Pregenerated sensors for RGS14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052087Ensembl transcript IDs: ENSMUST00000063771.14, ENSMUST00000149858.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGACCCGTGGCATGCTTGGTTTGCCCAGGCACCATGCAGATAGCCTaGATTGTTACACAGATGCCAGAGGACCGGGTGGGTGGTGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: RPVACLVCPGTMQIA*IVTQMPEDRVGGGV Trigger: GACTCCACCACCCACCCGGTCCTCTGGCATCTGTGTAACAATCCAGGCTATCTGCATGGTGCCTGGGCAAACCAAGCATGCCACGGGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR GCA 90 bp | ATAAAATCCATATGTACAGTAGAGTCTGTGGATGGAGGGAGGGGTTaGTCACCAGTACACCCAGGTCTTACTTATATCAACTCTTTAAGG | + |
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Preference number: 1 (lower is better) Translates to: IKSICTVESVDGGRG*SPVHPGLTYINSLR Trigger: CCTTAAAGAGTTGATATAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCATCCACAGACTCTACTGTACATATGGATTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR GCA 90 bp | TATTATTATTATATAACAGTACCATATATCCAGGACAAACCCAGCTaGCCCAAGCCAACCATAAAATCCATATGTACAGTAGAGTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: YYYYITVPYIQDKPS*PKPTIKSICTVESV Trigger: CACAGACTCTACTGTACATATGGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATATGGTACTGTTATATAATAATAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR-3UTR CCA 90 bp | TGTCCGGGCTCCCGAGGTGTGAGGAGCCAGGTTCCCGCAGGGGGCGTCCCTCGGGCCAGCAGGCACTCTTaGTACAGCGGGGATTTGACG | + |
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Preference number: 2 (lower is better) Translates to: CPGSRGVRSQVPAGGVPRASRHS*YSGDLT Trigger: CGTCAAATCCCCGCTGTACCAAGAGTGCCTGCTGGC...CCGAGGGACGCCCCCTGCGGGAACCTGGCTCCTCACACCTCGGGAGCCCGGACA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149858.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCCAGGCACCATGCAGATAGCCTGGATTGTTACACAGATGCCAGAGGACCGGTGGGTGGTGGAGTCTaGAGGGCCCTCCCTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LPRHHADSLDCYTDARGPVGGGV*RALPGL Trigger: CAGCCCAGGGAGGGCCCTTCAGACTCCACCACCCAC...CGGTCCTCTGGCATCTGTGTAACAATCCAGGCTATCTGCATGGTGCCTGGGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR-3UTR TCA 90 bp | GGTTCCCGCAGGGGGCGTCCCTCGGCCTCCGCCAGCAGGCACTCTTGGTACAGCATCAAATTGAAGATCTaGAGCTGCTGTGCTCGGAAC | + |
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Preference number: 2 (lower is better) Translates to: GSRRGRPSASASRHSWYSIKLKI*SCCARN Trigger: GTTCCGAGCACAGCAGCTTCAGATCTTCAATTTGAT...GCTGTACCAAGAGTGCCTGCTGGCGGAGGCCGAGGGACGCCCCCTGCGGGAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149858.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTTCCCGCAGGGGGCGTCCCTCGGCCTCCGCCAGCAGGCACTCTTGGTACACGAACTTCATCAAATTaGAGATCTGAAGCTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: QVPAGGVPRPPPAGTLGTRTSSN*RSEAAV Trigger: CACAGCAGCTTCAGATCTTCAATTTGATGAAGTTCG...TGTACCAAGAGTGCCTGCTGGCGGAGGCCGAGGGACGCCCCCTGCGGGAACCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149858.2 |
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| 3UTR CAA 90 bp | ATGGTACAGATAGGGCATGCAGCACAGACCCGTGGCATGCTTGGTTaGCCCAGGCACCATGCAGATAGCCTGGATTGTTACACAGATGCC | + |
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Preference number: 2 (lower is better) Translates to: MVQIGHAAQTRGMLG*PRHHADSLDCYTDA Trigger: GGCATCTGTGTAACAATCCAGGCTATCTGCATGGTGCCTGGGCAAACCAAGCATGCCACGGGTCTGTGCTGCATGCCCTATCTGTACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR-3UTR GCA 90 bp | GATGGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCTTACTTATATCAACTCTCCAGCCCCTCCTTCCTaGCCCCTGCTAAAGCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: DGGRGCSPVHPGLTYINSPAPPS*PLLKPR Trigger: TCTAGGCTTTAGCAGGGGGCAGGAAGGAGGGGCTGG...AGAGTTGATATAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR-3UTR CCA 90 bp | ACCATATATCCAGGACAAACCCAGCTGCCCCAAGCCAACCATAAAATCCATATGGACCCGTGGCATGCTTaGTTTGCCCAGGCACCATGC | + |
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Preference number: 2 (lower is better) Translates to: TIYPGQTQLPQANHKIHMDPWHA*FAQAPC Trigger: GCATGGTGCCTGGGCAAACCAAGCATGCCACGGGTC...CATATGGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCTTACTTATATCAACTCTTTAAGCCTAGAACAAGTTaGGGAGGCTGGCACTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: WREGLLTSTPRSYLYQLFKPRTS*GGWHCQ Trigger: TTGGCAGTGCCAGCCTCCTCAACTTGTTCTAGGCTT...AAAGAGTTGATATAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR-3UTR GCA 90 bp | CCAACCATAAAATCCATATGTACAGTAGAGTCTGTGGATGGAGGGAGGGGTTGCTGTTCACTATGCTTATaGCAAGGAACTAGGCCCACC | + |
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Preference number: 2 (lower is better) Translates to: PTIKSICTVESVDGGRGCCSLCL*QGTRPT Trigger: GGTGGGCCTAGTTCCTTGGCATAAGCATAGTGAACA...GCAACCCCTCCCTCCATCCACAGACTCTACTGTACATATGGATTTTATGGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR CAA 90 bp | CATAAAATCCATATGTACAGTAGAGTCTGTGGATGGAGGGAGGGGTaGCTCACCAGTACACCCAGGTCTTACTTATATCAACTCTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: HKIHMYSRVCGWREG*LTSTPRSYLYQLFK Trigger: CTTAAAGAGTTGATATAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCATCCACAGACTCTACTGTACATATGGATTTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR-3UTR GCA 90 bp | TTATTATATAACAGTACCATATATCCAGGACAAACCCAGCTGCCCCAAGCCAACCGTTTGTGTTCACTATaGTTATGCCAAGGAACTAGG | + |
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Preference number: 2 (lower is better) Translates to: LLYNSTIYPGQTQLPQANRLCSL*LCQGTR Trigger: CCTAGTTCCTTGGCATAAGCATAGTGAACACAAACG...GTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATATGGTACTGTTATATAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR CCA 72 bp | GCATGCTTGGTTTGCCCAGGCACCATGCAGATAGCCTaGATTGTTACACAGATGCCAGAGGACCGGGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: ACLVCPGTMQIA*IVTQMPEDRVG Trigger: ACCCACCCGGTCCTCTGGCATCTGTGTAACAATCCAGGCTATCTGCATGGTGCCTGGGCAAACCAAGCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR GCA 72 bp | AAAGGAGCCAAAGACACTCATGGTACAGATAGGGCATaGAGCACAGACCCGTGGCATGCTTGGTTTGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: KGAKDTHGTDRA*STDPWHAWFAQ Trigger: CTGGGCAAACCAAGCATGCCACGGGTCTGTGCTGCATGCCCTATCTGTACCATGAGTGTCTTTGGCTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR CCA 72 bp | AACCATAAAATCCATATGTACAGTAGAGTCTGTGGATaGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: NHKIHMYSRVCG*REGLLTSTPRS Trigger: AGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCATCCACAGACTCTACTGTACATATGGATTTTATGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR GCA 72 bp | ATATGTACAGTAGAGTCTGTGGATGGAGGGAGGGGTTaGTCACCAGTACACCCAGGTCTTACTTATATCAAC | + |
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Preference number: 3 (lower is better) Translates to: ICTVESVDGGRG*SPVHPGLTYIN Trigger: GTTGATATAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCATCCACAGACTCTACTGTACATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR GCA 72 bp | TATATAACAGTACCATATATCCAGGACAAACCCAGCTaGCCCAAGCCAACCATAAAATCCATATGTACAGTA | + |
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Preference number: 3 (lower is better) Translates to: YITVPYIQDKPS*PKPTIKSICTV Trigger: TACTGTACATATGGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATATGGTACTGTTATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR CCA 90 bp | CCGAGGTGTGAGGAGCCAGGTTCCCGCAGGGGGCGTCCCTCGGCCTCCGCCAGCGCTGCTTGGTGTCGCTaGCTGGGATCTGCTGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: PRCEEPGSRRGRPSASASAAWCR*LGSAGN Trigger: GTTTCCAGCAGATCCCAGCCAGCGACACCAAGCAGC...GCTGGCGGAGGCCGAGGGACGCCCCCTGCGGGAACCTGGCTCCTCACACCTCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149858.2 |
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| CDS-3UTR CCA 90 bp | TGTCCGGGCTCCCGAGGTGTGAGGAGCCAGGTTCCCGCAGGGGGCGTCCCTCGGACTGGGCTCAGCGCCTaGCTGGATAGGAACTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: CPGSRGVRSQVPAGGVPRTGLSA*LDRNSW Trigger: CCACGAGTTCCTATCCAGCCAGGCGCTGAGCCCAGT...CCGAGGGACGCCCCCTGCGGGAACCTGGCTCCTCACACCTCGGGAGCCCGGACA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149858.2 |
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| CDS-3UTR TCA 90 bp | GGGCTCCCGAGGTGTGAGGAGCCAGGTTCCCGCAGGGGGCGTCCCTCGGCCTCCAGGAACTCCTCCATCTaGGACAGCCAGAACCATGCG | + |
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Preference number: 4 (lower is better) Translates to: GLPRCEEPGSRRGRPSASRNSSI*DSQNHA Trigger: CGCATGGTTCTGGCTGTCTCAGATGGAGGAGTTCCT...GGAGGCCGAGGGACGCCCCCTGCGGGAACCTGGCTCCTCACACCTCGGGAGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149858.2 |
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| CDS-3UTR CCA 90 bp | AGCCAGGTTCCCGCAGGGGGCGTCCCTCGGCCTCCGCCAGCAGGCACTCTTGGTTCGGTCGATGTTCACTaGGCTCAGCGCCTGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SQVPAGGVPRPPPAGTLGSVDVH*AQRLAG Trigger: TCCAGCCAGGCGCTGAGCCCAGTGAACATCGACCGA...ACCAAGAGTGCCTGCTGGCGGAGGCCGAGGGACGCCCCCTGCGGGAACCTGGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149858.2 |
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| CDS-3UTR TCA 90 bp | CCGAGGTGTGAGGAGCCAGGTTCCCGCAGGGGGCGTCCCTCGGCCTCCGCCAGCTTACGTTCTCTGCGCTaGATTCCTTCTTCAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: PRCEEPGSRRGRPSASASLRSLR*IPSSGT Trigger: AGTTCCTGAAGAAGGAATTCAGCGCAGAGAACGTAA...GCTGGCGGAGGCCGAGGGACGCCCCCTGCGGGAACCTGGCTCCTCACACCTCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149858.2 |
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| CDS-3UTR CCA 90 bp | CTGAAGCTGCTGTGCTCGGAACATATCTGGCCGGGGCTGGGCCAGCACCTCCTCGAACCATGCGCCCGTTaGGGACACCCAAGTGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LKLLCSEHIWPGLGQHLLEPCAR*GHPSAW Trigger: CCAAGCACTTGGGTGTCCCCAACGGGCGCATGGTTC...GAGGAGGTGCTGGCCCAGCCCCGGCCAGATATGTTCCGAGCACAGCAGCTTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149858.2 |
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| CDS-3UTR CCA 90 bp | CTGAAGCTGCTGTGCTCGGAACATATCTGGCCGGGGCTGGGCCAGCACCTCCTCGGCTCAGCGCCTGGCTaGATAGGAACTCGTGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LKLLCSEHIWPGLGQHLLGSAPG*IGTRGR Trigger: TCTACCACGAGTTCCTATCCAGCCAGGCGCTGAGCC...GAGGAGGTGCTGGCCCAGCCCCGGCCAGATATGTTCCGAGCACAGCAGCTTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149858.2 |
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| CDS-3UTR TCA 90 bp | GAATGGGTAGGCAAACCTATGAGAGAACAGTTAGCCACCCCCTCCTGGCCCTTTCGGGCTCCCGAGGTGTaGGGAGCCAGGTTCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: EWVGKPMREQLATPSWPFRAPEV*GARFPQ Trigger: CTGCGGGAACCTGGCTCCTCACACCTCGGGAGCCCG...AAAGGGCCAGGAGGGGGTGGCTAACTGTTCTCTCATAGGTTTGCCTACCCATTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR GCA 90 bp | TGTCCGGGCTCCCGAGGTGTGAGGAGCCAGGTTCCCGCAGGGGGCGTCCCTCGGGAAAGTTACGTTCTCTaGGCTGAATTCCTTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: CPGSRGVRSQVPAGGVPRESYVL*AEFLLQ Trigger: CTGAAGAAGGAATTCAGCGCAGAGAACGTAACTTTC...CCGAGGGACGCCCCCTGCGGGAACCTGGCTCCTCACACCTCGGGAGCCCGGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149858.2 |
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| CDS-3UTR GCA 90 bp | TTACACAGATGCCAGAGGACCGGGTGGGTGGTGGAGTCTGAAGGGCCCTCCCTGTCGCACTTCCTGGTCTaGCAGCACGGTGCAATCCTG | + |
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Preference number: 4 (lower is better) Translates to: LHRCQRTGWVVESEGPSLSHFLV*QHGAIL Trigger: CAGGATTGCACCGTGCTGGCAGACCAGGAAGTGCGA...CAGGGAGGGCCCTTCAGACTCCACCACCCACCCGGTCCTCTGGCATCTGTGTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR CCA 90 bp | TTACACAGATGCCAGAGGACCGGGTGGGTGGTGGAGTCTGAAGGGCCCTCCCTGGCCAGCAGGCACTCTTaGTACAGCGGGGATTTGACG | + |
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Preference number: 4 (lower is better) Translates to: LHRCQRTGWVVESEGPSLASRHS*YSGDLT Trigger: CGTCAAATCCCCGCTGTACCAAGAGTGCCTGCTGGC...CAGGGAGGGCCCTTCAGACTCCACCACCCACCCGGTCCTCTGGCATCTGTGTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR GCA 90 bp | CAGATAGGGCATGCAGCACAGACCCGTGGCATGCTTGGTTTGCCCAGGCACCATGGCTGCAGCGCCTCTTaGAGACGCTTGGTGGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: QIGHAAQTRGMLGLPRHHGCSAS*RRLVGL Trigger: TAAGCCCACCAAGCGTCTGCAAGAGGCGCTGCAGCC...ATGGTGCCTGGGCAAACCAAGCATGCCACGGGTCTGTGCTGCATGCCCTATCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR CCA 90 bp | CTACTGGGAGGAATGGGTAGGCAAACCTATGAGAGAACAGTTAGCCACCCCCTCAGGACTGGGCCCAGCTaGCCACAGGCTGCTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LLGGMGRQTYERTVSHPLRTGPS*PQAAPR Trigger: CCGAGGAGCAGCCTGTGGCCAGCTGGGCCCAGTCCT...GAGGGGGTGGCTAACTGTTCTCTCATAGGTTTGCCTACCCATTCCTCCCAGTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR CCA 90 bp | TTACACAGATGCCAGAGGACCGGGTGGGTGGTGGAGTCTGAAGGGCCCTCCCTGCCCAGGCTTCAGCTTTaGCTTCTTCCTCGCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LHRCQRTGWVVESEGPSLPRLQL*LLPRCV Trigger: GACACAGCGAGGAAGAAGCCAAAGCTGAAGCCTGGG...CAGGGAGGGCCCTTCAGACTCCACCACCCACCCGGTCCTCTGGCATCTGTGTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR TCA 90 bp | AGAGTCTGTGGATGGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCTTACTTAGCATGTCTCGGATGGTaGGGCCAGGTCGAGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RVCGWREGLLTSTPRSYLACLGW*GQVEPG Trigger: CCCTGGCTCGACCTGGCCTCACCATCCGAGACATGC...TAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCATCCACAGACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR TCA 90 bp | AGAGTCTGTGGATGGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCTTACTTACACGCCCAGCGGCAGTaGCTTCCCAGGCTTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: RVCGWREGLLTSTPRSYLHAQRQ*LPRLQL Trigger: AAGCTGAAGCCTGGGAAGTCACTGCCGCTGGGCGTG...TAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCATCCACAGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR CCA 90 bp | CTACTGGGAGGAATGGGTAGGCAAACCTATGAGAGAACAGTTAGCCACCCCCTCAGGGCCCTCAGCGAGTaGCAGCTGCCCCAACTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LLGGMGRQTYERTVSHPLRALSE*QLPQLF Trigger: GAAGAGTTGGGGCAGCTGCCACTCGCTGAGGGCCCT...GAGGGGGTGGCTAACTGTTCTCTCATAGGTTTGCCTACCCATTCCTCCCAGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR TCA 90 bp | GAATGGGTAGGCAAACCTATGAGAGAACAGTTAGCCACCCCCTCCTGGCCCTTTAGCACGGTGCAATCCTaGTCCAGGACCAGGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: EWVGKPMREQLATPSWPFSTVQS*SRTRAF Trigger: GAAGGCCCTGGTCCTGGATCAGGATTGCACCGTGCT...AAAGGGCCAGGAGGGGGTGGCTAACTGTTCTCTCATAGGTTTGCCTACCCATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR GCA 90 bp | GATGGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCTTACTTATATCAACTCTTGGGCCCCGCTGCTCTaGACCCGATTCAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DGGRGCSPVHPGLTYINSWAPLL*TRFSSS Trigger: GGAGCTGCTGAATCGGGTGCAGAGCAGCGGGGCCCA...AGAGTTGATATAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR CCA 90 bp | AGAGTCTGTGGATGGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCTTACTTAATATCTGGCCGGGGCTaGGCCAGCACCTCCTCACTA | + |
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Preference number: 4 (lower is better) Translates to: RVCGWREGLLTSTPRSYLISGRG*ASTSSL Trigger: TAGTGAGGAGGTGCTGGCCCAGCCCCGGCCAGATAT...TAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCATCCACAGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR CCA 90 bp | AGAGTCTGTGGATGGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCTTACTTAGGGCTGCTTCTCTCCTaGCCTGTGCAGTACCACCTG | + |
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Preference number: 4 (lower is better) Translates to: RVCGWREGLLTSTPRSYLGLLLS*PVQYHL Trigger: CAGGTGGTACTGCACAGGCCAGGAGAGAAGCAGCCC...TAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCATCCACAGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR TCA 90 bp | CCTGCCCATAGCAGAAAGGAGCCAAAGACACTCATGGTACAGATAGGGCATGCACTTGGTGGGCTTAGCTaGGATCCGGACCACTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: PAHSRKEPKTLMVQIGHALGGLS*DPDHSL Trigger: GAGCGAGTGGTCCGGATCTCAGCTAAGCCCACCAAG...TGCATGCCCTATCTGTACCATGAGTGTCTTTGGCTCCTTTCTGCTATGGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR GCA 90 bp | AGAGTCTGTGGATGGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCTTACTTACTCTACGAAAGGACTTaGGGAGAGGGCGGCCACAAG | + |
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Preference number: 4 (lower is better) Translates to: RVCGWREGLLTSTPRSYLLYERT*GEGGHK Trigger: CTTGTGGCCGCCCTCTCCGCAAGTCCTTTCGTAGAG...TAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCATCCACAGACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR CCA 90 bp | AAGTTGAGGAGGCTGGCACTGCCAAAGTCACCCGTTTGTGTTCACTATGCTTATCCTCTGCCCTCACCCTaGGCCTGGGAACCTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: KLRRLALPKSPVCVHYAYPLPSP*AWEPAV Trigger: CACTGCAGGTTCCCAGGCCCAGGGTGAGGGCAGAGG...ATAAGCATAGTGAACACAAACGGGTGACTTTGGCAGTGCCAGCCTCCTCAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR CCA 90 bp | AGAGTCTGTGGATGGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCTTACTTAGGCTCAGCGCCTGGCTaGATAGGAACTCGTGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: RVCGWREGLLTSTPRSYLGSAPG*IGTRGR Trigger: TCTACCACGAGTTCCTATCCAGCCAGGCGCTGAGCC...TAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCATCCACAGACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR CCA 90 bp | TACTGGGAGGAATGGGTAGGCAAACCTATGAGAGAACAGTTAGCCACCCCCTCCCTTGGTCTGGGTTCTTaGGAGGCATCCCTGACTGCG | + |
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Preference number: 4 (lower is better) Translates to: YWEEWVGKPMREQLATPSLGLGS*EASLTA Trigger: CGCAGTCAGGGATGCCTCCCAAGAACCCAGACCAAG...GGAGGGGGTGGCTAACTGTTCTCTCATAGGTTTGCCTACCCATTCCTCCCAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS-3UTR CCA 90 bp | CTACTGGGAGGAATGGGTAGGCAAACCTATGAGAGAACAGTTAGCCACCCCCTCAGCCTCCCGAGAGCCTaGTCTTTGGGAAGGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LLGGMGRQTYERTVSHPLSLPRA*SLGRKL Trigger: CAGCTTCCTTCCCAAAGACCAGGCTCTCGGGAGGCT...GAGGGGGTGGCTAACTGTTCTCTCATAGGTTTGCCTACCCATTCCTCCCAGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| 3UTR CAA 72 bp | ATAGGGCATGCAGCACAGACCCGTGGCATGCTTGGTTaGCCCAGGCACCATGCAGATAGCCTGGATTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: IGHAAQTRGMLG*PRHHADSLDCY Trigger: GTAACAATCCAGGCTATCTGCATGGTGCCTGGGCAAACCAAGCATGCCACGGGTCTGTGCTGCATGCCCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR TCA 90 bp | TGGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCTTACTTATATCAACTCTTTGGAGGCTGTGGATGCTaGGAGAGCTGCCTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WREGLLTSTPRSYLYQLFGGCGC*ESCLCP Trigger: AGGGCAGAGGCAGCTCTCTCAGCATCCACAGCCTCC...AAAGAGTTGATATAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR TCA 90 bp | AGCAGAAAGGAGCCAAAGACACTCATGGTACAGATAGGGCATGCAGCACAGACCGGTACAGCGGGGATTTaGCGAAGCGCGCATAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRKEPKTLMVQIGHAAQTGTAGI*RSAHSC Trigger: ACAGCTATGCGCGCTTCGTCAAATCCCCGCTGTACC...GGTCTGTGCTGCATGCCCTATCTGTACCATGAGTGTCTTTGGCTCCTTTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR TCA 90 bp | AGCAGAAAGGAGCCAAAGACACTCATGGTACAGATAGGGCATGCAGCACAGACCGACGATGGGGGAAGGTaGCTGTCCTTGGTCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRKEPKTLMVQIGHAAQTDDGGR*LSLVWV Trigger: AACCCAGACCAAGGACAGTCACCTTCCCCCATCGTC...GGTCTGTGCTGCATGCCCTATCTGTACCATGAGTGTCTTTGGCTCCTTTCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR GCA 90 bp | ACAGTACCATATATCCAGGACAAACCCAGCTGCCCCAAGCCAACCATAAAATCCGATCGTGGGCCCCGCTaGTCTGCACCCGATTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVPYIQDKPSCPKPTIKSDRGPR*SAPDSA Trigger: TGCTGAATCGGGTGCAGAGCAGCGGGGCCCACGATC...GGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATATGGTACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR TCA 90 bp | CAGATAGGGCATGCAGCACAGACCCGTGGCATGCTTGGTTTGCCCAGGCACCATTTACGTTCTCTGCGCTaGATTCCTTCTTCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QIGHAAQTRGMLGLPRHHLRSLR*IPSSGT Trigger: AGTTCCTGAAGAAGGAATTCAGCGCAGAGAACGTAA...ATGGTGCCTGGGCAAACCAAGCATGCCACGGGTCTGTGCTGCATGCCCTATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR GCA 90 bp | CCAACCATAAAATCCATATGTACAGTAGAGTCTGTGGATGGAGGGAGGGGTTGCCTGGGCCTGGGAACCTaGAGTGCTGGTCAGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTIKSICTVESVDGGRGCLGLGT*SAGQFS Trigger: GGAGAACTGACCAGCACTGCAGGTTCCCAGGCCCAG...GCAACCCCTCCCTCCATCCACAGACTCTACTGTACATATGGATTTTATGGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCTTACTTATATCAACTCTTTACTGGGCTCAGCGCCTaGCTGGATAGGAACTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WREGLLTSTPRSYLYQLFTGLSA*LDRNSW Trigger: CCACGAGTTCCTATCCAGCCAGGCGCTGAGCCCAGT...AAAGAGTTGATATAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCTTACTTATATCAACTCTTTTCGGTCGATGTTCACTaGGCTCAGCGCCTGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WREGLLTSTPRSYLYQLFSVDVH*AQRLAG Trigger: TCCAGCCAGGCGCTGAGCCCAGTGAACATCGACCGA...AAAGAGTTGATATAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CCA 90 bp | AGAGTCTGTGGATGGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCTTACTTACCGACCAACTCCAGCTaGAAGGTGATCCTGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVCGWREGLLTSTPRSYLPTNSS*KVILFS Trigger: GGAAAACAGGATCACCTTCCAGCTGGAGTTGGTCGG...TAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCATCCACAGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CCA 90 bp | CTACTGGGAGGAATGGGTAGGCAAACCTATGAGAGAACAGTTAGCCACCCCCTCGATTCTCCAAATCCATaGGCTGCTTCTCTCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLGGMGRQTYERTVSHPLDSPNP*AASLLA Trigger: GGCCAGGAGAGAAGCAGCCCATGGATTTGGAGAATC...GAGGGGGTGGCTAACTGTTCTCTCATAGGTTTGCCTACCCATTCCTCCCAGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| 3UTR CAA 72 bp | CAAGTTGAGGAGGCTGGCACTGCCAAAGTCACCCGTTaGTGTTCACTATGCTTATGCCAAGGAACTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVEEAGTAKVTR*CSLCLCQGTRP Trigger: GGGCCTAGTTCCTTGGCATAAGCATAGTGAACACAAACGGGTGACTTTGGCAGTGCCAGCCTCCTCAACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR GCA 90 bp | CCTGCCCATAGCAGAAAGGAGCCAAAGACACTCATGGTACAGATAGGGCATGCACTTCTCACAGATGCCTaGCAGCATGTCTCGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAHSRKEPKTLMVQIGHALLTDA*QHVSDG Trigger: ACCATCCGAGACATGCTGGCAGGCATCTGTGAGAAG...TGCATGCCCTATCTGTACCATGAGTGTCTTTGGCTCCTTTCTGCTATGGGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CCA 90 bp | ACAGTACCATATATCCAGGACAAACCCAGCTGCCCCAAGCCAACCATAAAATCCGCTGCTTGGTGTCGCTaGCTGGGATCTGCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVPYIQDKPSCPKPTIKSAAWCR*LGSAGN Trigger: GTTTCCAGCAGATCCCAGCCAGCGACACCAAGCAGC...GGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATATGGTACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CCA 90 bp | ACAGTACCATATATCCAGGACAAACCCAGCTGCCCCAAGCCAACCATAAAATCCTCCAGTCGCACTTCCTaGTCTGCCAGCACGGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TVPYIQDKPSCPKPTIKSSSRTS*SASTVQ Trigger: TTGCACCGTGCTGGCAGACCAGGAAGTGCGACTGGA...GGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATATGGTACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CCA 90 bp | CCTGCCCATAGCAGAAAGGAGCCAAAGACACTCATGGTACAGATAGGGCATGCACTTCTACCAGCAAACTaGAGGACGATGGGGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAHSRKEPKTLMVQIGHALLPAN*RTMGEG Trigger: ACCTTCCCCCATCGTCCTCCAGTTTGCTGGTAGAAG...TGCATGCCCTATCTGTACCATGAGTGTCTTTGGCTCCTTTCTGCTATGGGCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CCA 90 bp | CATGCAGATAGCCTGGATTGTTACACAGATGCCAGAGGACCGGGTGGGTGGTGGAAGCTGCAGAAATTCTaGAAGGACCAGGTCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HADSLDCYTDARGPGGWWKLQKF*KDQVLF Trigger: AAAGAGGACCTGGTCCTTCCAGAATTTCTGCAGCTT...CCACCACCCACCCGGTCCTCTGGCATCTGTGTAACAATCCAGGCTATCTGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CCA 90 bp | ATGGGTAGGCAAACCTATGAGAGAACAGTTAGCCACCCCCTCCTGGCCCTTTCTCGAGAGCCTGGTCTTTaGGAAGGAAGCTGCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MGRQTYERTVSHPLLALSREPGL*EGSCRN Trigger: ATTTCTGCAGCTTCCTTCCCAAAGACCAGGCTCTCG...AGAAAGGGCCAGGAGGGGGTGGCTAACTGTTCTCTCATAGGTTTGCCTACCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR TCA 90 bp | TTATTATATAACAGTACCATATATCCAGGACAAACCCAGCTGCCCCAAGCCAACCGAAGAAGTCCTCTCTaGTCGTGGGCCCCGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLYNSTIYPGQTQLPQANRRSPL*SWAPLL Trigger: GAGCAGCGGGGCCCACGATCAGAGAGGACTTCTTCG...GTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATATGGTACTGTTATATAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CCA 90 bp | ATATATCCAGGACAAACCCAGCTGCCCCAAGCCAACCATAAAATCCATATGTACGAACCATGCGCCCGTTaGGGACACCCAAGTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IYPGQTQLPQANHKIHMYEPCAR*GHPSAW Trigger: CCAAGCACTTGGGTGTCCCCAACGGGCGCATGGTTC...GTACATATGGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR GCA 90 bp | CCAACCATAAAATCCATATGTACAGTAGAGTCTGTGGATGGAGGGAGGGGTTGCCTCTCTTCTCACAGATaGCTGCCAGCATGTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PTIKSICTVESVDGGRGCLSSHR*LPACLG Trigger: TCCGAGACATGCTGGCAGGCATCTGTGAGAAGAGAG...GCAACCCCTCCCTCCATCCACAGACTCTACTGTACATATGGATTTTATGGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR GCA 90 bp | ATATATCCAGGACAAACCCAGCTGCCCCAAGCCAACCATAAAATCCATATGTACGGTCTGCCAGCACGGTaGAATCCTGATCCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: IYPGQTQLPQANHKIHMYGLPAR*NPDPGP Trigger: TGGTCCTGGATCAGGATTGCACCGTGCTGGCAGACC...GTACATATGGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCTTACTTATATCAACTCTTTGGGAACCTGCAGTGCTaGTCAGTTCTCCATCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WREGLLTSTPRSYLYQLFGNLQC*SVLHLR Trigger: TCTCAGATGGAGAACTGACCAGCACTGCAGGTTCCC...AAAGAGTTGATATAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CCA 90 bp | ACAGTACCATATATCCAGGACAAACCCAGCTGCCCCAAGCCAACCATAAAATCCAACCCAGGTCCAGACTaGCAGAAGAATTCAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TVPYIQDKPSCPKPTIKSNPGPD*QKNSGT Trigger: GGTCCCTGAATTCTTCTGCCAGTCTGGACCTGGGTT...GGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATATGGTACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR TCA 90 bp | ATATATCCAGGACAAACCCAGCTGCCCCAAGCCAACCATAAAATCCATATGTACCCAAGGCTCTTCCGGTaGCTCTCAGATTTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IYPGQTQLPQANHKIHMYPRLFR*LSDLLL Trigger: GAGCAGCAAATCTGAGAGTCACCGGAAGAGCCTTGG...GTACATATGGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR GCA 90 bp | AGAGTCTGTGGATGGAGGGAGGGGTTGCTCACCAGTACACCCAGGTCTTACTTAGAAAGTTACGTTCTCTaGGCTGAATTCCTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVCGWREGLLTSTPRSYLESYVL*AEFLLQ Trigger: CTGAAGAAGGAATTCAGCGCAGAGAACGTAACTTTC...TAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCATCCACAGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR GCA 90 bp | CCAACCATAAAATCCATATGTACAGTAGAGTCTGTGGATGGAGGGAGGGGTTGCGGACCAGGTCCTCTTTaGGAAGAAGTCCTCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PTIKSICTVESVDGGRGCGPGPL*EEVLSD Trigger: ATCAGAGAGGACTTCTTCGCAAAGAGGACCTGGTCC...GCAACCCCTCCCTCCATCCACAGACTCTACTGTACATATGGATTTTATGGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CCA 90 bp | ACAGTACCATATATCCAGGACAAACCCAGCTGCCCCAAGCCAACCATAAAATCCAGGGGGATATGCTTCTaGCTTCACTCATCTTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVPYIQDKPSCPKPTIKSRGICF*LHSSLH Trigger: ATGCAAAGATGAGTGAAGCCAGAAGCATATCCCCCT...GGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATATGGTACTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| 3UTR CAA 72 bp | CATATGTACAGTAGAGTCTGTGGATGGAGGGAGGGGTaGCTCACCAGTACACCCAGGTCTTACTTATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: HMYSRVCGWREG*LTSTPRSYLYQ Trigger: TTGATATAAGTAAGACCTGGGTGTACTGGTGAGCAACCCCTCCCTCCATCCACAGACTCTACTGTACATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR GCA 90 bp | TATCCAGGACAAACCCAGCTGCCCCAAGCCAACCATAAAATCCATATGTACAGTGACTCTCAGATTTGCTaGTCACAAAGGCAAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: YPGQTQLPQANHKIHMYSDSQIC*SQRQGN Trigger: GTTTCCTTGCCTTTGTGAGCAGCAAATCTGAGAGTC...ACTGTACATATGGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR TCA 90 bp | TATTATATAACAGTACCATATATCCAGGACAAACCCAGCTGCCCCAAGCCAACCATCAAATTGAAGATCTaGAGCTGCTGTGCTCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YYITVPYIQDKPSCPKPTIKLKI*SCCARN Trigger: GTTCCGAGCACAGCAGCTTCAGATCTTCAATTTGAT...GGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATATGGTACTGTTATATAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR TCA 90 bp | ATATATCCAGGACAAACCCAGCTGCCCCAAGCCAACCATAAAATCCATATGTACCGAACTTCATCAAATTaGAGATCTGAAGCTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IYPGQTQLPQANHKIHMYRTSSN*RSEAAV Trigger: CACAGCAGCTTCAGATCTTCAATTTGATGAAGTTCG...GTACATATGGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CAA 90 bp | CCGAGGTGTGAGGAGCCAGGTTCCCGCAGGGGGCGTCCCTCGGCCTCCGCCAGCAGAACCATGCGCCCGTaGGGGACACCCAAGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PRCEEPGSRRGRPSASASRTMRP*GTPKCL Trigger: CAAGCACTTGGGTGTCCCCAACGGGCGCATGGTTCT...GCTGGCGGAGGCCGAGGGACGCCCCCTGCGGGAACCTGGCTCCTCACACCTCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149858.2 |
||
| CDS TCA 90 bp | CTTCAGCTTTGGCTTCTTCCTCGCTGTGTCCGGGCTCCCGAGGTGTaGGGAGCCAGGTTCCCGCAGGGGGCGTCCCTCGGCCTCCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQLWLLPRCVRAPEV*GARFPQGASLGLRQ Trigger: CTGGCGGAGGCCGAGGGACGCCCCCTGCGGGAACCTGGCTCCTCACACCTCGGGAGCCCGGACACAGCGAGGAAGAAGCCAAAGCTGAAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 90 bp | GACTTGCGGAGAGGGCGGCCACAAGGGCCCTCAGCGAGTGGCAGCTaGCCCAACTCTTCCACGCCCAGCGGCAGTGACTTCCCAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DLRRGRPQGPSASGS*PNSSTPSGSDFPGF Trigger: GAAGCCTGGGAAGTCACTGCCGCTGGGCGTGGAAGAGTTGGGGCAGCTGCCACTCGCTGAGGGCCCTTGTGGCCGCCCTCTCCGCAAGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS TCA 90 bp | CAGGATGGGCTGCAGCGCCTCTTGCAGACGCTTGGTGGGCTTAGCTaGGATCCGGACCACTCGCTCCAGGCCGACCAACTCCAGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QDGLQRLLQTLGGLS*DPDHSLQADQLQLE Trigger: TTCCAGCTGGAGTTGGTCGGCCTGGAGCGAGTGGTCCGGATCTCAGCTAAGCCCACCAAGCGTCTGCAAGAGGCGCTGCAGCCCATCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 90 bp | GGGCCGAATTCATGGCTCCACCTGTCATCTCTCTACGAAAGGACTTaGGGAGAGGGCGGCCACAAGGGCCCTCAGCGAGTGGCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GPNSWLHLSSLYERT*GEGGHKGPQRVAAA Trigger: GGCAGCTGCCACTCGCTGAGGGCCCTTGTGGCCGCCCTCTCCGCAAGTCCTTTCGTAGAGAGATGACAGGTGGAGCCATGAATTCGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 90 bp | TTCTCTCCTGGCCTGTGCAGTACCACCTGGTCCAGGCTCAGGCCATaGTTAGCCAGGATGGGCTGCAGCGCCTCTTGCAGACGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSPGLCSTTWSRLRP*LARMGCSASCRRLV Trigger: CACCAAGCGTCTGCAAGAGGCGCTGCAGCCCATCCTGGCTAAGCATGGCCTGAGCCTGGACCAGGTGGTACTGCACAGGCCAGGAGAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS TCA 90 bp | AGATCCGGACCACTCGCTCCAGGCCGACCAACTCCAGCTGGAAGGTaGTCCTGTTTTCCAGTCGCACTTCCTGGTCTGCCAGCACGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSGPLAPGRPTPAGR*SCFPVALPGLPARC Trigger: GCACCGTGCTGGCAGACCAGGAAGTGCGACTGGAAAACAGGATCACCTTCCAGCTGGAGTTGGTCGGCCTGGAGCGAGTGGTCCGGATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 90 bp | CCAGGTCCTCTTTGCGAAGAAGTCCTCTCTGATCGTGGGCCCCGCTaGTCTGCACCCGATTCAGCAGCTCCACCAGGCCTTCAATGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PGPLCEEVLSDRGPR*SAPDSAAPPGLQCH Trigger: GTGACATTGAAGGCCTGGTGGAGCTGCTGAATCGGGTGCAGAGCAGCGGGGCCCACGATCAGAGAGGACTTCTTCGCAAAGAGGACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 90 bp | GACCTTAATGTCAGGCAGAGAGAGGCCTCTCTTCTCACAGATGCCTaGCAGCATGTCTCGGATGGTGAGGCCAGGTCGAGCCAGGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: DLNVRQREASLLTDA*QHVSDGEARSSQGQ Trigger: TTGGCCCTGGCTCGACCTGGCCTCACCATCCGAGACATGCTGGCAGGCATCTGTGAGAAGAGAGGCCTCTCTCTGCCTGACATTAAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 90 bp | GTCTGTGAGGCCACTGAGCTCACTGGATTCTCCAAATCCATGGGCTaGTTCTCTCCTGGCCTGTGCAGTACCACCTGGTCCAGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCEATELTGFSKSMG*FSPGLCSTTWSRLR Trigger: CCTGAGCCTGGACCAGGTGGTACTGCACAGGCCAGGAGAGAAGCAGCCCATGGATTTGGAGAATCCAGTGAGCTCAGTGGCCTCACAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CCA 90 bp | TTAGCTGAGATCCGGACCACTCGCTCCAGGCCGACCAACTCCAGCTaGAAGGTGATCCTGTTTTCCAGTCGCACTTCCTGGTCTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LAEIRTTRSRPTNSS*KVILFSSRTSWSAS Trigger: GCTGGCAGACCAGGAAGTGCGACTGGAAAACAGGATCACCTTCCAGCTGGAGTTGGTCGGCCTGGAGCGAGTGGTCCGGATCTCAGCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CCA 90 bp | CCAGTGTCTGTGAGGCCACTGAGCTCACTGGATTCTCCAAATCCATaGGCTGCTTCTCTCCTGGCCTGTGCAGTACCACCTGGTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PVSVRPLSSLDSPNP*AASLLACAVPPGPG Trigger: GCCTGGACCAGGTGGTACTGCACAGGCCAGGAGAGAAGCAGCCCATGGATTTGGAGAATCCAGTGAGCTCAGTGGCCTCACAGACACTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CCA 90 bp | CTTCTACCAGCAAACTGGAGGACGATGGGGGAAGGTGACTGTCCTTaGTCTGGGTTCTTGGGAGGCATCCCTGACTGCGGCAGGGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LLPANWRTMGEGDCP*SGFLGGIPDCGRGI Trigger: TATCCCCCTGCCGCAGTCAGGGATGCCTCCCAAGAACCCAGACCAAGGACAGTCACCTTCCCCCATCGTCCTCCAGTTTGCTGGTAGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS TCA 90 bp | AGAAATTCTGGAAGGACCAGGTCCTCTTTGCGAAGAAGTCCTCTCTaGTCGTGGGCCCCGCTGCTCTGCACCCGATTCAGCAGCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RNSGRTRSSLRRSPL*SWAPLLCTRFSSST Trigger: GGTGGAGCTGCTGAATCGGGTGCAGAGCAGCGGGGCCCACGATCAGAGAGGACTTCTTCGCAAAGAGGACCTGGTCCTTCCAGAATTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 90 bp | CTCCAGCTGGAAGGTGATCCTGTTTTCCAGTCGCACTTCCTGGTCTaGCAGCACGGTGCAATCCTGATCCAGGACCAGGGCCTTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQLEGDPVFQSHFLV*QHGAILIQDQGLLF Trigger: GAACAGAAGGCCCTGGTCCTGGATCAGGATTGCACCGTGCTGGCAGACCAGGAAGTGCGACTGGAAAACAGGATCACCTTCCAGCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CAA 90 bp | CTTGGTTTGCCCAGGCACCATGCAGATAGCCTGGATTGTTACACAGATGCCAGAGGGCTGCAGCGCCTCTaGCAGACGCTTGGTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGLPRHHADSLDCYTDARGLQRL*QTLGGL Trigger: AAGCCCACCAAGCGTCTGCAAGAGGCGCTGCAGCCC...TCTGGCATCTGTGTAACAATCCAGGCTATCTGCATGGTGCCTGGGCAAACCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS TCA 90 bp | GCAAGGAAACCCAGGTCCAGACTGGCAGAAGAATTCAGGGACCCTTaGGACTCTCGTCGCAGGGCCGAATTCATGGCTCCACCTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: ARKPRSRLAEEFRDP*DSRRRAEFMAPPVI Trigger: GATGACAGGTGGAGCCATGAATTCGGCCCTGCGACGAGAGTCTCAAGGGTCCCTGAATTCTTCTGCCAGTCTGGACCTGGGTTTCCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CCA 90 bp | CTTCATCAAATTGAAGATCTGAAGCTGCTGTGCTCGGAACATATCTaGCCGGGGCTGGGCCAGCACCTCCTCACTAAGCCAGGCCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LHQIEDLKLLCSEHI*PGLGQHLLTKPGLS Trigger: CGACAGGCCTGGCTTAGTGAGGAGGTGCTGGCCCAGCCCCGGCCAGATATGTTCCGAGCACAGCAGCTTCAGATCTTCAATTTGATGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CAA 90 bp | TTGCCCAGGCACCATGCAGATAGCCTGGATTGTTACACAGATGCCAGAGGACCGGCCTCTTGCAGACGCTaGGTGGGCTTAGCTGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LPRHHADSLDCYTDARGPASCRR*VGLAEI Trigger: GATCTCAGCTAAGCCCACCAAGCGTCTGCAAGAGGC...CGGTCCTCTGGCATCTGTGTAACAATCCAGGCTATCTGCATGGTGCCTGGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CCA 90 bp | TCTCAGATTTGCTGCTCACAAAGGCAAGGAAACCCAGGTCCAGACTaGCAGAAGAATTCAGGGACCCTTGAGACTCTCGTCGCAGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SQICCSQRQGNPGPD*QKNSGTLETLVAGP Trigger: CGGCCCTGCGACGAGAGTCTCAAGGGTCCCTGAATTCTTCTGCCAGTCTGGACCTGGGTTTCCTTGCCTTTGTGAGCAGCAAATCTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CCA 90 bp | AGCCTCCCGAGAGCCTGGTCTTTGGGAAGGAAGCTGCAGAAATTCTaGAAGGACCAGGTCCTCTTTGCGAAGAAGTCCTCTCTGATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLPRAWSLGRKLQKF*KDQVLFAKKSSLIV Trigger: CACGATCAGAGAGGACTTCTTCGCAAAGAGGACCTGGTCCTTCCAGAATTTCTGCAGCTTCCTTCCCAAAGACCAGGCTCTCGGGAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CAA 90 bp | CTTGGTTTGCCCAGGCACCATGCAGATAGCCTGGATTGTTACACAGATGCCAGAAGAATTCAGGGACCCTaGAGACTCTCGTCGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGLPRHHADSLDCYTDARRIQGP*RLSSQG Trigger: GCCCTGCGACGAGAGTCTCAAGGGTCCCTGAATTCT...TCTGGCATCTGTGTAACAATCCAGGCTATCTGCATGGTGCCTGGGCAAACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 90 bp | CACTCTCTCCACTTCCAAGGCTCTTCCGGTGACTCTCAGATTTGCTaGTCACAAAGGCAAGGAAACCCAGGTCCAGACTGGCAGAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HSLHFQGSSGDSQIC*SQRQGNPGPDWQKN Trigger: ATTCTTCTGCCAGTCTGGACCTGGGTTTCCTTGCCTTTGTGAGCAGCAAATCTGAGAGTCACCGGAAGAGCCTTGGAAGTGGAGAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CAA 90 bp | ATCCAGGACAAACCCAGCTGCCCCAAGCCAACCATAAAATCCATATGTACAGTAAGAACCATGCGCCCGTaGGGGACACCCAAGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IQDKPSCPKPTIKSICTVRTMRP*GTPKCL Trigger: CAAGCACTTGGGTGTCCCCAACGGGCGCATGGTTCT...TACTGTACATATGGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CAA 90 bp | ACCATATATCCAGGACAAACCCAGCTGCCCCAAGCCAACCATAAAATCCATATGCGCCAGCAGGCACTCTaGGTACAGCGGGGATTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TIYPGQTQLPQANHKIHMRQQAL*VQRGFD Trigger: GTCAAATCCCCGCTGTACCAAGAGTGCCTGCTGGCG...CATATGGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CAA 90 bp | TATCCAGGACAAACCCAGCTGCCCCAAGCCAACCATAAAATCCATATGTACAGTTCTCTACGAAAGGACTaGCGGAGAGGGCGGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: YPGQTQLPQANHKIHMYSSLRKD*RRGRPQ Trigger: TTGTGGCCGCCCTCTCCGCAAGTCCTTTCGTAGAGA...ACTGTACATATGGATTTTATGGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 90 bp | GATCTGCTGGAAACGTTCGCAGGCTTTCCAGAAAGTTACGTTCTCTaGGCTGAATTCCTTCTTCAGGAACTCAGTGAAGTAAGCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: DLLETFAGFPESYVL*AEFLLQELSEVSQT Trigger: GGTCTGGCTTACTTCACTGAGTTCCTGAAGAAGGAATTCAGCGCAGAGAACGTAACTTTCTGGAAAGCCTGCGAACGTTTCCAGCAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS-3UTR CAA 90 bp | TATTATATAACAGTACCATATATCCAGGACAAACCCAGCTGCCCCAAGCCAACCTCCCAGGCTTCAGCTTaGGCTTCTTCCTCGCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: YYITVPYIQDKPSCPKPTSQASA*ASSSLC Trigger: ACACAGCGAGGAAGAAGCCAAAGCTGAAGCCTGGGA...GGTTGGCTTGGGGCAGCTGGGTTTGTCCTGGATATATGGTACTGTTATATAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS TCA 72 bp | TGGCTTCTTCCTCGCTGTGTCCGGGCTCCCGAGGTGTaGGGAGCCAGGTTCCCGCAGGGGGCGTCCCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: WLLPRCVRAPEV*GARFPQGASLG Trigger: GCCGAGGGACGCCCCCTGCGGGAACCTGGCTCCTCACACCTCGGGAGCCCGGACACAGCGAGGAAGAAGCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CCA 72 bp | CTTGCGGAGAGGGCGGCCACAAGGGCCCTCAGCGAGTaGCAGCTGCCCCAACTCTTCCACGCCCAGCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LAERAATRALSE*QLPQLFHAQRQ Trigger: CTGCCGCTGGGCGTGGAAGAGTTGGGGCAGCTGCCACTCGCTGAGGGCCCTTGTGGCCGCCCTCTCCGCAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CAA 90 bp | AGGCCATGCTTAGCCAGGATGGGCTGCAGCGCCTCTTGCAGACGCTaGGTGGGCTTAGCTGAGATCCGGACCACTCGCTCCAGGCCGACC | + |
|
Preference number: 6 (lower is better) Translates to: RPCLARMGCSASCRR*VGLAEIRTTRSRPT Trigger: GGTCGGCCTGGAGCGAGTGGTCCGGATCTCAGCTAAGCCCACCAAGCGTCTGCAAGAGGCGCTGCAGCCCATCCTGGCTAAGCATGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS TCA 72 bp | CTGCAGCGCCTCTTGCAGACGCTTGGTGGGCTTAGCTaGGATCCGGACCACTCGCTCCAGGCCGACCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: LQRLLQTLGGLS*DPDHSLQADQL Trigger: GAGTTGGTCGGCCTGGAGCGAGTGGTCCGGATCTCAGCTAAGCCCACCAAGCGTCTGCAAGAGGCGCTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CAA 90 bp | CCAACTCTTCCACGCCCAGCGGCAGTGACTTCCCAGGCTTCAGCTTaGGCTTCTTCCTCGCTGTGTCCGGGCTCCCGAGGTGTGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PTLPRPAAVTSQASA*ASSSLCPGSRGVRS Trigger: GCTCCTCACACCTCGGGAGCCCGGACACAGCGAGGAAGAAGCCAAAGCTGAAGCCTGGGAAGTCACTGCCGCTGGGCGTGGAAGAGTTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CAA 90 bp | AGGGCCGAATTCATGGCTCCACCTGTCATCTCTCTACGAAAGGACTaGCGGAGAGGGCGGCCACAAGGGCCCTCAGCGAGTGGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RAEFMAPPVISLRKD*RRGRPQGPSASGSC Trigger: GCAGCTGCCACTCGCTGAGGGCCCTTGTGGCCGCCCTCTCCGCAAGTCCTTTCGTAGAGAGATGACAGGTGGAGCCATGAATTCGGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS TCA 72 bp | GGCCTGGGAACCTGCAGTGCTGGTCAGTTCTCCATCTaGGACAGCCAGAACCATGCGCCCGTTGGGGACACC | + |
|
Preference number: 6 (lower is better) Translates to: GLGTCSAGQFSI*DSQNHAPVGDT Trigger: GGTGTCCCCAACGGGCGCATGGTTCTGGCTGTCTCAGATGGAGAACTGACCAGCACTGCAGGTTCCCAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS TCA 72 bp | GGAAGGACCAGGTCCTCTTTGCGAAGAAGTCCTCTCTaGTCGTGGGCCCCGCTGCTCTGCACCCGATTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRTRSSLRRSPL*SWAPLLCTRFS Trigger: GCTGAATCGGGTGCAGAGCAGCGGGGCCCACGATCAGAGAGGACTTCTTCGCAAAGAGGACCTGGTCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 72 bp | TCATGGCTCCACCTGTCATCTCTCTACGAAAGGACTTaGGGAGAGGGCGGCCACAAGGGCCCTCAGCGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SWLHLSSLYERT*GEGGHKGPQRV Trigger: CACTCGCTGAGGGCCCTTGTGGCCGCCCTCTCCGCAAGTCCTTTCGTAGAGAGATGACAGGTGGAGCCATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CCA 72 bp | GCAAACTGGAGGACGATGGGGGAAGGTGACTGTCCTTaGTCTGGGTTCTTGGGAGGCATCCCTGACTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: ANWRTMGEGDCP*SGFLGGIPDCG Trigger: GCCGCAGTCAGGGATGCCTCCCAAGAACCCAGACCAAGGACAGTCACCTTCCCCCATCGTCCTCCAGTTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CAA 72 bp | ACGATGGGGGAAGGTGACTGTCCTTGGTCTGGGTTCTaGGGAGGCATCCCTGACTGCGGCAGGGGGATATGC | + |
|
Preference number: 6 (lower is better) Translates to: TMGEGDCPWSGF*GGIPDCGRGIC Trigger: GCATATCCCCCTGCCGCAGTCAGGGATGCCTCCCAAGAACCCAGACCAAGGACAGTCACCTTCCCCCATCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS TCA 72 bp | AGTCGCACTTCCTGGTCTGCCAGCACGGTGCAATCCTaGTCCAGGACCAGGGCCTTCTGTTCATTGCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SRTSWSASTVQS*SRTRAFCSLPT Trigger: GGTGGGCAATGAACAGAAGGCCCTGGTCCTGGATCAGGATTGCACCGTGCTGGCAGACCAGGAAGTGCGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS TCA 72 bp | CCACTCGCTCCAGGCCGACCAACTCCAGCTGGAAGGTaGTCCTGTTTTCCAGTCGCACTTCCTGGTCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PLAPGRPTPAGR*SCFPVALPGLP Trigger: TGGCAGACCAGGAAGTGCGACTGGAAAACAGGATCACCTTCCAGCTGGAGTTGGTCGGCCTGGAGCGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CCA 72 bp | TGTTGTGGGCCTCCTGAGCTAGCTGCTTGGTGTCGCTaGCTGGGATCTGCTGGAAACGTTCGCAGGCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CCGPPELAAWCR*LGSAGNVRRLS Trigger: GGAAAGCCTGCGAACGTTTCCAGCAGATCCCAGCCAGCGACACCAAGCAGCTAGCTCAGGAGGCCCACAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063771.14 ENSMUST00000149858.2 |
||
| CDS CCA 72 bp | CCTGTCGGTCGATGTTCACTGGGCTCAGCGCCTGGCTaGATAGGAACTCGTGGTAGATGTTGTGGGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PVGRCSLGSAPG*IGTRGRCCGPP Trigger: AGGAGGCCCACAACATCTACCACGAGTTCCTATCCAGCCAGGCGCTGAGCCCAGTGAACATCGACCGACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063771.14 ENSMUST00000149858.2 |
||
| CDS CCA 72 bp | ATCCGGACCACTCGCTCCAGGCCGACCAACTCCAGCTaGAAGGTGATCCTGTTTTCCAGTCGCACTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: IRTTRSRPTNSS*KVILFSSRTSW Trigger: CCAGGAAGTGCGACTGGAAAACAGGATCACCTTCCAGCTGGAGTTGGTCGGCCTGGAGCGAGTGGTCCGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CCA 72 bp | CACTGGATTCTCCAAATCCATGGGCTGCTTCTCTCCTaGCCTGTGCAGTACCACCTGGTCCAGGCTCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HWILQIHGLLLS*PVQYHLVQAQA Trigger: GGCCTGAGCCTGGACCAGGTGGTACTGCACAGGCCAGGAGAGAAGCAGCCCATGGATTTGGAGAATCCAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CAA 72 bp | TTCATGGCTCCACCTGTCATCTCTCTACGAAAGGACTaGCGGAGAGGGCGGCCACAAGGGCCCTCAGCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: FMAPPVISLRKD*RRGRPQGPSAS Trigger: ACTCGCTGAGGGCCCTTGTGGCCGCCCTCTCCGCAAGTCCTTTCGTAGAGAGATGACAGGTGGAGCCATGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CAA 90 bp | AACTGGAGGACGATGGGGGAAGGTGACTGTCCTTGGTCTGGGTTCTaGGGAGGCATCCCTGACTGCGGCAGGGGGATATGCTTCTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: NWRTMGEGDCPWSGF*GGIPDCGRGICFWL Trigger: AAGCCAGAAGCATATCCCCCTGCCGCAGTCAGGGATGCCTCCCAAGAACCCAGACCAAGGACAGTCACCTTCCCCCATCGTCCTCCAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS TCA 72 bp | CCCAGGTCCAGACTGGCAGAAGAATTCAGGGACCCTTaGGACTCTCGTCGCAGGGCCGAATTCATGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PRSRLAEEFRDP*DSRRRAEFMAP Trigger: TGGAGCCATGAATTCGGCCCTGCGACGAGAGTCTCAAGGGTCCCTGAATTCTTCTGCCAGTCTGGACCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 72 bp | GAAGGTGATCCTGTTTTCCAGTCGCACTTCCTGGTCTaGCAGCACGGTGCAATCCTGATCCAGGACCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: EGDPVFQSHFLV*QHGAILIQDQG Trigger: GCCCTGGTCCTGGATCAGGATTGCACCGTGCTGGCAGACCAGGAAGTGCGACTGGAAAACAGGATCACCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 72 bp | GCCACTGAGCTCACTGGATTCTCCAAATCCATGGGCTaGTTCTCTCCTGGCCTGTGCAGTACCACCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ATELTGFSKSMG*FSPGLCSTTWS Trigger: GGACCAGGTGGTACTGCACAGGCCAGGAGAGAAGCAGCCCATGGATTTGGAGAATCCAGTGAGCTCAGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CCA 72 bp | GGAGGCATCCCTGACTGCGGCAGGGGGATATGCTTCTaGCTTCACTCATCTTTGCATCCGGAGGAGTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GGIPDCGRGICF*LHSSLHPEECP Trigger: TGGACACTCCTCCGGATGCAAAGATGAGTGAAGCCAGAAGCATATCCCCCTGCCGCAGTCAGGGATGCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CAA 72 bp | ACCCAGGTCCAGACTGGCAGAAGAATTCAGGGACCCTaGAGACTCTCGTCGCAGGGCCGAATTCATGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TQVQTGRRIQGP*RLSSQGRIHGS Trigger: GGAGCCATGAATTCGGCCCTGCGACGAGAGTCTCAAGGGTCCCTGAATTCTTCTGCCAGTCTGGACCTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CAA 90 bp | GGCAAGGAAACCCAGGTCCAGACTGGCAGAAGAATTCAGGGACCCTaGAGACTCTCGTCGCAGGGCCGAATTCATGGCTCCACCTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GKETQVQTGRRIQGP*RLSSQGRIHGSTCH Trigger: ATGACAGGTGGAGCCATGAATTCGGCCCTGCGACGAGAGTCTCAAGGGTCCCTGAATTCTTCTGCCAGTCTGGACCTGGGTTTCCTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 72 bp | TTCTCCAAATCCATGGGCTGCTTCTCTCCTGGCCTGTaGAGTACCACCTGGTCCAGGCTCAGGCCATGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: FSKSMGCFSPGL*STTWSRLRPCL Trigger: TAAGCATGGCCTGAGCCTGGACCAGGTGGTACTGCACAGGCCAGGAGAGAAGCAGCCCATGGATTTGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 72 bp | TTCTTGGGAGGCATCCCTGACTGCGGCAGGGGGATATaGTTCTGGCTTCACTCATCTTTGCATCCGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FLGGIPDCGRGI*FWLHSSLHPEE Trigger: CTCCTCCGGATGCAAAGATGAGTGAAGCCAGAAGCATATCCCCCTGCCGCAGTCAGGGATGCCTCCCAAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 72 bp | GAAGCTGCAGAAATTCTGGAAGGACCAGGTCCTCTTTaGGAAGAAGTCCTCTCTGATCGTGGGCCCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EAAEILEGPGPL*EEVLSDRGPRC Trigger: GCAGCGGGGCCCACGATCAGAGAGGACTTCTTCGCAAAGAGGACCTGGTCCTTCCAGAATTTCTGCAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CCA 72 bp | ATTGAAGATCTGAAGCTGCTGTGCTCGGAACATATCTaGCCGGGGCTGGGCCAGCACCTCCTCACTAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: IEDLKLLCSEHI*PGLGQHLLTKP Trigger: TGGCTTAGTGAGGAGGTGCTGGCCCAGCCCCGGCCAGATATGTTCCGAGCACAGCAGCTTCAGATCTTCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CAA 90 bp | ATCCCTGACTGCGGCAGGGGGATATGCTTCTGGCTTCACTCATCTTaGCATCCGGAGGAGTGTCCAAAACCAGTGTCTGTGAGGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: IPDCGRGICFWLHSS*HPEECPKPVSVRPL Trigger: CAGTGGCCTCACAGACACTGGTTTTGGACACTCCTCCGGATGCAAAGATGAGTGAAGCCAGAAGCATATCCCCCTGCCGCAGTCAGGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 72 bp | TGTTTTCCAGTCGCACTTCCTGGTCTGCCAGCACGGTaGAATCCTGATCCAGGACCAGGGCCTTCTGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CFPVALPGLPAR*NPDPGPGPSVH Trigger: ATGAACAGAAGGCCCTGGTCCTGGATCAGGATTGCACCGTGCTGGCAGACCAGGAAGTGCGACTGGAAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 72 bp | CACTTCCAAGGCTCTTCCGGTGACTCTCAGATTTGCTaGTCACAAAGGCAAGGAAACCCAGGTCCAGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: HFQGSSGDSQIC*SQRQGNPGPDW Trigger: CCAGTCTGGACCTGGGTTTCCTTGCCTTTGTGAGCAGCAAATCTGAGAGTCACCGGAAGAGCCTTGGAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS GCA 72 bp | CTCCACTTCCAAGGCTCTTCCGGTGACTCTCAGATTTaGTGCTCACAAAGGCAAGGAAACCCAGGTCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LHFQGSSGDSQI*CSQRQGNPGPD Trigger: GTCTGGACCTGGGTTTCCTTGCCTTTGTGAGCAGCAAATCTGAGAGTCACCGGAAGAGCCTTGGAAGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CAA 72 bp | TGCGGCAGGGGGATATGCTTCTGGCTTCACTCATCTTaGCATCCGGAGGAGTGTCCAAAACCAGTGTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: CGRGICFWLHSS*HPEECPKPVSV Trigger: CACAGACACTGGTTTTGGACACTCCTCCGGATGCAAAGATGAGTGAAGCCAGAAGCATATCCCCCTGCCGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
||
| CDS CCA 72 bp | AGAGCCTGGTCTTTGGGAAGGAAGCTGCAGAAATTCTaGAAGGACCAGGTCCTCTTTGCGAAGAAGTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RAWSLGRKLQKF*KDQVLFAKKSS Trigger: AGAGGACTTCTTCGCAAAGAGGACCTGGTCCTTCCAGAATTTCTGCAGCTTCCTTCCCAAAGACCAGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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| CDS TCA 72 bp | GTTCGCAGGCTTTCCAGAAAGTTACGTTCTCTGCGCTaGATTCCTTCTTCAGGAACTCCTCCATCTGAGACA | + |
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Preference number: 6 (lower is better) Translates to: VRRLSRKLRSLR*IPSSGTPPSET Trigger: TGTCTCAGATGGAGGAGTTCCTGAAGAAGGAATTCAGCGCAGAGAACGTAACTTTCTGGAAAGCCTGCGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149858.2 |
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| CDS GCA 72 bp | GAAACGTTCGCAGGCTTTCCAGAAAGTTACGTTCTCTaGGCTGAATTCCTTCTTCAGGAACTCCTCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: ETFAGFPESYVL*AEFLLQELLHL Trigger: CAGATGGAGGAGTTCCTGAAGAAGGAATTCAGCGCAGAGAACGTAACTTTCTGGAAAGCCTGCGAACGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149858.2 |
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| CDS GCA 72 bp | GAAACGTTCGCAGGCTTTCCAGAAAGTTACGTTCTCTaGGCTGAATTCCTTCTTCAGGAACTCAGTGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: ETFAGFPESYVL*AEFLLQELSEV Trigger: TACTTCACTGAGTTCCTGAAGAAGGAATTCAGCGCAGAGAACGTAACTTTCTGGAAAGCCTGCGAACGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063771.14 |
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