTR CAA 72 bp | GCAGGCTCACCATTCCAAGGAGCGATGGAAATACAATaGAAAACACACTCAGGATGTATTACACAAAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGSPFQGAMEIQ*KTHSGCITQNN Trigger: ATTATTTTGTGTAATACATCCTGAGTGTGTTTTCAATTGTATTTCCATCGCTCCTTGGAATGGTGAGCCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS-3UTR CAA 90 bp | GATGCAAGGCAGTTCAGTGTCAGTCAGACAGCAGAGTTTTCAGAGTGCTCACCCGTAACATGTTCCGGCTaGTCTCCTCTCTGGTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DARQFSVSQTAEFSECSPVTCSG*SPLWCK Trigger: CTTGCACCAGAGAGGAGACAAGCCGGAACATGTTAC...GGGTGAGCACTCTGAAAACTCTGCTGTCTGACTGACACTGAACTGCCTTGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS GCA 90 bp | TCCTTCTTGCTGTGTGAAGAACTGTGTTCGCAGGAATCTGACTTCTaGAGCAGGAACCCCAGCCGATGTTTCATGTCCTTTGCACTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFLLCEELCSQESDF*SRNPSRCFMSFALL Trigger: GAGGAGTGCAAAGGACATGAAACATCGGCTGGGGTTCCTGCTGCAGAAGTCAGATTCCTGCGAACACAGTTCTTCACACAGCAAGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR CAA 90 bp | GATGCAAGGCAGTTCAGTGTCAGTCAGACAGCAGAGTTTTCAGAGTGCTCACCCGACTTCAGGAAAGCTTaGAAAGCTGCCAGTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: DARQFSVSQTAEFSECSPDFRKA*KAASPH Trigger: ATGTGGACTGGCAGCTTTCAAAGCTTTCCTGAAGTC...GGGTGAGCACTCTGAAAACTCTGCTGTCTGACTGACACTGAACTGCCTTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS CCA 90 bp | AACAGGTTATTGTGGGCTGTAACATGTTCCGGCTTGTCTCCTCTCTaGTGCAAGAGTCCAGGTTCACCTCTTTTGTTGCTTGCACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NRLLWAVTCSGLSPL*CKSPGSPLLLLALR Trigger: TCTCAGTGCAAGCAACAAAAGAGGTGAACCTGGACTCTTGCACCAGAGAGGAGACAAGCCGGAACATGTTACAGCCCACAATAACCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS-3UTR CAA 90 bp | CAGGTAGCCGTGGTTTTTAAAGTGAACAACCAACCACAGGGAACTAAGGAGGCTGATGTTTCATGTCCTTaGCACTCCTCAGGCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QVAVVFKVNNQPQGTKEADVSCP*HSSGRK Trigger: CTTCCTGCCTGAGGAGTGCAAAGGACATGAAACATC...AGCCTCCTTAGTTCCCTGTGGTTGGTTGTTCACTTTAAAAACCACGGCTACCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS GCA 90 bp | CTTCTTCTTGGCTTACCCTCTGGCAAGTTACTACTTTGTCCTTCTTaGTGTGTGAAGAACTGTGTTCGCAGGAATCTGACTTCTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLGLPSGKLLLCPS*CVKNCVRRNLTSAA Trigger: TGCTGCAGAAGTCAGATTCCTGCGAACACAGTTCTTCACACAGCAAGAAGGACAAAGTAGTAACTTGCCAGAGGGTAAGCCAAGAAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR CAA 90 bp | TTAGCCTGCATGGCAGTTAATTCAGTTTGCCCTGTTCAGACACGGTATGAAGGAACTACTTTGTCCTTCTaGCTGTGTGAAGAACTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LACMAVNSVCPVQTRYEGTTLSF*LCEELC Trigger: ACACAGTTCTTCACACAGCAAGAAGGACAAAGTAGT...TCCTTCATACCGTGTCTGAACAGGGCAAACTGAATTAACTGCCATGCAGGCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR CAA 90 bp | GAAACGAGTACCCTTAGAAAATTATTTCTTCAATACGACGAGACTTGGATACACGTAACATGTTCCGGCTaGTCTCCTCTCTGGTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ETSTLRKLFLQYDETWIHVTCSG*SPLWCK Trigger: CTTGCACCAGAGAGGAGACAAGCCGGAACATGTTAC...GTGTATCCAAGTCTCGTCGTATTGAAGAAATAATTTTCTAAGGGTACTCGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR CAA 90 bp | AAATTATTTCTTCAATACGACGAGACTTGGATACACACTATTCCAGTGTCTTCAGATGTTTCATGTCCTTaGCACTCCTCAGGCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KLFLQYDETWIHTIPVSSDVSCP*HSSGRK Trigger: CTTCCTGCCTGAGGAGTGCAAAGGACATGAAACATC...TGAAGACACTGGAATAGTGTGTATCCAAGTCTCGTCGTATTGAAGAAATAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS-3UTR CAA 90 bp | GAAACGAGTACCCTTAGAAAATTATTTCTTCAATACGACGAGACTTGGATACACACTACTTTGTCCTTCTaGCTGTGTGAAGAACTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ETSTLRKLFLQYDETWIHTTLSF*LCEELC Trigger: ACACAGTTCTTCACACAGCAAGAAGGACAAAGTAGT...GTGTATCCAAGTCTCGTCGTATTGAAGAAATAATTTTCTAAGGGTACTCGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS GCA 72 bp | CTGTGTGAAGAACTGTGTTCGCAGGAATCTGACTTCTaGAGCAGGAACCCCAGCCGATGTTTCATGTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LCEELCSQESDF*SRNPSRCFMSF Trigger: AAAGGACATGAAACATCGGCTGGGGTTCCTGCTGCAGAAGTCAGATTCCTGCGAACACAGTTCTTCACACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS CAA 72 bp | CAAAACAGGTTATTGTGGGCTGTAACATGTTCCGGCTaGTCTCCTCTCTGGTGCAAGAGTCCAGGTTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: QNRLLWAVTCSG*SPLWCKSPGSP Trigger: AGGTGAACCTGGACTCTTGCACCAGAGAGGAGACAAGCCGGAACATGTTACAGCCCACAATAACCTGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS CAA 90 bp | GGGCTTCATCAAAACAGGTTATTGTGGGCTGTAACATGTTCCGGCTaGTCTCCTCTCTGGTGCAAGAGTCCAGGTTCACCTCTTTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GLHQNRLLWAVTCSG*SPLWCKSPGSPLLL Trigger: CAACAAAAGAGGTGAACCTGGACTCTTGCACCAGAGAGGAGACAAGCCGGAACATGTTACAGCCCACAATAACCTGTTTTGATGAAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
||
| CDS CAA 72 bp | CAAAACAGGTTATTGTGGGCTGTAACATGTTCCGGCTaGTCTCCTCTCTGGTGCAAGAGTCCAGGTTCACAT | + |
|
Preference number: 6 (lower is better) Translates to: QNRLLWAVTCSG*SPLWCKSPGSH Trigger: ATGTGAACCTGGACTCTTGCACCAGAGAGGAGACAAGCCGGAACATGTTACAGCCCACAATAACCTGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111357.2 |
||
| CDS CAA 90 bp | ACTTCTTCTTGGCTTACCCTCTGGCAAGTTACTACTTTGTCCTTCTaGCTGTGTGAAGAACTGTGTTCGCAGGAATCTGACTTCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSSWLTLWQVTTLSF*LCEELCSQESDFCS Trigger: GCTGCAGAAGTCAGATTCCTGCGAACACAGTTCTTCACACAGCAAGAAGGACAAAGTAGTAACTTGCCAGAGGGTAAGCCAAGAAGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS TCA 72 bp | CCTCTCTGGTGCAAGAGTCCAGGTTCACATTCATGGTaGATCAGGTTTTCCAACGATTCAGCCCATTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PLWCKSPGSHSW*IRFSNDSAHFL Trigger: CAAGAAATGGGCTGAATCGTTGGAAAACCTGATTCACCATGAATGTGAACCTGGACTCTTGCACCAGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111357.2 |
||
| CDS GCA 72 bp | GGCTTACCCTCTGGCAAGTTACTACTTTGTCCTTCTTaGTGTGTGAAGAACTGTGTTCGCAGGAATCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: GLPSGKLLLCPS*CVKNCVRRNLT Trigger: AGTCAGATTCCTGCGAACACAGTTCTTCACACAGCAAGAAGGACAAAGTAGTAACTTGCCAGAGGGTAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS CAA 72 bp | TGGCTTACCCTCTGGCAAGTTACTACTTTGTCCTTCTaGCTGTGTGAAGAACTGTGTTCGCAGGAATCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: WLTLWQVTTLSF*LCEELCSQESD Trigger: GTCAGATTCCTGCGAACACAGTTCTTCACACAGCAAGAAGGACAAAGTAGTAACTTGCCAGAGGGTAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
||
| CDS CCA 72 bp | AAATCTTCTTCTGGGCTTCATCAAAACAGGTTATTGTaGGCTGTAACATGTTCCGGCTTGTCTCCTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: KSSSGLHQNRLL*AVTCSGLSPLW Trigger: CCAGAGAGGAGACAAGCCGGAACATGTTACAGCCCACAATAACCTGTTTTGATGAAGCCCAGAAGAAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027991.12 |
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| CDS CAA 72 bp | ACTTCTTCTTGGCTTACCCTCTGGCAAGTTACTACTTaGTCCTTCTTGCTGTGTGAAGAACTGTGTTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: TSSWLTLWQVTT*SFLLCEELCSQ Trigger: CTGCGAACACAGTTCTTCACACAGCAAGAAGGACAAAGTAGTAACTTGCCAGAGGGTAAGCCAAGAAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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| CDS CAA 90 bp | CATTTCTTGACTTCTTCTTGGCTTACCCTCTGGCAAGTTACTACTTaGTCCTTCTTGCTGTGTGAAGAACTGTGTTCGCAGGAATCTGAC | + |
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Preference number: 6 (lower is better) Translates to: HFLTSSWLTLWQVTT*SFLLCEELCSQESD Trigger: GTCAGATTCCTGCGAACACAGTTCTTCACACAGCAAGAAGGACAAAGTAGTAACTTGCCAGAGGGTAAGCCAAGAAGAAGTCAAGAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027991.12 ENSMUST00000111357.2 |
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