Pregenerated sensors for RGS17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019775Ensembl transcript IDs: ENSMUST00000064225.14, ENSMUST00000117676.8, ENSMUST00000131996.8
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGTTAAGAGAACCGAAGACCCTGATTCAGTACCCAGAACCCATATaGAGGCTTAAGACCATCTGTTGCTCCAATTCCAGAGGACTCTTC | + |
|
Preference number: 1 (lower is better) Translates to: QLREPKTLIQYPEPI*RLKTICCSNSRGLF Trigger: GAAGAGTCCTCTGGAATTGGAGCAACAGATGGTCTTAAGCCTCCATATGGGTTCTGGGTACTGAATCAGGGTCTTCGGTTCTCTTAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR TCA 90 bp | GCTTTGGAACCTCCTTGTACACAGGTTCCAAAGACACAGCAACTTTaGAATCAAACACTGCAAATGCCTAGGTTAGAGATGAGGACTCTC | + |
|
Preference number: 1 (lower is better) Translates to: ALEPPCTQVPKTQQL*NQTLQMPRLEMRTL Trigger: GAGAGTCCTCATCTCTAACCTAGGCATTTGCAGTGTTTGATTTCAAAGTTGCTGTGTCTTTGGAACCTGTGTACAAGGAGGTTCCAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR GCA 90 bp | AACTTAGAGCTTTATGTCATGAGAATCAGAGTCCACAACCCCATTTaGCCAACGAAGGCTACACTCCATCTCCCTGTTTTCTACAGAATG | + |
|
Preference number: 1 (lower is better) Translates to: NLELYVMRIRVHNPI*PTKATLHLPVFYRM Trigger: CATTCTGTAGAAAACAGGGAGATGGAGTGTAGCCTTCGTTGGGCAAATGGGGTTGTGGACTCTGATTCTCATGACATAAAGCTCTAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR TCA 90 bp | CATATGCCCTTTTCATGCCATCAGAGCATCGGTGCTAACTTTGGATaGTGTCATAATAAGTCAGAAAGAGAAGAGTCACCCCTTCAGCAT | + |
|
Preference number: 1 (lower is better) Translates to: HMPFSCHQSIGANFG*CHNKSEREESPLQH Trigger: ATGCTGAAGGGGTGACTCTTCTCTTTCTGACTTATTATGACATCATCCAAAGTTAGCACCGATGCTCTGATGGCATGAAAAGGGCATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR TCA 90 bp | TTTGCCCAACGAAGGCTACACTCCATCTCCCTGTTTTCTACAGAATaGTGGTCTGGTATAGTCTCTTCAATCAGTGGGAAAGAAAACATG | + |
|
Preference number: 1 (lower is better) Translates to: FAQRRLHSISLFSTE*WSGIVSSISGKENM Trigger: CATGTTTTCTTTCCCACTGATTGAAGAGACTATACCAGACCATCATTCTGTAGAAAACAGGGAGATGGAGTGTAGCCTTCGTTGGGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CCA 90 bp | ACGAAGGCTACACTCCATCTCCCTGTTTTCTACAGAATGATGGTCTaGTATAGTCTCTTCAATCAGTGGGAAAGAAAACATGTCCCTTAT | + |
|
Preference number: 1 (lower is better) Translates to: TKATLHLPVFYRMMV*YSLFNQWERKHVPY Trigger: ATAAGGGACATGTTTTCTTTCCCACTGATTGAAGAGACTATACCAGACCATCATTCTGTAGAAAACAGGGAGATGGAGTGTAGCCTTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR TCA 90 bp | GGCAGTGAGGAACAAATGAGAAGAAGATATCATGAGACACTGGTATaGAAATGTCATGATGAACCCTCTTTGTGTGCTAACCTAAACTTT | + |
|
Preference number: 1 (lower is better) Translates to: GSEEQMRRRYHETLV*KCHDEPSLCANLNF Trigger: AAAGTTTAGGTTAGCACACAAAGAGGGTTCATCATGACATTTTCATACCAGTGTCTCATGATATCTTCTTCTCATTTGTTCCTCACTGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CCA 90 bp | ATTAAATCAAACTTGACTATATCAAGTGTTGTGCTCTTGAAATGGTaGCAGACACCAGTTGTGGGCTTTTGTTTGTTTATTATAGCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: IKSNLTISSVVLLKW*QTPVVGFCLFIIAL Trigger: CAGAGCTATAATAAACAAACAAAAGCCCACAACTGGTGTCTGCCACCATTTCAAGAGCACAACACTTGATATAGTCAAGTTTGATTTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CCA 90 bp | AGGAAGTCTACTATTGTACATAGGGAAATGATGAAATCTGTTCAATaGAAGAAAAACCCAGACAAACTTGAGCTGCAAGGAAAAGAATCT | + |
|
Preference number: 1 (lower is better) Translates to: RKSTIVHREMMKSVQ*KKNPDKLELQGKES Trigger: AGATTCTTTTCCTTGCAGCTCAAGTTTGTCTGGGTTTTTCTTCCATTGAACAGATTTCATCATTTCCCTATGTACAATAGTAGACTTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR TCA 90 bp | CCATATTGCACAAAAGTCCTTAAATACAGATACAAGGTATGCTACTaGTTTAATAGCACAAGTAAAGGGCAGACGAAGCAGTTTTACTTT | + |
|
Preference number: 1 (lower is better) Translates to: PYCTKVLKYRYKVCY*FNSTSKGQTKQFYF Trigger: AAAGTAAAACTGCTTCGTCTGCCCTTTACTTGTGCTATTAAATCAGTAGCATACCTTGTATCTGTATTTAAGGACTTTTGTGCAATATGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| 3UTR CAA 90 bp | GGGTCTCCCCAGGGAGCGATTCACCCACTAGGAATTAAATCAAACTaGACTATATCAAGTGTTGTGCTCTTGAAATGGTGGCAGACACCA | + |
|
Preference number: 2 (lower is better) Translates to: GSPQGAIHPLGIKSN*TISSVVLLKWWQTP Trigger: TGGTGTCTGCCACCATTTCAAGAGCACAACACTTGATATAGTCAAGTTTGATTTAATTCCTAGTGGGTGAATCGCTCCCTGGGGAGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR GCA 90 bp | GCACAAGTAAAGGGCAGACGAAGCAGTTTTACTTTGCACATGCGGCCTCTAGAGACTAGGAACACAATTTaGTTGCAAGTAGAGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: AQVKGRRSSFTLHMRPLETRNTI*LQVEQV Trigger: CACTTGCTCTACTTGCAAGCAAATTGTGTTCCTAGT...CTCTAGAGGCCGCATGTGCAAAGTAAAACTGCTTCGTCTGCCCTTTACTTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| 3UTR CAA 90 bp | CAACTTAGAGCTTTATGTCATGAGAATCAGAGTCCACAACCCCATTaGCCCAACGAAGGCTACACTCCATCTCCCTGTTTTCTACAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: QLRALCHENQSPQPH*PNEGYTPSPCFLQN Trigger: ATTCTGTAGAAAACAGGGAGATGGAGTGTAGCCTTCGTTGGGCAAATGGGGTTGTGGACTCTGATTCTCATGACATAAAGCTCTAAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTCTGTAACAAAAATGCCAGAATTTGGGCAGTGAACAACCAGAGGGCTCACCCACGGCCAATTTGTTaGCAATTGTTTCTAAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LFCNKNARIWAVNNQRAHPRPIC*QLFLRD Trigger: GTCTCTTAGAAACAATTGCCAACAAATTGGCCGTGG...GTGAGCCCTCTGGTTGTTCACTGCCCAAATTCTGGCATTTTTGTTACAGAAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATGCCAGAATTTGGGCAGTGAACAACCAGAGGGCTCACACAGTAAGATCCTTCCACGGCCAATTTGTTaGCAATTGTTTCTAAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: KCQNLGSEQPEGSHSKILPRPIC*QLFLRD Trigger: GTCTCTTAGAAACAATTGCCAACAAATTGGCCGTGG...AAGGATCTTACTGTGTGAGCCCTCTGGTTGTTCACTGCCCAAATTCTGGCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAATGCCTAGGTTAGAGATGAGGACTCTCTCAAGGAGCCTTATCTCTTCCATTAACACAGAACGAGGATaGTGGTACACTATACATGTG | + |
|
Preference number: 2 (lower is better) Translates to: QMPRLEMRTLSRSLISSINTERG*WYTIHV Trigger: CACATGTATAGTGTACCATCATCCTCGTTCTGTGTT...AATGGAAGAGATAAGGCTCCTTGAGAGAGTCCTCATCTCTAACCTAGGCATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CAA 90 bp | CAAGGTGAATACGCCACAAGTCAGATGCAATTCCTCACTATGCTTTaGACAGTGCTACATGTAGGCATTCCTTTACTAGTTCTTTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: QGEYATSQMQFLTML*TVLHVGIPLLVLFP Trigger: AGGGAAAAGAACTAGTAAAGGAATGCCTACATGTAGCACTGTCAAAAGCATAGTGAGGAATTGCATCTGACTTGTGGCGTATTCACCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CAA 90 bp | ACATTCATATGCCCTTTTCATGCCATCAGAGCATCGGTGCTAACTTaGGATGATGTCATAATAAGTCAGAAAGAGAAGAGTCACCCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: TFICPFHAIRASVLT*DDVIISQKEKSHPF Trigger: GAAGGGGTGACTCTTCTCTTTCTGACTTATTATGACATCATCCAAAGTTAGCACCGATGCTCTGATGGCATGAAAAGGGCATATGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAACCTCCTTGTACACAGGTTCCAAAGACACAGCAACTTTGAAATCAAACACTAACACAGAACGAGGATaGTGGTACACTATACATGTG | + |
|
Preference number: 2 (lower is better) Translates to: GTSLYTGSKDTATLKSNTNTERG*WYTIHV Trigger: CACATGTATAGTGTACCATCATCCTCGTTCTGTGTT...AGTGTTTGATTTCAAAGTTGCTGTGTCTTTGGAACCTGTGTACAAGGAGGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR TCA 90 bp | CGAAATCAGCTGTCATTTCAAAAGGAAATGTGCCCAAATCTTAGACAGTTTGTTCAAGTGTTGTGCTCTTaGAATGGTGGCAGACACCAG | + |
|
Preference number: 2 (lower is better) Translates to: RNQLSFQKEMCPNLRQFVQVLCS*NGGRHQ Trigger: CTGGTGTCTGCCACCATTTCAAGAGCACAACACTTG...AACAAACTGTCTAAGATTTGGGCACATTTCCTTTTGAAATGACAGCTGATTTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTTTGGTAGGTTTTAGTGGTAAATATTTGCAATTGTGGCAAGTGGAGAATTGCCATATGCCCTTTTCATaGCATCAGAGCATCGGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GLVGFSGKYLQLWQVENCHMPFS*HQSIGA Trigger: AGCACCGATGCTCTGATGGCATGAAAAGGGCATATG...GCAATTCTCCACTTGCCACAATTGCAAATATTTACCACTAAAACCTACCAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCAGAAAGAGAAGAGTCACCCCTTCAGCATTAGCATGTCTATGTGTAAGATCCTATGTAATAGCCCTTTaGATCATAGCTCCTGAATTC | + |
|
Preference number: 2 (lower is better) Translates to: VRKRRVTPSALACLCVRSYVIAL*IIAPEF Trigger: GAATTCAGGAGCTATGATTCAAAGGGCTATTACATA...GGATCTTACACATAGACATGCTAATGCTGAAGGGGTGACTCTTCTCTTTCTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAACCTCCTTGTACACAGGTTCCAAAGACACAGCAACTTTGAAATCAAACACTAAGGTCATAAATACATaGTGTGGTCAGGGGAGTATT | + |
|
Preference number: 2 (lower is better) Translates to: GTSLYTGSKDTATLKSNTKVINT*CGQGSI Trigger: AATACTCCCCTGACCACAGCATGTATTTATGACCTT...AGTGTTTGATTTCAAAGTTGCTGTGTCTTTGGAACCTGTGTACAAGGAGGTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR GCA 90 bp | CGAAATCAGCTGTCATTTCAAAAGGAAATGTGCCCAAATCTTAGACAGTTTGTTAGAAATCAAAGCCAGTaGTCCTCCATGCACTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RNQLSFQKEMCPNLRQFVRNQSQ*SSMHCV Trigger: CACACAGTGCATGGAGGAGCACTGGCTTTGATTTCT...AACAAACTGTCTAAGATTTGGGCACATTTCCTTTTGAAATGACAGCTGATTTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATGCCAGAATTTGGGCAGTGAACAACCAGAGGGCTCACACAGTAAGATCCTTCCCCAAACAGAATCATaGATAACCTTGATAAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: KCQNLGSEQPEGSHSKILPQTES*ITLIKM Trigger: CATTTTTATCAAGGTTATCCATGATTCTGTTTGGGG...AAGGATCTTACTGTGTGAGCCCTCTGGTTGTTCACTGCCCAAATTCTGGCATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CCA 90 bp | CGAAATCAGCTGTCATTTCAAAAGGAAATGTGCCCAAATCTTAGACAGTTTGTTGTTGTGCTCTTGAAATaGTGGCAGACACCAGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RNQLSFQKEMCPNLRQFVVVLLK*WQTPVV Trigger: CACAACTGGTGTCTGCCACCATTTCAAGAGCACAAC...AACAAACTGTCTAAGATTTGGGCACATTTCCTTTTGAAATGACAGCTGATTTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCAGAAAGAGAAGAGTCACCCCTTCAGCATTAGCATGTCTATGTGTAAGATCCATGAGACAGGATATCTaGAGATTGTTTTGTGCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: VRKRRVTPSALACLCVRSMRQDI*RLFCAY Trigger: ATAAGCACAAAACAATCTGCAGATATCCTGTCTCAT...GGATCTTACACATAGACATGCTAATGCTGAAGGGGTGACTCTTCTCTTTCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR TCA 90 bp | TCACCGCTGTATACATCACCTACACAATCTCCTTTGCTTTCCACAATAGATATGTATGTAATAGCCCTTTaGATCATAGCTCCTGAATTC | + |
|
Preference number: 2 (lower is better) Translates to: SPLYTSPTQSPLLSTIDMYVIAL*IIAPEF Trigger: GAATTCAGGAGCTATGATTCAAAGGGCTATTACATA...CATATCTATTGTGGAAAGCAAAGGAGATTGTGTAGGTGATGTATACAGCGGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACCACGGCCAATTTGTTGGCAATTGTTTCTAAGAGACCATATTGCACAAAAGACTAGGAACACAATTTaGTTGCAAGTAGAGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KPRPICWQLFLRDHIAQKTRNTI*LQVEQV Trigger: CACTTGCTCTACTTGCAAGCAAATTGTGTTCCTAGT...CTTTTGTGCAATATGGTCTCTTAGAAACAATTGCCAACAAATTGGCCGTGGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| 3UTR-3UTR GCA 90 bp | CGAAATCAGCTGTCATTTCAAAAGGAAATGTGCCCAAATCTTAGACAGTTTGTTACGCCACAAGTCAGATaGAATTCCTCACTATGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: RNQLSFQKEMCPNLRQFVTPQVR*NSSLCF Trigger: AAAGCATAGTGAGGAATTGCATCTGACTTGTGGCGT...AACAAACTGTCTAAGATTTGGGCACATTTCCTTTTGAAATGACAGCTGATTTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CCA 90 bp | GTATGCTCCTTTCTAGGGACAGCATTTTATGATCATCAGAAATTTAAGAACAGATGTGCAAATCAGCTTTaGAACCTCCTTGTACACAGG | + |
|
Preference number: 2 (lower is better) Translates to: VCSFLGTAFYDHQKFKNRCANQL*NLLVHR Trigger: CCTGTGTACAAGGAGGTTCCAAAGCTGATTTGCACA...TCTGTTCTTAAATTTCTGATGATCATAAAATGCTGTCCCTAGAAAGGAGCATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CAA 90 bp | CCACTAGGAATTAAATCAAACTTGACTATATCAAGTGTTGTGCTCTaGAAATGGTGGCAGACACCAGTTGTGGGCTTTTGTTTGTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: PLGIKSNLTISSVVL*KWWQTPVVGFCLFI Trigger: AATAAACAAACAAAAGCCCACAACTGGTGTCTGCCACCATTTCAAGAGCACAACACTTGATATAGTCAAGTTTGATTTAATTCCTAGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CCA 90 bp | TCACCGCTGTATACATCACCTACACAATCTCCTTTGCTTTCCACAATAGATATGCCCCAAACAGAATCATaGATAACCTTGATAAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: SPLYTSPTQSPLLSTIDMPQTES*ITLIKM Trigger: CATTTTTATCAAGGTTATCCATGATTCTGTTTGGGG...CATATCTATTGTGGAAAGCAAAGGAGATTGTGTAGGTGATGTATACAGCGGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CCA 90 bp | TCACCGCTGTATACATCACCTACACAATCTCCTTTGCTTTCCACAATAGATATGATATTACATTTTTCCTaGTCATGTGCACCAACTCAT | + |
|
Preference number: 2 (lower is better) Translates to: SPLYTSPTQSPLLSTIDMILHFS*SCAPTH Trigger: ATGAGTTGGTGCACATGACCAGGAAAAATGTAATAT...CATATCTATTGTGGAAAGCAAAGGAGATTGTGTAGGTGATGTATACAGCGGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CCA 90 bp | CGAAATCAGCTGTCATTTCAAAAGGAAATGTGCCCAAATCTTAGACAGTTTGTTAGTCACTGGCATCCATaGAACAGGGATATAATAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RNQLSFQKEMCPNLRQFVSHWHP*NRDIIK Trigger: CTTTATTATATCCCTGTTCCATGGATGCCAGTGACT...AACAAACTGTCTAAGATTTGGGCACATTTCCTTTTGAAATGACAGCTGATTTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CAA 90 bp | GTTCAGAGGACTAGGAACACAATTTGCTTGCAAGTAGAGCAAGTGTaGAATCAAACAAACTTAATTTGGCAATTCATTGTCTCATATAGG | + |
|
Preference number: 2 (lower is better) Translates to: VQRTRNTICLQVEQV*NQTNLIWQFIVSYR Trigger: CCTATATGAGACAATGAATTGCCAAATTAAGTTTGTTTGATTCAACACTTGCTCTACTTGCAAGCAAATTGTGTTCCTAGTCCTCTGAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGAGACGGTATACTAAACACAGTATGTAGCATGGTTAAATATCACTGTTACACTAGGAACACAATTTaGTTGCAAGTAGAGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: FRDGILNTVCSMVKYHCYTRNTI*LQVEQV Trigger: CACTTGCTCTACTTGCAAGCAAATTGTGTTCCTAGT...GTAACAGTGATATTTAACCATGCTACATACTGTGTTTAGTATACCGTCTCTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| 3UTR-3UTR GCA 90 bp | CGAAATCAGCTGTCATTTCAAAAGGAAATGTGCCCAAATCTTAGACAGTTTGTTTTGTTAACATTCATATaGCCTTTTCATGCCATCAGA | + |
|
Preference number: 2 (lower is better) Translates to: RNQLSFQKEMCPNLRQFVLLTFI*PFHAIR Trigger: TCTGATGGCATGAAAAGGGCATATGAATGTTAACAA...AACAAACTGTCTAAGATTTGGGCACATTTCCTTTTGAAATGACAGCTGATTTCG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR GCA 72 bp | GATCACTTGGCAGCAGAGGCTGTACCCAACAGGCAATaGTTAAATCAGGTGACAGGGCGAACAGCAACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DHLAAEAVPNRQ*LNQVTGRTATA Trigger: TGCTGTTGCTGTTCGCCCTGTCACCTGATTTAAGCATTGCCTGTTGGGTACAGCCTCTGCTGCCAAGTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CCA 72 bp | GCAATGGCTAATGGCAGGGACTGTGCAAATCAGCTTTaGAACCTCCTTGTACACAGGTTCCAAAGACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: AMANGRDCANQL*NLLVHRFQRHS Trigger: GCTGTGTCTTTGGAACCTGTGTACAAGGAGGTTCCAAAGCTGATTTGCACAGTCCCTGCCATTAGCCATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CCA 72 bp | AAGAAACACAAAGAGAGGAAACAACAGGAGGTCGTGTaGTTACAGGATGGGAAGGGCAGAGAAGGCAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KKHKERKQQEVV*LQDGKGREGKR Trigger: CCTCTTGCCTTCTCTGCCCTTCCCATCCTGTAACCACACGACCTCCTGTTGTTTCCTCTCTTTGTGTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CCA 72 bp | AAGACCATCTGTTGCTCCAATTCCAGAGGACTCTTCTaGCCTCAAGTGCTGCACACATGTGGTCACATACAT | + |
|
Preference number: 3 (lower is better) Translates to: KTICCSNSRGLF*PQVLHTCGHIH Trigger: ATGTATGTGACCACATGTGTGCAGCACTTGAGGCCAGAAGAGTCCTCTGGAATTGGAGCAACAGATGGTCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGACAGTCAGTCACTGGCATCCATGGAACAGGGATATAATAAAGTCTACATCATGTGCACCAACTCATaGTGCCCCAAACACAGAACG | + |
|
Preference number: 3 (lower is better) Translates to: CDSQSLASMEQGYNKVYIMCTNS*CPKHRT Trigger: CGTTCTGTGTTTGGGGCACAATGAGTTGGTGCACAT...GATGTAGACTTTATTATATCCCTGTTCCATGGATGCCAGTGACTGACTGTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CCA 72 bp | AGTAGATATCATGTAATAAGGTTGGCTATTCGGGGCTaGACAGGTGGCTCAACAGTTAAGAGAACCGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SRYHVIRLAIRG*TGGSTVKRTED Trigger: GTCTTCGGTTCTCTTAACTGTTGAGCCACCTGTCCAGCCCCGAATAGCCAACCTTATTACATGATATCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTCTGTAACAAAAATGCCAGAATTTGGGCAGTGAACAACCAGAGGGCTCACACCACGGCCAATTTGTaGGCAATTGTTTCTAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LFCNKNARIWAVNNQRAHTTANL*AIVSKR Trigger: TCTCTTAGAAACAATTGCCAACAAATTGGCCGTGGT...GTGAGCCCTCTGGTTGTTCACTGCCCAAATTCTGGCATTTTTGTTACAGAAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGTGAATACGCCACAAGTCAGATGCAATTCCTCACTATGCTTTTGACAGTGCAAAAATGCCAGAATTaGGGCAGTGAACAACCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QGEYATSQMQFLTMLLTVQKCQN*GSEQPE Trigger: CTCTGGTTGTTCACTGCCCAAATTCTGGCATTTTTG...CACTGTCAAAAGCATAGTGAGGAATTGCATCTGACTTGTGGCGTATTCACCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR TCA 72 bp | CTATGTGTAAGATCCACCTATGAAGACATCTGCCTTTaGGTCACCGCTGTATACATCACCTACACAATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LCVRSTYEDICL*VTAVYITYTIS Trigger: GGAGATTGTGTAGGTGATGTATACAGCGGTGACTCAAAGGCAGATGTCTTCATAGGTGGATCTTACACATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR TCA 72 bp | CGAAGGCTACACTCCATCTCCCTGTTTTCTACAGAATaGTGGTCTGGTATAGTCTCTTCAATCAGTGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RRLHSISLFSTE*WSGIVSSISGK Trigger: TTTCCCACTGATTGAAGAGACTATACCAGACCATCATTCTGTAGAAAACAGGGAGATGGAGTGTAGCCTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTGACAGTCAGTCACTGGCATCCATGGAACAGGGATATAATAAAGTCTACAAGGAACACAATTTGCTaGCAAGTAGAGCAAGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: PVTVSHWHPWNRDIIKSTRNTIC*QVEQVL Trigger: CAACACTTGCTCTACTTGCAAGCAAATTGTGTTCCT...TGTAGACTTTATTATATCCCTGTTCCATGGATGCCAGTGACTGACTGTCACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGTGAATACGCCACAAGTCAGATGCAATTCCTCACTATGCTTTTGACAGTGACCACGGCCAATTTGTaGGCAATTGTTTCTAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: QGEYATSQMQFLTMLLTVTTANL*AIVSKR Trigger: TCTCTTAGAAACAATTGCCAACAAATTGGCCGTGGT...CACTGTCAAAAGCATAGTGAGGAATTGCATCTGACTTGTGGCGTATTCACCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACCGCTGTATACATCACCTACACAATCTCCTTTGCTTTCCACAATAGATATGTGGCAGCTAGAAGGTTaGAGCACTGTACTGCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SPLYTSPTQSPLLSTIDMWQLEG*STVLPF Trigger: AAAAGGCAGTACAGTGCTCAAACCTTCTAGCTGCCA...CATATCTATTGTGGAAAGCAAAGGAGATTGTGTAGGTGATGTATACAGCGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTGGTAGGTTTTAGTGGTAAATATTTGCAATTGTGGCAAGTGGAGAATTGCATGTGCACCAACTCATaGTGCCCCAAACACAGAACG | + |
|
Preference number: 3 (lower is better) Translates to: GLVGFSGKYLQLWQVENCMCTNS*CPKHRT Trigger: CGTTCTGTGTTTGGGGCACAATGAGTTGGTGCACAT...GCAATTCTCCACTTGCCACAATTGCAAATATTTACCACTAAAACCTACCAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR TCA 72 bp | CCTCCTTGTACACAGGTTCCAAAGACACAGCAACTTTaGAATCAAACACTGCAAATGCCTAGGTTAGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: PPCTQVPKTQQL*NQTLQMPRLEM Trigger: CATCTCTAACCTAGGCATTTGCAGTGTTTGATTTCAAAGTTGCTGTGTCTTTGGAACCTGTGTACAAGGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR GCA 72 bp | ATTACATTTTTCCTGGTCATGTGCACCAACTCATTGTaGCCCAAACACAGAACGAGGATGATGGTACACTAT | + |
|
Preference number: 3 (lower is better) Translates to: ITFFLVMCTNSL*PKHRTRMMVHY Trigger: ATAGTGTACCATCATCCTCGTTCTGTGTTTGGGGCACAATGAGTTGGTGCACATGACCAGGAAAAATGTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CCA 72 bp | ATGCATGCAGGGTGTGGTAATATATTACATTTTTCCTaGTCATGTGCACCAACTCATTGTGCCCCAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: MHAGCGNILHFS*SCAPTHCAPNT Trigger: TGTGTTTGGGGCACAATGAGTTGGTGCACATGACCAGGAAAAATGTAATATATTACCACACCCTGCATGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTGGTAGGTTTTAGTGGTAAATATTTGCAATTGTGGCAAGTGGAGAATTGCGGTGGCAGACACCAGTaGTGGGCTTTTGTTTGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: GLVGFSGKYLQLWQVENCGGRHQ*WAFVCL Trigger: TAAACAAACAAAAGCCCACAACTGGTGTCTGCCACC...GCAATTCTCCACTTGCCACAATTGCAAATATTTACCACTAAAACCTACCAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR TCA 72 bp | TTCAGCATTAGCATGTCTATGTGTAAGATCCACCTATaGAGACATCTGCCTTTGAGTCACCGCTGTATACAT | + |
|
Preference number: 3 (lower is better) Translates to: FSISMSMCKIHL*RHLPLSHRCIH Trigger: ATGTATACAGCGGTGACTCAAAGGCAGATGTCTTCATAGGTGGATCTTACACATAGACATGCTAATGCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR TCA 72 bp | TTTTCATGCCATCAGAGCATCGGTGCTAACTTTGGATaGTGTCATAATAAGTCAGAAAGAGAAGAGTCACCC | + |
|
Preference number: 3 (lower is better) Translates to: FSCHQSIGANFG*CHNKSEREESP Trigger: GGGTGACTCTTCTCTTTCTGACTTATTATGACATCATCCAAAGTTAGCACCGATGCTCTGATGGCATGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR TCA 72 bp | CAGGGATGGTCATTTTATTGCCTATGTCTCCATCTTTaGGTGTGTATTTCTGTATGTGTGTGTGTGGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QGWSFYCLCLHL*VCISVCVCVVC Trigger: ACACACCACACACACACATACAGAAATACACACTCAAAGATGGAGACATAGGCAATAAAATGACCATCCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CCA 72 bp | TACAGAATGATGGTCTGGTATAGTCTCTTCAATCAGTaGGAAAGAAAACATGTCCCTTATGGCTGCTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: YRMMVWYSLFNQ*ERKHVPYGCLG Trigger: TCCTAAGCAGCCATAAGGGACATGTTTTCTTTCCCACTGATTGAAGAGACTATACCAGACCATCATTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CAA 90 bp | CGAAATCAGCTGTCATTTCAAAAGGAAATGTGCCCAAATCTTAGACAGTTTGTTTGGCAGCTAGAAGGTTaGAGCACTGTACTGCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RNQLSFQKEMCPNLRQFVWQLEG*STVLPF Trigger: AAAAGGCAGTACAGTGCTCAAACCTTCTAGCTGCCA...AACAAACTGTCTAAGATTTGGGCACATTTCCTTTTGAAATGACAGCTGATTTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACCACGGCCAATTTGTTGGCAATTGTTTCTAAGAGACCATATTGCACAAAAGAGGAACACAATTTGCTaGCAAGTAGAGCAAGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KPRPICWQLFLRDHIAQKRNTIC*QVEQVL Trigger: CAACACTTGCTCTACTTGCAAGCAAATTGTGTTCCT...CTTTTGTGCAATATGGTCTCTTAGAAACAATTGCCAACAAATTGGCCGTGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACCGCTGTATACATCACCTACACAATCTCCTTTGCTTTCCACAATAGATATGACATGTACAGAAAAATaGGCTTCAGAGACGGTATAC | + |
|
Preference number: 3 (lower is better) Translates to: SPLYTSPTQSPLLSTIDMTCTEK*ASETVY Trigger: GTATACCGTCTCTGAAGCCAATTTTTCTGTACATGT...CATATCTATTGTGGAAAGCAAAGGAGATTGTGTAGGTGATGTATACAGCGGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAACCTCCTTGTACACAGGTTCCAAAGACACAGCAACTTTGAAATCAAACACTCAGGGGATTTTGATATaGAAAGGTAAGACCTTGATA | + |
|
Preference number: 3 (lower is better) Translates to: GTSLYTGSKDTATLKSNTQGILI*KGKTLI Trigger: TATCAAGGTCTTACCTTTCAATATCAAAATCCCCTG...AGTGTTTGATTTCAAAGTTGCTGTGTCTTTGGAACCTGTGTACAAGGAGGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CCA 72 bp | ACACTCCATCTCCCTGTTTTCTACAGAATGATGGTCTaGTATAGTCTCTTCAATCAGTGGGAAAGAAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: TLHLPVFYRMMV*YSLFNQWERKH Trigger: ATGTTTTCTTTCCCACTGATTGAAGAGACTATACCAGACCATCATTCTGTAGAAAACAGGGAGATGGAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CAA 90 bp | CGAAATCAGCTGTCATTTCAAAAGGAAATGTGCCCAAATCTTAGACAGTTTGTTACCACGGCCAATTTGTaGGCAATTGTTTCTAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RNQLSFQKEMCPNLRQFVTTANL*AIVSKR Trigger: TCTCTTAGAAACAATTGCCAACAAATTGGCCGTGGT...AACAAACTGTCTAAGATTTGGGCACATTTCCTTTTGAAATGACAGCTGATTTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CAA 90 bp | GTATGCTCCTTTCTAGGGACAGCATTTTATGATCATCAGAAATTTAAGAACAGACAAAAATGCCAGAATTaGGGCAGTGAACAACCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VCSFLGTAFYDHQKFKNRQKCQN*GSEQPE Trigger: CTCTGGTTGTTCACTGCCCAAATTCTGGCATTTTTG...TCTGTTCTTAAATTTCTGATGATCATAAAATGCTGTCCCTAGAAAGGAGCATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACCGCTGTATACATCACCTACACAATCTCCTTTGCTTTCCACAATAGATATGCAGGGGATTTTGATATaGAAAGGTAAGACCTTGATA | + |
|
Preference number: 3 (lower is better) Translates to: SPLYTSPTQSPLLSTIDMQGILI*KGKTLI Trigger: TATCAAGGTCTTACCTTTCAATATCAAAATCCCCTG...CATATCTATTGTGGAAAGCAAAGGAGATTGTGTAGGTGATGTATACAGCGGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR TCA 72 bp | AGACAAAGAAACAGATTCAGATTCAGAAAGGTTACGTaGCTTTCCCTACCACCTCTGGATAGAAATACAACT | + |
|
Preference number: 3 (lower is better) Translates to: RQRNRFRFRKVT*LSLPPLDRNTT Trigger: AGTTGTATTTCTATCCAGAGGTGGTAGGGAAAGTCACGTAACCTTTCTGAATCTGAATCTGTTTCTTTGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR GCA 72 bp | GCAAGTGGAGAATTGCTAAGATTATTACACATGGTATaGTCCTTTCTAGGGACAGCATTTTATGATCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: ASGELLRLLHMV*SFLGTAFYDHQ Trigger: CTGATGATCATAAAATGCTGTCCCTAGAAAGGAGCATACCATGTGTAATAATCTTAGCAATTCTCCACTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CCA 72 bp | TCTGTATGCATGTGTGTGTGTGTGTGTGTGTGTGTATaGTGTTTGTCCATACCTATGCACATTTTAAAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SVCMCVCVCVCV*CLSIPMHILKF Trigger: AAACTTTAAAATGTGCATAGGTATGGACAAACACCATACACACACACACACACACACACACATGCATACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR TCA 72 bp | ACAAAAGTCCTTAAATACAGATACAAGGTATGCTACTaGTTTAATAGCACAAGTAAAGGGCAGACGAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TKVLKYRYKVCY*FNSTSKGQTKQ Trigger: CTGCTTCGTCTGCCCTTTACTTGTGCTATTAAATCAGTAGCATACCTTGTATCTGTATTTAAGGACTTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| 3UTR TCA 72 bp | GAACAAATGAGAAGAAGATATCATGAGACACTGGTATaGAAATGTCATGATGAACCCTCTTTGTGTGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: EQMRRRYHETLV*KCHDEPSLCAN Trigger: GTTAGCACACAAAGAGGGTTCATCATGACATTTTCATACCAGTGTCTCATGATATCTTCTTCTCATTTGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR GCA 72 bp | CTGTTCAATGGAAGAAAAACCCAGACAAACTTGAGCTaGAAGGAAAAGAATCTGGAGTATCTATTCAACTAT | + |
|
Preference number: 3 (lower is better) Translates to: LFNGRKTQTNLS*KEKNLEYLFNY Trigger: ATAGTTGAATAGATACTCCAGATTCTTTTCCTTGCAGCTCAAGTTTGTCTGGGTTTTTCTTCCATTGAACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CCA 72 bp | AGTACATGTGGCTATCATCACGAATACTTTAGGTCATaGCTTTTTCTCAACTTAGAGCTTTATGTCATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: STCGYHHEYFRS*LFLNLELYVMR Trigger: TCTCATGACATAAAGCTCTAAGTTGAGAAAAAGCCATGACCTAAAGTATTCGTGATGATAGCCACATGTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CCA 72 bp | ACTATTGTACATAGGGAAATGATGAAATCTGTTCAATaGAAGAAAAACCCAGACAAACTTGAGCTGCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TIVHREMMKSVQ*KKNPDKLELQG Trigger: TCCTTGCAGCTCAAGTTTGTCTGGGTTTTTCTTCCATTGAACAGATTTCATCATTTCCCTATGTACAATAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR TCA 72 bp | ACACACAAGAAACACTATGACAAACGGGTTAAAGCTTaGGGAACAACATCAAATTTTCTATACTTCAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: THKKHYDKRVKA*GTTSNFLYFSI Trigger: AATGCTGAAGTATAGAAAATTTGATGTTGTTCCTCAAGCTTTAACCCGTTTGTCATAGTGTTTCTTGTGTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CCA 72 bp | TCCGGTCAATTATTATATGCAACATTACTGTTCCCATaGACACCCCATAGTCAATATTTTAAGACAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SGQLLYATLLFP*TPHSQYFKTKK Trigger: TTTCTTTGTCTTAAAATATTGACTATGGGGTGTCCATGGGAACAGTAATGTTGCATATAATAATTGACCGGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CAA 72 bp | CTAGTTCCCTCTAAGACACCTTTGCATGTGGATCACTaGGCAGCAGAGGCTGTACCCAACAGGCAATGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LVPSKTPLHVDH*AAEAVPNRQCL Trigger: TAAGCATTGCCTGTTGGGTACAGCCTCTGCTGCCAAGTGATCCACATGCAAAGGTGTCTTAGAGGGAACTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCCAGAATTTGGGCAGTGAACAACCAGAGGGCTCACACAGTAAGATCCTTAGCAGCAGGTATTGTTaGGCCTTTGGTTTCCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KCQNLGSEQPEGSHSKILSSRYC*AFGFQA Trigger: CGCCTGGAAACCAAAGGCCCAACAATACCTGCTGCT...AAGGATCTTACTGTGTGAGCCCTCTGGTTGTTCACTGCCCAAATTCTGGCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCCAGAATTTGGGCAGTGAACAACCAGAGGGCTCACACAGTAAGATCCTTGTCTTCATACATGTGTaGGCTGGGGTCCAGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: KCQNLGSEQPEGSHSKILVFIHV*AGVQQT Trigger: AGTCTGCTGGACCCCAGCCCACACATGTATGAAGAC...AAGGATCTTACTGTGTGAGCCCTCTGGTTGTTCACTGCCCAAATTCTGGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| CDS-3UTR GCA 90 bp | GCACAAGTAAAGGGCAGACGAAGCAGTTTTACTTTGCACATGCGGCCTCTAGAGTTTTCTCATGTCAGCTaGTTCAGAACCCAACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AQVKGRRSSFTLHMRPLEFSHVS*FRTQLP Trigger: TGGCAGTTGGGTTCTGAAGCAGCTGACATGAGAAAA...CTCTAGAGGCCGCATGTGCAAAGTAAAACTGCTTCGTCTGCCCTTTACTTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064225.14 |
||
| CDS-3UTR CCA 90 bp | GTCAGAAAGAGAAGAGTCACCCCTTCAGCATTAGCATGTCTATGTGTAAGATCCTCTGCAGTGGGGTTTTaGCATTCCTCTAGGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VRKRRVTPSALACLCVRSSAVGF*HSSRTW Trigger: CCAGGTCCTAGAGGAATGCCAAAACCCCACTGCAGA...GGATCTTACACATAGACATGCTAATGCTGAAGGGGTGACTCTTCTCTTTCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTGACAGTCAGTCACTGGCATCCATGGAACAGGGATATAATAAAGTCTACAGTCTTCATACATGTGTaGGCTGGGGTCCAGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: PVTVSHWHPWNRDIIKSTVFIHV*AGVQQT Trigger: AGTCTGCTGGACCCCAGCCCACACATGTATGAAGAC...TGTAGACTTTATTATATCCCTGTTCCATGGATGCCAGTGACTGACTGTCACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | GATAAAAATGGAGACAAGAGACCTTCCTCATTGTATTTCCCCAGCAGTCAACCTAGCAGCAGGTATTGTTaGGCCTTTGGTTTCCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: DKNGDKRPSSLYFPSSQPSSRYC*AFGFQA Trigger: CGCCTGGAAACCAAAGGCCCAACAATACCTGCTGCT...AGGTTGACTGCTGGGGAAATACAATGAGGAAGGTCTCTTGTCTCCATTTTTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTGTAACAAAAATGCCAGAATTTGGGCAGTGAACAACCAGAGGGCTCACAGACTTCATCTGCAGTaGGGTTTTGGCATTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LFCNKNARIWAVNNQRAHRLHLQ*GFGIPL Trigger: TAGAGGAATGCCAAAACCCCACTGCAGATGAAGTCT...GTGAGCCCTCTGGTTGTTCACTGCCCAAATTCTGGCATTTTTGTTACAGAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | GCACAAGTAAAGGGCAGACGAAGCAGTTTTACTTTGCACATGCGGCCTCTAGAGATTCAGAAGTACAGCTaGTGGTACTTTCCACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AQVKGRRSSFTLHMRPLEIQKYS*WYFPQK Trigger: CTTTTGTGGAAAGTACCACCAGCTGTACTTCTGAAT...CTCTAGAGGCCGCATGTGCAAAGTAAAACTGCTTCGTCTGCCCTTTACTTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| 3UTR CAA 72 bp | ATGGCAGGGACTGTGCAAATCAGCTTTGGAACCTCCTaGTACACAGGTTCCAAAGACACAGCAACTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: MAGTVQISFGTS*YTGSKDTATLK Trigger: TTTCAAAGTTGCTGTGTCTTTGGAACCTGTGTACAAGGAGGTTCCAAAGCTGATTTGCACAGTCCCTGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | AAACCACGGCCAATTTGTTGGCAATTGTTTCTAAGAGACCATATTGCACAAAAGTCTGCAGTGGGGTTTTaGCATTCCTCTAGGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPRPICWQLFLRDHIAQKSAVGF*HSSRTW Trigger: CCAGGTCCTAGAGGAATGCCAAAACCCCACTGCAGA...CTTTTGTGCAATATGGTCTCTTAGAAACAATTGCCAACAAATTGGCCGTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| CDS-3UTR GCA 90 bp | CAAATGCCTAGGTTAGAGATGAGGACTCTCTCAAGGAGCCTTATCTCTTCCATTTCATTTTGTGACTGCTaGCGTTTTCTCATGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QMPRLEMRTLSRSLISSISFCDC*RFLMSA Trigger: AGCTGACATGAGAAAACGGCAGCAGTCACAAAATGA...AATGGAAGAGATAAGGCTCCTTGAGAGAGTCCTCATCTCTAACCTAGGCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064225.14 |
||
| CDS-3UTR CCA 90 bp | TGTGACAGTCAGTCACTGGCATCCATGGAACAGGGATATAATAAAGTCTACATCAGACTTCATCTGCAGTaGGGTTTTGGCATTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CDSQSLASMEQGYNKVYIRLHLQ*GFGIPL Trigger: TAGAGGAATGCCAAAACCCCACTGCAGATGAAGTCT...GATGTAGACTTTATTATATCCCTGTTCCATGGATGCCAGTGACTGACTGTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | GATAAAAATGGAGACAAGAGACCTTCCTCATTGTATTTCCCCAGCAGTCAACCTCCTCGTATATCATCCTaGCCTTTTCTTCAACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DKNGDKRPSSLYFPSSQPPRISS*PFLQQP Trigger: AGGCTGTTGAAGAAAAGGCCAGGATGATATACGAGG...AGGTTGACTGCTGGGGAAATACAATGAGGAAGGTCTCTTGTCTCCATTTTTATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | ATTGGCTTCAGAGACGGTATACTAAACACAGTATGTAGCATGGTTAAATATCACGTCTTCATACATGTGTaGGCTGGGGTCCAGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: IGFRDGILNTVCSMVKYHVFIHV*AGVQQT Trigger: AGTCTGCTGGACCCCAGCCCACACATGTATGAAGAC...GTGATATTTAACCATGCTACATACTGTGTTTAGTATACCGTCTCTGAAGCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | TTTAATAGCACAAGTAAAGGGCAGACGAAGCAGTTTTACTTTGCACATGCGGCCCAGAAGTACAGCTGGTaGTACTTTCCACAAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FNSTSKGQTKQFYFAHAAQKYSW*YFPQKL Trigger: AAGCTTTTGTGGAAAGTACCACCAGCTGTACTTCTG...GGCCGCATGTGCAAAGTAAAACTGCTTCGTCTGCCCTTTACTTGTGCTATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTGTAACAAAAATGCCAGAATTTGGGCAGTGAACAACCAGAGGGCTCACATTCAGAAGTACAGCTaGTGGTACTTTCCACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFCNKNARIWAVNNQRAHIQKYS*WYFPQK Trigger: CTTTTGTGGAAAGTACCACCAGCTGTACTTCTGAAT...GTGAGCCCTCTGGTTGTTCACTGCCCAAATTCTGGCATTTTTGTTACAGAAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| 3UTR CAA 72 bp | TATATTACATTTTTCCTGGTCATGTGCACCAACTCATaGTGCCCCAAACACAGAACGAGGATGATGGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: YITFFLVMCTNS*CPKHRTRMMVH Trigger: GTGTACCATCATCCTCGTTCTGTGTTTGGGGCACAATGAGTTGGTGCACATGACCAGGAAAAATGTAATATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGACGGTATACTAAACACAGTATGTAGCATGGTTAAATATCACTGTTACAGCAGCAGGTATTGTTaGGCCTTTGGTTTCCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FRDGILNTVCSMVKYHCYSSRYC*AFGFQA Trigger: CGCCTGGAAACCAAAGGCCCAACAATACCTGCTGCT...GTAACAGTGATATTTAACCATGCTACATACTGTGTTTAGTATACCGTCTCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | TCACCGCTGTATACATCACCTACACAATCTCCTTTGCTTTCCACAATAGATATGCCTCGTATATCATCCTaGCCTTTTCTTCAACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPLYTSPTQSPLLSTIDMPRISS*PFLQQP Trigger: AGGCTGTTGAAGAAAAGGCCAGGATGATATACGAGG...CATATCTATTGTGGAAAGCAAAGGAGATTGTGTAGGTGATGTATACAGCGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGAAAGAGAAGAGTCACCCCTTCAGCATTAGCATGTCTATGTGTAAGATCCATTCAGAAGTACAGCTaGTGGTACTTTCCACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRKRRVTPSALACLCVRSIQKYS*WYFPQK Trigger: CTTTTGTGGAAAGTACCACCAGCTGTACTTCTGAAT...GGATCTTACACATAGACATGCTAATGCTGAAGGGGTGACTCTTCTCTTTCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CAA 72 bp | TACGCCACAAGTCAGATGCAATTCCTCACTATGCTTTaGACAGTGCTACATGTAGGCATTCCTTTACTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YATSQMQFLTML*TVLHVGIPLLV Trigger: AACTAGTAAAGGAATGCCTACATGTAGCACTGTCAAAAGCATAGTGAGGAATTGCATCTGACTTGTGGCGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CAA 72 bp | CAGGGAGCGATTCACCCACTAGGAATTAAATCAAACTaGACTATATCAAGTGTTGTGCTCTTGAAATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGAIHPLGIKSN*TISSVVLLKWW Trigger: CCACCATTTCAAGAGCACAACACTTGATATAGTCAAGTTTGATTTAATTCCTAGTGGGTGAATCGCTCCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CAA 72 bp | TGCCCTTTTCATGCCATCAGAGCATCGGTGCTAACTTaGGATGATGTCATAATAAGTCAGAAAGAGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CPFHAIRASVLT*DDVIISQKEKS Trigger: ACTCTTCTCTTTCTGACTTATTATGACATCATCCAAAGTTAGCACCGATGCTCTGATGGCATGAAAAGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| CDS-3UTR TCA 90 bp | TTTAATAGCACAAGTAAAGGGCAGACGAAGCAGTTTTACTTTGCACATGCGGCCAGCTTTATAGATCTGTaGGTTCAAGAATCTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FNSTSKGQTKQFYFAHAASFIDL*VQESWE Trigger: TTCCCAAGATTCTTGAACTCACAGATCTATAAAGCT...GGCCGCATGTGCAAAGTAAAACTGCTTCGTCTGCCCTTTACTTGTGCTATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| CDS-3UTR TCA 90 bp | TCACCGCTGTATACATCACCTACACAATCTCCTTTGCTTTCCACAATAGATATGAGCTTTATAGATCTGTaGGTTCAAGAATCTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPLYTSPTQSPLLSTIDMSFIDL*VQESWE Trigger: TTCCCAAGATTCTTGAACTCACAGATCTATAAAGCT...CATATCTATTGTGGAAAGCAAAGGAGATTGTGTAGGTGATGTATACAGCGGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | GTATGCTCCTTTCTAGGGACAGCATTTTATGATCATCAGAAATTTAAGAACAGAAGACTTCATCTGCAGTaGGGTTTTGGCATTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VCSFLGTAFYDHQKFKNRRLHLQ*GFGIPL Trigger: TAGAGGAATGCCAAAACCCCACTGCAGATGAAGTCT...TCTGTTCTTAAATTTCTGATGATCATAAAATGCTGTCCCTAGAAAGGAGCATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | GTATGCTCCTTTCTAGGGACAGCATTTTATGATCATCAGAAATTTAAGAACAGACCTCGTATATCATCCTaGCCTTTTCTTCAACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VCSFLGTAFYDHQKFKNRPRISS*PFLQQP Trigger: AGGCTGTTGAAGAAAAGGCCAGGATGATATACGAGG...TCTGTTCTTAAATTTCTGATGATCATAAAATGCTGTCCCTAGAAAGGAGCATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CAA 72 bp | TGCATGTGTGTGTGTGTGTGTGTGTGTGTATGGTGTTaGTCCATACCTATGCACATTTTAAAGTTTCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CMCVCVCVCVWC*SIPMHILKFQV Trigger: TACTTGAAACTTTAAAATGTGCATAGGTATGGACAAACACCATACACACACACACACACACACACACATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CAA 72 bp | GGAACACAGACTCGATGGGTCAATTTTAGTTATTATTaGGGAAAATTGCTTCCCAGACACATAGAACACATG | + |
|
Preference number: 4 (lower is better) Translates to: GTQTRWVNFSYY*GKLLPRHIEHM Trigger: CATGTGTTCTATGTGTCTGGGAAGCAATTTTCCCAAATAATAACTAAAATTGACCCATCGAGTCTGTGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGACGGTATACTAAACACAGTATGTAGCATGGTTAAATATCACTGTTACCAGAAGTACAGCTGGTaGTACTTTCCACAAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FRDGILNTVCSMVKYHCYQKYSW*YFPQKL Trigger: AAGCTTTTGTGGAAAGTACCACCAGCTGTACTTCTG...GTAACAGTGATATTTAACCATGCTACATACTGTGTTTAGTATACCGTCTCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| CDS-3UTR CCA 90 bp | GTATGCTCCTTTCTAGGGACAGCATTTTATGATCATCAGAAATTTAAGAACAGACAGAAGTACAGCTGGTaGTACTTTCCACAAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VCSFLGTAFYDHQKFKNRQKYSW*YFPQKL Trigger: AAGCTTTTGTGGAAAGTACCACCAGCTGTACTTCTG...TCTGTTCTTAAATTTCTGATGATCATAAAATGCTGTCCCTAGAAAGGAGCATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CAA 72 bp | GAACTTATTATTGTTTACCTGCTGACATTCAGAGGTTaGCATCACTCTTTTAGAACTGAGGAGCCATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELIIVYLLTFRG*HHSFRTEEPFF Trigger: AAAGAATGGCTCCTCAGTTCTAAAAGAGTGATGCAAACCTCTGAATGTCAGCAGGTAAACAATAATAAGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CAA 72 bp | AAATGCTGTGATAAAGGCACGAATCAATGGAAAACTTaGCAACAGAAGACATACGATATAAGACATGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KCCDKGTNQWKT*QQKTYDIRHEE Trigger: CTCCTCATGTCTTATATCGTATGTCTTCTGTTGCAAAGTTTTCCATTGATTCGTGCCTTTATCACAGCATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| 3UTR CAA 72 bp | ACTCGATGGGTCAATTTTAGTTATTATTTGGGAAAATaGCTTCCCAGACACATAGAACACATGAGGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TRWVNFSYYLGK*LPRHIEHMRAF Trigger: AAATGCCCTCATGTGTTCTATGTGTCTGGGAAGCAATTTTCCCAAATAATAACTAAAATTGACCCATCGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| CDS-3UTR TCA 90 bp | ATTGGCTTCAGAGACGGTATACTAAACACAGTATGTAGCATGGTTAAATATCACAGCTTTATAGATCTGTaGGTTCAAGAATCTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IGFRDGILNTVCSMVKYHSFIDL*VQESWE Trigger: TTCCCAAGATTCTTGAACTCACAGATCTATAAAGCT...GTGATATTTAACCATGCTACATACTGTGTTTAGTATACCGTCTCTGAAGCCAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| CDS-3UTR CAA 90 bp | GATAAAAATGGAGACAAGAGACCTTCCTCATTGTATTTCCCCAGCAGTCAACCTAAGCAGCAGGTATTGTaGGGCCTTTGGTTTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DKNGDKRPSSLYFPSSQPKQQVL*GLWFPG Trigger: GCCTGGAAACCAAAGGCCCAACAATACCTGCTGCTT...AGGTTGACTGCTGGGGAAATACAATGAGGAAGGTCTCTTGTCTCCATTTTTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTGGTAGGTTTTAGTGGTAAATATTTGCAATTGTGGCAAGTGGAGAATTGCAAGCAGCAGGTATTGTaGGGCCTTTGGTTTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLVGFSGKYLQLWQVENCKQQVL*GLWFPG Trigger: GCCTGGAAACCAAAGGCCCAACAATACCTGCTGCTT...GCAATTCTCCACTTGCCACAATTGCAAATATTTACCACTAAAACCTACCAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064225.14 ENSMUST00000131996.8 |
||
| CDS-3UTR CAA 90 bp | AAACCACGGCCAATTTGTTGGCAATTGTTTCTAAGAGACCATATTGCACAAAAGAAGCAGCAGGTATTGTaGGGCCTTTGGTTTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KPRPICWQLFLRDHIAQKKQQVL*GLWFPG Trigger: GCCTGGAAACCAAAGGCCCAACAATACCTGCTGCTT...CTTTTGTGCAATATGGTCTCTTAGAAACAATTGCCAACAAATTGGCCGTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064225.14 ENSMUST00000117676.8 ENSMUST00000131996.8 |
||