Pregenerated sensors for RGS19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002458Ensembl transcript IDs: ENSMUST00000002532.9, ENSMUST00000108769.8, ENSMUST00000108771.2, ENSMUST00000108772.8, ENSMUST00000108776.8, ENSMUST00000108778.8, ENSMUST00000108779.8, ENSMUST00000144476.2, ENSMUST00000165416.8
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGCATCATCAAATGTGTGTGGCGATGGCTCTTGCATCTTCCTATTaGTGCCTTCTCGCACACGGGAGTCCAGGCTTACCTGTGTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: VHHQMCVAMALASSY*CLLAHGSPGLPVWQ Trigger: CTGCCACACAGGTAAGCCTGGACTCCCGTGTGCGAGAAGGCATCAATAGGAAGATGCAAGAGCCATCGCCACACACATTTGATGATGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| 3UTR GCA 90 bp | TCGAGGGTACGAGTCCCGGTGCATGAGGGTGTAGATCTGCAGCTGTaGATCATCAAATGTGTGTGGCGATGGCTCTTGCATCTTCCTATT | + |
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Preference number: 1 (lower is better) Translates to: SRVRVPVHEGVDLQL*IIKCVWRWLLHLPI Trigger: AATAGGAAGATGCAAGAGCCATCGCCACACACATTTGATGATGCACAGCTGCAGATCTACACCCTCATGCACCGGGACTCGTACCCTCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| 3UTR CCA 90 bp | GAGGGTGTAGATCTGCAGCTGTGCATCATCAAATGTGTGTGGCGATaGCTCTTGCATCTTCCTATTGATGCCTTCTCGCACACGGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: EGVDLQLCIIKCVWR*LLHLPIDAFSHTGV Trigger: GACTCCCGTGTGCGAGAAGGCATCAATAGGAAGATGCAAGAGCCATCGCCACACACATTTGATGATGCACAGCTGCAGATCTACACCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| 3UTR CCA 90 bp | GTGCATGAGGGTGTAGATCTGCAGCTGTGCATCATCAAATGTGTGTaGCGATGGCTCTTGCATCTTCCTATTGATGCCTTCTCGCACACG | + |
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Preference number: 1 (lower is better) Translates to: VHEGVDLQLCIIKCV*RWLLHLPIDAFSHT Trigger: CGTGTGCGAGAAGGCATCAATAGGAAGATGCAAGAGCCATCGCCACACACATTTGATGATGCACAGCTGCAGATCTACACCCTCATGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| 3UTR CCA 90 bp | TATAAATGGGCTCTTTATATGAGTCTGACTCTGAGGTCCTACATCTaGTTCTCAGGGAGTAACAGTTCTCCTGCTATAAACCTGTGGGCC | + |
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Preference number: 1 (lower is better) Translates to: YKWALYMSLTLRSYI*FSGSNSSPAINLWA Trigger: GGCCCACAGGTTTATAGCAGGAGAACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATAAAGAGCCCATTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| 3UTR-3UTR TCA 90 bp | GGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTATTTCCAGCCAAGACGAGTCCCGGTGCATaGGGGTGTAGATCTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GQLRTLQLPLGLSLFPAKTSPGA*GCRSAA Trigger: AGCTGCAGATCTACACCCTCATGCACCGGGACTCGT...CTTGGCTGGAAATAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGACCAGGCTTACCTGTGTaGCAGGCACCAAGGTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: TVGVVGDPFLQPPTPVVGPGLPV*QAPRSG Trigger: CCCTGACCTTGGTGCCTGCCACACAGGTAAGCCTGG...TCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGTGTAGATCTGCAGCTGTGCATCATCAAATGTGTGTGGCGATGGCTCTTGTATTTCCAGCCAAGTTaGACAGGGCCAGCCCCTAGG | + |
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Preference number: 2 (lower is better) Translates to: EGVDLQLCIIKCVWRWLLYFQPS*TGPAPR Trigger: CCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATA...CAAGAGCCATCGCCACACACATTTGATGATGCACAGCTGCAGATCTACACCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| 3UTR CAA 90 bp | TGTGCATCATCAAATGTGTGTGGCGATGGCTCTTGCATCTTCCTATaGATGCCTTCTCGCACACGGGAGTCCAGGCTTACCTGTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: CASSNVCGDGSCIFL*MPSRTRESRLTCVA Trigger: TGCCACACAGGTAAGCCTGGACTCCCGTGTGCGAGAAGGCATCAATAGGAAGATGCAAGAGCCATCGCCACACACATTTGATGATGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| 3UTR CAA 90 bp | GTAGATCTGCAGCTGTGCATCATCAAATGTGTGTGGCGATGGCTCTaGCATCTTCCTATTGATGCCTTCTCGCACACGGGAGTCCAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: VDLQLCIIKCVWRWL*HLPIDAFSHTGVQA Trigger: AGCCTGGACTCCCGTGTGCGAGAAGGCATCAATAGGAAGATGCAAGAGCCATCGCCACACACATTTGATGATGCACAGCTGCAGATCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTATAAACCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTTCCTGGTATTTCCAGCCAAGTTaGACAGGGCCAGCCCCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: CYKPVGLKGVVLHENISWYFQPS*TGPAPR Trigger: CCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATA...CCAGGAAATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGGTTTATAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| 3UTR-3UTR CCA 90 bp | TATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCAGGGAGTAACAGTTCTTATTTCCAGCCAAGTTaGACAGGGCCAGCCCCTAGG | + |
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Preference number: 2 (lower is better) Translates to: YMSLTLRSYIWFSGSNSSYFQPS*TGPAPR Trigger: CCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATA...AGAACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCTGCTATAAACCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTGGGTGTTGTTCTCCATaGGAACATTTCCTGGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: FSCYKPVGLKGVVLHENIGCCSP*EHFLGS Trigger: ACTGCCCAGGAAATGTTCTCATGGAGAACAACACCC...AATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGGTTTATAGCAGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| 3UTR-3UTR CCA 90 bp | TATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCAGGGAGTAACAGTTCTCTCCTACCCCAGTTGTaGGATAAACAGAGGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: YMSLTLRSYIWFSGSNSSLLPQL*DKQRLL Trigger: CAGAAGCCTCTGTTTATCCCACAACTGGGGTAGGAG...AGAACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCTGCTATAAACCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTCTGAGGTCCTACATCTaGTTCTCAGGGAGTAACAGT | + |
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Preference number: 2 (lower is better) Translates to: FSCYKPVGLKGVVLHENILRSYI*FSGSNS Trigger: ACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAG...AATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGGTTTATAGCAGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGAACAATTTCATGTCTTTaGAATGTAGAGGAGTACACA | + |
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Preference number: 2 (lower is better) Translates to: TVGVVGDPFLQPPTPVVGTISCL*NVEEYT Trigger: TGTGTACTCCTCTACATTCCAAAGACATGAAATTGT...TCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| 3UTR TCA 72 bp | AGGCTGCCCATGGGAGTAGAAGATCTGTGTGACAAATaGCCTAGGCCTCAGAGGACTGTGGGGCCCCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: RLPMGVEDLCDK*PRPQRTVGPPG Trigger: TCCAGGGGGCCCCACAGTCCTCTGAGGCCTAGGTCATTTGTCACACAGATCTTCTACTCCCATGGGCAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| 3UTR GCA 72 bp | CGAGTCCCGGTGCATGAGGGTGTAGATCTGCAGCTGTaGATCATCAAATGTGTGTGGCGATGGCTCTTGCAT | + |
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Preference number: 3 (lower is better) Translates to: RVPVHEGVDLQL*IIKCVWRWLLH Trigger: ATGCAAGAGCCATCGCCACACACATTTGATGATGCACAGCTGCAGATCTACACCCTCATGCACCGGGACTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| 3UTR TCA 72 bp | CACACTGTAGAGTCTGCACACTGTAGGTGTGGTAGGTaGTCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: HTVESAHCRCGR*SFSSASYPSCG Trigger: CCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGTGTGCAGACTCTACAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| 3UTR TCA 72 bp | ACTGTAGAGTTGAGGCTGGTTCCTAGAGTCATACCTTaGGCAGGGCCTGCAGTAGTACCTGTGGCACACTGT | + |
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Preference number: 3 (lower is better) Translates to: TVELRLVPRVIP*AGPAVVPVAHC Trigger: ACAGTGTGCCACAGGTACTACTGCAGGCCCTGCTCAAGGTATGACTCTAGGAACCAGCCTCAACTCTACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000144476.2 ENSMUST00000165416.8 |
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| 3UTR TCA 72 bp | CAAATGTGTGTGGCGATGGCTCTTGCATCTTCCTATTaGTGCCTTCTCGCACACGGGAGTCCAGGCTTACCT | + |
|
Preference number: 3 (lower is better) Translates to: QMCVAMALASSY*CLLAHGSPGLP Trigger: AGGTAAGCCTGGACTCCCGTGTGCGAGAAGGCATCAATAGGAAGATGCAAGAGCCATCGCCACACACATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| 3UTR GCA 72 bp | AGCTGTGCATCATCAAATGTGTGTGGCGATGGCTCTTaGATCTTCCTATTGATGCCTTCTCGCACACGGGAG | + |
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Preference number: 3 (lower is better) Translates to: SCASSNVCGDGS*IFLLMPSRTRE Trigger: CTCCCGTGTGCGAGAAGGCATCAATAGGAAGATGCAAGAGCCATCGCCACACACATTTGATGATGCACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| 3UTR CCA 72 bp | GGTGTAGATCTGCAGCTGTGCATCATCAAATGTGTGTaGCGATGGCTCTTGCATCTTCCTATTGATGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: GVDLQLCIIKCV*RWLLHLPIDAF Trigger: GAAGGCATCAATAGGAAGATGCAAGAGCCATCGCCACACACATTTGATGATGCACAGCTGCAGATCTACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| 3UTR-3UTR CAA 90 bp | GTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGATAAACAGAGGCTTCTGTACAATTTCATGTCTTaGGAATGTAGAGGAGTACAC | + |
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Preference number: 3 (lower is better) Translates to: VILFFSLLPQLWDKQRLLYNFMS*ECRGVH Trigger: GTGTACTCCTCTACATTCCAAAGACATGAAATTGTA...CAGAAGCCTCTGTTTATCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| 3UTR CCA 72 bp | GCTCTTTATATGAGTCTGACTCTGAGGTCCTACATCTaGTTCTCAGGGAGTAACAGTTCTCCTGCTATAAAC | + |
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Preference number: 3 (lower is better) Translates to: ALYMSLTLRSYI*FSGSNSSPAIN Trigger: GTTTATAGCAGGAGAACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATAAAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| 3UTR TCA 72 bp | AACAACAGCTTTGCTCCCATAATCTTTACTTGCATCTaGAGCCTTTGTTGGATGCTGACACACTGTAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: NNSFAPIIFTCI*SLCWMLTHCRV Trigger: AACTCTACAGTGTGTCAGCATCCAACAAAGGCTTCAGATGCAAGTAAAGATTATGGGAGCAAAGCTGTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108779.8 ENSMUST00000144476.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCAGCAGGGATTGCGACTaGGAGGTCCTGAGGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TGTESISSQVGQGQPLGCSRDCD*EVLRGL Trigger: CAGCCCCCTCAGGACCTCCCAGTCGCAATCCCTGCT...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR TCA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCACGAGTCCCGGTGCATaGGGGTGTAGATCTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: TGTESISSQVGQGQPLGCTSPGA*GCRSAA Trigger: AGCTGCAGATCTACACCCTCATGCACCGGGACTCGT...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR GCA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCCAGCTGGGGAGGGGTTaGAGCTTGCTTTCCCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: TGTESISSQVGQGQPLGCQLGRG*SLLSRE Trigger: TTCTCGGGAAAGCAAGCTGCAACCCCTCCCCAGCTG...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CCA 90 bp | GTGTGTGGCGATGGCTCTTGCATCTTCCTATTGATGCCTTCTCGCACACGGGAGAGCAGGGATTGCGACTaGGAGGTCCTGAGGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VCGDGSCIFLLMPSRTRESRDCD*EVLRGL Trigger: CAGCCCCCTCAGGACCTCCCAGTCGCAATCCCTGCT...CTCCCGTGTGCGAGAAGGCATCAATAGGAAGATGCAAGAGCCATCGCCACACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| CDS-3UTR CCA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCCCAGGCTTACCTCCTTaGGGGACAGGATGGACACGT | + |
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Preference number: 4 (lower is better) Translates to: TGTESISSQVGQGQPLGCPGLPP*GTGWTR Trigger: ACGTGTCCATCCTGTCCCCCAAGGAGGTAAGCCTGG...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR GCA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCATAAGCAGCAGGGATTaGGACTGGGAGGTCCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: TGTESISSQVGQGQPLGCISSRD*DWEVLR Trigger: CCTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTAT...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CCA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCGCTCGTTGCCGTTCTTaGTTCCAGGAGCAGCTACAG | + |
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Preference number: 4 (lower is better) Translates to: TGTESISSQVGQGQPLGCARCRS*FQEQLQ Trigger: CTGTAGCTGCTCCTGGAACCAAGAACGGCAACGAGC...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR TCA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCCTTGCATCTTCCTATTaGTGCCTTCTCGCACACGGG | + |
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Preference number: 4 (lower is better) Translates to: TGTESISSQVGQGQPLGCLASSY*CLLAHG Trigger: CCCGTGTGCGAGAAGGCATCAATAGGAAGATGCAAG...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR GCA 90 bp | AGGAGCAGGGTAGGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTAGCCCAGATTCTGTGGTaGCAGCTCTGGACCCTCACT | + |
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Preference number: 4 (lower is better) Translates to: RSRVGQLRTLQLPLGLSLAQILW*QLWTLT Trigger: AGTGAGGGTCCAGAGCTGGCACCACAGAATCTGGGC...TAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCCTACCCTGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108778.8 |
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| CDS-3UTR CCA 90 bp | ACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGAAGCAGGGATTGCGACTaGGAGGTCCTGAGGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TVGVVGDPFLQPPTPVVGSRDCD*EVLRGL Trigger: CAGCCCCCTCAGGACCTCCCAGTCGCAATCCCTGCT...TCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS-3UTR CCA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCCCTTGGGGGACAGGATaGACACGTAGTCCTCATAGA | + |
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Preference number: 4 (lower is better) Translates to: TGTESISSQVGQGQPLGCPWGTG*TRSPHR Trigger: TCTATGAGGACTACGTGTCCATCCTGTCCCCCAAGG...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CCA 90 bp | AGGAGCAGGGTAGGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTAGTTGCCCAGATTCTGTaGTGCCAGCTCTGGACCCTC | + |
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Preference number: 4 (lower is better) Translates to: RSRVGQLRTLQLPLGLSLVAQIL*CQLWTL Trigger: GAGGGTCCAGAGCTGGCACCACAGAATCTGGGCAAC...TAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCCTACCCTGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108778.8 |
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| CDS-3UTR TCA 90 bp | GTAGGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTATTTCCAGCCACGAGTCCCGGTGCATaGGGGTGTAGATCTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: VGQLRTLQLPLGLSLFPATSPGA*GCRSAA Trigger: AGCTGCAGATCTACACCCTCATGCACCGGGACTCGT...GGCTGGAAATAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR GCA 90 bp | GTAGGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTATTTCCAGCCCAGCTGGGGAGGGGTTaGAGCTTGCTTTCCCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: VGQLRTLQLPLGLSLFPAQLGRG*SLLSRE Trigger: TTCTCGGGAAAGCAAGCTGCAACCCCTCCCCAGCTG...GGCTGGAAATAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CCA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCCCACCACATGTTGGTTaGCCTCTGCTTTCAACTCCT | + |
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Preference number: 4 (lower is better) Translates to: TGTESISSQVGQGQPLGCPPHVG*PLLSTP Trigger: AGGAGTTGAAAGCAGAGGCCAACCAACATGTGGTGG...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR GCA 90 bp | AGGAGCAGGGTAGGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTATCCTCTGGCCCTGTGTaGTGTTTCTCAGCCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RSRVGQLRTLQLPLGLSLSSGPV*CFSASC Trigger: ACATGAGGCTGAGAAACAGCACACAGGGCCAGAGGA...TAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCCTACCCTGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | GGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTATTTCCAGCCAAGATAAGCAGCAGGGATTaGGACTGGGAGGTCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQLRTLQLPLGLSLFPAKISSRD*DWEVLR Trigger: CCTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTAT...CTTGGCTGGAAATAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGACAGCTGGGGAGGGGTTaGAGCTTGCTTTCCCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVGVVGDPFLQPPTPVVGQLGRG*SLLSRE Trigger: TTCTCGGGAAAGCAAGCTGCAACCCCTCCCCAGCTG...TCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTTCCTGGGCAGTAGGACAGCTGGGGAGGGGTTaGAGCTTGCTTTCCCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PVGLKGVVLHENISWAVGQLGRG*SLLSRE Trigger: TTCTCGGGAAAGCAAGCTGCAACCCCTCCCCAGCTG...TCCTACTGCCCAGGAAATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCCTTGTCAAAGGACTGTaGCCAGCTCTGTACTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGTESISSQVGQGQPLGCLVKGL*PALYFL Trigger: AAGGAAGTACAGAGCTGGGCACAGTCCTTTGACAAG...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCATGTTGGTTGGCCTCTaGTTTCAACTCCTCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGTESISSQVGQGQPLGCMLVGL*FQLLTS Trigger: GCTTGTGAGGAGTTGAAAGCAGAGGCCAACCAACAT...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCTGTGGCGATGGCTCTTaGATCTTCCTATTGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGTESISSQVGQGQPLGCCGDGS*IFLLMP Trigger: AGGCATCAATAGGAAGATGCAAGAGCCATCGCCACA...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGACCTGTCTGCCTCCTCTaGCCCTGTGTGCTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVGVVGDPFLQPPTPVVGPVCLL*PCVLFL Trigger: GAGAAACAGCACACAGGGCCAGAGGAGGCAGACAGG...TCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCTACTTCCTTAGGGCTTaGTGGAGTGCAGACTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TGTESISSQVGQGQPLGCYFLRA*WSADFT Trigger: TGTGAAGTCTGCACTCCACCAAGCCCTAAGGAAGTA...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGCAGGGTAGGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTACCTTGGGGGACAGGATaGACACGTAGTCCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSRVGQLRTLQLPLGLSLPWGTG*TRSPHR Trigger: TCTATGAGGACTACGTGTCCATCCTGTCCCCCAAGG...TAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCCTACCCTGCTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTAGATCTGCAGCTGTGCATCATCAAATGTGTGTGGCGATGGCTCTTGCATTCTGGCCCACCTCCTTaGGGGACAGGATGGACACGT | + |
|
Preference number: 4 (lower is better) Translates to: GVDLQLCIIKCVWRWLLHSGPPP*GTGWTR Trigger: ACGTGTCCATCCTGTCCCCCAAGGAGGTGGGCCAGA...ATGCAAGAGCCATCGCCACACACATTTGATGATGCACAGCTGCAGATCTACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
||
| CDS-3UTR TCA 90 bp | GGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTATTTCCAGCCAAGCTTGCATCTTCCTATTaGTGCCTTCTCGCACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQLRTLQLPLGLSLFPAKLASSY*CLLAHG Trigger: CCCGTGTGCGAGAAGGCATCAATAGGAAGATGCAAG...CTTGGCTGGAAATAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTGCACACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCAATAAGCAGCAGGGATTaGGACTGGGAGGTCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLHTVGVVGDPFLQPPTPISSRD*DWEVLR Trigger: CCTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTAT...TGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGTGTGCAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | GTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGATAAACAGAGGCTTCTGCAGCTGGGGAGGGGTTaGAGCTTGCTTTCCCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VILFFSLLPQLWDKQRLLQLGRG*SLLSRE Trigger: TTCTCGGGAAAGCAAGCTGCAACCCCTCCCCAGCTG...CAGAAGCCTCTGTTTATCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCGTAGATCTGCAGCTGTaGATCATCAAATGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGTESISSQVGQGQPLGCVDLQL*IIKCVW Trigger: CCACACACATTTGATGATGCACAGCTGCAGATCTAC...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTAGATCTGCAGCTGTGCATCATCAAATGTGTGTGGCGATGGCTCTTGCATCCTGTCTGCCTCCTCTaGCCCTGTGTGCTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVDLQLCIIKCVWRWLLHPVCLL*PCVLFL Trigger: GAGAAACAGCACACAGGGCCAGAGGAGGCAGACAGG...ATGCAAGAGCCATCGCCACACACATTTGATGATGCACAGCTGCAGATCTACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
||
| CDS-3UTR CCA 90 bp | TGCTATAAACCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTTCCTGGAGCAGGGATTGCGACTaGGAGGTCCTGAGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CYKPVGLKGVVLHENISWSRDCD*EVLRGL Trigger: CAGCCCCCTCAGGACCTCCCAGTCGCAATCCCTGCT...CCAGGAAATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGGTTTATAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTTCCTGGGCAGTAGGAGCTCGTTGCCGTTCTTaGTTCCAGGAGCAGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: PVGLKGVVLHENISWAVGARCRS*FQEQLQ Trigger: CTGTAGCTGCTCCTGGAACCAAGAACGGCAACGAGC...TCCTACTGCCCAGGAAATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTGCACACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCAGCTCGTTGCCGTTCTTaGTTCCAGGAGCAGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLHTVGVVGDPFLQPPTPARCRS*FQEQLQ Trigger: CTGTAGCTGCTCCTGGAACCAAGAACGGCAACGAGC...TGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGTGTGCAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGAGCTCGTTGCCGTTCTTaGTTCCAGGAGCAGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: TVGVVGDPFLQPPTPVVGARCRS*FQEQLQ Trigger: CTGTAGCTGCTCCTGGAACCAAGAACGGCAACGAGC...TCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTATTTCCAGCCCCTTGGGGGACAGGATaGACACGTAGTCCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGQLRTLQLPLGLSLFPAPWGTG*TRSPHR Trigger: TCTATGAGGACTACGTGTCCATCCTGTCCCCCAAGG...GGCTGGAAATAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| 3UTR CAA 72 bp | AGTAGGAGCAGGGTAGGACAGCTTAGAACCCTGCAGTaGCCACTGGGACTGAGTCTATTTCCAGCCAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRSRVGQLRTLQ*PLGLSLFPAKL Trigger: CAACTTGGCTGGAAATAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCCTACCCTGCTCCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| 3UTR CAA 72 bp | TCAAATGTGTGTGGCGATGGCTCTTGCATCTTCCTATaGATGCCTTCTCGCACACGGGAGTCCAGGCTTACC | + |
|
Preference number: 4 (lower is better) Translates to: SNVCGDGSCIFL*MPSRTRESRLT Trigger: GGTAAGCCTGGACTCCCGTGTGCGAGAAGGCATCAATAGGAAGATGCAAGAGCCATCGCCACACACATTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTGCACACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCACTTGCATCTTCCTATTaGTGCCTTCTCGCACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLHTVGVVGDPFLQPPTPLASSY*CLLAHG Trigger: CCCGTGTGCGAGAAGGCATCAATAGGAAGATGCAAG...TGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGTGTGCAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGCAGGGTAGGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTACTTGTCAAAGGACTGTaGCCAGCTCTGTACTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSRVGQLRTLQLPLGLSLLVKGL*PALYFL Trigger: AAGGAAGTACAGAGCTGGGCACAGTCCTTTGACAAG...TAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCCTACCCTGCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGCAGGGTAGGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTATGTGGCGATGGCTCTTaGATCTTCCTATTGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSRVGQLRTLQLPLGLSLCGDGS*IFLLMP Trigger: AGGCATCAATAGGAAGATGCAAGAGCCATCGCCACA...TAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCCTACCCTGCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | TATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCAGGGAGTAACAGTTCTAGCAGGGATTGCGACTaGGAGGTCCTGAGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YMSLTLRSYIWFSGSNSSSRDCD*EVLRGL Trigger: CAGCCCCCTCAGGACCTCCCAGTCGCAATCCCTGCT...AGAACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTGCTATAAACCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTAGCAGGGATTGCGACTaGGAGGTCCTGAGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSCYKPVGLKGVVLHENISRDCD*EVLRGL Trigger: CAGCCCCCTCAGGACCTCCCAGTCGCAATCCCTGCT...AATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGGTTTATAGCAGGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | GTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGATAAACAGAGGCTTCTGGCTCGTTGCCGTTCTTaGTTCCAGGAGCAGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: VILFFSLLPQLWDKQRLLARCRS*FQEQLQ Trigger: CTGTAGCTGCTCCTGGAACCAAGAACGGCAACGAGC...CAGAAGCCTCTGTTTATCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | GTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGATAAACAGAGGCTTCTGTCCTCTGGCCCTGTGTaGTGTTTCTCAGCCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VILFFSLLPQLWDKQRLLSSGPV*CFSASC Trigger: ACATGAGGCTGAGAAACAGCACACAGGGCCAGAGGA...CAGAAGCCTCTGTTTATCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTGCACACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCACCACCACATGTTGGTTaGCCTCTGCTTTCAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLHTVGVVGDPFLQPPTPPPHVG*PLLSTP Trigger: AGGAGTTGAAAGCAGAGGCCAACCAACATGTGGTGG...TGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGTGTGCAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| 3UTR CAA 72 bp | CAGCTGTGCATCATCAAATGTGTGTGGCGATGGCTCTaGCATCTTCCTATTGATGCCTTCTCGCACACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QLCIIKCVWRWL*HLPIDAFSHTG Trigger: TCCCGTGTGCGAGAAGGCATCAATAGGAAGATGCAAGAGCCATCGCCACACACATTTGATGATGCACAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGACTTGTCAAAGGACTGTaGCCAGCTCTGTACTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVGVVGDPFLQPPTPVVGLVKGL*PALYFL Trigger: AAGGAAGTACAGAGCTGGGCACAGTCCTTTGACAAG...TCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTATTTCCAGCCGTAGATCTGCAGCTGTaGATCATCAAATGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGQLRTLQLPLGLSLFPAVDLQL*IIKCVW Trigger: CCACACACATTTGATGATGCACAGCTGCAGATCTAC...GGCTGGAAATAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | TATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCAGGGAGTAACAGTTCTCCTGTCTGCCTCCTCTaGCCCTGTGTGCTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YMSLTLRSYIWFSGSNSSPVCLL*PCVLFL Trigger: GAGAAACAGCACACAGGGCCAGAGGAGGCAGACAGG...AGAACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTTCCTGGGCAGTAGGATACTTCCTTAGGGCTTaGTGGAGTGCAGACTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PVGLKGVVLHENISWAVGYFLRA*WSADFT Trigger: TGTGAAGTCTGCACTCCACCAAGCCCTAAGGAAGTA...TCCTACTGCCCAGGAAATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGATACTTCCTTAGGGCTTaGTGGAGTGCAGACTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TVGVVGDPFLQPPTPVVGYFLRA*WSADFT Trigger: TGTGAAGTCTGCACTCCACCAAGCCCTAAGGAAGTA...TCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | GTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGATAAACAGAGGCTTCTGCCACCACATGTTGGTTaGCCTCTGCTTTCAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VILFFSLLPQLWDKQRLLPPHVG*PLLSTP Trigger: AGGAGTTGAAAGCAGAGGCCAACCAACATGTGGTGG...CAGAAGCCTCTGTTTATCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | TATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCAGGGAGTAACAGTTCTCCAGGCTTACCTCCTTaGGGGACAGGATGGACACGT | + |
|
Preference number: 4 (lower is better) Translates to: YMSLTLRSYIWFSGSNSSPGLPP*GTGWTR Trigger: ACGTGTCCATCCTGTCCCCCAAGGAGGTAAGCCTGG...AGAACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | CTTTATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCAGGGAGTAACAGTCCAGGCTTACCTCCTTaGGGGACAGGATGGACACGT | + |
|
Preference number: 4 (lower is better) Translates to: LYMSLTLRSYIWFSGSNSPGLPP*GTGWTR Trigger: ACGTGTCCATCCTGTCCCCCAAGGAGGTAAGCCTGG...ACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTGCTATAAACCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTATAAGCAGCAGGGATTaGGACTGGGAGGTCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSCYKPVGLKGVVLHENIISSRD*DWEVLR Trigger: CCTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTAT...AATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGGTTTATAGCAGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | CTTTATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCAGGGAGTAACAGTATAAGCAGCAGGGATTaGGACTGGGAGGTCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYMSLTLRSYIWFSGSNSISSRD*DWEVLR Trigger: CCTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTAT...ACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | GTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGATAAACAGAGGCTTCTGCTTGTCAAAGGACTGTaGCCAGCTCTGTACTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VILFFSLLPQLWDKQRLLLVKGL*PALYFL Trigger: AAGGAAGTACAGAGCTGGGCACAGTCCTTTGACAAG...CAGAAGCCTCTGTTTATCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | GTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGATAAACAGAGGCTTCTGATGTTGGTTGGCCTCTaGTTTCAACTCCTCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VILFFSLLPQLWDKQRLLMLVGL*FQLLTS Trigger: GCTTGTGAGGAGTTGAAAGCAGAGGCCAACCAACAT...CAGAAGCCTCTGTTTATCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTGCACACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCAGTAGATCTGCAGCTGTaGATCATCAAATGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLHTVGVVGDPFLQPPTPVDLQL*IIKCVW Trigger: CCACACACATTTGATGATGCACAGCTGCAGATCTAC...TGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGTGTGCAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | CTTTATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCAGGGAGTAACAGTGCTCGTTGCCGTTCTTaGTTCCAGGAGCAGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LYMSLTLRSYIWFSGSNSARCRS*FQEQLQ Trigger: CTGTAGCTGCTCCTGGAACCAAGAACGGCAACGAGC...ACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | GTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGATAAACAGAGGCTTCTGTACTTCCTTAGGGCTTaGTGGAGTGCAGACTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VILFFSLLPQLWDKQRLLYFLRA*WSADFT Trigger: TGTGAAGTCTGCACTCCACCAAGCCCTAAGGAAGTA...CAGAAGCCTCTGTTTATCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTGCTATAAACCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTTCCTCTGGCCCTGTGTaGTGTTTCTCAGCCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: FSCYKPVGLKGVVLHENISSGPV*CFSASC Trigger: ACATGAGGCTGAGAAACAGCACACAGGGCCAGAGGA...AATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGGTTTATAGCAGGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | TATAAATGGGCTCTTTATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCACCTGTCTGCCTCCTCTaGCCCTGTGTGCTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YKWALYMSLTLRSYIWFSPVCLL*PCVLFL Trigger: GAGAAACAGCACACAGGGCCAGAGGAGGCAGACAGG...TGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATAAAGAGCCCATTTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | TATAAATGGGCTCTTTATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCACCAGGCTTACCTCCTTaGGGGACAGGATGGACACGT | + |
|
Preference number: 4 (lower is better) Translates to: YKWALYMSLTLRSYIWFSPGLPP*GTGWTR Trigger: ACGTGTCCATCCTGTCCCCCAAGGAGGTAAGCCTGG...TGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATAAAGAGCCCATTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | TGCTATAAACCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTTCCTGGTGTGGCGATGGCTCTTaGATCTTCCTATTGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CYKPVGLKGVVLHENISWCGDGS*IFLLMP Trigger: AGGCATCAATAGGAAGATGCAAGAGCCATCGCCACA...CCAGGAAATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGGTTTATAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | TGCTATAAACCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTTCCTGGTACTTCCTTAGGGCTTaGTGGAGTGCAGACTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: CYKPVGLKGVVLHENISWYFLRA*WSADFT Trigger: TGTGAAGTCTGCACTCCACCAAGCCCTAAGGAAGTA...CCAGGAAATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGGTTTATAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | TATAAATGGGCTCTTTATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCATCCTCTGGCCCTGTGTaGTGTTTCTCAGCCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: YKWALYMSLTLRSYIWFSSSGPV*CFSASC Trigger: ACATGAGGCTGAGAAACAGCACACAGGGCCAGAGGA...TGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATAAAGAGCCCATTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | TATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCAGGGAGTAACAGTTCTCTTGTCAAAGGACTGTaGCCAGCTCTGTACTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YMSLTLRSYIWFSGSNSSLVKGL*PALYFL Trigger: AAGGAAGTACAGAGCTGGGCACAGTCCTTTGACAAG...AGAACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | TATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCAGGGAGTAACAGTTCTATGTTGGTTGGCCTCTaGTTTCAACTCCTCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YMSLTLRSYIWFSGSNSSMLVGL*FQLLTS Trigger: GCTTGTGAGGAGTTGAAAGCAGAGGCCAACCAACAT...AGAACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | TATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCAGGGAGTAACAGTTCTTGTGGCGATGGCTCTTaGATCTTCCTATTGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YMSLTLRSYIWFSGSNSSCGDGS*IFLLMP Trigger: AGGCATCAATAGGAAGATGCAAGAGCCATCGCCACA...AGAACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTGGAAAGACCATAACAACAGCTTTGCTCCCATAATCTTTACTTGCATCCCTGTCTGCCTCCTCTaGCCCTGTGTGCTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLWKDHNNSFAPIIFTCIPVCLL*PCVLFL Trigger: GAGAAACAGCACACAGGGCCAGAGGAGGCAGACAGG...GATGCAAGTAAAGATTATGGGAGCAAAGCTGTTGTTATGGTCTTTCCAAAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002532.9 ENSMUST00000108779.8 |
||
| CDS-3UTR CCA 90 bp | TATAAATGGGCTCTTTATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCACCTTGGGGGACAGGATaGACACGTAGTCCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: YKWALYMSLTLRSYIWFSPWGTG*TRSPHR Trigger: TCTATGAGGACTACGTGTCCATCCTGTCCCCCAAGG...TGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATAAAGAGCCCATTTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTTTGGAAAGACCATAACAACAGCTTTGCTCCCATAATCTTTACTTGCATCATAAGCAGCAGGGATTaGGACTGGGAGGTCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWKDHNNSFAPIIFTCIISSRD*DWEVLR Trigger: CCTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTAT...GATGCAAGTAAAGATTATGGGAGCAAAGCTGTTGTTATGGTCTTTCCAAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002532.9 ENSMUST00000108779.8 |
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| CDS-3UTR CCA 90 bp | TATAAATGGGCTCTTTATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCACCACCACATGTTGGTTaGCCTCTGCTTTCAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YKWALYMSLTLRSYIWFSPPHVG*PLLSTP Trigger: AGGAGTTGAAAGCAGAGGCCAACCAACATGTGGTGG...TGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATAAAGAGCCCATTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CCA 90 bp | TTTCTTTGGAAAGACCATAACAACAGCTTTGCTCCCATAATCTTTACTTGCATCACAGAGGCTTCTCCTTaGGGGACAGGATGGACACGT | + |
|
Preference number: 4 (lower is better) Translates to: FLWKDHNNSFAPIIFTCITEASP*GTGWTR Trigger: ACGTGTCCATCCTGTCCCCCAAGGAGAAGCCTCTGT...GATGCAAGTAAAGATTATGGGAGCAAAGCTGTTGTTATGGTCTTTCCAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144476.2 |
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| CDS-3UTR GCA 90 bp | TTTCTTTGGAAAGACCATAACAACAGCTTTGCTCCCATAATCTTTACTTGCATCTCCTCTGGCCCTGTGTaGTGTTTCTCAGCCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: FLWKDHNNSFAPIIFTCISSGPV*CFSASC Trigger: ACATGAGGCTGAGAAACAGCACACAGGGCCAGAGGA...GATGCAAGTAAAGATTATGGGAGCAAAGCTGTTGTTATGGTCTTTCCAAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002532.9 ENSMUST00000108779.8 |
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| CDS-3UTR CCA 90 bp | TTTCTTTGGAAAGACCATAACAACAGCTTTGCTCCCATAATCTTTACTTGCATCCCTTGGGGGACAGGATaGACACGTAGTCCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLWKDHNNSFAPIIFTCIPWGTG*TRSPHR Trigger: TCTATGAGGACTACGTGTCCATCCTGTCCCCCAAGG...GATGCAAGTAAAGATTATGGGAGCAAAGCTGTTGTTATGGTCTTTCCAAAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002532.9 ENSMUST00000144476.2 |
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| CDS-3UTR GCA 90 bp | TATAAATGGGCTCTTTATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCAGTAGATCTGCAGCTGTaGATCATCAAATGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YKWALYMSLTLRSYIWFSVDLQL*IIKCVW Trigger: CCACACACATTTGATGATGCACAGCTGCAGATCTAC...TGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATAAAGAGCCCATTTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CCA 90 bp | TTTCTTTGGAAAGACCATAACAACAGCTTTGCTCCCATAATCTTTACTTGCATCCCACCACATGTTGGTTaGCCTCTGCTTTCAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLWKDHNNSFAPIIFTCIPPHVG*PLLSTP Trigger: AGGAGTTGAAAGCAGAGGCCAACCAACATGTGGTGG...GATGCAAGTAAAGATTATGGGAGCAAAGCTGTTGTTATGGTCTTTCCAAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002532.9 ENSMUST00000144476.2 |
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| CDS-3UTR GCA 90 bp | TTTCTTTGGAAAGACCATAACAACAGCTTTGCTCCCATAATCTTTACTTGCATCATGTTGGTTGGCCTCTaGTTTCAACTCCTCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLWKDHNNSFAPIIFTCIMLVGL*FQLLTS Trigger: GCTTGTGAGGAGTTGAAAGCAGAGGCCAACCAACAT...GATGCAAGTAAAGATTATGGGAGCAAAGCTGTTGTTATGGTCTTTCCAAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002532.9 ENSMUST00000144476.2 |
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| CDS CCA 90 bp | AAGCAGCAGGGATTGCGACTGGGAGGTCCTGAGGGGGCTGCGTCATaGCTGGACATCGAGGGAGGCCTGTCTGCCTCCTCTGGCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KQQGLRLGGPEGAAS*LDIEGGLSASSGPV Trigger: CACAGGGCCAGAGGAGGCAGACAGGCCTCCCTCGATGTCCAGCCATGACGCAGCCCCCTCAGGACCTCCCAGTCGCAATCCCTGCTGCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS GCA 90 bp | TCCAGGAGCAGCTACAGCAGCAGCACCAGCATAAGCAGCAGGGATTaGGACTGGGAGGTCCTGAGGGGGCTGCGTCATGGCTGGACATCG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSYSSSTSISSRD*DWEVLRGLRHGWTS Trigger: CGATGTCCAGCCATGACGCAGCCCCCTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTATGCTGGTGCTGCTGCTGTAGCTGCTCCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS CCA 90 bp | AGCAGCTACAGCAGCAGCACCAGCATAAGCAGCAGGGATTGCGACTaGGAGGTCCTGAGGGGGCTGCGTCATGGCTGGACATCGAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSYSSSTSISSRDCD*EVLRGLRHGWTSRE Trigger: CTCCCTCGATGTCCAGCCATGACGCAGCCCCCTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTATGCTGGTGCTGCTGCTGTAGCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCGGGAGGGGTTGCAGCTaGCTTTCCCGAGAAACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TGTESISSQVGQGQPLGCGRGCS*LSRETC Trigger: GCAGGTTTCTCGGGAAAGCAAGCTGCAACCCCTCCC...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCACAGCTGGGGAGGGGTaGCAGCTTGCTTTCCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGTESISSQVGQGQPLGCTAGEG*QLAFPR Trigger: TCTCGGGAAAGCAAGCTGCAACCCCTCCCCAGCTGT...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCTCCAGGCTTACCTCCTaGGGGGACAGGATGGACACG | + |
|
Preference number: 5 (lower is better) Translates to: TGTESISSQVGQGQPLGCSRLTS*GDRMDT Trigger: CGTGTCCATCCTGTCCCCCAAGGAGGTAAGCCTGGA...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCCATAAGCAGCAGGGATaGCGACTGGGAGGTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TGTESISSQVGQGQPLGCHKQQG*RLGGPE Trigger: CTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTATG...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGGCGATGGCTCTTGCATCTTCCTATTGATGCCTTCTCGCACACGGGAGATCTGGCCCACCTCCTaGGGGGACAGGATGGACACG | + |
|
Preference number: 5 (lower is better) Translates to: VCGDGSCIFLLMPSRTREIWPTS*GDRMDT Trigger: CGTGTCCATCCTGTCCCCCAAGGAGGTGGGCCAGAT...CTCCCGTGTGCGAGAAGGCATCAATAGGAAGATGCAAGAGCCATCGCCACACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
||
| CDS GCA 90 bp | ACTTCACAGCTGGGGAGGGGTTGCAGCTTGCTTTCCCGAGAAACCTaGCAAGCTCGTTGCCGTTCTTGGTTCCAGGAGCAGCTACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSQLGRGCSLLSRET*QARCRSWFQEQLQQ Trigger: CTGCTGTAGCTGCTCCTGGAACCAAGAACGGCAACGAGCTTGGCAGGTTTCTCGGGAAAGCAAGCTGCAACCCCTCCCCAGCTGTGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
||
| CDS GCA 90 bp | TCCTTAGGGCTTGGTGGAGTGCAGACTTCACAGCTGGGGAGGGGTTaGAGCTTGCTTTCCCGAGAAACCTGCCAAGCTCGTTGCCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLGLGGVQTSQLGRG*SLLSRETCQARCRS Trigger: AGAACGGCAACGAGCTTGGCAGGTTTCTCGGGAAAGCAAGCTGCAACCCCTCCCCAGCTGTGAAGTCTGCACTCCACCAAGCCCTAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCAGCTCGTTGCCGTTCTaGGTTCCAGGAGCAGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: TGTESISSQVGQGQPLGCSSLPF*VPGAAT Trigger: TGTAGCTGCTCCTGGAACCAAGAACGGCAACGAGCT...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGCAGGGTAGGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTAACAGCTGGGGAGGGGTaGCAGCTTGCTTTCCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSRVGQLRTLQLPLGLSLTAGEG*QLAFPR Trigger: TCTCGGGAAAGCAAGCTGCAACCCCTCCCCAGCTGT...TAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCCTACCCTGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS CCA 90 bp | TGCAGCTTGCTTTCCCGAGAAACCTGCCAAGCTCGTTGCCGTTCTTaGTTCCAGGAGCAGCTACAGCAGCAGCACCAGCATAAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSLLSRETCQARCRS*FQEQLQQQHQHKQQ Trigger: CTGCTGCTTATGCTGGTGCTGCTGCTGTAGCTGCTCCTGGAACCAAGAACGGCAACGAGCTTGGCAGGTTTCTCGGGAAAGCAAGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
||
| CDS CCA 90 bp | CGCTGTATTCTGTGCGCAGGAATGCCCGGAATACACTGCGGCCCGTaGGGCTATGCATCAACTTGTCAAAGGACTGTGCCCAGCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RCILCAGMPGIHCGP*GYASTCQRTVPSSV Trigger: TACAGAGCTGGGCACAGTCCTTTGACAAGTTGATGCATAGCCCCACGGGCCGCAGTGTATTCCGGGCATTCCTGCGCACAGAATACAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | AGGAGCAGGGTAGGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTACATAAGCAGCAGGGATaGCGACTGGGAGGTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSRVGQLRTLQLPLGLSLHKQQG*RLGGPE Trigger: CTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTATG...TAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCCTACCCTGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | ACTGGGACTGAGTCTATTTCCAGCCAAGTTGGACAGGGCCAGCCCCTAGGCTGCCTCGTCCACCACATGTaGGTTGGCCTCTGCTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TGTESISSQVGQGQPLGCLVHHM*VGLCFQ Trigger: TTGAAAGCAGAGGCCAACCAACATGTGGTGGACGAG...GCAGCCTAGGGGCTGGCCCTGTCCAACTTGGCTGGAAATAGACTCAGTCCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108772.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS GCA 90 bp | TCTGTGCGCAGGAATGCCCGGAATACACTGCGGCCCGTGGGGCTATaGATCAACTTGTCAAAGGACTGTGCCCAGCTCTGTACTTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SVRRNARNTLRPVGL*INLSKDCAQLCTSL Trigger: TAAGGAAGTACAGAGCTGGGCACAGTCCTTTGACAAGTTGATGCATAGCCCCACGGGCCGCAGTGTATTCCGGGCATTCCTGCGCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS GCA 90 bp | TGTTCTCTTCGCTGTATTCTGTGCGCAGGAATGCCCGGAATACACTaGGGCCCGTGGGGCTATGCATCAACTTGTCAAAGGACTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CSLRCILCAGMPGIH*GPWGYASTCQRTVP Trigger: GGGCACAGTCCTTTGACAAGTTGATGCATAGCCCCACGGGCCGCAGTGTATTCCGGGCATTCCTGCGCACAGAATACAGCGAAGAGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | AGGAGCAGGGTAGGACAGCTTAGAACCCTGCAGTTGCCACTGGGACTGAGTCTAAGCTCGTTGCCGTTCTaGGTTCCAGGAGCAGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: RSRVGQLRTLQLPLGLSLSSLPF*VPGAAT Trigger: TGTAGCTGCTCCTGGAACCAAGAACGGCAACGAGCT...TAGACTCAGTCCCAGTGGCAACTGCAGGGTTCTAAGCTGTCCTACCCTGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | AGTCTGCACACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCAGGGAGGGGTTGCAGCTaGCTTTCCCGAGAAACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLHTVGVVGDPFLQPPTPGRGCS*LSRETC Trigger: GCAGGTTTCTCGGGAAAGCAAGCTGCAACCCCTCCC...TGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGTGTGCAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | AGTCTGCACACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCAACAGCTGGGGAGGGGTaGCAGCTTGCTTTCCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLHTVGVVGDPFLQPPTPTAGEG*QLAFPR Trigger: TCTCGGGAAAGCAAGCTGCAACCCCTCCCCAGCTGT...TGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGTGTGCAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | ACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGAACAGCTGGGGAGGGGTaGCAGCTTGCTTTCCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TVGVVGDPFLQPPTPVVGTAGEG*QLAFPR Trigger: TCTCGGGAAAGCAAGCTGCAACCCCTCCCCAGCTGT...TCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | AGTCTGCACACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCATCCAGGCTTACCTCCTaGGGGGACAGGATGGACACG | + |
|
Preference number: 5 (lower is better) Translates to: SLHTVGVVGDPFLQPPTPSRLTS*GDRMDT Trigger: CGTGTCCATCCTGTCCCCCAAGGAGGTAAGCCTGGA...TGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGTGTGCAGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS TCA 90 bp | GTGCATCATCAAATGTGTGTGGCGATGGCTCTTGCATCTTCCTATTaGTGCCTTCTCGCACACGGGAGTCCAGGCTTACCTCCTTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VHHQMCVAMALASSY*CLLAHGSPGLPPWG Trigger: CCCCCAAGGAGGTAAGCCTGGACTCCCGTGTGCGAGAAGGCATCAATAGGAAGATGCAAGAGCCATCGCCACACACATTTGATGATGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000002532.9 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | AGTCTGCACACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCACATAAGCAGCAGGGATaGCGACTGGGAGGTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLHTVGVVGDPFLQPPTPHKQQG*RLGGPE Trigger: CTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTATG...TGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGTGTGCAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | ACTGTAGGTGTGGTAGGTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGAAGCTCGTTGCCGTTCTaGGTTCCAGGAGCAGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: TVGVVGDPFLQPPTPVVGSSLPF*VPGAAT Trigger: TGTAGCTGCTCCTGGAACCAAGAACGGCAACGAGCT...TCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCACCTACCACACCTACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | GTGATCCTTTTCTTCAGCCTCCTACCCCAGTTGTGGGATAAACAGAGGCTTCTGAGCTCGTTGCCGTTCTaGGTTCCAGGAGCAGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: VILFFSLLPQLWDKQRLLSSLPF*VPGAAT Trigger: TGTAGCTGCTCCTGGAACCAAGAACGGCAACGAGCT...CAGAAGCCTCTGTTTATCCCACAACTGGGGTAGGAGGCTGAAGAAAAGGATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | TGCTATAAACCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTTCCTGGTCCAGGCTTACCTCCTaGGGGGACAGGATGGACACG | + |
|
Preference number: 5 (lower is better) Translates to: CYKPVGLKGVVLHENISWSRLTS*GDRMDT Trigger: CGTGTCCATCCTGTCCCCCAAGGAGGTAAGCCTGGA...CCAGGAAATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGGTTTATAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | TTCTCCTGCTATAAACCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTGGGAGGGGTTGCAGCTaGCTTTCCCGAGAAACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSCYKPVGLKGVVLHENIGRGCS*LSRETC Trigger: GCAGGTTTCTCGGGAAAGCAAGCTGCAACCCCTCCC...AATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGGTTTATAGCAGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | CTTTATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCAGGGAGTAACAGTACAGCTGGGGAGGGGTaGCAGCTTGCTTTCCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LYMSLTLRSYIWFSGSNSTAGEG*QLAFPR Trigger: TCTCGGGAAAGCAAGCTGCAACCCCTCCCCAGCTGT...ACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | CTTTATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCAGGGAGTAACAGTCATAAGCAGCAGGGATaGCGACTGGGAGGTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LYMSLTLRSYIWFSGSNSHKQQG*RLGGPE Trigger: CTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTATG...ACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | TATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCAGGGAGTAACAGTTCTCATAAGCAGCAGGGATaGCGACTGGGAGGTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: YMSLTLRSYIWFSGSNSSHKQQG*RLGGPE Trigger: CTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTATG...AGAACTGTTACTCCCTGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | GTAGATCTGCAGCTGTGCATCATCAAATGTGTGTGGCGATGGCTCTTGCATCTTCTCGTCCACCACATGTaGGTTGGCCTCTGCTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: VDLQLCIIKCVWRWLLHLLVHHM*VGLCFQ Trigger: TTGAAAGCAGAGGCCAACCAACATGTGGTGGACGAG...AAGATGCAAGAGCCATCGCCACACACATTTGATGATGCACAGCTGCAGATCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108769.8 |
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| CDS-3UTR CAA 90 bp | TTCTCCTGCTATAAACCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTAGCTCGTTGCCGTTCTaGGTTCCAGGAGCAGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: FSCYKPVGLKGVVLHENISSLPF*VPGAAT Trigger: TGTAGCTGCTCCTGGAACCAAGAACGGCAACGAGCT...AATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGGTTTATAGCAGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | TATAAATGGGCTCTTTATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCATCCAGGCTTACCTCCTaGGGGGACAGGATGGACACG | + |
|
Preference number: 5 (lower is better) Translates to: YKWALYMSLTLRSYIWFSSRLTS*GDRMDT Trigger: CGTGTCCATCCTGTCCCCCAAGGAGGTAAGCCTGGA...TGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATAAAGAGCCCATTTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002532.9 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | TTCTCCTGCTATAAACCTGTGGGCCTAAAGGGTGTTGTTCTCCATGAGAACATTCTCGTCCACCACATGTaGGTTGGCCTCTGCTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: FSCYKPVGLKGVVLHENILVHHM*VGLCFQ Trigger: TTGAAAGCAGAGGCCAACCAACATGTGGTGGACGAG...AATGTTCTCATGGAGAACAACACCCTTTAGGCCCACAGGTTTATAGCAGGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | TTTCTTTGGAAAGACCATAACAACAGCTTTGCTCCCATAATCTTTACTTGCATCGGGAGGGGTTGCAGCTaGCTTTCCCGAGAAACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLWKDHNNSFAPIIFTCIGRGCS*LSRETC Trigger: GCAGGTTTCTCGGGAAAGCAAGCTGCAACCCCTCCC...GATGCAAGTAAAGATTATGGGAGCAAAGCTGTTGTTATGGTCTTTCCAAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002532.9 ENSMUST00000108779.8 |
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| CDS-3UTR CAA 90 bp | TATAAATGGGCTCTTTATATGAGTCTGACTCTGAGGTCCTACATCTGGTTCTCACTCGTCCACCACATGTaGGTTGGCCTCTGCTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: YKWALYMSLTLRSYIWFSLVHHM*VGLCFQ Trigger: TTGAAAGCAGAGGCCAACCAACATGTGGTGGACGAG...TGAGAACCAGATGTAGGACCTCAGAGTCAGACTCATATAAAGAGCCCATTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS-3UTR CAA 90 bp | TTTCTTTGGAAAGACCATAACAACAGCTTTGCTCCCATAATCTTTACTTGCATCAACAGAGGCTTCTCCTaGGGGGACAGGATGGACACG | + |
|
Preference number: 5 (lower is better) Translates to: FLWKDHNNSFAPIIFTCINRGFS*GDRMDT Trigger: CGTGTCCATCCTGTCCCCCAAGGAGAAGCCTCTGTT...GATGCAAGTAAAGATTATGGGAGCAAAGCTGTTGTTATGGTCTTTCCAAAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144476.2 |
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| CDS-3UTR CAA 90 bp | TTTCTTTGGAAAGACCATAACAACAGCTTTGCTCCCATAATCTTTACTTGCATCCTCGTCCACCACATGTaGGTTGGCCTCTGCTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: FLWKDHNNSFAPIIFTCILVHHM*VGLCFQ Trigger: TTGAAAGCAGAGGCCAACCAACATGTGGTGGACGAG...GATGCAAGTAAAGATTATGGGAGCAAAGCTGTTGTTATGGTCTTTCCAAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002532.9 ENSMUST00000144476.2 |
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| CDS CCA 72 bp | GGATTGCGACTGGGAGGTCCTGAGGGGGCTGCGTCATaGCTGGACATCGAGGGAGGCCTGTCTGCCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GLRLGGPEGAAS*LDIEGGLSASS Trigger: AGAGGAGGCAGACAGGCCTCCCTCGATGTCCAGCCATGACGCAGCCCCCTCAGGACCTCCCAGTCGCAATCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS GCA 72 bp | AGCTACAGCAGCAGCACCAGCATAAGCAGCAGGGATTaGGACTGGGAGGTCCTGAGGGGGCTGCGTCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: SYSSSTSISSRD*DWEVLRGLRHG Trigger: GCCATGACGCAGCCCCCTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTATGCTGGTGCTGCTGCTGTAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS CCA 72 bp | AGCAGCAGCACCAGCATAAGCAGCAGGGATTGCGACTaGGAGGTCCTGAGGGGGCTGCGTCATGGCTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SSSTSISSRDCD*EVLRGLRHGWT Trigger: TGTCCAGCCATGACGCAGCCCCCTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTATGCTGGTGCTGCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS CAA 72 bp | CAGCTACAGCAGCAGCACCAGCATAAGCAGCAGGGATaGCGACTGGGAGGTCCTGAGGGGGCTGCGTCATGG | + |
|
Preference number: 6 (lower is better) Translates to: QLQQQHQHKQQG*RLGGPEGAASW Trigger: CCATGACGCAGCCCCCTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTATGCTGGTGCTGCTGCTGTAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS CAA 90 bp | TTCCAGGAGCAGCTACAGCAGCAGCACCAGCATAAGCAGCAGGGATaGCGACTGGGAGGTCCTGAGGGGGCTGCGTCATGGCTGGACATC | + |
|
Preference number: 6 (lower is better) Translates to: FQEQLQQQHQHKQQG*RLGGPEGAASWLDI Trigger: GATGTCCAGCCATGACGCAGCCCCCTCAGGACCTCCCAGTCGCAATCCCTGCTGCTTATGCTGGTGCTGCTGCTGTAGCTGCTCCTGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS CCA 72 bp | ATGGCTGGACATCGAGGGAGGCCTGTCTGCCTCCTCTaGCCCTGTGTGCTGTTTCTCAGCCTCATGTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: MAGHRGRPVCLL*PCVLFLSLMWG Trigger: ACCCCACATGAGGCTGAGAAACAGCACACAGGGCCAGAGGAGGCAGACAGGCCTCCCTCGATGTCCAGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS GCA 72 bp | CTGGGGAGGGGTTGCAGCTTGCTTTCCCGAGAAACCTaGCAAGCTCGTTGCCGTTCTTGGTTCCAGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGRGCSLLSRET*QARCRSWFQEQ Trigger: CTGCTCCTGGAACCAAGAACGGCAACGAGCTTGGCAGGTTTCTCGGGAAAGCAAGCTGCAACCCCTCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS CAA 72 bp | GCTTTCCCGAGAAACCTGCCAAGCTCGTTGCCGTTCTaGGTTCCAGGAGCAGCTACAGCAGCAGCACCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AFPRNLPSSLPF*VPGAATAAAPA Trigger: TGCTGGTGCTGCTGCTGTAGCTGCTCCTGGAACCAAGAACGGCAACGAGCTTGGCAGGTTTCTCGGGAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
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| CDS GCA 72 bp | AGGAATGCCCGGAATACACTGCGGCCCGTGGGGCTATaGATCAACTTGTCAAAGGACTGTGCCCAGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RNARNTLRPVGL*INLSKDCAQLC Trigger: ACAGAGCTGGGCACAGTCCTTTGACAAGTTGATGCATAGCCCCACGGGCCGCAGTGTATTCCGGGCATTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
||
| CDS CCA 72 bp | CTTTCCCGAGAAACCTGCCAAGCTCGTTGCCGTTCTTaGTTCCAGGAGCAGCTACAGCAGCAGCACCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LSRETCQARCRS*FQEQLQQQHQH Trigger: ATGCTGGTGCTGCTGCTGTAGCTGCTCCTGGAACCAAGAACGGCAACGAGCTTGGCAGGTTTCTCGGGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000108779.8 ENSMUST00000165416.8 |
||
| CDS CAA 90 bp | AGGAATGCCCGGAATACACTGCGGCCCGTGGGGCTATGCATCAACTaGTCAAAGGACTGTGCCCAGCTCTGTACTTCCTTAGGGCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RNARNTLRPVGLCIN*SKDCAQLCTSLGLG Trigger: ACCAAGCCCTAAGGAAGTACAGAGCTGGGCACAGTCCTTTGACAAGTTGATGCATAGCCCCACGGGCCGCAGTGTATTCCGGGCATTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS GCA 72 bp | GCCCGTGGGGCTATGCATCAACTTGTCAAAGGACTGTaGCCAGCTCTGTACTTCCTTAGGGCTTGGTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ARGAMHQLVKGL*PALYFLRAWWS Trigger: ACTCCACCAAGCCCTAAGGAAGTACAGAGCTGGGCACAGTCCTTTGACAAGTTGATGCATAGCCCCACGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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| CDS CAA 90 bp | CACGTAGTCCTCATAGATAAGTCGCGCCTTCTCGTCCACCACATGTaGGTTGGCCTCTGCTTTCAACTCCTCACAAGCCAGCCAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: HVVLIDKSRLLVHHM*VGLCFQLLTSQPEE Trigger: CTCTTCTGGCTGGCTTGTGAGGAGTTGAAAGCAGAGGCCAACCAACATGTGGTGGACGAGAAGGCGCGACTTATCTATGAGGACTACGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000002532.9 ENSMUST00000108769.8 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000144476.2 ENSMUST00000165416.8 |
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| CDS CAA 90 bp | TGTGCATCATCAAATGTGTGTGGCGATGGCTCTTGCATCTTCCTATaGATGCCTTCTCGCACACGGGAGTCCAGGCTTACCTCCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: CASSNVCGDGSCIFL*MPSRTRESRLTSLG Trigger: CCCCAAGGAGGTAAGCCTGGACTCCCGTGTGCGAGAAGGCATCAATAGGAAGATGCAAGAGCCATCGCCACACACATTTGATGATGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000002532.9 ENSMUST00000108771.2 ENSMUST00000108772.8 ENSMUST00000108776.8 ENSMUST00000108778.8 ENSMUST00000165416.8 |
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