Pregenerated sensors for RGS22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037627Ensembl transcript IDs: ENSMUST00000172737.2, ENSMUST00000172831.8, ENSMUST00000173018.8
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGCTTCTCAGGGCTTAAAGAAATCCTaGTACTTGTCAGCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: MYSKGTQTIQHPGHSASQGLKKS*YLSAGG Trigger: TCCTCCTGCTGACAAGTACCAGGATTTCTTTAAGCC...CTGAGAAGCTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR CCA 90 bp | TTCAACACCCTGGGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAAGGTGCTGGGAGGAGGTaGAGCAGGTGGTCTTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: FNTLGIQLLRLVNVGLKKGAGRR*SRWSSE Trigger: CTCAGAAGACCACCTGCTCCACCTCCTCCCAGCACC...TTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCCCAGGGTGTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR CCA 90 bp | TGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGCTTCTCAGGTGTCTTCGTCGGTGCTaGGAGGAGGTGGAGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: CILKELRLFNTLGIQLLRCLRRC*EEVEQV Trigger: CACCTGCTCCACCTCCTCCCAGCACCGACGAAGACA...CCTGAGAAGCTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR GCA 90 bp | CAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAGATGCACCAGTCTaGCCTGCTCTCAGGCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: QLLRLVNVGLKKSWYLSAGDAPV*PALRPN Trigger: ATTGGGCCTGAGAGCAGGGCAGACTGGTGCATCTCC...TGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR GCA 90 bp | AGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGCTTCTCGCGTCAAGCTGCTCGTaGAGAATCCTGCCCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: RCILKELRLFNTLGIQLLASSCS*RILPQP Trigger: TGGCTGGGGCAGGATTCTGCACGAGCAGCTTGACGC...GAGAAGCTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| 3UTR CAA 72 bp | AGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTaGTCAGCAGGAGGATCTGAGCGTGGGCTGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: RLVNVGLKKSWY*SAGGSERGLES Trigger: GCTTTCCAGCCCACGCTCAGATCCTCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
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| CDS-3UTR CCA 90 bp | CTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAGGAGAGGGTGGCCATCTGTaGGAAAGGGTCAACATCCTT | + |
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Preference number: 4 (lower is better) Translates to: LRLVNVGLKKSWYLSAGGEGGHL*ERVNIL Trigger: AAGGATGTTGACCCTTTCCCACAGATGGCCACCCTC...TCCTCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR CCA 90 bp | TTCAACACCCTGGGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAAGACCTCAGGGGTCTGTaGAATGCAGGACTTCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FNTLGIQLLRLVNVGLKKDLRGL*NAGLRS Trigger: AGACCGAAGTCCTGCATTCCACAGACCCCTGAGGTC...TTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCCCAGGGTGTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR CCA 90 bp | GGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGAGCTGTGGCAATAACTaGGGATGCAGTCTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GIQLLRLVNVGLKKSWYLSCGNN*GCSLVV Trigger: CACCACCAGACTGCATCCCCAGTTATTGCCACAGCT...CAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR GCA 90 bp | CTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAGGAAGCCTATTCAAGACGTaGTTCTGGATTTCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLVNVGLKKSWYLSAGGSLFKT*FWISTS Trigger: GCTGGTGGAAATCCAGAAGCACGTCTTGAATAGGCT...TCCTCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR CCA 90 bp | TGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGCTTCTCAGGGATGCAGTCTGGTGGTaGGGTATACAGCAGGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: CILKELRLFNTLGIQLLRDAVWW*GIQQGN Trigger: ATTACCCTGCTGTATACCCCACCACCAGACTGCATC...CCTGAGAAGCTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR CCA 90 bp | TATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGCCGAGAGGGACAGCTTaGCCATTGCATACCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YHRCILKELRLFNTLGIQPRGTA*PLHTQW Trigger: CCACTGGGTATGCAATGGCCAAGCTGTCCCTCTCGG...CTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR TCA 90 bp | AACACCCTGGGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCAGGCGAGTCTTTCATTaGTATAGACCCCTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: NTLGIQLLRLVNVGLKKSRRVFH*YRPLFF Trigger: GAAGAAGAGGGGTCTATATCAATGAAAGACTCGCCT...GGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCCCAGGGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR TCA 90 bp | ATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAACGAGAAGTGCAGGGTaGGGTTTCTTTCCTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IQLLRLVNVGLKKSWYLSTRSAG*GFFPSH Trigger: GTGGGAAGGAAAGAAACCTCACCCTGCACTTCTCGT...TGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR TCA 90 bp | AACACCCTGGGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCCATTTCAACAGGGGGTaGAACTATAGCCTTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTLGIQLLRLVNVGLKKSHFNRG*NYSLVA Trigger: AGCAACAAGGCTATAGTTTCACCCCCTGTTGAAATG...GGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCCCAGGGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR TCA 90 bp | CTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAGTAAGCCATCTTGTCTaGCATCACCATCTGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRLVNVGLKKSWYLSAGVSHLV*HHHLCP Trigger: TGGACACAGATGGTGATGTCAGACAAGATGGCTTAC...TCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR GCA 90 bp | GCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTGGCAATAACTGGGGATaGAGTCTGGTGGTGGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: AYHRCILKELRLFNTLGIGNNWG*SLVVGY Trigger: ATACCCCACCACCAGACTGCATCCCCAGTTATTGCC...AATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR GCA 90 bp | CAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCATGCTCTCAGGCCCAATaGTCTCACTCTCTGAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: QLLRLVNVGLKKSWYLSACSQAQ*SHSLNL Trigger: TAAGTTCAGAGAGTGAGAGCATTGGGCCTGAGAGCA...TGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR GCA 90 bp | TTCAACACCCTGGGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAAGGTAGCGTTCCCCACTaGTCACAAGGTAGCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FNTLGIQLLRLVNVGLKKGSVPH*SQGSIF Trigger: AAAAATGCTACCTTGTGAGCAGTGGGGAACGCTACC...TTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCCCAGGGTGTTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR CCA 90 bp | CTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGATTCAAGACGTGCTTCTaGATTTCCACCAGCACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLRLVNVGLKKSWYLSAGFKTCF*ISTSTD Trigger: ATCCGTGCTGGTGGAAATCCAGAAGCACGTCTTGAA...TCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR TCA 90 bp | TTCAACACCCTGGGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCTTTCTTCCCTTCCTaGTGGAGTCCAATGTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FNTLGIQLLRLVNVGLKKSFFPS*WSPMSK Trigger: TTTCGACATTGGACTCCATCAGGAAGGGAAGAAAGA...TTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCCCAGGGTGTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR TCA 90 bp | GGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGGGCTTCTATGTACTTTaGATAACACCAGGTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GIQLLRLVNVGLKKSWYLGFYVL*ITPGWL Trigger: CAGCCAACCTGGTGTTATTCAAAGTACATAGAAGCC...CAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
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| CDS-3UTR TCA 90 bp | CAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGCTTCTATGTACTTTaGATAACACCAGGTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QLLRLVNVGLKKSWYLSAGFYVL*ITPGWL Trigger: CAGCCAACCTGGTGTTATTCAAAGTACATAGAAGCC...TGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
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| CDS-3UTR GCA 90 bp | AACACCCTGGGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTACACAAAATCTTGGTaGCCAATACAGAAGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: NTLGIQLLRLVNVGLKKSYTKSW*PIQKQR Trigger: CCTCTGCTTCTGTATTGGGCACCAAGATTTTGTGTA...GGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCCCAGGGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR GCA 90 bp | TTCAACACCCTGGGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAACAAAAGTACACACTGTaGTTCCACAGCTTGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: FNTLGIQLLRLVNVGLKKQKYTL*FHSLFP Trigger: AGGGAACAAGCTGTGGAAGCACAGTGTGTACTTTTG...TTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCCCAGGGTGTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR GCA 90 bp | CTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAGGAGACGCTTTCCTTTTCTaGTTATGTTCCTGTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LRLVNVGLKKSWYLSAGGDAFLF*LCSCLL Trigger: GAGAAGACAGGAACATAAGCAGAAAAGGAAAGCGTC...TCCTCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
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| CDS-3UTR CCA 90 bp | CAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCATCACAACATCATAGATaGGATTCCGAGGTTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: QLLRLVNVGLKKSWYLSASQHHR*DSEVAG Trigger: ACCAGCAACCTCGGAATCCCATCTATGATGTTGTGA...TGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR CCA 90 bp | AGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAGGATCTACTCGAGAGAAACAATaGCAGCCACACATTTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RLVNVGLKKSWYLSAGGSTREKQ*QPHIFQ Trigger: CTGGAAAATGTGTGGCTGCCATTGTTTCTCTCGAGT...AGATCCTCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR TCA 90 bp | TTCAACACCCTGGGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATATCTCTGGATGCTGTaGAGAGACACATTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FNTLGIQLLRLVNVGLKKYLWML*RDTFFF Trigger: GAAGAAGAATGTGTCTCTTCACAGCATCCAGAGATA...TTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCCCAGGGTGTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR GCA 90 bp | ATTCTTCTAGCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCAATTGTCTTCGTCGGTaGTGGGAGGAGGTGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ILLAYHRCILKELRLFNTNCLRR*WEEVEQ Trigger: CTGCTCCACCTCCTCCCAGCACCGACGAAGACAATT...GGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGCTAGAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR GCA 90 bp | TATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGTCAACCGACGAGAAGTaGAGGGTGAGGTTTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: YHRCILKELRLFNTLGIQSTDEK*RVRFLS Trigger: GGAAAGAAACCTCACCCTGCACTTCTCGTCGGTTGA...CTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR GCA 90 bp | AGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAGGATCTGACGCTTTCCTTTTCTaGTTATGTTCCTGTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RLVNVGLKKSWYLSAGGSDAFLF*LCSCLL Trigger: GAGAAGACAGGAACATAAGCAGAAAAGGAAAGCGTC...AGATCCTCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
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| CDS-3UTR GCA 90 bp | GGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGAGAGCCTGTAGTACTTaGATACTGCTTAACTCCACT | + |
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Preference number: 4 (lower is better) Translates to: GIQLLRLVNVGLKKSWYLRACST*ILLNST Trigger: AGTGGAGTTAAGCAGTATGCAAGTACTACAGGCTCT...CAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
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| CDS-3UTR GCA 90 bp | AGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAGGATCTAGAGCCTGTAGTACTTaGATACTGCTTAACTCCACT | + |
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Preference number: 4 (lower is better) Translates to: RLVNVGLKKSWYLSAGGSRACST*ILLNST Trigger: AGTGGAGTTAAGCAGTATGCAAGTACTACAGGCTCT...AGATCCTCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
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| CDS-3UTR CCA 90 bp | ATTCTTCTAGCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCGGTCAACATCCTTCCTaGGCTTCTCTTGACGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: ILLAYHRCILKELRLFNTGQHPS*ASLDGG Trigger: GCCTCCGTCAAGAGAAGCCCAGGAAGGATGTTGACC...GGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGCTAGAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR CCA 90 bp | CTTCTAGCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGTTGATTTCTTCTCCCTaGACCTCAGGGGTCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLAYHRCILKELRLFNTLLISSP*TSGVCG Trigger: TCCACAGACCCCTGAGGTCCAGGGAGAAGAAATCAA...CAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGCTAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR TCA 90 bp | CAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCACTTCTCCCAAGTTGTTaGGTCCCTGCATTTATTTTT | + |
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Preference number: 4 (lower is better) Translates to: QLLRLVNVGLKKSWYLSALLPSC*VPAFIF Trigger: AAAAATAAATGCAGGGACTCAACAACTTGGGAGAAG...TGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR TCA 90 bp | AACACCCTGGGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCAAGCATGTAGCTTTCTaGAACATGCAGAATCTAGTT | + |
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Preference number: 4 (lower is better) Translates to: NTLGIQLLRLVNVGLKKSKHVAF*NMQNLV Trigger: AACTAGATTCTGCATGTTTCAGAAAGCTACATGCTT...GGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCCCAGGGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR TCA 90 bp | CTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGATGTGTCTTTATCTTCTaGCGTGATGCAAACTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LLRLVNVGLKKSWYLSAGCVFIF*RDANCS Trigger: TGAACAGTTTGCATCACGTCAGAAGATAAAGACACA...TCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR CCA 90 bp | CTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAACGGAGCAATGTAAGTaGCAAAAAGATATTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LLRLVNVGLKKSWYLSAGTEQCK*QKDIGL Trigger: AAGCCCAATATCTTTTTGCCACTTACATTGCTCCGT...TCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR TCA 90 bp | TATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGAGTTTGTACCCACTATaGAATTCATGCCTGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YHRCILKELRLFNTLGIQSLYPL*NSCLCC Trigger: GCAGCACAGGCATGAATTTCATAGTGGGTACAAACT...CTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR TCA 90 bp | GGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGATGGTTGAAATAAATTaGTTTCTTCTCCCTGGACCT | + |
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Preference number: 4 (lower is better) Translates to: GIQLLRLVNVGLKKSWYLMVEIN*FLLPGP Trigger: AGGTCCAGGGAGAAGAAATCAATTTATTTCAACCAT...CAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR TCA 90 bp | CTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAGAAATTGCCTTGCAATaGCTGGATTCAATAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLRLVNVGLKKSWYLSAGEIALQ*LDSIML Trigger: AAGCATTATTGAATCCAGTCATTGCAAGGCAATTTC...TCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
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| CDS-3UTR GCA 90 bp | ATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAATCGCTTTCCAGAAATaGCGGAAGTCTTTCCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: IQLLRLVNVGLKKSWYLSIAFQK*RKSFPF Trigger: AAAAGGGAAAGACTTCCGGCATTTCTGGAAAGCGAT...TGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR GCA 90 bp | ATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGCTTCTCAGATCCTTAGAAGAAACTaGATTCAGAGGCTCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: MYSKGTQTIQHPGHSASQILRRN*IQRLTS Trigger: AGAAGTGAGCCTCTGAATGCAGTTTCTTCTAAGGAT...CTGAGAAGCTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS-3UTR GCA 90 bp | ATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCATCAGTAAAAGTAAAGTaGTTGTACCCCTCAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: IQLLRLVNVGLKKSWYLSSVKVK*LYPSGT Trigger: TGTCCCTGAGGGGTACAAGCACTTTACTTTTACTGA...TGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAAAGAAGCTGGACTTCTaGGTCCGAAGAAATATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLRLVNVGLKKSWYLSAGKKLDF*VRRNIF Trigger: AAAAATATTTCTTCGGACCCAGAAGTCCAGCTTCTT...TCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAGGAAAACTCACAAAACTGTaGCCAAAACTTAAACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRLVNVGLKKSWYLSAGGKLTKL*PKLKQN Trigger: GTTCTGTTTAAGTTTTGGCCACAGTTTTGTGAGTTT...TCCTCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAGGATCTCTTTCCACTTCTTCTTaGATTTTCAGAAGAATTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RLVNVGLKKSWYLSAGGSLSTSS*IFRRIR Trigger: GCGAATTCTTCTGAAAATCCAAGAAGAAGTGGAAAG...AGATCCTCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS-3UTR CCA 90 bp | GGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGCTTTCCACTTCTTCTTaGATTTTCAGAAGAATTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GIQLLRLVNVGLKKSWYLLSTSS*IFRRIR Trigger: GCGAATTCTTCTGAAAATCCAAGAAGAAGTGGAAAG...CAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS-3UTR TCA 90 bp | ATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCATTTATAGTCCTGGGGTaGACTCCATCATCAAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: IQLLRLVNVGLKKSWYLSFIVLG*TPSSKI Trigger: GATTTTTGATGATGGAGTTCACCCCAGGACTATAAA...TGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR TCA 90 bp | ATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGCTTCTCAGTTTAAAACCTCAGCCTaGATGTTTTTCAAGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MYSKGTQTIQHPGHSASQFKTSA*MFFKWS Trigger: AGACCACTTGAAAAACATTCAGGCTGAGGTTTTAAA...CTGAGAAGCTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR TCA 90 bp | GCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTATAATCTGGTTCTGTTaGTGCAAAGAAGCTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: AYHRCILKELRLFNTLGIIIWFC*CKEAGL Trigger: AAGTCCAGCTTCTTTGCATCAACAGAACCAGATTAT...AATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTAGCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGCAAATTCCCTTCTGTTaGCAATGTCATAGGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLAYHRCILKELRLFNTLQIPFC*QCHRSC Trigger: ACAGGACCTATGACATTGGCAACAGAAGGGAATTTG...CAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGCTAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR GCA 90 bp | GGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGAAAAGATATTGGGCTTaGTTGCATACTTTGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GIQLLRLVNVGLKKSWYLKRYWA*LHTLKG Trigger: ACCTTTCAAAGTATGCAAGCAAGCCCAATATCTTTT...CAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAAAGGATAAACTCTTCTaGTGTGTCAAAAAGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLLRLVNVGLKKSWYLSAKDKLF*CVKKIF Trigger: GAAGATCTTTTTGACACAGCAGAAGAGTTTATCCTT...TGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CCA 90 bp | GCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTGTGGCAAAAAGATATTaGGCTTGCTTGCATACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AYHRCILKELRLFNTLGIVAKRY*ACLHTL Trigger: CAAAGTATGCAAGCAAGCCCAATATCTTTTTGCCAC...AATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CCA 90 bp | GGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGAAACTCACAAAACTGTaGCCAAAACTTAAACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GIQLLRLVNVGLKKSWYLKLTKL*PKLKQN Trigger: GTTCTGTTTAAGTTTTGGCCACAGTTTTGTGAGTTT...CAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTAGCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGTTCTCAAGATGTCTTTaGTGTCTTTCAGGGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LLAYHRCILKELRLFNTLFSRCL*CLSGSL Trigger: TAAGGACCCTGAAAGACATCAAAGACATCTTGAGAA...CAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGCTAGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR TCA 90 bp | GCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTAATAATCTCACAGGATaGAGATATCCACTTACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AYHRCILKELRLFNTLGINNLTG*RYPLTL Trigger: GAGAGTAAGTGGATATCTTCATCCTGTGAGATTATT...AATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR TCA 90 bp | TATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGCTCCAATCTATCTTTTaGGATTTCCTCTACCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: YHRCILKELRLFNTLGIQLQSIF*DFLYHF Trigger: GAAATGGTAGAGGAAATCTCAAAAGATAGATTGGAG...CTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTAGCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGAAATTGCCTTGCAATaGCTGGATTCAATAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLAYHRCILKELRLFNTLEIALQ*LDSIML Trigger: AAGCATTATTGAATCCAGTCATTGCAAGGCAATTTC...CAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGCTAGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR GCA 90 bp | GCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTTTCCAGAAGTTGTGGTaGATCATTAACTACTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AYHRCILKELRLFNTLGIFQKLW*IINYFK Trigger: TTTGAAGTAGTTAATGATGCACCACAACTTCTGGAA...AATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CCA 90 bp | TATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGTGTCCTCAGCCTTCTTaGAAATTGTTTCTTTATGCA | + |
|
Preference number: 4 (lower is better) Translates to: YHRCILKELRLFNTLGIQCPQPS*KLFLYA Trigger: TGCATAAAGAAACAATTTCCAAGAAGGCTGAGGACA...CTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTTCTAGCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCTACGTTAAATCTAATTaGCTCTGGAAAGGTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILLAYHRCILKELRLFNTYVKSN*LWKGRK Trigger: CTTCCTACCTTTCCAGAGGCAATTAGATTTAACGTA...GGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGCTAGAAGAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS GCA 90 bp | ACGTGCTTCTGGATTTCCACCAGCACGGATGCGTCAAGCTGCTCGTaGAGAATCCTGCCCCAGCCACCACTCAGGAGCATAATCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TCFWISTSTDASSCS*RILPQPPLRSIIWF Trigger: GAACCAGATTATGCTCCTGAGTGGTGGCTGGGGCAGGATTCTGCACGAGCAGCTTGACGCATCCGTGCTGGTGGAAATCCAGAAGCACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS GCA 90 bp | TTCCAGCCTATTCAAGACGTGCTTCTGGATTTCCACCAGCACGGATaGGTCAAGCTGCTCGTGCAGAATCCTGCCCCAGCCACCACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FQPIQDVLLDFHQHG*VKLLVQNPAPATTQ Trigger: CTGAGTGGTGGCTGGGGCAGGATTCTGCACGAGCAGCTTGACGCATCCGTGCTGGTGGAAATCCAGAAGCACGTCTTGAATAGGCTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS CCA 90 bp | CAGGGGTCTGTGGAATGCAGGACTTCGGTCTTAACGGCAGGAGGGTaGCCATCTGTGGGAAAGGGTCAACATCCTTCCTGGGCTTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGSVECRTSVLTAGG*PSVGKGQHPSWASL Trigger: AAGAGAAGCCCAGGAAGGATGTTGACCCTTTCCCACAGATGGCCACCCTCCTGCCGTTAAGACCGAAGTCCTGCATTCCACAGACCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS GCA 90 bp | TTCAAGACGTGCTTCTGGATTTCCACCAGCACGGATGCGTCAAGCTaGTCGTGCAGAATCCTGCCCCAGCCACCACTCAGGAGCATAATC | + |
|
Preference number: 5 (lower is better) Translates to: FKTCFWISTSTDASS*SCRILPQPPLRSII Trigger: GATTATGCTCCTGAGTGGTGGCTGGGGCAGGATTCTGCACGAGCAGCTTGACGCATCCGTGCTGGTGGAAATCCAGAAGCACGTCTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS GCA 90 bp | TTTCAAATTCCCTTCTGTTGCCAATGTCATAGGTCCTGTGGGAGATaGACCAGTCTGCCCTGCTCTCAGGCCCAATGCTCTCACTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FQIPFCCQCHRSCGR*TSLPCSQAQCSHSL Trigger: CAGAGAGTGAGAGCATTGGGCCTGAGAGCAGGGCAGACTGGTGCATCTCCCACAGGACCTATGACATTGGCAACAGAAGGGAATTTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS GCA 90 bp | GAGAGAAACAATGGCAGCCACACATTTTCCAGCCTATTCAAGACGTaGTTCTGGATTTCCACCAGCACGGATGCGTCAAGCTGCTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ERNNGSHTFSSLFKT*FWISTSTDASSCSC Trigger: GCACGAGCAGCTTGACGCATCCGTGCTGGTGGAAATCCAGAAGCACGTCTTGAATAGGCTGGAAAATGTGTGGCTGCCATTGTTTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS CCA 90 bp | AACAATGGCAGCCACACATTTTCCAGCCTATTCAAGACGTGCTTCTaGATTTCCACCAGCACGGATGCGTCAAGCTGCTCGTGCAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: NNGSHTFSSLFKTCF*ISTSTDASSCSCRI Trigger: GATTCTGCACGAGCAGCTTGACGCATCCGTGCTGGTGGAAATCCAGAAGCACGTCTTGAATAGGCTGGAAAATGTGTGGCTGCCATTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS GCA 90 bp | TGTTGCCAATGTCATAGGTCCTGTGGGAGATGCACCAGTCTGCCCTaGTCTCAGGCCCAATGCTCTCACTCTCTGAACTTAAACTTACAT | + |
|
Preference number: 5 (lower is better) Translates to: CCQCHRSCGRCTSLP*SQAQCSHSLNLNLH Trigger: ATGTAAGTTTAAGTTCAGAGAGTGAGAGCATTGGGCCTGAGAGCAGGGCAGACTGGTGCATCTCCCACAGGACCTATGACATTGGCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS CCA 90 bp | CGGAACACATACGGCCCCAGCTCCTTCCTGTGTTCAAGGATCTTCTaGGCTTGCTCAACTGGAATATCAATCTGTAAAGCTGGTGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: RNTYGPSSFLCSRIF*ACSTGISICKAGGI Trigger: TATCCCACCAGCTTTACAGATTGATATTCCAGTTGAGCAAGCCCAGAAGATCCTTGAACACAGGAAGGAGCTGGGGCCGTATGTGTTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS-3UTR CAA 90 bp | GGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGGGGACAGCTTGGCCATaGCATACCCAGTGGTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GIQLLRLVNVGLKKSWYLGTAWP*HTQWCP Trigger: AGGACACCACTGGGTATGCAATGGCCAAGCTGTCCC...CAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | AGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGCTTCTCCTTCCTGGGCTTCTCTaGACGGAGGCGCCAGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: RCILKELRLFNTLGIQLLLPGLL*TEAPEL Trigger: AAGTTCTGGCGCCTCCGTCAAGAGAAGCCCAGGAAG...GAGAAGCTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS TCA 90 bp | CTCCAGGTATACCCTCAGAAGAGCTTGAGAAGGCGAGTCTTTCATTaGTATAGACCCCTCTTCTTCTTCATCCAGCTCGGAAACTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQVYPQKSLRRRVFH*YRPLFFFIQLGNCF Trigger: AAAGCAGTTTCCGAGCTGGATGAAGAAGAAGAGGGGTCTATATCAATGAAAGACTCGCCTTCTCAAGCTCTTCTGAGGGTATACCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS CCA 90 bp | AAAATCTCAGAAGCTGTGGCAATAACTGGGGATGCAGTCTGGTGGTaGGGTATACAGCAGGGTAATGAAGCCATCGTTACTGTATTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KISEAVAITGDAVWW*GIQQGNEAIVTVFS Trigger: TGAGAATACAGTAACGATGGCTTCATTACCCTGCTGTATACCCCACCACCAGACTGCATCCCCAGTTATTGCCACAGCTTCTGAGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCACTGTGCTGCTCCATGTaGCTTGCGAGATCAACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QLLRLVNVGLKKSWYLSALCCSM*LARSTL Trigger: CAAAGTTGATCTCGCAAGCAACATGGAGCAGCACAG...TGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | TGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGCTTCTCAGGCTGTGCTTCCACAGCTaGTTCCCTGAATTCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: CILKELRLFNTLGIQLLRLCFHS*FPEFSQ Trigger: CTGTGAGAATTCAGGGAACAAGCTGTGGAAGCACAG...CCTGAGAAGCTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | AACACCCTGGGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCCAGCCAGTACTCTGTTaGTTTAGAGACATCCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NTLGIQLLRLVNVGLKKSQPVLC*FRDIRE Trigger: CTCTCGGATGTCTCTAAACAAACAGAGTACTGGCTG...GGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCCCAGGGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS TCA 90 bp | AATGTCTTTCTTCCCTTCCTGATGGAGTCCAATGTCGAAACTGGCTaGCGGAGCAATGTAAGTGGCAAAAAGATATTGGGCTTGCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: NVFLPFLMESNVETG*RSNVSGKKILGLLA Trigger: TGCAAGCAAGCCCAATATCTTTTTGCCACTTACATTGCTCCGTCAGCCAGTTTCGACATTGGACTCCATCAGGAAGGGAAGAAAGACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172737.2 ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | GCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTGAAACTATAGCCTTGTaGCTAGGCACAGGCGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: AYHRCILKELRLFNTLGIETIAL*LGTGGT Trigger: AGTCCCGCCTGTGCCTAGCAACAAGGCTATAGTTTC...AATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS GCA 90 bp | CATCTGTGTCCAGGGCTCCAGAAGGCTGAGAAGGATAAACTCTTCTaGTGTGTCAAAAAGATCTTCGAATGGTGGCTGTATTTTCATGTA | + |
|
Preference number: 5 (lower is better) Translates to: HLCPGLQKAEKDKLF*CVKKIFEWWLYFHV Trigger: TACATGAAAATACAGCCACCATTCGAAGATCTTTTTGACACAGCAGAAGAGTTTATCCTTCTCAGCCTTCTGGAGCCCTGGACACAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172737.2 ENSMUST00000172831.8 |
||
| CDS CCA 90 bp | TGTAAATGTCTTTCTTCCCTTCCTGATGGAGTCCAATGTCGAAACTaGCTGACGGAGCAATGTAAGTGGCAAAAAGATATTGGGCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CKCLSSLPDGVQCRN*LTEQCKWQKDIGLA Trigger: AGCAAGCCCAATATCTTTTTGCCACTTACATTGCTCCGTCAGCCAGTTTCGACATTGGACTCCATCAGGAAGGGAAGAAAGACATTTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172737.2 ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | ATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGCTTCTCAGTACCCTCAGAAGAGCTaGAGAAGGCGAGTCTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: MYSKGTQTIQHPGHSASQYPQKS*RRRVFH Trigger: ATGAAAGACTCGCCTTCTCAAGCTCTTCTGAGGGTA...CTGAGAAGCTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | AACACCCTGGGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCGTGTCCTCAGCCTTCTaGGAAATTGTTTCTTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: NTLGIQLLRLVNVGLKKSVSSAF*EIVSLC Trigger: GCATAAAGAAACAATTTCCAAGAAGGCTGAGGACAC...GGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCCCAGGGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | AGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGCTTCTCGATGGGATTCCGAGGTaGCTGGTTTTGCAGAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: RCILKELRLFNTLGIQLLDGIPR*LVLQNF Trigger: AAAATTCTGCAAAACCAGCAACCTCGGAATCCCATC...GAGAAGCTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAAAGGATCTTCTGGGCTaGCTCAACTGGAATATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLRLVNVGLKKSWYLSAGKDLLG*LNWNIN Trigger: ATTGATATTCCAGTTGAGCAAGCCCAGAAGATCCTT...TCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAAGGCTTCTATGTACTTaGAATAACACCAGGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QLLRLVNVGLKKSWYLSARLLCT*NNTRLA Trigger: AGCCAACCTGGTGTTATTCAAAGTACATAGAAGCCT...TGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAGGATCTCAGAAGAATTCGCTCTaGTTCCAAGGCTTCTATGTA | + |
|
Preference number: 5 (lower is better) Translates to: RLVNVGLKKSWYLSAGGSQKNSL*FQGFYV Trigger: TACATAGAAGCCTTGGAACAAGAGCGAATTCTTCTG...AGATCCTCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGACAGAAGAATTCGCTCTaGTTCCAAGGCTTCTATGTA | + |
|
Preference number: 5 (lower is better) Translates to: LLRLVNVGLKKSWYLSAGQKNSL*FQGFYV Trigger: TACATAGAAGCCTTGGAACAAGAGCGAATTCTTCTG...TCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS-3UTR CAA 90 bp | GGCATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTTTCTCAAGATGTCTTaGATGTCTTTCAGGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GIQLLRLVNVGLKKSWYLFLKMS*MSFRVL Trigger: AAGGACCCTGAAAGACATCAAAGACATCTTGAGAAA...CAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAATGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCACTCACTTCTCCCAAGTaGTTGAGTCCCTGCATTTAT | + |
|
Preference number: 5 (lower is better) Translates to: IQLLRLVNVGLKKSWYLSLTSPK*LSPCIY Trigger: ATAAATGCAGGGACTCAACAACTTGGGAGAAGTGAG...TGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAGGAATGGTTGTAATCTTCTaGTGGATGATAGATTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRLVNVGLKKSWYLSAGGMVVIF*WMIDSS Trigger: TGACGAATCTATCATCCACAAGAAGATTACAACCAT...TCCTCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAGGAGGATCTTTCCACTTCTTCTaGGATTTTCAGAAGAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: LRLVNVGLKKSWYLSAGGSFHFF*DFQKNS Trigger: CGAATTCTTCTGAAAATCCAAGAAGAAGTGGAAAGA...TCCTCCTGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS-3UTR CAA 90 bp | TATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGAAACCAGTCTTTTGTTaGAGTATAGGAAGCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YHRCILKELRLFNTLGIQKPVFC*SIGSLA Trigger: GGCCAGGCTTCCTATACTCAAACAAAAGACTGGTTT...CTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | ATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGCTTCTCAGACTTCTCCCAAGTTGTaGAGTCCCTGCATTTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: MYSKGTQTIQHPGHSASQTSPKL*SPCIYF Trigger: AAAATAAATGCAGGGACTCAACAACTTGGGAGAAGT...CTGAGAAGCTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | TGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCAGCTTCTCAGGGCATACTTTGAAAGGTaGAAGTGTTTCTTGGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CILKELRLFNTLGIQLLRAYFER*KCFLVE Trigger: TTCTACCAAGAAACACTTCAACCTTTCAAAGTATGC...CCTGAGAAGCTGAATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAGCAAAAAAGATATTGGGCTaGCTTGCATACTTTGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLLRLVNVGLKKSWYLSAKKILG*LAYFER Trigger: CCTTTCAAAGTATGCAAGCAAGCCCAATATCTTTTT...TGCTGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | GCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTCATAATCTGGTTCTGTaGATGCAAAGAAGCTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: AYHRCILKELRLFNTLGIHNLVL*MQRSWT Trigger: AGTCCAGCTTCTTTGCATCAACAGAACCAGATTATG...AATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCAAAGGATCTTCTGGGCTaGCTCAACTGGAATATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: IQLLRLVNVGLKKSWYLSKDLLG*LNWNIN Trigger: ATTGATATTCCAGTTGAGCAAGCCCAGAAGATCCTT...TGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS-3UTR CAA 90 bp | GCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTAGGCTTCTATGTACTTaGAATAACACCAGGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AYHRCILKELRLFNTLGIRLLCT*NNTRLA Trigger: AGCCAACCTGGTGTTATTCAAAGTACATAGAAGCCT...AATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS TCA 90 bp | TCTTCGGAACTGTTCGATATCTATCCAACACATAAGGTCAAGGCTTaGAGAATGAGACTCAAGAAACTGACGGAAATGTTCAAATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSELFDIYPTHKVKA*RMRLKKLTEMFKFQ Trigger: CTGGAATTTGAACATTTCCGTCAGTTTCTTGAGTCTCATTCTTCAAGCCTTGACCTTATGTGTTGGATAGATATCGAACAGTTCCGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAGCTTCTCAGGCTAGTTAACGTTGGCTTAAAGAAATCCTGGTACTTGTCATTGCTTTTCCAGAAGTaGTGGTGCATCATTAACTAC | + |
|
Preference number: 5 (lower is better) Translates to: IQLLRLVNVGLKKSWYLSLLFQK*WCIINY Trigger: GTAGTTAATGATGCACCACAACTTCTGGAAAAGCAA...TGACAAGTACCAGGATTTCTTTAAGCCAACGTTAACTAGCCTGAGAAGCTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS TCA 90 bp | GAGTGTAAACCAGTCTTTTGTTTGAGTATAGGAAGCCTGGCCAAGTaGAACGTAGAACTTCTTCATAATCATATAATTGTCTTCGTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: ECKPVFCLSIGSLAK*NVELLHNHIIVFVG Trigger: ACCGACGAAGACAATTATATGATTATGAAGAAGTTCTACGTTTCACTTGGCCAGGCTTCCTATACTCAAACAAAAGACTGGTTTACACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS TCA 90 bp | AGAACTCCATTTTCCAATAAATCTCCTTTCAGGGCCACAAACCGTTaGAATTGCCTTGCAATGACTGGATTCAATAATGCTTTACGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RTPFSNKSPFRATNR*NCLAMTGFNNALRK Trigger: TTTCCGTAAAGCATTATTGAATCCAGTCATTGCAAGGCAATTTCAACGGTTTGTGGCCCTGAAAGGAGATTTATTGGAAAATGGAGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS GCA 90 bp | TGTTCAAATTCCAGTTTGTTGTTAAGTAGGTCAGTAAAAGTAAAGTaGTTGTACCCCTCAGGGACATTCAGCCAGTACTCTGTTTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: CSNSSLLLSRSVKVK*LYPSGTFSQYSVCL Trigger: TAAACAAACAGAGTACTGGCTGAATGTCCCTGAGGGGTACAAGCACTTTACTTTTACTGACCTACTTAACAACAAACTGGAATTTGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172737.2 ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | GCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGCATTATGGTTGTAATCTTCTaGTGGATGATAGATTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AYHRCILKELRLFNTLGIMVVIF*WMIDSS Trigger: TGACGAATCTATCATCCACAAGAAGATTACAACCAT...AATGCCCAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTAGCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCCTGGGAAGTCTTTCCCTTTaGATCCAATTAATACCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLAYHRCILKELRLFNTLGSLSL*IQLIPC Trigger: ACAAGGTATTAATTGGATCAAAAGGGAAAGACTTCC...CAGGGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGCTAGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTTCTAGCCTATCATAGATGTATTCTAAAGGAACTCAGACTATTCAACACCTCTTTCCACTTCTTCTaGGATTTTCAGAAGAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: ILLAYHRCILKELRLFNTSFHFF*DFQKNS Trigger: CGAATTCTTCTGAAAATCCAAGAAGAAGTGGAAAGA...GGTGTTGAATAGTCTGAGTTCCTTTAGAATACATCTATGATAGGCTAGAAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS GCA 72 bp | TGCTTCTGGATTTCCACCAGCACGGATGCGTCAAGCTaGTCGTGCAGAATCCTGCCCCAGCCACCACTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CFWISTSTDASS*SCRILPQPPLR Trigger: CCTGAGTGGTGGCTGGGGCAGGATTCTGCACGAGCAGCTTGACGCATCCGTGCTGGTGGAAATCCAGAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS GCA 72 bp | TGGATTTCCACCAGCACGGATGCGTCAAGCTGCTCGTaGAGAATCCTGCCCCAGCCACCACTCAGGAGCATA | + |
|
Preference number: 6 (lower is better) Translates to: WISTSTDASSCS*RILPQPPLRSI Trigger: TATGCTCCTGAGTGGTGGCTGGGGCAGGATTCTGCACGAGCAGCTTGACGCATCCGTGCTGGTGGAAATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS CCA 72 bp | GGGTGGCCATCTGTGGGAAAGGGTCAACATCCTTCCTaGGCTTCTCTTGACGGAGGCGCCAGAACTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GWPSVGKGQHPS*ASLDGGARTSA Trigger: AGCTGAAGTTCTGGCGCCTCCGTCAAGAGAAGCCCAGGAAGGATGTTGACCCTTTCCCACAGATGGCCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS GCA 72 bp | CCCTTCTGTTGCCAATGTCATAGGTCCTGTGGGAGATaGACCAGTCTGCCCTGCTCTCAGGCCCAATGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PFCCQCHRSCGR*TSLPCSQAQCS Trigger: AGAGCATTGGGCCTGAGAGCAGGGCAGACTGGTGCATCTCCCACAGGACCTATGACATTGGCAACAGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS GCA 72 bp | ATTCAAGACGTGCTTCTGGATTTCCACCAGCACGGATaGGTCAAGCTGCTCGTGCAGAATCCTGCCCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: IQDVLLDFHQHG*VKLLVQNPAPA Trigger: GGCTGGGGCAGGATTCTGCACGAGCAGCTTGACGCATCCGTGCTGGTGGAAATCCAGAAGCACGTCTTGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS CAA 72 bp | CTGTGGGAAAGGGTCAACATCCTTCCTGGGCTTCTCTaGACGGAGGCGCCAGAACTTCAGCTCAGTGCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LWERVNILPGLL*TEAPELQLSAS Trigger: GCTAGCACTGAGCTGAAGTTCTGGCGCCTCCGTCAAGAGAAGCCCAGGAAGGATGTTGACCCTTTCCCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS TCA 72 bp | TGTGGGAAAGGGTCAACATCCTTCCTGGGCTTCTCTTaGCGGAGGCGCCAGAACTTCAGCTCAGTGCTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CGKGSTSFLGFS*RRRQNFSSVLA Trigger: TGCTAGCACTGAGCTGAAGTTCTGGCGCCTCCGTCAAGAGAAGCCCAGGAAGGATGTTGACCCTTTCCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS CCA 72 bp | AGCCACACATTTTCCAGCCTATTCAAGACGTGCTTCTaGATTTCCACCAGCACGGATGCGTCAAGCTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SHTFSSLFKTCF*ISTSTDASSCS Trigger: CGAGCAGCTTGACGCATCCGTGCTGGTGGAAATCCAGAAGCACGTCTTGAATAGGCTGGAAAATGTGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS TCA 72 bp | CCCCAGCCACCACTCAGGAGCATAATCTGGTTCTGTTaGTGCAAAGAAGCTGGACTTCTGGGTCCGAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PQPPLRSIIWFC*CKEAGLLGPKK Trigger: TTTCTTCGGACCCAGAAGTCCAGCTTCTTTGCATCAACAGAACCAGATTATGCTCCTGAGTGGTGGCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS GCA 72 bp | AATGGCAGCCACACATTTTCCAGCCTATTCAAGACGTaGTTCTGGATTTCCACCAGCACGGATGCGTCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: NGSHTFSSLFKT*FWISTSTDASS Trigger: GCTTGACGCATCCGTGCTGGTGGAAATCCAGAAGCACGTCTTGAATAGGCTGGAAAATGTGTGGCTGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS CCA 72 bp | GAAGCTGTGGCAATAACTGGGGATGCAGTCTGGTGGTaGGGTATACAGCAGGGTAATGAAGCCATCGTTACT | + |
|
Preference number: 6 (lower is better) Translates to: EAVAITGDAVWW*GIQQGNEAIVT Trigger: AGTAACGATGGCTTCATTACCCTGCTGTATACCCCACCACCAGACTGCATCCCCAGTTATTGCCACAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS CCA 72 bp | TCAGAAGCTGTGGCAATAACTGGGGATGCAGTCTGGTaGTGGGGTATACAGCAGGGTAATGAAGCCATCGTT | + |
|
Preference number: 6 (lower is better) Translates to: SEAVAITGDAVW*WGIQQGNEAIV Trigger: AACGATGGCTTCATTACCCTGCTGTATACCCCACCACCAGACTGCATCCCCAGTTATTGCCACAGCTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS CCA 72 bp | ATCTCAGAAGCTGTGGCAATAACTGGGGATGCAGTCTaGTGGTGGGGTATACAGCAGGGTAATGAAGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: ISEAVAITGDAV*WWGIQQGNEAI Trigger: GATGGCTTCATTACCCTGCTGTATACCCCACCACCAGACTGCATCCCCAGTTATTGCCACAGCTTCTGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS CAA 72 bp | GTTCCAAGGCTTCTATGTACTTTGAATAACACCAGGTaGGCTGCCGGCCATAGGACTGCAGGACTAGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VPRLLCTLNNTR*AAGHRTAGLVG Trigger: CCCTACTAGTCCTGCAGTCCTATGGCCGGCAGCCAACCTGGTGTTATTCAAAGTACATAGAAGCCTTGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS GCA 72 bp | CTCTCCACAGGCTTCCAAACTCCAATTTTCCTGTCGTaGCTCTGCAGTAACAGCTCATCCGCTATGTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSTGFQTPIFLS*LCSNSSSAMSF Trigger: GAAAGACATAGCGGATGAGCTGTTACTGCAGAGGCACGACAGGAAAATTGGAGTTTGGAAGCCTGTGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS CCA 72 bp | TCCATCATCAAAAATCTCAGAAGCTGTGGCAATAACTaGGGATGCAGTCTGGTGGTGGGGTATACAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SIIKNLRSCGNN*GCSLVVGYTAG Trigger: CCCTGCTGTATACCCCACCACCAGACTGCATCCCCAGTTATTGCCACAGCTTCTGAGATTTTTGATGATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS TCA 72 bp | CTTCCCTTCCTGATGGAGTCCAATGTCGAAACTGGCTaGCGGAGCAATGTAAGTGGCAAAAAGATATTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LPFLMESNVETG*RSNVSGKKILG Trigger: GCCCAATATCTTTTTGCCACTTACATTGCTCCGTCAGCCAGTTTCGACATTGGACTCCATCAGGAAGGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172737.2 ENSMUST00000172831.8 |
||
| CDS CCA 72 bp | CATCCGAGAGGGACAGCTTGGCCATTGCATACCCAGTaGTGTCCTCAGCCTTCTTGGAAATTGTTTCTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: HPRGTAWPLHTQ*CPQPSWKLFLY Trigger: ATAAAGAAACAATTTCCAAGAAGGCTGAGGACACCACTGGGTATGCAATGGCCAAGCTGTCCCTCTCGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172737.2 ENSMUST00000172831.8 |
||
| CDS TCA 72 bp | AAGAATTCGCTCTTGTTCCAAGGCTTCTATGTACTTTaGATAACACCAGGTTGGCTGCCGGCCATAGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: KNSLLFQGFYVL*ITPGWLPAIGL Trigger: CAGTCCTATGGCCGGCAGCCAACCTGGTGTTATTCAAAGTACATAGAAGCCTTGGAACAAGAGCGAATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS GCA 72 bp | ACAGGTTTTGTAAGAGAGCCTGTAGTACTTGCATACTaGTTAACTCCACTCTTTCCCGCCTTGTCCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TGFVREPVVLAY*LTPLFPALSSS Trigger: AGAAGAGGACAAGGCGGGAAAGAGTGGAGTTAAGCAGTATGCAAGTACTACAGGCTCTCTTACAAAACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
||
| CDS CAA 72 bp | TGCCTGTGCTGCTCCATGTTGCTTGCGAGATCAACTTaGCTAACCTGTATTCAAAGTAGCAATCGCTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CLCCSMLLARST*LTCIQSSNRFP Trigger: TGGAAAGCGATTGCTACTTTGAATACAGGTTAGCAAAGTTGATCTCGCAAGCAACATGGAGCAGCACAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS GCA 72 bp | ATGTTTTTCAAGTGGTCTGCTGTCCACCGGGATCCATaGAGCAGCTTAAACTTCGATAAGATTTCTGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: MFFKWSAVHRDP*SSLNFDKISAE Trigger: TTCTGCAGAAATCTTATCGAAGTTTAAGCTGCTGCATGGATCCCGGTGGACAGCAGACCACTTGAAAAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS CCA 72 bp | CTTTCTTCCCTTCCTGATGGAGTCCAATGTCGAAACTaGCTGACGGAGCAATGTAAGTGGCAAAAAGATATT | + |
|
Preference number: 6 (lower is better) Translates to: LSSLPDGVQCRN*LTEQCKWQKDI Trigger: AATATCTTTTTGCCACTTACATTGCTCCGTCAGCCAGTTTCGACATTGGACTCCATCAGGAAGGGAAGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172737.2 ENSMUST00000172831.8 |
||
| CDS GCA 72 bp | TCCAGTTTGTTGTTAAGTAGGTCAGTAAAAGTAAAGTaGTTGTACCCCTCAGGGACATTCAGCCAGTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLLLSRSVKVK*LYPSGTFSQYS Trigger: AGAGTACTGGCTGAATGTCCCTGAGGGGTACAAGCACTTTACTTTTACTGACCTACTTAACAACAAACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172737.2 ENSMUST00000172831.8 |
||
| CDS CAA 72 bp | TGCCGGAAGTCTTTCCCTTTTGATCCAATTAATACCTaGTTCACGCTTGAGACACATGATGCTGTAGTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: CRKSFPFDPINT*FTLETHDAVVD Trigger: GTCAACTACAGCATCATGTGTCTCAAGCGTGAACAAGGTATTAATTGGATCAAAAGGGAAAGACTTCCGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS CAA 72 bp | CAATCGCTTTCCAGAAATGCCGGAAGTCTTTCCCTTTaGATCCAATTAATACCTTGTTCACGCTTGAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: QSLSRNAGSLSL*IQLIPCSRLRH Trigger: GTGTCTCAAGCGTGAACAAGGTATTAATTGGATCAAAAGGGAAAGACTTCCGGCATTTCTGGAAAGCGATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
||
| CDS CAA 90 bp | TTCCAGAAATGCCGGAAGTCTTTCCCTTTTGATCCAATTAATACCTaGTTCACGCTTGAGACACATGATGCTGTAGTTGACATTGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: FQKCRKSFPFDPINT*FTLETHDAVVDIDG Trigger: GCCATCAATGTCAACTACAGCATCATGTGTCTCAAGCGTGAACAAGGTATTAATTGGATCAAAAGGGAAAGACTTCCGGCATTTCTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS CAA 72 bp | AGTTTGTTGTTAAGTAGGTCAGTAAAAGTAAAGTGCTaGTACCCCTCAGGGACATTCAGCCAGTACTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: SLLLSRSVKVKC*YPSGTFSQYSV Trigger: AACAGAGTACTGGCTGAATGTCCCTGAGGGGTACAAGCACTTTACTTTTACTGACCTACTTAACAACAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172737.2 ENSMUST00000172831.8 |
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| CDS CAA 90 bp | TCAAATTCCAGTTTGTTGTTAAGTAGGTCAGTAAAAGTAAAGTGCTaGTACCCCTCAGGGACATTCAGCCAGTACTCTGTTTGTTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: SNSSLLLSRSVKVKC*YPSGTFSQYSVCLE Trigger: CTCTAAACAAACAGAGTACTGGCTGAATGTCCCTGAGGGGTACAAGCACTTTACTTTTACTGACCTACTTAACAACAAACTGGAATTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172737.2 ENSMUST00000172831.8 |
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| CDS TCA 72 bp | CTGTTCGATATCTATCCAACACATAAGGTCAAGGCTTaGAGAATGAGACTCAAGAAACTGACGGAAATGTTC | + |
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Preference number: 6 (lower is better) Translates to: LFDIYPTHKVKA*RMRLKKLTEMF Trigger: GAACATTTCCGTCAGTTTCTTGAGTCTCATTCTTCAAGCCTTGACCTTATGTGTTGGATAGATATCGAACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS TCA 72 bp | TCATCCGCTATGTCTTTCATCTGTGTCTTTATCTTCTaGCGTGATGCAAACTGTTCACTCGAGAGAAACAAT | + |
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Preference number: 6 (lower is better) Translates to: SSAMSFICVFIF*RDANCSLERNN Trigger: ATTGTTTCTCTCGAGTGAACAGTTTGCATCACGTCAGAAGATAAAGACACAGATGAAAGACATAGCGGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS CAA 72 bp | GAGTTAATGAAGCAGTTGATGATGGTTGTAATCTTCTaGTGGATGATAGATTCGTCACAATGTGAGTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: ELMKQLMMVVIF*WMIDSSQCEWH Trigger: GTGCCACTCACATTGTGACGAATCTATCATCCACAAGAAGATTACAACCATCATCAACTGCTTCATTAACTC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
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| CDS TCA 72 bp | AAGTGGCAAAAAGATATTGGGCTTGCTTGCATACTTTaGAAGGTTGAAGTGTTTCTTGGTAGAACAGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: KWQKDIGLACIL*KVEVFLGRTAD Trigger: ATCAGCTGTTCTACCAAGAAACACTTCAACCTTTCAAAGTATGCAAGCAAGCCCAATATCTTTTTGCCACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172737.2 ENSMUST00000172831.8 |
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| CDS CAA 90 bp | GAATTTAGTAAAGAAGAATCCCGCTCTGTTTTCTACATACAAAGATaGCAACAAGTTTTCCATGTCAAATCCTCCCAAGGCTCCAACATT | + |
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Preference number: 6 (lower is better) Translates to: EFSKEESRSVFYIQR*QQVFHVKSSQGSNI Trigger: AATGTTGGAGCCTTGGGAGGATTTGACATGGAAAACTTGTTGCAATCTTTGTATGTAGAAAACAGAGCGGGATTCTTCTTTACTAAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172737.2 ENSMUST00000172831.8 |
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| CDS TCA 72 bp | CCAGTCTTTTGTTTGAGTATAGGAAGCCTGGCCAAGTaGAACGTAGAACTTCTTCATAATCATATAATTGTC | + |
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Preference number: 6 (lower is better) Translates to: PVFCLSIGSLAK*NVELLHNHIIV Trigger: GACAATTATATGATTATGAAGAAGTTCTACGTTTCACTTGGCCAGGCTTCCTATACTCAAACAAAAGACTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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| CDS TCA 72 bp | TGTAATCTTCTTGTGGATGATAGATTCGTCACAATGTaGGTGGCACAAATCCTTAAACTTTTGTACTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: CNLLVDDRFVTM*VAQILKLLYFL Trigger: CAAGAAGTACAAAAGTTTAAGGATTTGTGCCACTCACATTGTGACGAATCTATCATCCACAAGAAGATTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172831.8 ENSMUST00000173018.8 |
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| CDS CAA 72 bp | TCTCTGAACTTAAACTTACATTCTCCAATCTATCTTTaGAGATTTCCTCTACCATTTCAACAGGGGGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: SLNLNLHSPIYL*RFPLPFQQGVK Trigger: TTTCACCCCCTGTTGAAATGGTAGAGGAAATCTCAAAAGATAGATTGGAGAATGTAAGTTTAAGTTCAGAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172831.8 |
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