Pregenerated sensors for RGS20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002459Ensembl transcript IDs: ENSMUST00000002533.15, ENSMUST00000118000.8, ENSMUST00000119256.8, ENSMUST00000147158.2, ENSMUST00000170566.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACACACACACACACACACACACACACACACACACACTTGGATGCATaGATGCACAGAGGGAGGGAGGGAAAGAGGGAGAGAGAGAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: THTHTHTHTHTHLDA*MHRGREGKRERERG Trigger: CCCCCTCTCTCTCTCCCTCTTTCCCTCCCTCCCTCTGTGCATGCATGCATCCAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR CCA 90 bp | AATGCATTTCTTCCGGCTGGAGTGACCATCAGGTTATCAAAAGACTaGGCCCAGGCACAGACTTCTTCCAGAGTAGGCGTGGGGCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: NAFLPAGVTIRLSKD*AQAQTSSRVGVGLS Trigger: AGAAAGCCCCACGCCTACTCTGGAAGAAGTCTGTGCCTGGGCCCAGTCTTTTGATAACCTGATGGTCACTCCAGCCGGAAGAAATGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170566.2 |
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| 3UTR GCA 90 bp | TGCTCTTTGTACATCTGTGCTGCAGGCAGAACAGAGACTAGTACATaGTCTGCCCTTGAGAACATGCTACTGTTATGTGAATGTGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: CSLYICAAGRTETST*SALENMLLLCECEH Trigger: GTGCTCACATTCACATAACAGTAGCATGTTCTCAAGGGCAGAGCATGTACTAGTCTCTGTTCTGCCTGCAGCACAGATGTACAAAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGGATGGATCCACCATGTTTCTGTTGATAACCTCTCGTACTCGGGAGTCCAGGTTATCAAAAGACTaGGCCCAGGCACAGACTTCT | + |
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Preference number: 2 (lower is better) Translates to: CWDGSTMFLLITSRTRESRLSKD*AQAQTS Trigger: AGAAGTCTGTGCCTGGGCCCAGTCTTTTGATAACCT...GGACTCCCGAGTACGAGAGGTTATCAACAGAAACATGGTGGATCCATCCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170566.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGGGATGGATCCACCATGTTTCTGTTGATAACCTCTCGTACTCGGGAGTCCAAGAAATTCCCGGAATaGATTTCTTCCGGCTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: CWDGSTMFLLITSRTRESKKFPE*ISSGWS Trigger: ACTCCAGCCGGAAGAAATGCATTCCGGGAATTTCTT...GGACTCCCGAGTACGAGAGGTTATCAACAGAAACATGGTGGATCCATCCCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170566.2 |
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| 3UTR CAA 90 bp | ACATCTGTGCTGCAGGCAGAACAGAGACTAGTACATGCTCTGCCCTaGAGAACATGCTACTGTTATGTGAATGTGAGCACACTATCTTTC | + |
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Preference number: 2 (lower is better) Translates to: TSVLQAEQRLVHALP*RTCYCYVNVSTLSF Trigger: GAAAGATAGTGTGCTCACATTCACATAACAGTAGCATGTTCTCAAGGGCAGAGCATGTACTAGTCTCTGTTCTGCCTGCAGCACAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTCTCGTACTCGGGAGTCCAAGCTGACCTCTTTAGGAGAGAGAATAGAAATAGGGGCTTTCTTCACATaGTGGAATGTCTGTTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: TSRTRESKLTSLGERIEIGAFFT*WNVCSD Trigger: ATCAGAACAGACATTCCAGCATGTGAAGAAAGCCCC...TATTTCTATTCTCTCTCCTAAAGAGGTCAGCTTGGACTCCCGAGTACGAGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170566.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGCAGAACAGAGACTAGTACATGCTCTGCCCTTGAGAACATGCTACTGTTAGCTAGCTGTAGTCCATaGGTTATTTTCTTGTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: AGRTETSTCSALENMLLLASCSP*VIFLFC Trigger: ACAAAACAAGAAAATAACTCATGGACTACAGCTAGC...TAACAGTAGCATGTTCTCAAGGGCAGAGCATGTACTAGTCTCTGTTCTGCCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTTAGTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGCTCTTTGTACATCTGTaGTGCAGGCAGAACAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: GLVEEDLNAVSLEGNTVLLFVHL*CRQNRD Trigger: GTCTCTGTTCTGCCTGCAGCACAGATGTACAAAGAG...CAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAACTAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTTAGTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGACAGAGACTAGTACATaGTCTGCCCTTGAGAACATG | + |
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Preference number: 2 (lower is better) Translates to: GLVEEDLNAVSLEGNTVLTETST*SALENM Trigger: CATGTTCTCAAGGGCAGAGCATGTACTAGTCTCTGT...CAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAACTAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTCTCGTACTCGGGAGTCCAAGCTGACCTCTTTAGGAGAGAGAATAGAAATACTCATAGATTATCCTTaGTTTCTCCTCAATAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: TSRTRESKLTSLGERIEILIDYP*FLLNSA Trigger: AGCACTATTGAGGAGAAAGCAAGGATAATCTATGAG...TATTTCTATTCTCTCTCCTAAAGAGGTCAGCTTGGACTCCCGAGTACGAGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170566.2 |
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| 3UTR-3UTR TCA 90 bp | TCATGCAAAAGAAAGTGTTCCCATTTGCTCTTTGTACATCTGTGCTGCAGGCAGGCTAGCTGTAGTCCATaGGTTATTTTCTTGTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: SCKRKCSHLLFVHLCCRQASCSP*VIFLFC Trigger: ACAAAACAAGAAAATAACTCATGGACTACAGCTAGC...CTGCCTGCAGCACAGATGTACAAAGAGCAAATGGGAACACTTTCTTTTGCATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTCTTTGGAGGGTAATACAGTATTGAACTCATGCAAAAGAAAGTGTTCCCATCTCTTTGTACATCTGTaGTGCAGGCAGAACAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: VSLEGNTVLNSCKRKCSHLFVHL*CRQNRD Trigger: GTCTCTGTTCTGCCTGCAGCACAGATGTACAAAGAG...ATGGGAACACTTTCTTTTGCATGAGTTCAATACTGTATTACCCTCCAAAGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR CAA 90 bp | CCAAGTGAAGTATTCAGAATGAAGGAAGGCTTAGTTGAGGAAGATTaGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGAACTCATGC | + |
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Preference number: 2 (lower is better) Translates to: PSEVFRMKEGLVEED*NAVSLEGNTVLNSC Trigger: GCATGAGTTCAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAACTAAGCCTTCCTTCATTCTGAATACTTCACTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR-3UTR CCA 90 bp | TCATGCAAAAGAAAGTGTTCCCATTTGCTCTTTGTACATCTGTGCTGCAGGCAGATCTATAGCTTTCTGTaGAGGAGGAATCTGTTATTA | + |
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Preference number: 2 (lower is better) Translates to: SCKRKCSHLLFVHLCCRQIYSFL*RRNLLL Trigger: TAATAACAGATTCCTCCTCCACAGAAAGCTATAGAT...CTGCCTGCAGCACAGATGTACAAAGAGCAAATGGGAACACTTTCTTTTGCATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR CAA 90 bp | AGAATGAAGGAAGGCTTAGTTGAGGAAGATTTGAATGCCGTTTCTTaGGAGGGTAATACAGTATTGAACTCATGCAAAAGAAAGTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: RMKEGLVEEDLNAVS*EGNTVLNSCKRKCS Trigger: GGAACACTTTCTTTTGCATGAGTTCAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAACTAAGCCTTCCTTCATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGAACTCAGAAAGTGTTCCCATTTaGTCTTTGTACATCTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: VEEDLNAVSLEGNTVLNSESVPI*SLYICA Trigger: AGCACAGATGTACAAAGAGCAAATGGGAACACTTTC...TGAGTTCAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGAACTCAATCTATAGCTTTCTGTaGAGGAGGAATCTGTTATTA | + |
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Preference number: 2 (lower is better) Translates to: VEEDLNAVSLEGNTVLNSIYSFL*RRNLLL Trigger: TAATAACAGATTCCTCCTCCACAGAAAGCTATAGAT...TGAGTTCAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR CCA 72 bp | CTTCCGGCTGGAGTGACCATCAGGTTATCAAAAGACTaGGCCCAGGCACAGACTTCTTCCAGAGTAGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: LPAGVTIRLSKD*AQAQTSSRVGV Trigger: CACGCCTACTCTGGAAGAAGTCTGTGCCTGGGCCCAGTCTTTTGATAACCTGATGGTCACTCCAGCCGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170566.2 |
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| 3UTR CCA 72 bp | GATCTGCAGTTGAGCGTCATCGAATATGTGCTGGGATaGATCCACCATGTTTCTGTTGATAACCTCTCGTAC | + |
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Preference number: 3 (lower is better) Translates to: DLQLSVIEYVLG*IHHVSVDNLSY Trigger: GTACGAGAGGTTATCAACAGAAACATGGTGGATCCATCCCAGCACATATTCGATGACGCTCAACTGCAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170566.2 |
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| 3UTR GCA 72 bp | TACATCTGTGCTGCAGGCAGAACAGAGACTAGTACATaGTCTGCCCTTGAGAACATGCTACTGTTATGTGAA | + |
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Preference number: 3 (lower is better) Translates to: YICAAGRTETST*SALENMLLLCE Trigger: TTCACATAACAGTAGCATGTTCTCAAGGGCAGAGCATGTACTAGTCTCTGTTCTGCCTGCAGCACAGATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGAAAGTGTTCCCATTTGCTCTTTGTACATCTGTGCTGCAGGCAGAACAGAGGTACATGCTCTGCCCTaGAGAACATGCTACTGTTAT | + |
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Preference number: 3 (lower is better) Translates to: KESVPICSLYICAAGRTEVHALP*RTCYCY Trigger: ATAACAGTAGCATGTTCTCAAGGGCAGAGCATGTAC...CTCTGTTCTGCCTGCAGCACAGATGTACAAAGAGCAAATGGGAACACTTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGAACTCAGTTCCCATTTGCTCTTaGTACATCTGTGCTGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: VEEDLNAVSLEGNTVLNSVPICS*YICAAG Trigger: GCCTGCAGCACAGATGTACAAAGAGCAAATGGGAAC...TGAGTTCAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR GCA 72 bp | GAACAGAGACTAGTACATGCTCTGCCCTTGAGAACATaGTACTGTTATGTGAATGTGAGCACACTATCTTTC | + |
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Preference number: 3 (lower is better) Translates to: EQRLVHALPLRT*YCYVNVSTLSF Trigger: GAAAGATAGTGTGCTCACATTCACATAACAGTAGCATGTTCTCAAGGGCAGAGCATGTACTAGTCTCTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGAACTCAGTACATGCTCTGCCCTaGAGAACATGCTACTGTTAT | + |
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Preference number: 3 (lower is better) Translates to: VEEDLNAVSLEGNTVLNSVHALP*RTCYCY Trigger: ATAACAGTAGCATGTTCTCAAGGGCAGAGCATGTAC...TGAGTTCAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR-3UTR CAA 90 bp | AGCTTGATAGATTCTGATAATACAGTCACCCTTTCACTTAAGTGTTGTTTTCCTGTTCCCATTTGCTCTTaGTACATCTGTGCTGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: SLIDSDNTVTLSLKCCFPVPICS*YICAAG Trigger: GCCTGCAGCACAGATGTACAAAGAGCAAATGGGAAC...AGGAAAACAACACTTAAGTGAAAGGGTGACTGTATTATCAGAATCTATCAAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGAACAGAGACTAGTACATGCTCTGCCCTTGAGAACATGCTACTGTTAGCCACCCTGCTGGCTTaGGGCAGGGCCCTGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: AGRTETSTCSALENMLLLATLLA*GRALGL Trigger: GAGACCCAGGGCCCTGCCCCAAGCCAGCAGGGTGGC...TAACAGTAGCATGTTCTCAAGGGCAGAGCATGTACTAGTCTCTGTTCTGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| CDS-3UTR TCA 90 bp | GCAGGCAGAACAGAGACTAGTACATGCTCTGCCCTTGAGAACATGCTACTGTTAGGCCAGGAGCTTGGCTaGGAGGGAAAGTCCCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: AGRTETSTCSALENMLLLGQELG*EGKSLR Trigger: GCGCAGGGACTTTCCCTCTCAGCCAAGCTCCTGGCC...TAACAGTAGCATGTTCTCAAGGGCAGAGCATGTACTAGTCTCTGTTCTGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
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| CDS-3UTR CCA 90 bp | GGCTTAGTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGGCCACCCTGCTGGCTTaGGGCAGGGCCCTGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GLVEEDLNAVSLEGNTVLATLLA*GRALGL Trigger: GAGACCCAGGGCCCTGCCCCAAGCCAGCAGGGTGGC...CAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAACTAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| CDS-3UTR CCA 90 bp | CCAGGCACAGACTTCTTCCAGAGTAGGCGTGGGGCTTTCTTCACATGCTGGAATTCATGGGAGGCTCTTTaGGGTCTCTGGTCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PGTDFFQSRRGAFFTCWNSWEAL*GLWSSW Trigger: CCAAGAAGACCAGAGACCCCAAAGAGCCTCCCATGA...ATTCCAGCATGTGAAGAAAGCCCCACGCCTACTCTGGAAGAAGTCTGTGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170566.2 |
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| CDS-3UTR CCA 90 bp | ATGCAAAAGAAAGTGTTCCCATTTGCTCTTTGTACATCTGTGCTGCAGGCAGAAGAGGCGGTGGGGCTCTaGAGAGAGCCAGGCAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: MQKKVFPFALCTSVLQAEEAVGL*REPGSR Trigger: CCTACTGCCTGGCTCTCTCCAGAGCCCCACCGCCTC...TTCTGCCTGCAGCACAGATGTACAAAGAGCAAATGGGAACACTTTCTTTTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
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| CDS-3UTR CCA 90 bp | GTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGAACTCACTTGGGGCAGGGCCCTaGGTCTCACTTCCGCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: VEEDLNAVSLEGNTVLNSLGAGP*VSLPPH Trigger: GTGCGGCGGAAGTGAGACCCAGGGCCCTGCCCCAAG...TGAGTTCAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| CDS-3UTR CCA 90 bp | ATGCAAAAGAAAGTGTTCCCATTTGCTCTTTGTACATCTGTGCTGCAGGCAGAAAGGAACAGGAGGCGGTaGGGCTCTGGAGAGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: MQKKVFPFALCTSVLQAERNRRR*GSGESQ Trigger: CTGGCTCTCTCCAGAGCCCCACCGCCTCCTGTTCCT...TTCTGCCTGCAGCACAGATGTACAAAGAGCAAATGGGAACACTTTCTTTTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
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| CDS-3UTR GCA 90 bp | GGCTTAGTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGGAGGGGCAGCAACTGTaGCTGTGCAGCCTGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: GLVEEDLNAVSLEGNTVLEGQQL*LCSLPG Trigger: ACCAGGCAGGCTGCACAGGCACAGTTGCTGCCCCTC...CAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAACTAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
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| CDS-3UTR GCA 90 bp | GTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGAACTCAGAGAGGGAAAGTCCCTaGGCCCAGGCAAGCCACGGG | + |
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Preference number: 4 (lower is better) Translates to: VEEDLNAVSLEGNTVLNSERESP*AQASHG Trigger: CCCGTGGCTTGCCTGGGCGCAGGGACTTTCCCTCTC...TGAGTTCAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
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| CDS-3UTR CCA 90 bp | GTTTCTTTGGAGGGTAATACAGTATTGAACTCATGCAAAAGAAAGTGTTCCCATCTTGGGGCAGGGCCCTaGGTCTCACTTCCGCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: VSLEGNTVLNSCKRKCSHLGAGP*VSLPPH Trigger: GTGCGGCGGAAGTGAGACCCAGGGCCCTGCCCCAAG...ATGGGAACACTTTCTTTTGCATGAGTTCAATACTGTATTACCCTCCAAAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| 3UTR CAA 72 bp | TCGAATATGTGCTGGGATGGATCCACCATGTTTCTGTaGATAACCTCTCGTACTCGGGAGTCCAAGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: SNMCWDGSTMFL*ITSRTRESKLT Trigger: GGTCAGCTTGGACTCCCGAGTACGAGAGGTTATCAACAGAAACATGGTGGATCCATCCCAGCACATATTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170566.2 |
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| CDS-3UTR CCA 90 bp | AAAGAAAGTGTTCCCATTTGCTCTTTGTACATCTGTGCTGCAGGCAGAACAGAGTCATGGGAGGCTCTTTaGGGTCTCTGGTCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: KESVPICSLYICAAGRTESWEAL*GLWSSW Trigger: CCAAGAAGACCAGAGACCCCAAAGAGCCTCCCATGA...CTCTGTTCTGCCTGCAGCACAGATGTACAAAGAGCAAATGGGAACACTTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| CDS-3UTR CCA 90 bp | ATGCAAAAGAAAGTGTTCCCATTTGCTCTTTGTACATCTGTGCTGCAGGCAGAAAGTAGGCCAGGAGCTTaGCTGAGAGGGAAAGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: MQKKVFPFALCTSVLQAESRPGA*LRGKVP Trigger: AGGGACTTTCCCTCTCAGCCAAGCTCCTGGCCTACT...TTCTGCCTGCAGCACAGATGTACAAAGAGCAAATGGGAACACTTTCTTTTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
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| CDS-3UTR TCA 90 bp | GGCTTAGTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGCTCAGGGGACTCGGGTaGACTCTTTTCAGTACAGGC | + |
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Preference number: 4 (lower is better) Translates to: GLVEEDLNAVSLEGNTVLLRGLG*TLFSTG Trigger: GCCTGTACTGAAAAGAGTTCACCCGAGTCCCCTGAG...CAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAACTAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGAACAGAGACTAGTACATGCTCTGCCCTTGAGAACATGCTACTGTTATCTTCTAGGTACCCTTaGTTTTCTTGGGAAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: AGRTETSTCSALENMLLLSSRYP*FSWERL Trigger: CAGCCTTTCCCAAGAAAACCAAGGGTACCTAGAAGA...TAACAGTAGCATGTTCTCAAGGGCAGAGCATGTACTAGTCTCTGTTCTGCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
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| 3UTR CAA 72 bp | CTGCAGGCAGAACAGAGACTAGTACATGCTCTGCCCTaGAGAACATGCTACTGTTATGTGAATGTGAGCACA | + |
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Preference number: 4 (lower is better) Translates to: LQAEQRLVHALP*RTCYCYVNVST Trigger: TGTGCTCACATTCACATAACAGTAGCATGTTCTCAAGGGCAGAGCATGTACTAGTCTCTGTTCTGCCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| CDS-3UTR CCA 90 bp | AAAGAAAGTGTTCCCATTTGCTCTTTGTACATCTGTGCTGCAGGCAGAACAGAGAGGTTATCAAAAGACTaGGCCCAGGCACAGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: KESVPICSLYICAAGRTERLSKD*AQAQTS Trigger: AGAAGTCTGTGCCTGGGCCCAGTCTTTTGATAACCT...CTCTGTTCTGCCTGCAGCACAGATGTACAAAGAGCAAATGGGAACACTTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| CDS-3UTR GCA 90 bp | AAAGAAAGTGTTCCCATTTGCTCTTTGTACATCTGTGCTGCAGGCAGAACAGAGGGGGCTTTCTTCACATaGTGGAATGTCTGTTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: KESVPICSLYICAAGRTEGAFFT*WNVCSD Trigger: ATCAGAACAGACATTCCAGCATGTGAAGAAAGCCCC...CTCTGTTCTGCCTGCAGCACAGATGTACAAAGAGCAAATGGGAACACTTTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
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| CDS-3UTR GCA 90 bp | TCATGCAAAAGAAAGTGTTCCCATTTGCTCTTTGTACATCTGTGCTGCAGGCAGAAGAAATTCCCGGAATaGATTTCTTCCGGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SCKRKCSHLLFVHLCCRQKKFPE*ISSGWS Trigger: ACTCCAGCCGGAAGAAATGCATTCCGGGAATTTCTT...CTGCCTGCAGCACAGATGTACAAAGAGCAAATGGGAACACTTTCTTTTGCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTAGTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGGCGTCATCGAATATGTaGTGGGATGGATCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: GLVEEDLNAVSLEGNTVLASSNM*WDGSTM Trigger: CATGGTGGATCCATCCCAGCACATATTCGATGACGC...CAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAACTAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR GCA 90 bp | GTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGAACTCATGTGCCTGTGCAGCCTaGCTGGTAAGATGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VEEDLNAVSLEGNTVLNSCACAA*LVRCSS Trigger: AGAAGAGCATCTTACCAGGCAGGCTGCACAGGCACA...TGAGTTCAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGCAGAACAGAGACTAGTACATGCTCTGCCCTTGAGAACATGCTACTGTTAATTATAATCTTTCTCTaGTCTGAAGAGGGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGRTETSTCSALENMLLLIIIFL*SEEGQQ Trigger: TTGCTGCCCCTCTTCAGAGCAGAGAAAGATTATAAT...TAACAGTAGCATGTTCTCAAGGGCAGAGCATGTACTAGTCTCTGTTCTGCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAGAACAGAGACTAGTACATGCTCTGCCCTTGAGAACATGCTACTGTTAGCTTTCTTCACATGCTaGAATGTCTGTTCTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGRTETSTCSALENMLLLAFFTC*NVCSDF Trigger: GAAATCAGAACAGACATTCCAGCATGTGAAGAAAGC...TAACAGTAGCATGTTCTCAAGGGCAGAGCATGTACTAGTCTCTGTTCTGCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR GCA 90 bp | GTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGAACTCAGCGTCATCGAATATGTaGTGGGATGGATCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: VEEDLNAVSLEGNTVLNSASSNM*WDGSTM Trigger: CATGGTGGATCCATCCCAGCACATATTCGATGACGC...TGAGTTCAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTGATAGATTCTGATAATACAGTCACCCTTTCACTTAAGTGTTGTTTTCCTCAGCAACTGTGCCTGTaGAGCCTGCCTGGTAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLIDSDNTVTLSLKCCFPQQLCL*SLPGKM Trigger: CATCTTACCAGGCAGGCTGCACAGGCACAGTTGCTG...AGGAAAACAACACTTAAGTGAAAGGGTGACTGTATTATCAGAATCTATCAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTAGTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGAGGTTATCAAAAGACTaGGCCCAGGCACAGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLVEEDLNAVSLEGNTVLRLSKD*AQAQTS Trigger: AGAAGTCTGTGCCTGGGCCCAGTCTTTTGATAACCT...CAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAACTAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR CCA 90 bp | TCATGCAAAAGAAAGTGTTCCCATTTGCTCTTTGTACATCTGTGCTGCAGGCAGGAATATGTGCTGGGATaGATCCACCATGTTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SCKRKCSHLLFVHLCCRQEYVLG*IHHVSV Trigger: AACAGAAACATGGTGGATCCATCCCAGCACATATTC...CTGCCTGCAGCACAGATGTACAAAGAGCAAATGGGAACACTTTCTTTTGCATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR CCA 90 bp | TCATGCAAAAGAAAGTGTTCCCATTTGCTCTTTGTACATCTGTGCTGCAGGCAGTCATCGAATATGTGCTaGGATGGATCCACCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SCKRKCSHLLFVHLCCRQSSNMC*DGSTMF Trigger: AAACATGGTGGATCCATCCCAGCACATATTCGATGA...CTGCCTGCAGCACAGATGTACAAAGAGCAAATGGGAACACTTTCTTTTGCATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTAGTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGGGGGCTTTCTTCACATaGTGGAATGTCTGTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLVEEDLNAVSLEGNTVLGAFFT*WNVCSD Trigger: ATCAGAACAGACATTCCAGCATGTGAAGAAAGCCCC...CAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAACTAAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTGATAGATTCTGATAATACAGTCACCCTTTCACTTAAGTGTTGTTTTCCTTCATGGGAGGCTCTTTaGGGTCTCTGGTCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLIDSDNTVTLSLKCCFPSWEAL*GLWSSW Trigger: CCAAGAAGACCAGAGACCCCAAAGAGCCTCCCATGA...AGGAAAACAACACTTAAGTGAAAGGGTGACTGTATTATCAGAATCTATCAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCTTTGGAGGGTAATACAGTATTGAACTCATGCAAAAGAAAGTGTTCCCATGCTCTTTGGGGTCTCTaGTCTTCTTGGTTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: VSLEGNTVLNSCKRKCSHALWGL*SSWFLT Trigger: TGTCAGAAACCAAGAAGACCAGAGACCCCAAAGAGC...ATGGGAACACTTTCTTTTGCATGAGTTCAATACTGTATTACCCTCCAAAGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTAGTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGGAATATGTGCTGGGATaGATCCACCATGTTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLVEEDLNAVSLEGNTVLEYVLG*IHHVSV Trigger: AACAGAAACATGGTGGATCCATCCCAGCACATATTC...CAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAACTAAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR GCA 90 bp | GTTTCTTTGGAGGGTAATACAGTATTGAACTCATGCAAAAGAAAGTGTTCCCATAAGAAATTCCCGGAATaGATTTCTTCCGGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSLEGNTVLNSCKRKCSHKKFPE*ISSGWS Trigger: ACTCCAGCCGGAAGAAATGCATTCCGGGAATTTCTT...ATGGGAACACTTTCTTTTGCATGAGTTCAATACTGTATTACCCTCCAAAGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTAGTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGCTCATAGATTATCCTTaGTTTCTCCTCAATAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLVEEDLNAVSLEGNTVLLIDYP*FLLNSA Trigger: AGCACTATTGAGGAGAAAGCAAGGATAATCTATGAG...CAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAACTAAGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR CCA 90 bp | GTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGAACTCAGCTTTCTTCACATGCTaGAATGTCTGTTCTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VEEDLNAVSLEGNTVLNSAFFTC*NVCSDF Trigger: GAAATCAGAACAGACATTCCAGCATGTGAAGAAAGC...TGAGTTCAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCTTTGGAGGGTAATACAGTATTGAACTCATGCAAAAGAAAGTGTTCCCATTCATCGAATATGTGCTaGGATGGATCCACCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSLEGNTVLNSCKRKCSHSSNMC*DGSTMF Trigger: AAACATGGTGGATCCATCCCAGCACATATTCGATGA...ATGGGAACACTTTCTTTTGCATGAGTTCAATACTGTATTACCCTCCAAAGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| 3UTR CAA 72 bp | GAAGGCTTAGTTGAGGAAGATTTGAATGCCGTTTCTTaGGAGGGTAATACAGTATTGAACTCATGCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGLVEEDLNAVS*EGNTVLNSCKR Trigger: TCTTTTGCATGAGTTCAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAACTAAGCCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| 3UTR CAA 72 bp | GTATTCAGAATGAAGGAAGGCTTAGTTGAGGAAGATTaGAATGCCGTTTCTTTGGAGGGTAATACAGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: VFRMKEGLVEED*NAVSLEGNTVL Trigger: CAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAACTAAGCCTTCCTTCATTCTGAATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| 3UTR CAA 72 bp | ATGACAAGCTTTGGACTTCAAAATTCACTCTTCAGCTaGATAGATTCTGATAATACAGTCACCCTTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: MTSFGLQNSLFS*IDSDNTVTLSL Trigger: AAGTGAAAGGGTGACTGTATTATCAGAATCTATCAAGCTGAAGAGTGAATTTTGAAGTCCAAAGCTTGTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS CCA 90 bp | CAGGCGTTGGAGCCCCGGCCACCCTGCTGGCTTGGGGCAGGGCCCTaGGTCTCACTTCCGCCGCACATCTGCCGCATCCGCATTTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: QALEPRPPCWLGAGP*VSLPPHICRIRISV Trigger: GACGGAAATGCGGATGCGGCAGATGTGCGGCGGAAGTGAGACCCAGGGCCCTGCCCCAAGCCAGCAGGGTGGCCGGGGCTCCAACGCCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000147158.2 |
||
| CDS TCA 90 bp | CGGTGGGGCTCTGGAGAGAGCCAGGCAGTAGGCCAGGAGCTTGGCTaGGAGGGAAAGTCCCTGCGCCCAGGCAAGCCACGGGAGGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RWGSGESQAVGQELG*EGKSLRPGKPREGV Trigger: GACCCCCTCCCGTGGCTTGCCTGGGCGCAGGGACTTTCCCTCTCAGCCAAGCTCCTGGCCTACTGCCTGGCTCTCTCCAGAGCCCCACCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
||
| CDS GCA 90 bp | CAGCAGCACCAACAGAAGCAGCAGGCGTTGGAGCCCCGGCCACCCTaGTGGCTTGGGGCAGGGCCCTGGGTCTCACTTCCGCCGCACATC | + |
|
Preference number: 5 (lower is better) Translates to: QQHQQKQQALEPRPP*WLGAGPWVSLPPHI Trigger: GATGTGCGGCGGAAGTGAGACCCAGGGCCCTGCCCCAAGCCAGCAGGGTGGCCGGGGCTCCAACGCCTGCTGCTTCTGTTGGTGCTGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000119256.8 ENSMUST00000147158.2 |
||
| CDS GCA 90 bp | TGCTGGCTTGGGGCAGGGCCCTGGGTCTCACTTCCGCCGCACATCTaGCGCATCCGCATTTCCGTCCGCTCAGATCCCTCAGGCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CWLGAGPWVSLPPHI*RIRISVRSDPSGRP Trigger: TGGCCTGCCTGAGGGATCTGAGCGGACGGAAATGCGGATGCGGCAGATGTGCGGCGGAAGTGAGACCCAGGGCCCTGCCCCAAGCCAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002533.15 |
||
| CDS GCA 90 bp | TGCTGGCTTGGGGCAGGGCCCTGGGTCTCACTTCCGCCGCACATCTaGCGCATCCGCATTTCCGTCCGCTCAGATCCCTCAGGGGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: CWLGAGPWVSLPPHI*RIRISVRSDPSGDS Trigger: CGAGTCCCCTGAGGGATCTGAGCGGACGGAAATGCGGATGCGGCAGATGTGCGGCGGAAGTGAGACCCAGGGCCCTGCCCCAAGCCAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
||
| CDS GCA 90 bp | TGCTGGCTTGGGGCAGGGCCCTGGGTCTCACTTCCGCCGCACATCTaGCGCATCCGCATTTCCGTCCGCTCAGATCCCTCAGGCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: CWLGAGPWVSLPPHI*RIRISVRSDPSGLT Trigger: TGTCAAGCCTGAGGGATCTGAGCGGACGGAAATGCGGATGCGGCAGATGTGCGGCGGAAGTGAGACCCAGGGCCCTGCCCCAAGCCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147158.2 |
||
| CDS TCA 90 bp | GAAGACACAAGAACAGCTGGAGAGCAGGCTAGAAAGGTGGCGAAATaGGTCGACCCGGTGGAGTCTGGGAGCTTGACACCAGTCACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EDTRTAGEQARKVAK*VDPVESGSLTPVTA Trigger: AGCCGTGACTGGTGTCAAGCTCCCAGACTCCACCGGGTCGACTCATTTCGCCACCTTTCTAGCCTGCTCTCCAGCTGTTCTTGTGTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAAAGTGTTCCCATTTGCTCTTTGTACATCTGTGCTGCAGGCAGAACAGAGCAGAAGCAGCAGGCGTaGGAGCCCCGGCCACCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KESVPICSLYICAAGRTEQKQQA*EPRPPC Trigger: GCAGGGTGGCCGGGGCTCCAACGCCTGCTGCTTCTG...CTCTGTTCTGCCTGCAGCACAGATGTACAAAGAGCAAATGGGAACACTTTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS GCA 90 bp | CCAGGCACAGACTTCTTCCAGAGTAGGCGTGGGGCTTTCTTCACATaGTGGAATGTCTGTTCTGATTTCATGGGAGGCTCTTTGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGTDFFQSRRGAFFT*WNVCSDFMGGSLGS Trigger: AGACCCCAAAGAGCCTCCCATGAAATCAGAACAGACATTCCAGCATGTGAAGAAAGCCCCACGCCTACTCTGGAAGAAGTCTGTGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000119256.8 ENSMUST00000147158.2 |
||
| CDS GCA 90 bp | TCTTTCTCTGCTCTGAAGAGGGGCAGCAACTGTGCCTGTGCAGCCTaGCTGGTAAGATGCTCTTCTAGGTACCCTTGGTTTTCTTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SFSALKRGSNCACAA*LVRCSSRYPWFSWE Trigger: TTCCCAAGAAAACCAAGGGTACCTAGAAGAGCATCTTACCAGGCAGGCTGCACAGGCACAGTTGCTGCCCCTCTTCAGAGCAGAGAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118000.8 ENSMUST00000147158.2 |
||
| CDS CCA 90 bp | TCTGTTCTGATTTCATGGGAGGCTCTTTGGGGTCTCTGGTCTTCTTaGTTTCTGACAGTGAGGCAAGAACAGGTGCAGCAGCAGCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: SVLISWEALWGLWSS*FLTVRQEQVQQQHQ Trigger: TTGGTGCTGCTGCTGCACCTGTTCTTGCCTCACTGTCAGAAACCAAGAAGACCAGAGACCCCAAAGAGCCTCCCATGAAATCAGAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000119256.8 ENSMUST00000147158.2 |
||
| CDS CCA 90 bp | GGCGTGGGGCTTTCTTCACATGCTGGAATGTCTGTTCTGATTTCATaGGAGGCTCTTTGGGGTCTCTGGTCTTCTTGGTTTCTGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GVGLSSHAGMSVLIS*EALWGLWSSWFLTV Trigger: CACTGTCAGAAACCAAGAAGACCAGAGACCCCAAAGAGCCTCCCATGAAATCAGAACAGACATTCCAGCATGTGAAGAAAGCCCCACGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000119256.8 ENSMUST00000147158.2 |
||
| CDS-3UTR CAA 90 bp | ATGCAAAAGAAAGTGTTCCCATTTGCTCTTTGTACATCTGTGCTGCAGGCAGAAGTGGAGTCTGGGAGCTaGACACCAGTCACGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: MQKKVFPFALCTSVLQAEVESGS*TPVTAW Trigger: CCAAGCCGTGACTGGTGTCAAGCTCCCAGACTCCAC...TTCTGCCTGCAGCACAGATGTACAAAGAGCAAATGGGAACACTTTCTTTTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
||
| CDS-3UTR CAA 90 bp | TCATGCAAAAGAAAGTGTTCCCATTTGCTCTTTGTACATCTGTGCTGCAGGCAGGGGTCTCTGGTCTTCTaGGTTTCTGACAGTGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SCKRKCSHLLFVHLCCRQGSLVF*VSDSEA Trigger: TGCCTCACTGTCAGAAACCAAGAAGACCAGAGACCC...CTGCCTGCAGCACAGATGTACAAAGAGCAAATGGGAACACTTTCTTTTGCATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR CAA 90 bp | TACTCGGGAGTCCAAGCTGACCTCTTTAGGAGAGAGAATAGAAATATAGTCCTCGGGTCTCTGGTCTTCTaGGTTTCTGACAGTGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: YSGVQADLFRRENRNIVLGSLVF*VSDSEA Trigger: TGCCTCACTGTCAGAAACCAAGAAGACCAGAGACCC...GAGGACTATATTTCTATTCTCTCTCCTAAAGAGGTCAGCTTGGACTCCCGAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170566.2 |
||
| CDS-3UTR CAA 90 bp | GTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGAACTCAGTCCTGGCAGTGCCATaGAGGCCACAAGTAGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: VEEDLNAVSLEGNTVLNSVLAVP*RPQVGT Trigger: TGTTCCTACTTGTGGCCTCAATGGCACTGCCAGGAC...TGAGTTCAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
||
| CDS-3UTR CAA 90 bp | GTTGAGGAAGATTTGAATGCCGTTTCTTTGGAGGGTAATACAGTATTGAACTCATTCATGGGAGGCTCTTaGGGGTCTCTGGTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VEEDLNAVSLEGNTVLNSFMGGS*GSLVFL Trigger: CAAGAAGACCAGAGACCCCAAAGAGCCTCCCATGAA...TGAGTTCAATACTGTATTACCCTCCAAAGAAACGGCATTCAAATCTTCCTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR CAA 90 bp | AGCTTGATAGATTCTGATAATACAGTCACCCTTTCACTTAAGTGTTGTTTTCCTGGGTCTCTGGTCTTCTaGGTTTCTGACAGTGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLIDSDNTVTLSLKCCFPGSLVF*VSDSEA Trigger: TGCCTCACTGTCAGAAACCAAGAAGACCAGAGACCC...AGGAAAACAACACTTAAGTGAAAGGGTGACTGTATTATCAGAATCTATCAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR CAA 90 bp | GTTTCTTTGGAGGGTAATACAGTATTGAACTCATGCAAAAGAAAGTGTTCCCATTCCACCATGTTTCTGTaGATAACCTCTCGTACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VSLEGNTVLNSCKRKCSHSTMFL*ITSRTR Trigger: CCGAGTACGAGAGGTTATCAACAGAAACATGGTGGA...ATGGGAACACTTTCTTTTGCATGAGTTCAATACTGTATTACCCTCCAAAGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS-3UTR CAA 90 bp | AGCTTGATAGATTCTGATAATACAGTCACCCTTTCACTTAAGTGTTGTTTTCCTTCCACCATGTTTCTGTaGATAACCTCTCGTACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLIDSDNTVTLSLKCCFPSTMFL*ITSRTR Trigger: CCGAGTACGAGAGGTTATCAACAGAAACATGGTGGA...AGGAAAACAACACTTAAGTGAAAGGGTGACTGTATTATCAGAATCTATCAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 |
||
| CDS CCA 72 bp | GAGCCCCGGCCACCCTGCTGGCTTGGGGCAGGGCCCTaGGTCTCACTTCCGCCGCACATCTGCCGCATCCGC | + |
|
Preference number: 6 (lower is better) Translates to: EPRPPCWLGAGP*VSLPPHICRIR Trigger: GCGGATGCGGCAGATGTGCGGCGGAAGTGAGACCCAGGGCCCTGCCCCAAGCCAGCAGGGTGGCCGGGGCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000119256.8 ENSMUST00000147158.2 |
||
| CDS CCA 72 bp | GCAGCAGGCGTTGGAGCCCCGGCCACCCTGCTGGCTTaGGGCAGGGCCCTGGGTCTCACTTCCGCCGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: AAGVGAPATLLA*GRALGLTSAAH Trigger: ATGTGCGGCGGAAGTGAGACCCAGGGCCCTGCCCCAAGCCAGCAGGGTGGCCGGGGCTCCAACGCCTGCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000119256.8 ENSMUST00000147158.2 |
||
| CDS GCA 72 bp | GGGGCAGGGCCCTGGGTCTCACTTCCGCCGCACATCTaGCGCATCCGCATTTCCGTCCGCTCAGATCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GAGPWVSLPPHI*RIRISVRSDPS Trigger: TGAGGGATCTGAGCGGACGGAAATGCGGATGCGGCAGATGTGCGGCGGAAGTGAGACCCAGGGCCCTGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000147158.2 |
||
| CDS CCA 72 bp | GGGCTCTGGAGAGAGCCAGGCAGTAGGCCAGGAGCTTaGCTGAGAGGGAAAGTCCCTGCGCCCAGGCAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLWREPGSRPGA*LRGKVPAPRQA Trigger: GGCTTGCCTGGGCGCAGGGACTTTCCCTCTCAGCCAAGCTCCTGGCCTACTGCCTGGCTCTCTCCAGAGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
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| CDS TCA 72 bp | TCTGGAGAGAGCCAGGCAGTAGGCCAGGAGCTTGGCTaGGAGGGAAAGTCCCTGCGCCCAGGCAAGCCACGG | + |
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Preference number: 6 (lower is better) Translates to: SGESQAVGQELG*EGKSLRPGKPR Trigger: CCGTGGCTTGCCTGGGCGCAGGGACTTTCCCTCTCAGCCAAGCTCCTGGCCTACTGCCTGGCTCTCTCCAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
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| CDS TCA 72 bp | AGAACAGCTGGAGAGCAGGCTAGAAAGGTGGCGAAATaGGTCGACCCGGTGGAGTCTGGGAGCTTGACACCA | + |
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Preference number: 6 (lower is better) Translates to: RTAGEQARKVAK*VDPVESGSLTP Trigger: TGGTGTCAAGCTCCCAGACTCCACCGGGTCGACTCATTTCGCCACCTTTCTAGCCTGCTCTCCAGCTGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
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| CDS GCA 72 bp | GCTCTGAAGAGGGGCAGCAACTGTGCCTGTGCAGCCTaGCTGGTAAGATGCTCTTCTAGGTACCCTTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: ALKRGSNCACAA*LVRCSSRYPWF Trigger: AAACCAAGGGTACCTAGAAGAGCATCTTACCAGGCAGGCTGCACAGGCACAGTTGCTGCCCCTCTTCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118000.8 ENSMUST00000147158.2 |
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| CDS CCA 72 bp | AAGACACAAGAACAGCTGGAGAGCAGGCTAGAAAGGTaGCGAAATGAGTCGACCCGGTGGAGTCTGGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: KTQEQLESRLER*RNESTRWSLGA Trigger: AGCTCCCAGACTCCACCGGGTCGACTCATTTCGCCACCTTTCTAGCCTGCTCTCCAGCTGTTCTTGTGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
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| CDS GCA 72 bp | GGCAGCAACTGTGCCTGTGCAGCCTGCCTGGTAAGATaGTCTTCTAGGTACCCTTGGTTTTCTTGGGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: GSNCACAACLVR*SSRYPWFSWER Trigger: CCTTTCCCAAGAAAACCAAGGGTACCTAGAAGAGCATCTTACCAGGCAGGCTGCACAGGCACAGTTGCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118000.8 ENSMUST00000147158.2 |
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| CDS CAA 72 bp | CCCGGTGGAGTCTGGGAGCTTGACACCAGTCACGGCTaGGGATCCCTCTTTATCTTCTGTGTCTTGGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: PGGVWELDTSHG*GSLFIFCVLVN Trigger: ATTGACCAAGACACAGAAGATAAAGAGGGATCCCAAGCCGTGACTGGTGTCAAGCTCCCAGACTCCACCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
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| CDS CCA 72 bp | CCGGTGGAGTCTGGGAGCTTGACACCAGTCACGGCTTaGGATCCCTCTTTATCTTCTGTGTCTTGGTCAATA | + |
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Preference number: 6 (lower is better) Translates to: PVESGSLTPVTA*DPSLSSVSWSI Trigger: TATTGACCAAGACACAGAAGATAAAGAGGGATCCCAAGCCGTGACTGGTGTCAAGCTCCCAGACTCCACCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118000.8 |
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| CDS CAA 72 bp | CCGCTCAGATCCCTCAGGCTTGACACCAGTCACGGCTaGGGATCCCTCTTTATCTTCTGTGTCTTGGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: PLRSLRLDTSHG*GSLFIFCVLVN Trigger: ATTGACCAAGACACAGAAGATAAAGAGGGATCCCAAGCCGTGACTGGTGTCAAGCCTGAGGGATCTGAGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147158.2 |
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| CDS CAA 90 bp | GTCTGTTCTGATTTCATGGGAGGCTCTTTGGGGTCTCTGGTCTTCTaGGTTTCTGACAGTGAGGCAAGAACAGGTGCAGCAGCAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: VCSDFMGGSLGSLVF*VSDSEARTGAAAAP Trigger: TGGTGCTGCTGCTGCACCTGTTCTTGCCTCACTGTCAGAAACCAAGAAGACCAGAGACCCCAAAGAGCCTCCCATGAAATCAGAACAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000119256.8 ENSMUST00000147158.2 |
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| CDS TCA 72 bp | GCGTGGGGCTTTCTTCACATGCTGGAATGTCTGTTCTaGTTTCATGGGAGGCTCTTTGGGGTCTCTGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: AWGFLHMLECLF*FHGRLFGVSGL Trigger: AAGACCAGAGACCCCAAAGAGCCTCCCATGAAATCAGAACAGACATTCCAGCATGTGAAGAAAGCCCCACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000119256.8 ENSMUST00000147158.2 |
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| CDS TCA 72 bp | CTTGGTCAATACTGGGATTATAATCTTTCTCTGCTCTaGAGAGGGGCAGCAACTGTGCCTGTGCAGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: LGQYWDYNLSLL*RGAATVPVQPA Trigger: GGCAGGCTGCACAGGCACAGTTGCTGCCCCTCTTCAGAGCAGAGAAAGATTATAATCCCAGTATTGACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118000.8 ENSMUST00000147158.2 |
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| CDS CCA 72 bp | ATTTCATGGGAGGCTCTTTGGGGTCTCTGGTCTTCTTaGTTTCTGACAGTGAGGCAAGAACAGGTGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: ISWEALWGLWSS*FLTVRQEQVQQ Trigger: CTGCTGCACCTGTTCTTGCCTCACTGTCAGAAACCAAGAAGACCAGAGACCCCAAAGAGCCTCCCATGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000119256.8 ENSMUST00000147158.2 |
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| CDS CCA 72 bp | CGCTCAGATCCCTCAGGCTTGACACCAGTCACGGCTTaGGATCCCTCTTTATCTTCTGTGTCTTGGTCAATA | + |
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Preference number: 6 (lower is better) Translates to: RSDPSGLTPVTA*DPSLSSVSWSI Trigger: TATTGACCAAGACACAGAAGATAAAGAGGGATCCCAAGCCGTGACTGGTGTCAAGCCTGAGGGATCTGAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147158.2 |
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| CDS CAA 72 bp | GATTTCATGGGAGGCTCTTTGGGGTCTCTGGTCTTCTaGGTTTCTGACAGTGAGGCAAGAACAGGTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: DFMGGSLGSLVF*VSDSEARTGAA Trigger: TGCTGCACCTGTTCTTGCCTCACTGTCAGAAACCAAGAAGACCAGAGACCCCAAAGAGCCTCCCATGAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000119256.8 ENSMUST00000147158.2 |
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| CDS CCA 72 bp | GCTGGAATGTCTGTTCTGATTTCATGGGAGGCTCTTTaGGGTCTCTGGTCTTCTTGGTTTCTGACAGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: AGMSVLISWEAL*GLWSSWFLTVR Trigger: CCTCACTGTCAGAAACCAAGAAGACCAGAGACCCCAAAGAGCCTCCCATGAAATCAGAACAGACATTCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000119256.8 ENSMUST00000147158.2 |
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| CDS GCA 72 bp | TGTGTCTTGGTCAATACTGGGATTATAATCTTTCTCTaGTCTGAAGAGGGGCAGCAACTGTGCCTGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CVLVNTGIIIFL*SEEGQQLCLCS Trigger: GCTGCACAGGCACAGTTGCTGCCCCTCTTCAGAGCAGAGAAAGATTATAATCCCAGTATTGACCAAGACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118000.8 ENSMUST00000147158.2 |
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| CDS CCA 72 bp | TCTGTTCTGATTTCATGGGAGGCTCTTTGGGGTCTCTaGTCTTCTTGGTTTCTGACAGTGAGGCAAGAACAG | + |
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Preference number: 6 (lower is better) Translates to: SVLISWEALWGL*SSWFLTVRQEQ Trigger: CTGTTCTTGCCTCACTGTCAGAAACCAAGAAGACCAGAGACCCCAAAGAGCCTCCCATGAAATCAGAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000119256.8 ENSMUST00000147158.2 |
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| CDS CAA 72 bp | TGCTGGAATGTCTGTTCTGATTTCATGGGAGGCTCTTaGGGGTCTCTGGTCTTCTTGGTTTCTGACAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: CWNVCSDFMGGS*GSLVFLVSDSE Trigger: CTCACTGTCAGAAACCAAGAAGACCAGAGACCCCAAAGAGCCTCCCATGAAATCAGAACAGACATTCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000119256.8 ENSMUST00000147158.2 |
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| CDS CCA 72 bp | CTTTCTTCACATGCTGGAATGTCTGTTCTGATTTCATaGGAGGCTCTTTGGGGTCTCTGGTCTTCTTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: LSSHAGMSVLIS*EALWGLWSSWF Trigger: AAACCAAGAAGACCAGAGACCCCAAAGAGCCTCCCATGAAATCAGAACAGACATTCCAGCATGTGAAGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002533.15 ENSMUST00000118000.8 ENSMUST00000119256.8 ENSMUST00000147158.2 |
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| CDS CAA 72 bp | AGTCACGGCTTGGGATCCCTCTTTATCTTCTGTGTCTaGGTCAATACTGGGATTATAATCTTTCTCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SHGLGSLFIFCV*VNTGIIIFLCS Trigger: AGAGCAGAGAAAGATTATAATCCCAGTATTGACCAAGACACAGAAGATAAAGAGGGATCCCAAGCCGTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118000.8 ENSMUST00000147158.2 |
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