Pregenerated sensors for RGS18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026357Ensembl transcript IDs: ENSMUST00000027603.4
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGGTTGGTGTTGTTTCAATGACTCGTTCATTTACTGGGAGAGATaGTCTACTCCATGGATATGTGGAGAAATGAAACATGACCACACT | + |
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Preference number: 1 (lower is better) Translates to: TGWCCFNDSFIYWER*STPWICGEMKHDHT Trigger: AGTGTGGTCATGTTTCATTTCTCCACATATCCATGGAGTAGATCATCTCTCCCAGTAAATGAACGAGTCATTGAAACAACACCAACCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| 3UTR-3UTR TCA 90 bp | TGCTTGTGTGAAAGTATGCCATCTTCATCGTTCAAGCACTGGTTGGTGTTGTTTTGGAGAAATGAAACATaGCCACACTCCTGTGAACAA | + |
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Preference number: 2 (lower is better) Translates to: CLCESMPSSSFKHWLVLFWRNET*PHSCEQ Trigger: TTGTTCACAGGAGTGTGGTCATGTTTCATTTCTCCA...AAACAACACCAACCAGTGCTTGAACGATGAAGATGGCATACTTTCACACAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| 3UTR-3UTR TCA 90 bp | TGCTTGTGTGAAAGTATGCCATCTTCATCGTTCAAGCACTGGTTGGTGTTGTTTATGACCACACTCCTGTaGACAAAATTGTTGCTCTAT | + |
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Preference number: 2 (lower is better) Translates to: CLCESMPSSSFKHWLVLFMTTLL*TKLLLY Trigger: ATAGAGCAACAATTTTGTTCACAGGAGTGTGGTCAT...AAACAACACCAACCAGTGCTTGAACGATGAAGATGGCATACTTTCACACAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| 3UTR-3UTR TCA 90 bp | GAATTGAAAGAACATAATGAGAGAAAAGGGTGTGCTGATGTCAAAGTTGTCAAAGGATATGTGGAGAAATaGAACATGACCACACTCCTG | + |
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Preference number: 2 (lower is better) Translates to: ELKEHNERKGCADVKVVKGYVEK*NMTTLL Trigger: CAGGAGTGTGGTCATGTTTCATTTCTCCACATATCC...TTTGACAACTTTGACATCAGCACACCCTTTTCTCTCATTATGTTCTTTCAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| 3UTR TCA 72 bp | GCTCTATCTAATGGGGAATGTTCATCAGAGTACATATaGTGGCAAAGTGAAGTCTCAGACATCTACCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: ALSNGECSSEYI*WQSEVSDIYLG Trigger: ACCCAGGTAGATGTCTGAGACTTCACTTTGCCATCATATGTACTCTGATGAACATTCCCCATTAGATAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| 3UTR TCA 72 bp | TCTTCATCGTTCAAGCACTGGTTGGTGTTGTTTCAATaGCTCGTTCATTTACTGGGAGAGATGATCTACTCC | + |
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Preference number: 3 (lower is better) Translates to: SSSFKHWLVLFQ*LVHLLGEMIYS Trigger: GGAGTAGATCATCTCTCCCAGTAAATGAACGAGTCATTGAAACAACACCAACCAGTGCTTGAACGATGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| 3UTR CCA 72 bp | GTGAAAGTATGCCATCTTCATCGTTCAAGCACTGGTTaGTGTTGTTTCAATGACTCGTTCATTTACTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: VKVCHLHRSSTG*CCFNDSFIYWE Trigger: CTCCCAGTAAATGAACGAGTCATTGAAACAACACCAACCAGTGCTTGAACGATGAAGATGGCATACTTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| 3UTR TCA 72 bp | TGGGGAATGTTCATCAGAGTACATATGATGGCAAAGTaGAGTCTCAGACATCTACCTGGGTTAAGATTAACC | + |
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Preference number: 3 (lower is better) Translates to: WGMFIRVHMMAK*SLRHLPGLRLT Trigger: GGTTAATCTTAACCCAGGTAGATGTCTGAGACTTCACTTTGCCATCATATGTACTCTGATGAACATTCCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| 3UTR TCA 72 bp | ATGATCTACTCCATGGATATGTGGAGAAATGAAACATaGCCACACTCCTGTGAACAAAATTGTTGCTCTATC | + |
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Preference number: 3 (lower is better) Translates to: MIYSMDMWRNET*PHSCEQNCCSI Trigger: GATAGAGCAACAATTTTGTTCACAGGAGTGTGGTCATGTTTCATTTCTCCACATATCCATGGAGTAGATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| 3UTR TCA 72 bp | TGTTGTTTCAATGACTCGTTCATTTACTGGGAGAGATaGTCTACTCCATGGATATGTGGAGAAATGAAACAT | + |
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Preference number: 3 (lower is better) Translates to: CCFNDSFIYWER*STPWICGEMKH Trigger: ATGTTTCATTTCTCCACATATCCATGGAGTAGATCATCTCTCCCAGTAAATGAACGAGTCATTGAAACAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS-3UTR TCA 90 bp | CATCAGAGTACATATGATGGCAAAGTGAAGTCTCAGACATCTACCTGGGTTAAGGCAGATCTACTGGCTTaGGTCTCTCCATGGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: HQSTYDGKVKSQTSTWVKADLLA*VSPWKS Trigger: TGACTTCCATGGAGAGACTCAAGCCAGTAGATCTGC...CTTAACCCAGGTAGATGTCTGAGACTTCACTTTGCCATCATATGTACTCTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS-3UTR TCA 90 bp | GTTCATCAGAGTACATATGATGGCAAAGTGAAGTCTCAGACATCTACCTGGGTTGTTCCTTGCATTTCTTaGAGTCTTCACAGGCGACCC | + |
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Preference number: 4 (lower is better) Translates to: VHQSTYDGKVKSQTSTWVVPCIS*SLHRRP Trigger: GGGTCGCCTGTGAAGACTTCAAGAAATGCAAGGAAC...AACCCAGGTAGATGTCTGAGACTTCACTTTGCCATCATATGTACTCTGATGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS-3UTR CCA 90 bp | GTTCATCAGAGTACATATGATGGCAAAGTGAAGTCTCAGACATCTACCTGGGTTAGAGGGCAGATCTACTaGCTTGAGTCTCTCCATGGA | + |
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Preference number: 4 (lower is better) Translates to: VHQSTYDGKVKSQTSTWVRGQIY*LESLHG Trigger: TCCATGGAGAGACTCAAGCCAGTAGATCTGCCCTCT...AACCCAGGTAGATGTCTGAGACTTCACTTTGCCATCATATGTACTCTGATGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS-3UTR TCA 90 bp | CATCAGAGTACATATGATGGCAAAGTGAAGTCTCAGACATCTACCTGGGTTAAGAACTGTCATGTTCCATaGGCTGGTACACTCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: HQSTYDGKVKSQTSTWVKNCHVP*AGTLCF Trigger: AAAGCAGAGTGTACCAGCTCATGGAACATGACAGTT...CTTAACCCAGGTAGATGTCTGAGACTTCACTTTGCCATCATATGTACTCTGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS-3UTR GCA 90 bp | TGCTTGTGTGAAAGTATGCCATCTTCATCGTTCAAGCACTGGTTGGTGTTGTTTGTACACTCTGCTTTGTaGCGTATCAAAACTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: CLCESMPSSSFKHWLVLFVHSAL*RIKTVE Trigger: CTCCACAGTTTTGATACGGCACAAAGCAGAGTGTAC...AAACAACACCAACCAGTGCTTGAACGATGAAGATGGCATACTTTCACACAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS-3UTR TCA 90 bp | AAAGTATGCCATCTTCATCGTTCAAGCACTGGTTGGTGTTGTTTCAATGACTCGCCTTTGCTTTTAGGATaGTTTGTTGAGGTTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: KVCHLHRSSTGWCCFNDSPLLLG*FVEVPC Trigger: GCAAGGAACCTCAACAAATCATCCTAAAAGCAAAGG...CGAGTCATTGAAACAACACCAACCAGTGCTTGAACGATGAAGATGGCATACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS-3UTR TCA 90 bp | GTTCATCAGAGTACATATGATGGCAAAGTGAAGTCTCAGACATCTACCTGGGTTAGGTTTGTTGGTCTCTaGGGTCTTCCTTCTATCAAA | + |
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Preference number: 4 (lower is better) Translates to: VHQSTYDGKVKSQTSTWVRFVGL*GLPSIK Trigger: TTTGATAGAAGGAAGACCTCAGAGACCAACAAACCT...AACCCAGGTAGATGTCTGAGACTTCACTTTGCCATCATATGTACTCTGATGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS-3UTR CCA 90 bp | CCAAATATGAGACATAAATGCTTGTGTGAAAGTATGCCATCTTCATCGTTCAAGTCTCCTAAGGTTTGTTaGTCTCTGAGGTCTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PNMRHKCLCESMPSSSFKSPKVC*SLRSSF Trigger: GAAGGAAGACCTCAGAGACCAACAAACCTTAGGAGA...CTTGAACGATGAAGATGGCATACTTTCACACAAGCATTTATGTCTCATATTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS-3UTR TCA 90 bp | CCAAATATGAGACATAAATGCTTGTGTGAAAGTATGCCATCTTCATCGTTCAAGGAGCAATTTGTCAAATaGTTCAGCCCATTTCACTGC | + |
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Preference number: 4 (lower is better) Translates to: PNMRHKCLCESMPSSSFKEQFVK*FSPFHC Trigger: GCAGTGAAATGGGCTGAATCATTTGACAAATTGCTC...CTTGAACGATGAAGATGGCATACTTTCACACAAGCATTTATGTCTCATATTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS-3UTR TCA 90 bp | CCAAATATGAGACATAAATGCTTGTGTGAAAGTATGCCATCTTCATCGTTCAAGGGGCATCATTCTGAATaGATTTCTCATAGATTGCCT | + |
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Preference number: 4 (lower is better) Translates to: PNMRHKCLCESMPSSSFKGHHSE*ISHRLP Trigger: AGGCAATCTATGAGAAATTCATTCAGAATGATGCCC...CTTGAACGATGAAGATGGCATACTTTCACACAAGCATTTATGTCTCATATTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS-3UTR TCA 90 bp | CCAAATATGAGACATAAATGCTTGTGTGAAAGTATGCCATCTTCATCGTTCAAGTTTAGGATGATTTGTTaGGGTTCCTTGCATTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: PNMRHKCLCESMPSSSFKFRMIC*GSLHFL Trigger: CAAGAAATGCAAGGAACCTCAACAAATCATCCTAAA...CTTGAACGATGAAGATGGCATACTTTCACACAAGCATTTATGTCTCATATTTGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS CCA 90 bp | CTTCAGGAGAGACTCTTGTTTCTTTGGCCAAGAGGGCAGATCTACTaGCTTGAGTCTCTCCATGGAAGTCAGGCCTCTGTAGGAGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: LQERLLFLWPRGQIY*LESLHGSQASVGED Trigger: GTCTTCTCCTACAGAGGCCTGACTTCCATGGAGAGACTCAAGCCAGTAGATCTGCCCTCTTGGCCAAAGAAACAAGAGTCTCTCCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS TCA 90 bp | GGAGAGACTCTTGTTTCTTTGGCCAAGAGGGCAGATCTACTGGCTTaGGTCTCTCCATGGAAGTCAGGCCTCTGTAGGAGAAGACTTAGT | + |
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Preference number: 5 (lower is better) Translates to: GETLVSLAKRADLLA*VSPWKSGLCRRRLS Trigger: ACTAAGTCTTCTCCTACAGAGGCCTGACTTCCATGGAGAGACTCAAGCCAGTAGATCTGCCCTCTTGGCCAAAGAAACAAGAGTCTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS GCA 90 bp | GCGTTTATAACTGTCATGTTCCATGAGCTGGTACACTCTGCTTTGTaGCGTATCAAAACTGTGGAGAGTGGGCTGGGCGATGCTCTTAGC | + |
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Preference number: 5 (lower is better) Translates to: AFITVMFHELVHSAL*RIKTVESGLGDALS Trigger: GCTAAGAGCATCGCCCAGCCCACTCTCCACAGTTTTGATACGGCACAAAGCAGAGTGTACCAGCTCATGGAACATGACAGTTATAAACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS CCA 90 bp | TGTTCCATGAGCTGGTACACTCTGCTTTGTGCCGTATCAAAACTGTaGAGAGTGGGCTGGGCGATGCTCTTAGCAATTACTTCTTTAGTA | + |
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Preference number: 5 (lower is better) Translates to: CSMSWYTLLCAVSKL*RVGWAMLLAITSLV Trigger: TACTAAAGAAGTAATTGCTAAGAGCATCGCCCAGCCCACTCTCCACAGTTTTGATACGGCACAAAGCAGAGTGTACCAGCTCATGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS-3UTR CAA 90 bp | AAAGTATGCCATCTTCATCGTTCAAGCACTGGTTGGTGTTGTTTCAATGACTCGTTTTGGCCTCGATGCTaGTTTCTTCTTTCCCTGACC | + |
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Preference number: 5 (lower is better) Translates to: KVCHLHRSSTGWCCFNDSFWPRC*FLLSLT Trigger: GGTCAGGGAAAGAAGAAACAAGCATCGAGGCCAAAA...CGAGTCATTGAAACAACACCAACCAGTGCTTGAACGATGAAGATGGCATACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS-3UTR CAA 90 bp | GTTCATCAGAGTACATATGATGGCAAAGTGAAGTCTCAGACATCTACCTGGGTTCTGGTACACTCTGCTTaGTGCCGTATCAAAACTGTG | + |
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Preference number: 5 (lower is better) Translates to: VHQSTYDGKVKSQTSTWVLVHSA*CRIKTV Trigger: CACAGTTTTGATACGGCACAAAGCAGAGTGTACCAG...AACCCAGGTAGATGTCTGAGACTTCACTTTGCCATCATATGTACTCTGATGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS TCA 90 bp | GGTAAAAGCATCCACTCCATCTCTATGAGAGAGCAATTTGTCAAATaGTTCAGCCCATTTCACTGCTTCTTCAGGAGAGACTCTTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: GKSIHSISMREQFVK*FSPFHCFFRRDSCF Trigger: GAAACAAGAGTCTCTCCTGAAGAAGCAGTGAAATGGGCTGAATCATTTGACAAATTGCTCTCTCATAGAGATGGAGTGGATGCTTTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS TCA 90 bp | AGTAGGTCTCAGATTTCAAAAAGCGTTTATAACTGTCATGTTCCATaGGCTGGTACACTCTGCTTTGTGCCGTATCAAAACTGTGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: SRSQISKSVYNCHVP*AGTLCFVPYQNCGE Trigger: CTCTCCACAGTTTTGATACGGCACAAAGCAGAGTGTACCAGCTCATGGAACATGACAGTTATAAACGCTTTTTGAAATCTGAGACCTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS-3UTR CAA 90 bp | CCAAATATGAGACATAAATGCTTGTGTGAAAGTATGCCATCTTCATCGTTCAAGCTTCAGGAGAGACTCTaGTTTCTTTGGCCAAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: PNMRHKCLCESMPSSSFKLQERL*FLWPRG Trigger: CCCTCTTGGCCAAAGAAACAAGAGTCTCTCCTGAAG...CTTGAACGATGAAGATGGCATACTTTCACACAAGCATTTATGTCTCATATTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS-3UTR CAA 90 bp | CCAAATATGAGACATAAATGCTTGTGTGAAAGTATGCCATCTTCATCGTTCAAGGGTTCCTTGCATTTCTaGAAGTCTTCACAGGCGACC | + |
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Preference number: 5 (lower is better) Translates to: PNMRHKCLCESMPSSSFKGSLHF*KSSQAT Trigger: GGTCGCCTGTGAAGACTTCAAGAAATGCAAGGAACC...CTTGAACGATGAAGATGGCATACTTTCACACAAGCATTTATGTCTCATATTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS TCA 72 bp | CTTGTTTCTTTGGCCAAGAGGGCAGATCTACTGGCTTaGGTCTCTCCATGGAAGTCAGGCCTCTGTAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LVSLAKRADLLA*VSPWKSGLCRR Trigger: TCTCCTACAGAGGCCTGACTTCCATGGAGAGACTCAAGCCAGTAGATCTGCCCTCTTGGCCAAAGAAACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS GCA 72 bp | ACTGTCATGTTCCATGAGCTGGTACACTCTGCTTTGTaGCGTATCAAAACTGTGGAGAGTGGGCTGGGCGAT | + |
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Preference number: 6 (lower is better) Translates to: TVMFHELVHSAL*RIKTVESGLGD Trigger: ATCGCCCAGCCCACTCTCCACAGTTTTGATACGGCACAAAGCAGAGTGTACCAGCTCATGGAACATGACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS CCA 72 bp | AGCTGGTACACTCTGCTTTGTGCCGTATCAAAACTGTaGAGAGTGGGCTGGGCGATGCTCTTAGCAATTACT | + |
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Preference number: 6 (lower is better) Translates to: SWYTLLCAVSKL*RVGWAMLLAIT Trigger: AGTAATTGCTAAGAGCATCGCCCAGCCCACTCTCCACAGTTTTGATACGGCACAAAGCAGAGTGTACCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS CAA 72 bp | ATAACTGTCATGTTCCATGAGCTGGTACACTCTGCTTaGTGCCGTATCAAAACTGTGGAGAGTGGGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: ITVMFHELVHSA*CRIKTVESGLG Trigger: GCCCAGCCCACTCTCCACAGTTTTGATACGGCACAAAGCAGAGTGTACCAGCTCATGGAACATGACAGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS CAA 90 bp | AAAGCGTTTATAACTGTCATGTTCCATGAGCTGGTACACTCTGCTTaGTGCCGTATCAAAACTGTGGAGAGTGGGCTGGGCGATGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: KAFITVMFHELVHSA*CRIKTVESGLGDAL Trigger: AAGAGCATCGCCCAGCCCACTCTCCACAGTTTTGATACGGCACAAAGCAGAGTGTACCAGCTCATGGAACATGACAGTTATAAACGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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| CDS TCA 72 bp | ATCCACTCCATCTCTATGAGAGAGCAATTTGTCAAATaGTTCAGCCCATTTCACTGCTTCTTCAGGAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: IHSISMREQFVK*FSPFHCFFRRD Trigger: GTCTCTCCTGAAGAAGCAGTGAAATGGGCTGAATCATTTGACAAATTGCTCTCTCATAGAGATGGAGTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027603.4 |
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