Pregenerated sensors for RGS11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024186Ensembl transcript IDs: ENSMUST00000025020.6, ENSMUST00000122058.8
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTaGGGTGGGGGTGGCAATGCTGGTGGCACTGAACAACCTGGACAG | + |
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Preference number: 1 (lower is better) Translates to: YWELHGRRPHLYFYL*GGGGNAGGTEQPGQ Trigger: CTGTCCAGGTTGTTCAGTGCCACCAGCATTGCCACCCCCACCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAGACTTGCCCGGTGGAGGAGCCTTCCTaGATGGGGTGGCATGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: TWTGRLDARAASLTKTCPVEEPS*MGWHGQ Trigger: CTGGCCATGCCACCCCATGCAGGAAGGCTCCTCCAC...CGGGCAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGACTAGAGAGCAGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTGTGGAGGAGCCTTCCTaGATGGGGTGGCATGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: RETREQPYWELHGRRPHLVEEPS*MGWHGQ Trigger: CTGGCCATGCCACCCCATGCAGGAAGGCTCCTCCAC...AAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCTGCTCTCTAGTCTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR CCA 90 bp | TATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGGTGGGAGGAGCCTTCCTGCATaGGGTGGCATGGCCAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: YWELHGRRPHLYFYLWGGRSLPA*GGMARD Trigger: GTCTCTGGCCATGCCACCCCATGCAGGAAGGCTCCT...CCCACCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR CCA 90 bp | TATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGGTGGGCCTGGACAGGAAGACTaGATGCCAGGGCTGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: YWELHGRRPHLYFYLWGGPGQED*MPGLPA Trigger: AGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAGG...CCCACCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR TCA 90 bp | GCAATGCTGGTGGCACTGAACAACCTGGACAGGAAGACTGGATGCCAGGGCTGCTCACTGTGTACACAGTaGTGCCAGTGCTGGGGAATC | + |
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Preference number: 2 (lower is better) Translates to: AMLVALNNLDRKTGCQGCSLCTQ*CQCWGI Trigger: GATTCCCCAGCACTGGCATCACTGTGTACACAGTGA...GCAGCCCTGGCATCCAGTCTTCCTGTCCAGGTTGTTCAGTGCCACCAGCATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAGACTTGCCCGATGGCATGGCCAGAGACTaGTACCTCCTCATGTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LDRKTGCQGCQLDKDLPDGMARD*YLLMCH Trigger: GTGACACATGAGGAGGTATCAGTCTCTGGCCATGCC...ATCGGGCAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTACCTCTGGGGTGGGGGTGGCAATGCTGGTGGCACTGAACAACCTGGACAGACTGGATGCCAGGGCTaGCAGCTTGACAAAGACTTG | + |
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Preference number: 2 (lower is better) Translates to: FYLWGGGGNAGGTEQPGQTGCQG*QLDKDL Trigger: CAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGT...CTGTCCAGGTTGTTCAGTGCCACCAGCATTGCCACCCCCACCCCAGAGGTAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGACTAGAGAGCAGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTACTGGATGCCAGGGCTaGCAGCTTGACAAAGACTTG | + |
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Preference number: 2 (lower is better) Translates to: RETREQPYWELHGRRPHLTGCQG*QLDKDL Trigger: CAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGT...AAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCTGCTCTCTAGTCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGGATTATACAGTGGAGGAGCCTTCCTGCATGGGGTGGCATGGCCAGAGACTTCACTGTGTACACAGTaGTGCCAGTGCTGGGGAATC | + |
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Preference number: 2 (lower is better) Translates to: GGLYSGGAFLHGVAWPETSLCTQ*CQCWGI Trigger: GATTCCCCAGCACTGGCATCACTGTGTACACAGTGA...AGTCTCTGGCCATGCCACCCCATGCAGGAAGGCTCCTCCACTGTATAATCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR TCA 90 bp | GCAATGCTGGTGGCACTGAACAACCTGGACAGGAAGACTGGATGCCAGGGCTGCAGCCTAGTCCTGAACTaGAGACTAAAGGACCTCACT | + |
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Preference number: 2 (lower is better) Translates to: AMLVALNNLDRKTGCQGCSLVLN*RLKDLT Trigger: AGTGAGGTCCTTTAGTCTTCAGTTCAGGACTAGGCT...GCAGCCCTGGCATCCAGTCTTCCTGTCCAGGTTGTTCAGTGCCACCAGCATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTACCTCTGGGGTGGGGGTGGCAATGCTGGTGGCACTGAACAACCTGGACAGAGCCTAGTCCTGAACTaGAGACTAAAGGACCTCACT | + |
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Preference number: 2 (lower is better) Translates to: FYLWGGGGNAGGTEQPGQSLVLN*RLKDLT Trigger: AGTGAGGTCCTTTAGTCTTCAGTTCAGGACTAGGCT...CTGTCCAGGTTGTTCAGTGCCACCAGCATTGCCACCCCCACCCCAGAGGTAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAGACTTGCCCGATCCACTGGGTTTAGCCTaGGGAGGATTATACAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: LDRKTGCQGCQLDKDLPDPLGLA*GGLYSG Trigger: TCCACTGTATAATCCTCCTCAGGCTAAACCCAGTGG...ATCGGGCAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAGAACTGGGAGCCCTGTAGTCAGGACAGCAGTGTGCTGTCGCCTTTCTAGACCTTCCTGCATGGGGTaGCATGGCCAGAGACTGATA | + |
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Preference number: 2 (lower is better) Translates to: MRTGSPVVRTAVCCRLSRPSCMG*HGQRLI Trigger: TATCAGTCTCTGGCCATGCCACCCCATGCAGGAAGG...TCTAGAAAGGCGACAGCACACTGCTGTCCTGACTACAGGGCTCCCAGTTCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGTGGAAGAGACGCCACGTACGGCAATGACATGGCACCTGCAGACATCGTCCATGTGTCACTGACTTaGCATTCTAGAGTTGAGACA | + |
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Preference number: 2 (lower is better) Translates to: TGGRDATYGNDMAPADIVHVSLT*HSRVET Trigger: TGTCTCAACTCTAGAATGTCAAGTCAGTGACACATG...GACGATGTCTGCAGGTGCCATGTCATTGCCGTACGTGGCGTCTCTTCCACCTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR CCA 72 bp | GAAGCCACTGGGTTTAGCCTGAGGAGGATTATACAGTaGAGGAGCCTTCCTGCATGGGGTGGCATGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: EATGFSLRRIIQ*RSLPAWGGMAR Trigger: TCTGGCCATGCCACCCCATGCAGGAAGGCTCCTCCACTGTATAATCCTCCTCAGGCTAAACCCAGTGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR CCA 72 bp | CTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTaGGGTGGGGGTGGCAATGCTGGTGGCACTGAACAA | + |
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Preference number: 3 (lower is better) Translates to: LHGRRPHLYFYL*GGGGNAGGTEQ Trigger: TTGTTCAGTGCCACCAGCATTGCCACCCCCACCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR GCA 72 bp | CTGAACAACCTGGACAGGAAGACTGGATGCCAGGGCTaGCAGCTTGACAAAGACTTGCCCGATGAGAACTGG | + |
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Preference number: 3 (lower is better) Translates to: LNNLDRKTGCQG*QLDKDLPDENW Trigger: CCAGTTCTCATCGGGCAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAGGTTGTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR GCA 72 bp | ATGAGAACTGGGAGCCCTGTAGTCAGGACAGCAGTGTaGTGTCGCCTTTCTAGAGAGCTGATCAGACGACAG | + |
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Preference number: 3 (lower is better) Translates to: MRTGSPVVRTAV*CRLSRELIRRQ Trigger: CTGTCGTCTGATCAGCTCTCTAGAAAGGCGACAGCACACTGCTGTCCTGACTACAGGGCTCCCAGTTCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR CCA 72 bp | TTATACAGTGGAGGAGCCTTCCTGCATGGGGTGGCATaGCCAGAGACTGATACCTCCTCATGTGTCACTGAC | + |
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Preference number: 3 (lower is better) Translates to: LYSGGAFLHGVA*PETDTSSCVTD Trigger: GTCAGTGACACATGAGGAGGTATCAGTCTCTGGCCATGCCACCCCATGCAGGAAGGCTCCTCCACTGTATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR CCA 72 bp | GAGGATTATACAGTGGAGGAGCCTTCCTGCATGGGGTaGCATGGCCAGAGACTGATACCTCCTCATGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: EDYTVEEPSCMG*HGQRLIPPHVS Trigger: TGACACATGAGGAGGTATCAGTCTCTGGCCATGCCACCCCATGCAGGAAGGCTCCTCCACTGTATAATCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR GCA 72 bp | TGTGAAGGGAGACTAGAGAGCAGCCCTATTGGGAGCTaGATGGCAGGAGGCCCCATCTTTATTTCTACCTCT | + |
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Preference number: 3 (lower is better) Translates to: CEGRLESSPIGS*MAGGPIFISTS Trigger: AGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCTGCTCTCTAGTCTCCCTTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR CAA 90 bp | GCCTTCCTGCATGGGGTGGCATGGCCAGAGACTGATACCTCCTCATGTGTCACTCTTGACATTCTAGAGTaGAGACAGCCTAGTCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: AFLHGVAWPETDTSSCVTLDILE*RQPSPE Trigger: TTCAGGACTAGGCTGTCTCAACTCTAGAATGTCAAG...AGTGACACATGAGGAGGTATCAGTCTCTGGCCATGCCACCCCATGCAGGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGGTGGAAGAGACGCCACGTACGGCAATGACATGGCACCTGCAGACATCGTCCTTGACATTCTAGAGTaGAGACAGCCTAGTCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: TGGRDATYGNDMAPADIVLDILE*RQPSPE Trigger: TTCAGGACTAGGCTGTCTCAACTCTAGAATGTCAAG...GACGATGTCTGCAGGTGCCATGTCATTGCCGTACGTGGCGTCTCTTCCACCTGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CCA 90 bp | AGGGAGACTAGAGAGCAGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTACCAAGGTGGGGACCTaGGCCTGTCCGCCAAAGCGC | + |
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Preference number: 4 (lower is better) Translates to: RETREQPYWELHGRRPHLTKVGT*ACPPKR Trigger: GCGCTTTGGCGGACAGGCCCAGGTCCCCACCTTGGT...AAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCTGCTCTCTAGTCTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CCA 90 bp | GCAATGCTGGTGGCACTGAACAACCTGGACAGGAAGACTGGATGCCAGGGCTGCCAGAGTCCACCAAGGTaGGGACCTGGGCCTGTCCGC | + |
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Preference number: 4 (lower is better) Translates to: AMLVALNNLDRKTGCQGCQSPPR*GPGPVR Trigger: GCGGACAGGCCCAGGTCCCCACCTTGGTGGACTCTG...GCAGCCCTGGCATCCAGTCTTCCTGTCCAGGTTGTTCAGTGCCACCAGCATTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR TCA 90 bp | TGCCCGATGAGAACTGGGAGCCCTGTAGTCAGGACAGCAGTGTGCTGTCGCCTTAGCAGGGCTGGGGCTTaGGTGCAGAGGCTTCCGCAA | + |
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Preference number: 4 (lower is better) Translates to: CPMRTGSPVVRTAVCCRLSRAGA*VQRLPQ Trigger: TTGCGGAAGCCTCTGCACTCAAGCCCCAGCCCTGCT...AAGGCGACAGCACACTGCTGTCCTGACTACAGGGCTCCCAGTTCTCATCGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR TCA 90 bp | GAGGAGGATTATACAGTGGAGGAGCCTTCCTGCATGGGGTGGCATGGCCAGAGAAGCAGGGCTGGGGCTTaGGTGCAGAGGCTTCCGCAA | + |
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Preference number: 4 (lower is better) Translates to: EEDYTVEEPSCMGWHGQRSRAGA*VQRLPQ Trigger: TTGCGGAAGCCTCTGCACTCAAGCCCCAGCCCTGCT...TCTCTGGCCATGCCACCCCATGCAGGAAGGCTCCTCCACTGTATAATCCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR GCA 90 bp | GCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGGGCTGCGCCAGGAGTGTaGCCAGGTGCAGGGCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: ALLGAAWQEAPSLFLPLGAAPGV*PGAGLH Trigger: ATGAAGCCCTGCACCTGGGCACACTCCTGGCGCAGC...CCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR GCA 90 bp | TGCCCGATGAGAACTGGGAGCCCTGTAGTCAGGACAGCAGTGTGCTGTCGCCTTTTCAGGGGAACTGGTTaGTGCAGGCTCCCTGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: CPMRTGSPVVRTAVCCRLFRGTG*CRLPGG Trigger: ACCCCCAGGGAGCCTGCAGCAACCAGTTCCCCTGAA...AAGGCGACAGCACACTGCTGTCCTGACTACAGGGCTCCCAGTTCTCATCGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR GCA 90 bp | GGGAGACTAGAGAGCAGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTTTCAGGGGAACTGGTTaGTGCAGGCTCCCTGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GRLESSPIGSCMAGGPIFFRGTG*CRLPGG Trigger: ACCCCCAGGGAGCCTGCAGCAACCAGTTCCCCTGAA...AAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCTGCTCTCTAGTCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CCA 90 bp | GAGACTAGAGAGCAGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATACCAAGGTGGGGACCTaGGCCTGTCCGCCAAAGCGC | + |
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Preference number: 4 (lower is better) Translates to: ETREQPYWELHGRRPHLYTKVGT*ACPPKR Trigger: GCGCTTTGGCGGACAGGCCCAGGTCCCCACCTTGGT...ATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCTGCTCTCTAGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CCA 90 bp | TATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGGTGGGCAGAGTCCACCAAGGTaGGGACCTGGGCCTGTCCGC | + |
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Preference number: 4 (lower is better) Translates to: YWELHGRRPHLYFYLWGGQSPPR*GPGPVR Trigger: GCGGACAGGCCCAGGTCCCCACCTTGGTGGACTCTG...CCCACCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CCA 90 bp | GGAGGATTATACAGTGGAGGAGCCTTCCTGCATGGGGTGGCATGGCCAGAGACTCAGGACATAGCGGTGTaGCTGGCGCAGACCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GGLYSGGAFLHGVAWPETQDIAV*LAQTLQ Trigger: CTGGAGGGTCTGCGCCAGCCACACCGCTATGTCCTG...AGTCTCTGGCCATGCCACCCCATGCAGGAAGGCTCCTCCACTGTATAATCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CCA 90 bp | GCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGGCAGGACATAGCGGTGTaGCTGGCGCAGACCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ALLGAAWQEAPSLFLPLGQDIAV*LAQTLQ Trigger: CTGGAGGGTCTGCGCCAGCCACACCGCTATGTCCTG...CCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR TCA 90 bp | ACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAGACTTGCCCGATGAGAGCAGCTCCCGGAAGCTaGAGCTCCATCGCTCAACGC | + |
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Preference number: 4 (lower is better) Translates to: TGRLDARAASLTKTCPMRAAPGS*SSIAQR Trigger: GCGTTGAGCGATGGAGCTTCAGCTTCCGGGAGCTGC...TCTCATCGGGCAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR TCA 90 bp | TTCTACCTCTGGGGTGGGGGTGGCAATGCTGGTGGCACTGAACAACCTGGACAGGGGGCCAGGAACTGCTaGTACACAGAGTCCACCAAG | + |
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Preference number: 4 (lower is better) Translates to: FYLWGGGGNAGGTEQPGQGARNC*YTESTK Trigger: CTTGGTGGACTCTGTGTATCAGCAGTTCCTGGCCCC...CTGTCCAGGTTGTTCAGTGCCACCAGCATTGCCACCCCCACCCCAGAGGTAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR GCA 90 bp | ACCTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAGACTTGCCCGAGGAGTGTGCCCAGGTaGAGGGCTTCATCCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: TWTGRLDARAASLTKTCPRSVPR*RASSSK Trigger: CTTGGAGGATGAAGCCCTGCACCTGGGCACACTCCT...CGGGCAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR GCA 90 bp | TGCCCGATGAGAACTGGGAGCCCTGTAGTCAGGACAGCAGTGTGCTGTCGCCTTCCGGTTCCTGCCCAGTaGCTTCCTGAAGCACTCGAT | + |
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Preference number: 4 (lower is better) Translates to: CPMRTGSPVVRTAVCCRLPVPAQ*LPEALD Trigger: ATCGAGTGCTTCAGGAAGGCACTGGGCAGGAACCGG...AAGGCGACAGCACACTGCTGTCCTGACTACAGGGCTCCCAGTTCTCATCGGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR GCA 90 bp | TTCTACCTCTGGGGTGGGGGTGGCAATGCTGGTGGCACTGAACAACCTGGACAGGCGCAGCTCCTCACATaGCTCCCAGAAGCTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: FYLWGGGGNAGGTEQPGQAQLLT*LPEAEV Trigger: AACCTCAGCTTCTGGGAGGCATGTGAGGAGCTGCGC...CTGTCCAGGTTGTTCAGTGCCACCAGCATTGCCACCCCCACCCCAGAGGTAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR GCA 90 bp | GCCTTCCTGCATGGGGTGGCATGGCCAGAGACTGATACCTCCTCATGTGTCACTAGGGGAACTGGTTGCTaGAGGCTCCCTGGGGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: AFLHGVAWPETDTSSCVTRGTGC*RLPGGR Trigger: TCTACCCCCAGGGAGCCTGCAGCAACCAGTTCCCCT...AGTGACACATGAGGAGGTATCAGTCTCTGGCCATGCCACCCCATGCAGGAAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CCA 90 bp | GGGAGACTAGAGAGCAGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTGTGATCAGAAGGCGCTaGCTCCGCATCTTCACGCCT | + |
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Preference number: 4 (lower is better) Translates to: GRLESSPIGSCMAGGPIFVIRRR*LRIFTP Trigger: AGGCGTGAAGATGCGGAGCCAGCGCCTTCTGATCAC...AAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCTGCTCTCTAGTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CCA 90 bp | AGGGAGACTAGAGAGCAGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTAGAAAGTCCATGAAGTaGGCACGCCCCACGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: RETREQPYWELHGRRPHLRKSMK*ARPTGS Trigger: TGACCCCGTGGGGCGTGCCCACTTCATGGACTTTCT...AAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCTGCTCTCTAGTCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGAGGATTATACAGTGGAGGAGCCTTCCTGCATGGGGTGGCATGGCCAGAACTGGAGAGCAGGGCTaGGGCTTGAGTGCAGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LRRIIQWRSLPAWGGMARTGEQG*GLSAEA Trigger: AGCCTCTGCACTCAAGCCCCAGCCCTGCTCTCCAGT...TCTGGCCATGCCACCCCATGCAGGAAGGCTCCTCCACTGTATAATCCTCCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CCA 90 bp | GCCTTCCTGCATGGGGTGGCATGGCCAGAGACTGATACCTCCTCATGTGTCACTACTGGAGAGCAGGGCTaGGGCTTGAGTGCAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFLHGVAWPETDTSSCVTTGEQG*GLSAEA Trigger: AGCCTCTGCACTCAAGCCCCAGCCCTGCTCTCCAGT...AGTGACACATGAGGAGGTATCAGTCTCTGGCCATGCCACCCCATGCAGGAAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAGACTTGCCCGTGCCCAGTGCCTTCCTaGAGCACTCGATCTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: TWTGRLDARAASLTKTCPCPVPS*STRSHT Trigger: AGTGTGAGATCGAGTGCTTCAGGAAGGCACTGGGCA...CGGGCAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGGCCGGTTCCTGCCCAGTaGCTTCCTGAAGCACTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALLGAAWQEAPSLFLPLGPVPAQ*LPEALD Trigger: ATCGAGTGCTTCAGGAAGGCACTGGGCAGGAACCGG...CCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGAACAACCTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAGGATCATGCGGCCCGTaGTGGCTGCTGAACTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALNNLDRKTGCQGCQLDKGSCGP*WLLNFR Trigger: CCTGAAGTTCAGCAGCCAGCACGGGCCGCATGATCC...TTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAGGTTGTTCAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | CTGCATGGGGTGGCATGGCCAGAGACTGATACCTCCTCATGTGTCACTGACTTGAGGGGAACTGGTTGCTaGAGGCTCCCTGGGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHGVAWPETDTSSCVTDLRGTGC*RLPGGR Trigger: TCTACCCCCAGGGAGCCTGCAGCAACCAGTTCCCCT...CAAGTCAGTGACACATGAGGAGGTATCAGTCTCTGGCCATGCCACCCCATGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGGGTGATCAGAAGGCGCTaGCTCCGCATCTTCACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLGAAWQEAPSLFLPLGVIRRR*LRIFTP Trigger: AGGCGTGAAGATGCGGAGCCAGCGCCTTCTGATCAC...CCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | CTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAGACTTGCCCGATTCGGGACTCACGCAGTaGGTAGATGTAGCCGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDRKTGCQGCQLDKDLPDSGLTQ*VDVAVL Trigger: CAGCACGGCTACATCTACCCACTGCGTGAGTCCCGA...ATCGGGCAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCTGCATGGGGTGGCATGGCCAGAGACTGATACCTCCTCATGTGTCACTTCATGCGGCCCGTGCTaGCTGCTGAACTTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AFLHGVAWPETDTSSCVTSCGPC*LLNFRY Trigger: GTACCTGAAGTTCAGCAGCCAGCACGGGCCGCATGA...AGTGACACATGAGGAGGTATCAGTCTCTGGCCATGCCACCCCATGCAGGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| 3UTR CAA 72 bp | ACCTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTaGACAAAGACTTGCCCGATGAGAACTGGGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TWTGRLDARAAS*TKTCPMRTGSP Trigger: AGGGCTCCCAGTTCTCATCGGGCAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTCCTGCATGGGGTGGCATGGCCAGAGACTGATACCTCCTCATGTGTCACTTGCCCAGTGCCTTCCTaGAGCACTCGATCTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: AFLHGVAWPETDTSSCVTCPVPS*STRSHT Trigger: AGTGTGAGATCGAGTGCTTCAGGAAGGCACTGGGCA...AGTGACACATGAGGAGGTATCAGTCTCTGGCCATGCCACCCCATGCAGGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAACTGGGAGCCCTGTAGTCAGGACAGCAGTGTGCTGTCGCCTTTCTAGATCTGGAGAAAGTCCATaGAGTGGGCACGCCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: MRTGSPVVRTAVCCRLSRSGESP*SGHAPR Trigger: CCGTGGGGCGTGCCCACTTCATGGACTTTCTCCAGA...TCTAGAAAGGCGACAGCACACTGCTGTCCTGACTACAGGGCTCCCAGTTCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | CCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGGTAGGAGTGTGCCCAGGTaGAGGGCTTCATCCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PYWELHGRRPHLYFYLWGRSVPR*RASSSK Trigger: CTTGGAGGATGAAGCCCTGCACCTGGGCACACTCCT...ACCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGAGGATTATACAGTGGAGGAGCCTTCCTGCATGGGGTGGCATGGCCAGACCCCTCTCAGGACCCTaGTCCAAAATGTTAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRRIIQWRSLPAWGGMARPLSGP*SKMLGA Trigger: GGCACCTAACATTTTGGAGCAGGGTCCTGAGAGGGG...TCTGGCCATGCCACCCCATGCAGGAAGGCTCCTCCACTGTATAATCCTCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGAACTGGGAGCCCTGTAGTCAGGACAGCAGTGTGCTGTCGCCTTTCTAGAGGATCATGCGGCCCGTaGTGGCTGCTGAACTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MRTGSPVVRTAVCCRLSRGSCGP*WLLNFR Trigger: CCTGAAGTTCAGCAGCCAGCACGGGCCGCATGATCC...TCTAGAAAGGCGACAGCACACTGCTGTCCTGACTACAGGGCTCCCAGTTCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | GAGACTAGAGAGCAGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATGCGCAGCTCCTCACATaGCTCCCAGAAGCTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ETREQPYWELHGRRPHLYAQLLT*LPEAEV Trigger: AACCTCAGCTTCTGGGAGGCATGTGAGGAGCTGCGC...ATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCTGCTCTCTAGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGACTAGAGAGCAGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTGATGTGAAGCTGTGCTaGATCCAGGACATAGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RETREQPYWELHGRRPHLDVKLC*IQDIAV Trigger: CACCGCTATGTCCTGGATGCAGCACAGCTTCACATC...AAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCTGCTCTCTAGTCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAGACTTGCCCGGATGTGAAGCTGTGCTaGATCCAGGACATAGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TWTGRLDARAASLTKTCPDVKLC*IQDIAV Trigger: CACCGCTATGTCCTGGATGCAGCACAGCTTCACATC...CGGGCAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAGACTTGCCCGATGAGACTGCCCGCTACCGCGTaGGGAATGACAGTGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGRLDARAASLTKTCPMRLPATA*GMTVIR Trigger: TCTGATCACTGTCATTCCCCACGCGGTAGCGGGCAG...TCTCATCGGGCAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | CCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGGTTCGGGACTCACGCAGTaGGTAGATGTAGCCGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PYWELHGRRPHLYFYLWGSGLTQ*VDVAVL Trigger: CAGCACGGCTACATCTACCCACTGCGTGAGTCCCGA...ACCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGAACAACCTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAAGAAAGTCCATGAAGTaGGCACGCCCCACGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALNNLDRKTGCQGCQLDKRKSMK*ARPTGS Trigger: TGACCCCGTGGGGCGTGCCCACTTCATGGACTTTCT...TTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAGGTTGTTCAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | GCAATGCTGGTGGCACTGAACAACCTGGACAGGAAGACTGGATGCCAGGGCTGCGCGCTTTGTCTCCAGTaGAATCACAGCTTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AMLVALNNLDRKTGCQGCALCLQ*NHSFLQ Trigger: CTGGAGGAAGCTGTGATTCCACTGGAGACAAAGCGC...GCAGCCCTGGCATCCAGTCTTCCTGTCCAGGTTGTTCAGTGCCACCAGCATTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGAACAACCTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAACCCCTCTCAGGACCCTaGTCCAAAATGTTAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALNNLDRKTGCQGCQLDKPLSGP*SKMLGA Trigger: GGCACCTAACATTTTGGAGCAGGGTCCTGAGAGGGG...TTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAGGTTGTTCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGCGCATCTTCACGCCTTaGTCAGGGTCCTGCATACTC | + |
|
Preference number: 4 (lower is better) Translates to: SPIGSCMAGGPIFISTSGRIFTP*SGSCIL Trigger: GAGTATGCAGGACCCTGACCAAGGCGTGAAGATGCG...CCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | CCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGGTCGCATCTTCACGCCTTaGTCAGGGTCCTGCATACTC | + |
|
Preference number: 4 (lower is better) Translates to: PYWELHGRRPHLYFYLWGRIFTP*SGSCIL Trigger: GAGTATGCAGGACCCTGACCAAGGCGTGAAGATGCG...ACCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGAACTGGGAGCCCTGTAGTCAGGACAGCAGTGTGCTGTCGCCTTTCTAGATCATGCGGCCCGTGCTaGCTGCTGAACTTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MRTGSPVVRTAVCCRLSRSCGPC*LLNFRY Trigger: GTACCTGAAGTTCAGCAGCCAGCACGGGCCGCATGA...TCTAGAAAGGCGACAGCACACTGCTGTCCTGACTACAGGGCTCCCAGTTCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGACTAGAGAGCAGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTAGGCTTCCGCAAGAATaGAAATGGCCAGCGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRLESSPIGSCMAGGPIFRLPQE*KWPALC Trigger: ACAAAGCGCTGGCCATTTCCATTCTTGCGGAAGCCT...AAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCTGCTCTCTAGTCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGGCTCCAAAATGTTAGGTaGCCCAGGAGGGGGCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: ALLGAAWQEAPSLFLPLGLQNVR*PRRGLI Trigger: AATAAGCCCCCTCCTGGGGCACCTAACATTTTGGAG...CCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGGTCATCTGCATGTGACTaGGGTTGTAAGAGCCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLGAAWQEAPSLFLPLGSSACD*GCKSPS Trigger: AGAGGGGCTCTTACAACCCCAGTCACATGCAGATGA...CCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGAGGATTATACAGTGGAGGAGCCTTCCTGCATGGGGTGGCATGGCCAGACTTCATCCTCCAAGATaGAGAACTTCTGAACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRRIIQWRSLPAWGGMARLHPPR*RTSEPA Trigger: GGCTGGTTCAGAAGTTCTGCATCTTGGAGGATGAAG...TCTGGCCATGCCACCCCATGCAGGAAGGCTCCTCCACTGTATAATCCTCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | TATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGGTGGGCTCCAAAATGTTAGGTaGCCCAGGAGGGGGCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: YWELHGRRPHLYFYLWGGLQNVR*PRRGLI Trigger: AATAAGCCCCCTCCTGGGGCACCTAACATTTTGGAG...CCCACCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAGGATTATACAGTGGAGGAGCCTTCCTGCATGGGGTGGCATGGCCAGAGAACCAGATCCCATGCATaGTTGATCTTCTTGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EEDYTVEEPSCMGWHGQRTRSHA*LIFLCS Trigger: GCTGCACAAGAAGATCAACCATGCATGGGATCTGGT...TCTCTGGCCATGCCACCCCATGCAGGAAGGCTCCTCCACTGTATAATCCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGAACTGGGAGCCCTGTAGTCAGGACAGCAGTGTGCTGTCGCCTTTCTAGAGCGCTTTGTCTCCAGTaGAATCACAGCTTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MRTGSPVVRTAVCCRLSRALCLQ*NHSFLQ Trigger: CTGGAGGAAGCTGTGATTCCACTGGAGACAAAGCGC...TCTAGAAAGGCGACAGCACACTGCTGTCCTGACTACAGGGCTCCCAGTTCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | GAGACTAGAGAGCAGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATAGGCTTCCGCAAGAATaGAAATGGCCAGCGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ETREQPYWELHGRRPHLYRLPQE*KWPALC Trigger: ACAAAGCGCTGGCCATTTCCATTCTTGCGGAAGCCT...ATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCTGCTCTCTAGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGAACAACCTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAACTTCATCCTCCAAGATaGAGAACTTCTGAACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALNNLDRKTGCQGCQLDKLHPPR*RTSEPA Trigger: GGCTGGTTCAGAAGTTCTGCATCTTGGAGGATGAAG...TTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAGGTTGTTCAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGAACAACCTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAACCAGATCCCATGCATaGTTGATCTTCTTGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALNNLDRKTGCQGCQLDKTRSHA*LIFLCS Trigger: GCTGCACAAGAAGATCAACCATGCATGGGATCTGGT...TTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAGGTTGTTCAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGAACTGGGAGCCCTGTAGTCAGGACAGCAGTGTGCTGTCGCCTTTCTAGATCATCTGCATGTGACTaGGGTTGTAAGAGCCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MRTGSPVVRTAVCCRLSRSSACD*GCKSPS Trigger: AGAGGGGCTCTTACAACCCCAGTCACATGCAGATGA...TCTAGAAAGGCGACAGCACACTGCTGTCCTGACTACAGGGCTCCCAGTTCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAGACTTGCCCGATGAGAAGGAGTCCTTCTTCATaGGCATGTAGATGTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGRLDARAASLTKTCPMRRSPSS*ACRCEA Trigger: AGCTTCACATCTACATGCTCATGAAGAAGGACTCCT...TCTCATCGGGCAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR TCA 90 bp | GCACTGAACAACCTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAAGGAGTCCTTCTTCATaGGCATGTAGATGTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALNNLDRKTGCQGCQLDKRSPSS*ACRCEA Trigger: AGCTTCACATCTACATGCTCATGAAGAAGGACTCCT...TTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAGGTTGTTCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTCCTGCATGGGGTGGCATGGCCAGAGACTGATACCTCCTCATGTGTCACTCAATACCAGATCCCATaGATGGTTGATCTTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AFLHGVAWPETDTSSCVTQYQIP*MVDLLV Trigger: CACAAGAAGATCAACCATGCATGGGATCTGGTATTG...AGTGACACATGAGGAGGTATCAGTCTCTGGCCATGCCACCCCATGCAGGAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | TTCTACCTCTGGGGTGGGGGTGGCAATGCTGGTGGCACTGAACAACCTGGACAGAAAGCCCCTTGTTTTTaGATGTTCTTCTTAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FYLWGGGGNAGGTEQPGQKAPCF*MFFLAR Trigger: TCTGGCTAAGAAGAACATCCAAAAACAAGGGGCTTT...CTGTCCAGGTTGTTCAGTGCCACCAGCATTGCCACCCCCACCCCAGAGGTAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR GCA 90 bp | TATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGGTGGGCAATACCAGATCCCATaGATGGTTGATCTTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YWELHGRRPHLYFYLWGGQYQIP*MVDLLV Trigger: CACAAGAAGATCAACCATGCATGGGATCTGGTATTG...CCCACCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGAACTGGGAGCCCTGTAGTCAGGACAGCAGTGTGCTGTCGCCTTTCTAGAAAAGCCCCTTGTTTTTaGATGTTCTTCTTAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MRTGSPVVRTAVCCRLSRKAPCF*MFFLAR Trigger: TCTGGCTAAGAAGAACATCCAAAAACAAGGGGCTTT...TCTAGAAAGGCGACAGCACACTGCTGTCCTGACTACAGGGCTCCCAGTTCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS GCA 90 bp | TCAGGGTCCTGCATACTCACGACTACCCGCTCCATCTTGCTGAGATaGGGTCTCTGCATTCGGGAGCACCCGCCGTGGGGTGTGCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SGSCILTTTRSILLR*GLCIREHPPWGVQR Trigger: CCGCTGCACACCCCACGGCGGGTGCTCCCGAATGCAGAGACCGCATCTCAGCAAGATGGAGCGGGTAGTCGTGAGTATGCAGGACCCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
||
| CDS CCA 90 bp | CAGCTCCAGGGGCCAGGAACTGCTGATACACAGAGTCCACCAAGGTaGGGACCTGGGCCTGTCCGCCAAAGCGCAGCTCCTCACATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QLQGPGTADTQSPPR*GPGPVRQSAAPHMP Trigger: AGGCATGTGAGGAGCTGCGCTTTGGCGGACAGGCCCAGGTCCCCACCTTGGTGGACTCTGTGTATCAGCAGTTCCTGGCCCCTGGAGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS TCA 90 bp | CTTGGTCAGGGTCCTGCATACTCACGACTACCCGCTCCATCTTGCTaGGATGCGGTCTCTGCATTCGGGAGCACCCGCCGTGGGGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: LGQGPAYSRLPAPSC*DAVSAFGSTRRGVC Trigger: GCACACCCCACGGCGGGTGCTCCCGAATGCAGAGACCGCATCTCAGCAAGATGGAGCGGGTAGTCGTGAGTATGCAGGACCCTGACCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CAA 90 bp | AGGGAGACTAGAGAGCAGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTCTTCAGGGGAACTGGTaGCTGCAGGCTCCCTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: RETREQPYWELHGRRPHLLQGNW*LQAPWG Trigger: CCCCCAGGGAGCCTGCAGCAACCAGTTCCCCTGAAG...AAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCTGCTCTCTAGTCTCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS GCA 90 bp | TGCATACTCACGACTACCCGCTCCATCTTGCTGAGATGCGGTCTCTaGATTCGGGAGCACCCGCCGTGGGGTGTGCAGCGGGTAACCATG | + |
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Preference number: 5 (lower is better) Translates to: CILTTTRSILLRCGL*IREHPPWGVQRVTM Trigger: CATGGTTACCCGCTGCACACCCCACGGCGGGTGCTCCCGAATGCAGAGACCGCATCTCAGCAAGATGGAGCGGGTAGTCGTGAGTATGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025020.6 |
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| CDS CCA 90 bp | TCTCTGCCCGCTACCGCGTGGGGAATGACAGTGATCAGAAGGCGCTaGCTCCGCATCTTCACGCCTTGGTCAGGGTCCTGCATACTCACG | + |
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Preference number: 5 (lower is better) Translates to: SLPATAWGMTVIRRR*LRIFTPWSGSCILT Trigger: CGTGAGTATGCAGGACCCTGACCAAGGCGTGAAGATGCGGAGCCAGCGCCTTCTGATCACTGTCATTCCCCACGCGGTAGCGGGCAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CAA 90 bp | AGGGAGACTAGAGAGCAGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTGCTCAACGCGGAGTTTaGTGGGGGCAGCCACGTTGG | + |
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Preference number: 5 (lower is better) Translates to: RETREQPYWELHGRRPHLAQRGV*WGQPRW Trigger: CCAACGTGGCTGCCCCCACAAAACTCCGCGTTGAGC...AAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCTGCTCTCTAGTCTCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CAA 90 bp | TTCTACCTCTGGGGTGGGGGTGGCAATGCTGGTGGCACTGAACAACCTGGACAGGCTCAACGCGGAGTTTaGTGGGGGCAGCCACGTTGG | + |
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Preference number: 5 (lower is better) Translates to: FYLWGGGGNAGGTEQPGQAQRGV*WGQPRW Trigger: CCAACGTGGCTGCCCCCACAAAACTCCGCGTTGAGC...CTGTCCAGGTTGTTCAGTGCCACCAGCATTGCCACCCCCACCCCAGAGGTAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CAA 90 bp | GAGGAGGATTATACAGTGGAGGAGCCTTCCTGCATGGGGTGGCATGGCCAGAGACTTCAGGGGAACTGGTaGCTGCAGGCTCCCTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: EEDYTVEEPSCMGWHGQRLQGNW*LQAPWG Trigger: CCCCCAGGGAGCCTGCAGCAACCAGTTCCCCTGAAG...TCTCTGGCCATGCCACCCCATGCAGGAAGGCTCCTCCACTGTATAATCCTCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS TCA 90 bp | AGTGTGCCCAGGTGCAGGGCTTCATCCTCCAAGATGCAGAACTTCTaGACCAGCCATTCCACGAGGTCTCTGCCCGCTACCGCGTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: SVPRCRASSSKMQNF*TSHSTRSLPATAWG Trigger: TCCCCACGCGGTAGCGGGCAGAGACCTCGTGGAATGGCTGGTTCAGAAGTTCTGCATCTTGGAGGATGAAGCCCTGCACCTGGGCACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS GCA 90 bp | CAAGGTGGGGACCTGGGCCTGTCCGCCAAAGCGCAGCTCCTCACATaGCTCCCAGAAGCTGAGGTTTTCCGCACTGAATTCCTTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGGDLGLSAKAQLLT*LPEAEVFRTEFLLE Trigger: CTCCAGAAGGAATTCAGTGCGGAAAACCTCAGCTTCTGGGAGGCATGTGAGGAGCTGCGCTTTGGCGGACAGGCCCAGGTCCCCACCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS TCA 90 bp | TCCAAAAGTAGGGTGTCTGGAACCTGTAGGGGGTCTCGTCCGGCCTaGGTGTCAGGTCTCGGGACTCACGCAGTGGGTAGATGTAGCCGT | + |
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Preference number: 5 (lower is better) Translates to: SKSRVSGTCRGSRPA*VSGLGTHAVGRCSR Trigger: ACGGCTACATCTACCCACTGCGTGAGTCCCGAGACCTGACACTCAGGCCGGACGAGACCCCCTACAGGTTCCAGACACCCTACTTTTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS GCA 90 bp | ATCAGAAGGCGCTGGCTCCGCATCTTCACGCCTTGGTCAGGGTCCTaGATACTCACGACTACCCGCTCCATCTTGCTGAGATGCGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IRRRWLRIFTPWSGS*ILTTTRSILLRCGL Trigger: GAGACCGCATCTCAGCAAGATGGAGCGGGTAGTCGTGAGTATGCAGGACCCTGACCAAGGCGTGAAGATGCGGAGCCAGCGCCTTCTGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS GCA 90 bp | GGGACTCACGCAGTGGGTAGATGTAGCCGTGCTGCGCCAGGAGTGTaGCCAGGTGCAGGGCTTCATCCTCCAAGATGCAGAACTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GTHAVGRCSRAAPGV*PGAGLHPPRCRTSE Trigger: TTCAGAAGTTCTGCATCTTGGAGGATGAAGCCCTGCACCTGGGCACACTCCTGGCGCAGCACGGCTACATCTACCCACTGCGTGAGTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CAA 90 bp | CTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAGACTTGCCCGATTCTGTGATCCAGGGGTaGCTGGGCAGACACCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LDRKTGCQGCQLDKDLPDSVIQG*LGRHPD Trigger: GTCAGGGTGTCTGCCCAGCAACCCCTGGATCACAGA...ATCGGGCAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS CCA 90 bp | GGAATGACAGTGATCAGAAGGCGCTGGCTCCGCATCTTCACGCCTTaGTCAGGGTCCTGCATACTCACGACTACCCGCTCCATCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GMTVIRRRWLRIFTP*SGSCILTTTRSILL Trigger: CAGCAAGATGGAGCGGGTAGTCGTGAGTATGCAGGACCCTGACCAAGGCGTGAAGATGCGGAGCCAGCGCCTTCTGATCACTGTCATTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CAA 90 bp | GAGGAGGATTATACAGTGGAGGAGCCTTCCTGCATGGGGTGGCATGGCCAGAGACCGCATCTTCACGCCTaGGTCAGGGTCCTGCATACT | + |
|
Preference number: 5 (lower is better) Translates to: EEDYTVEEPSCMGWHGQRPHLHA*VRVLHT Trigger: AGTATGCAGGACCCTGACCAAGGCGTGAAGATGCGG...TCTCTGGCCATGCCACCCCATGCAGGAAGGCTCCTCCACTGTATAATCCTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CAA 90 bp | CTGGACAGGAAGACTGGATGCCAGGGCTGCCAGCTTGACAAAGACTTGCCCGATCCGCATCTTCACGCCTaGGTCAGGGTCCTGCATACT | + |
|
Preference number: 5 (lower is better) Translates to: LDRKTGCQGCQLDKDLPDPHLHA*VRVLHT Trigger: AGTATGCAGGACCCTGACCAAGGCGTGAAGATGCGG...ATCGGGCAAGTCTTTGTCAAGCTGGCAGCCCTGGCATCCAGTCTTCCTGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS GCA 90 bp | GTACGCCTCGAGGCAGGCAGAGGACTTCACCCGGTTCCTGCCCAGTaGCTTCCTGAAGCACTCGATCTCACACTTATAGAAATCCGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VRLEAGRGLHPVPAQ*LPEALDLTLIEIRA Trigger: AGCTCGGATTTCTATAAGTGTGAGATCGAGTGCTTCAGGAAGGCACTGGGCAGGAACCGGGTGAAGTCCTCTGCCTGCCTCGAGGCGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CAA 90 bp | GAGACTAGAGAGCAGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATGTCCTGCTGTCAATGTaGATCCAGCGGGCAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ETREQPYWELHGRRPHLYVLLSM*IQRAAP Trigger: TGGAGCTGCCCGCTGGATCAACATTGACAGCAGGAC...ATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCTGCTCTCTAGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CAA 90 bp | TATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGGTGGGGTCCTGCTGTCAATGTaGATCCAGCGGGCAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YWELHGRRPHLYFYLWGGVLLSM*IQRAAP Trigger: TGGAGCTGCCCGCTGGATCAACATTGACAGCAGGAC...CCCACCCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CAA 90 bp | AGCCCTATTGGGAGCTGCATGGCAGGAGGCCCCATCTTTATTTCTACCTCTGGGAGATCCCATGCATGGTaGATCTTCTTGTGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPIGSCMAGGPIFISTSGRSHAW*IFLCSR Trigger: CCTGCTGCACAAGAAGATCAACCATGCATGGGATCT...CCCAGAGGTAGAAATAAAGATGGGGCCTCCTGCCATGCAGCTCCCAATAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS CCA 90 bp | CAGAGGCTTCCGCAAGAATGGAAATGGCCAGCGCTTTGTCTCCAGTaGAATCACAGCTTCCTCCAGCAGGCCCTTGTATATGTCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: QRLPQEWKWPALCLQ*NHSFLQQALVYVRL Trigger: AAGTCTGACATATACAAGGGCCTGCTGGAGGAAGCTGTGATTCCACTGGAGACAAAGCGCTGGCCATTTCCATTCTTGCGGAAGCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS-3UTR CAA 90 bp | ATGAGAACTGGGAGCCCTGTAGTCAGGACAGCAGTGTGCTGTCGCCTTTCTAGAAGATCCCATGCATGGTaGATCTTCTTGTGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MRTGSPVVRTAVCCRLSRRSHAW*IFLCSR Trigger: CCTGCTGCACAAGAAGATCAACCATGCATGGGATCT...TCTAGAAAGGCGACAGCACACTGCTGTCCTGACTACAGGGCTCCCAGTTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS CCA 72 bp | GTCCGGCCTGAGTGTCAGGTCTCGGGACTCACGCAGTaGGTAGATGTAGCCGTGCTGCGCCAGGAGTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRPECQVSGLTQ*VDVAVLRQECA Trigger: GGCACACTCCTGGCGCAGCACGGCTACATCTACCCACTGCGTGAGTCCCGAGACCTGACACTCAGGCCGGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS CCA 72 bp | ACCAGCCATTCCACGAGGTCTCTGCCCGCTACCGCGTaGGGAATGACAGTGATCAGAAGGCGCTGGCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TSHSTRSLPATA*GMTVIRRRWLR Trigger: GCGGAGCCAGCGCCTTCTGATCACTGTCATTCCCCACGCGGTAGCGGGCAGAGACCTCGTGGAATGGCTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS CAA 90 bp | ACGCCTTGGTCAGGGTCCTGCATACTCACGACTACCCGCTCCATCTaGCTGAGATGCGGTCTCTGCATTCGGGAGCACCCGCCGTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: TPWSGSCILTTTRSI*LRCGLCIREHPPWG Trigger: ACCCCACGGCGGGTGCTCCCGAATGCAGAGACCGCATCTCAGCAAGATGGAGCGGGTAGTCGTGAGTATGCAGGACCCTGACCAAGGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS TCA 72 bp | AGGGTGTCTGGAACCTGTAGGGGGTCTCGTCCGGCCTaGGTGTCAGGTCTCGGGACTCACGCAGTGGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: RVSGTCRGSRPA*VSGLGTHAVGR Trigger: TCTACCCACTGCGTGAGTCCCGAGACCTGACACTCAGGCCGGACGAGACCCCCTACAGGTTCCAGACACCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS CCA 72 bp | GCTACCGCGTGGGGAATGACAGTGATCAGAAGGCGCTaGCTCCGCATCTTCACGCCTTGGTCAGGGTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ATAWGMTVIRRR*LRIFTPWSGSC Trigger: GCAGGACCCTGACCAAGGCGTGAAGATGCGGAGCCAGCGCCTTCTGATCACTGTCATTCCCCACGCGGTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS TCA 72 bp | GGTCCTGCATACTCACGACTACCCGCTCCATCTTGCTaGGATGCGGTCTCTGCATTCGGGAGCACCCGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: GPAYSRLPAPSC*DAVSAFGSTRR Trigger: ACGGCGGGTGCTCCCGAATGCAGAGACCGCATCTCAGCAAGATGGAGCGGGTAGTCGTGAGTATGCAGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS GCA 72 bp | TGCATACTCACGACTACCCGCTCCATCTTGCTGAGATaGGGTCTCTGCATTCGGGAGCACCCGCCGTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: CILTTTRSILLR*GLCIREHPPWG Trigger: ACCCCACGGCGGGTGCTCCCGAATGCAGAGACCGCATCTCAGCAAGATGGAGCGGGTAGTCGTGAGTATGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS GCA 72 bp | GCAGTGGGTAGATGTAGCCGTGCTGCGCCAGGAGTGTaGCCAGGTGCAGGGCTTCATCCTCCAAGATGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AVGRCSRAAPGV*PGAGLHPPRCR Trigger: TCTGCATCTTGGAGGATGAAGCCCTGCACCTGGGCACACTCCTGGCGCAGCACGGCTACATCTACCCACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS CCA 72 bp | GTGATCAGAAGGCGCTGGCTCCGCATCTTCACGCCTTaGTCAGGGTCCTGCATACTCACGACTACCCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VIRRRWLRIFTP*SGSCILTTTRS Trigger: GGAGCGGGTAGTCGTGAGTATGCAGGACCCTGACCAAGGCGTGAAGATGCGGAGCCAGCGCCTTCTGATCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS GCA 72 bp | CGCTGGCTCCGCATCTTCACGCCTTGGTCAGGGTCCTaGATACTCACGACTACCCGCTCCATCTTGCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RWLRIFTPWSGS*ILTTTRSILLR Trigger: TCTCAGCAAGATGGAGCGGGTAGTCGTGAGTATGCAGGACCCTGACCAAGGCGTGAAGATGCGGAGCCAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS CAA 72 bp | TCAGGGTCCTGCATACTCACGACTACCCGCTCCATCTaGCTGAGATGCGGTCTCTGCATTCGGGAGCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: SGSCILTTTRSI*LRCGLCIREHP Trigger: CGGGTGCTCCCGAATGCAGAGACCGCATCTCAGCAAGATGGAGCGGGTAGTCGTGAGTATGCAGGACCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS CAA 72 bp | AGTGATCAGAAGGCGCTGGCTCCGCATCTTCACGCCTaGGTCAGGGTCCTGCATACTCACGACTACCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SDQKALAPHLHA*VRVLHTHDYPL Trigger: GAGCGGGTAGTCGTGAGTATGCAGGACCCTGACCAAGGCGTGAAGATGCGGAGCCAGCGCCTTCTGATCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS CAA 90 bp | GGGAATGACAGTGATCAGAAGGCGCTGGCTCCGCATCTTCACGCCTaGGTCAGGGTCCTGCATACTCACGACTACCCGCTCCATCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GNDSDQKALAPHLHA*VRVLHTHDYPLHLA Trigger: AGCAAGATGGAGCGGGTAGTCGTGAGTATGCAGGACCCTGACCAAGGCGTGAAGATGCGGAGCCAGCGCCTTCTGATCACTGTCATTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS GCA 72 bp | CGCCGCTGCTTAGCAGCCCGCAGCTGCTCTCGAGCCTaGATCAATACCAGATCCCATGCATGGTTGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RRCLAARSCSRA*INTRSHAWLIF Trigger: GAAGATCAACCATGCATGGGATCTGGTATTGATGCAGGCTCGAGAGCAGCTGCGGGCTGCTAAGCAGCGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS GCA 72 bp | GGAGTGTGCCCAGGTGCAGGGCTTCATCCTCCAAGATaGAGAACTTCTGAACCAGCCATTCCACGAGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GVCPGAGLHPPR*RTSEPAIPRGL Trigger: GAGACCTCGTGGAATGGCTGGTTCAGAAGTTCTGCATCTTGGAGGATGAAGCCCTGCACCTGGGCACACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS CCA 72 bp | TCCCAGAAGCTGAGGTTTTCCGCACTGAATTCCTTCTaGAGAAAGTCCATGAAGTGGGCACGCCCCACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SQKLRFSALNSF*RKSMKWARPTG Trigger: CCCCGTGGGGCGTGCCCACTTCATGGACTTTCTCCAGAAGGAATTCAGTGCGGAAAACCTCAGCTTCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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| CDS GCA 72 bp | GAGGCAGGCAGAGGACTTCACCCGGTTCCTGCCCAGTaGCTTCCTGAAGCACTCGATCTCACACTTATAGAA | + |
|
Preference number: 6 (lower is better) Translates to: EAGRGLHPVPAQ*LPEALDLTLIE Trigger: TTCTATAAGTGTGAGATCGAGTGCTTCAGGAAGGCACTGGGCAGGAACCGGGTGAAGTCCTCTGCCTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025020.6 ENSMUST00000122058.8 |
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