Pregenerated sensors for RGS10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030844Ensembl transcript IDs: ENSMUST00000033133.12, ENSMUST00000145739.3
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TACCCATTGAAAAATTTAAATCTTCCCTGGAGTCTGGTACCAGTGAGAATGATCAACAGGTGTCTGAGGTaGAGCAATGAGGGGGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: YPLKNLNLPWSLVPVRMINRCLR*SNEGEK Trigger: TTTTTCCCCCTCATTGCTCCACCTCAGACACCTGTT...GATCATTCTCACTGGTACCAGACTCCAGGGAAGATTTAAATTTTTCAATGGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145739.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAAATGTTTATGTTCCTTCTGAATGCTGGCCTCTTGGACAGCTCTCTTTTAAAAATTTAAATCTTCCCTaGAGTCTGGTACCAGTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KNVYVPSECWPLGQLSFKNLNLP*SLVPVR Trigger: TCTCACTGGTACCAGACTCCAGGGAAGATTTAAATT...TTTAAAAGAGAGCTGTCCAAGAGGCCAGCATTCAGAAGGAACATAAACATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000145739.3 |
||
| 3UTR CCA 72 bp | AACACAAGGTACCCATTGAAAAATTTAAATCTTCCCTaGAGTCTGGTACCAGTGAGAATGATCTGGGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: NTRYPLKNLNLP*SLVPVRMIWAP Trigger: GGGTGCCCAGATCATTCTCACTGGTACCAGACTCCAGGGAAGATTTAAATTTTTCAATGGGTACCTTGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145739.3 |
||
| 3UTR CCA 72 bp | ACTTTAATCAGGATTGAAAGGCTGAGTGTCCAGTATTaGCAGAATCTCATGTGTTTTTGTGAACTGACACTT | + |
|
Preference number: 3 (lower is better) Translates to: TLIRIERLSVQY*QNLMCFCELTL Trigger: AAGTGTCAGTTCACAAAAACACATGAGATTCTGCCAATACTGGACACTCAGCCTTTCAATCCTGATTAAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR GCA 90 bp | GAAGGTCTAGCACACTCCAGTCCTCAAACACAACAAAGAAATGACAGCCTGTACACGGCGGCCGCTTCCTaGTCAGTCGGCTCACGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EGLAHSSPQTQQRNDSLYTAAAS*SVGSRR Trigger: GCGCCGTGAGCCGACTGAGCAGGAAGCGGCCGCCGT...GTACAGGCTGTCATTTCTTTGTTGTGTTTGAGGACTGGAGTGTGCTAGACCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR TCA 90 bp | AGCTTCACGAACACTTTAATCAGGATTGAAAGGCTGAGTGTCCAGTATTGGCAGCGCTTAGCTGCGGTCTaGGCATCCGGGGGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFTNTLIRIERLSVQYWQRLAAV*ASGGSS Trigger: AGAAGAGCCCCCGGATGCTCAGACCGCAGCTAAGCG...CTGCCAATACTGGACACTCAGCCTTTCAATCCTGATTAAAGTGTTCGTGAAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR GCA 90 bp | AAAAATGTTTATGTTCCTTCTGAATGCTGGCCTCTTGGACAGCTCTCTTTTAAAACGGCGGCCGCTTCCTaGTCAGTCGGCTCACGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KNVYVPSECWPLGQLSFKTAAAS*SVGSRR Trigger: GCGCCGTGAGCCGACTGAGCAGGAAGCGGCCGCCGT...TTTAAAAGAGAGCTGTCCAAGAGGCCAGCATTCAGAAGGAACATAAACATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000145739.3 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGAAGGTCTAGCACACTCCAGTCCTCAAACACAACAAAGAAATGACAGCAACTCCCTGAATCTCTaGACCCCTTCTGGGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QREGLAHSSPQTQQRNDSNSLNL*TPSGSS Trigger: GGAAGACCCAGAAGGGGTGCAGAGATTCAGGGAGTT...GCTGTCATTTCTTTGTTGTGTTTGAGGACTGGAGTGTGCTAGACCTTCCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGTCCTCAAACACAACAAAGAAATGACAGCCTGTACAGTCCTAAGAGTCGTGCTCTTAAGGCTCTaGTGGCCGCTGCTTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPVLKHNKEMTACTVLRVVLLRL*WPLLEL Trigger: GAGCTCAAGCAGCGGCCACCAGAGCCTTAAGAGCAC...GACTCTTAGGACTGTACAGGCTGTCATTTCTTTGTTGTGTTTGAGGACTGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR TCA 90 bp | AAATTTAAATCTTCCCTGGAGTCTGGTACCAGTGAGAATGATCTGGGCACCCCCTCTTCAGAAACTCCCTaGATCTCTGCACCCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KFKSSLESGTSENDLGTPSSETP*ISAPLL Trigger: CAGAAGGGGTGCAGAGATTCAGGGAGTTTCTGAAGA...GGGGGTGCCCAGATCATTCTCACTGGTACCAGACTCCAGGGAAGATTTAAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145739.3 |
||
| CDS-3UTR TCA 90 bp | AGCTTCACGAACACTTTAATCAGGATTGAAAGGCTGAGTGTCCAGTATTGGCAGCCAGAATCTTTTCAGTaGGCCGAGACTGCCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFTNTLIRIERLSVQYWQPESFQ*AETAPP Trigger: TGGAGGGGCAGTCTCGGCTCACTGAAAAGATTCTGG...CTGCCAATACTGGACACTCAGCCTTTCAATCCTGATTAAAGTGTTCGTGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR GCA 90 bp | ACACATATCCAGAGGGAAGGTCTAGCACACTCCAGTCCTCAAACACAACAAAGATCCTTGGCCTTTTCCTaGATCTGCTTCCTGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: THIQREGLAHSSPQTQQRSLAFS*ICFLSS Trigger: GGAGGACAGGAAGCAGATGCAGGAAAAGGCCAAGGA...TCTTTGTTGTGTTTGAGGACTGGAGTGTGCTAGACCTTCCCTCTGGATATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR GCA 90 bp | AGCTTCACGAACACTTTAATCAGGATTGAAAGGCTGAGTGTCCAGTATTGGCAGTCAGTGAGCCGAGACTaGCCCTCCACGTTGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFTNTLIRIERLSVQYWQSVSRD*PSTLTC Trigger: ACAAGTCAACGTGGAGGGGCAGTCTCGGCTCACTGA...CTGCCAATACTGGACACTCAGCCTTTCAATCCTGATTAAAGTGTTCGTGAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR TCA 90 bp | TCCAGTCCTCAAACACAACAAAGAAATGACAGCCTGTACAGTCCTAAGAGTCCATCTTCAGAAACTCCCTaGATCTCTGCACCCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPQTQQRNDSLYSPKSPSSETP*ISAPLL Trigger: CAGAAGGGGTGCAGAGATTCAGGGAGTTTCTGAAGA...TGGACTCTTAGGACTGTACAGGCTGTCATTTCTTTGTTGTGTTTGAGGACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR CCA 90 bp | TACCCATTGAAAAATTTAAATCTTCCCTGGAGTCTGGTACCAGTGAGAATGATCGTGCTCTTAAGGCTCTaGTGGCCGCTGCTTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YPLKNLNLPWSLVPVRMIVLLRL*WPLLEL Trigger: GAGCTCAAGCAGCGGCCACCAGAGCCTTAAGAGCAC...GATCATTCTCACTGGTACCAGACTCCAGGGAAGATTTAAATTTTTCAATGGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145739.3 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGTCCTCAAACACAACAAAGAAATGACAGCCTGTACAGTCCTAAGAGTCTCTCTGCACCCCTTCTaGGTCTTCCAGAAGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPVLKHNKEMTACTVLRVSLHPF*VFQKIL Trigger: GAGAATCTTCTGGAAGACCCAGAAGGGGTGCAGAGA...GACTCTTAGGACTGTACAGGCTGTCATTTCTTTGTTGTGTTTGAGGACTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR TCA 90 bp | TGTAGCTTCACGAACACTTTAATCAGGATTGAAAGGCTGAGTGTCCAGTATTGGCTCCACGTTGACTTGTaGAGAGGCCTTATTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: CSFTNTLIRIERLSVQYWLHVDL*RGLIGQ Trigger: CTGTCCAATAAGGCCTCTTCACAAGTCAACGTGGAG...CCAATACTGGACACTCAGCCTTTCAATCCTGATTAAAGTGTTCGTGAAGCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR GCA 90 bp | ATTGAAAAATTTAAATCTTCCCTGGAGTCTGGTACCAGTGAGAATGATCTGGGCAACTCCCTGAATCTCTaGACCCCTTCTGGGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IEKFKSSLESGTSENDLGNSLNL*TPSGSS Trigger: GGAAGACCCAGAAGGGGTGCAGAGATTCAGGGAGTT...GCCCAGATCATTCTCACTGGTACCAGACTCCAGGGAAGATTTAAATTTTTCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145739.3 |
||
| CDS-3UTR GCA 90 bp | TACCCATTGAAAAATTTAAATCTTCCCTGGAGTCTGGTACCAGTGAGAATGATCAGGCAGAGAGGTACCTaGTTCCTGTCCTCCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YPLKNLNLPWSLVPVRMIRQRGT*FLSSVF Trigger: GAAAACGGAGGACAGGAAGCAGGTACCTCTCTGCCT...GATCATTCTCACTGGTACCAGACTCCAGGGAAGATTTAAATTTTTCAATGGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145739.3 |
||
| CDS-3UTR CCA 90 bp | GAAGGTCTAGCACACTCCAGTCCTCAAACACAACAAAGAAATGACAGCCTGTACTTGAAGATCTGGTCCTaGAGCTTTTGGAACATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGLAHSSPQTQQRNDSLYLKIWS*SFWNIR Trigger: TCTGATGTTCCAAAAGCTCCAGGACCAGATCTTCAA...GTACAGGCTGTCATTTCTTTGTTGTGTTTGAGGACTGGAGTGTGCTAGACCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR CCA 90 bp | TCCAGTCCTCAAACACAACAAAGAAATGACAGCCTGTACAGTCCTAAGAGTCCACTTCCTCAGTTCGCTTaGGTTTCAGAAACAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSPQTQQRNDSLYSPKSPLPQFA*VSETSQ Trigger: CTGACTTGTTTCTGAAACCCAAGCGAACTGAGGAAG...TGGACTCTTAGGACTGTACAGGCTGTCATTTCTTTGTTGTGTTTGAGGACTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGTCCTCAAACACAACAAAGAAATGACAGCCTGTACAGTCCTAAGAGTCATGAGATTGAAGATCTaGTCCTGGAGCTTTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TPVLKHNKEMTACTVLRVMRLKI*SWSFWN Trigger: GTTCCAAAAGCTCCAGGACCAGATCTTCAATCTCAT...GACTCTTAGGACTGTACAGGCTGTCATTTCTTTGTTGTGTTTGAGGACTGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR TCA 90 bp | ACTCCAGTCCTCAAACACAACAAAGAAATGACAGCCTGTACAGTCCTAAGAGTCAGACATTCTCTTCGCTaGATTCCTTCTTCAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: TPVLKHNKEMTACTVLRVRHSLR*IPSSET Trigger: AGTTTCTGAAGAAGGAATTCAGCGAAGAGAATGTCT...GACTCTTAGGACTGTACAGGCTGTCATTTCTTTGTTGTGTTTGAGGACTGGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR CCA 90 bp | AAAAATGTTTATGTTCCTTCTGAATGCTGGCCTCTTGGACAGCTCTCTTTTAAATCTCTGCACCCCTTCTaGGTCTTCCAGAAGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KNVYVPSECWPLGQLSFKSLHPF*VFQKIL Trigger: GAGAATCTTCTGGAAGACCCAGAAGGGGTGCAGAGA...TTTAAAAGAGAGCTGTCCAAGAGGCCAGCATTCAGAAGGAACATAAACATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000145739.3 |
||
| CDS-3UTR TCA 90 bp | AACACAAGGTACCCATTGAAAAATTTAAATCTTCCCTGGAGTCTGGTACCAGTGAGACATTCTCTTCGCTaGATTCCTTCTTCAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: NTRYPLKNLNLPWSLVPVRHSLR*IPSSET Trigger: AGTTTCTGAAGAAGGAATTCAGCGAAGAGAATGTCT...CACTGGTACCAGACTCCAGGGAAGATTTAAATTTTTCAATGGGTACCTTGTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145739.3 |
||
| CDS GCA 90 bp | ATCAGAGGGTGTGGCTCTTCCAGAATCTTTTCAGTGAGCCGAGACTaGCCCTCCACGTTGACTTGTGAAGAGGCCTTATTGGACAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IRGCGSSRIFSVSRD*PSTLTCEEALLDRK Trigger: CTTCCTGTCCAATAAGGCCTCTTCACAAGTCAACGTGGAGGGGCAGTCTCGGCTCACTGAAAAGATTCTGGAAGAGCCACACCCTCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR CAA 90 bp | TCCAGTCCTCAAACACAACAAAGAAATGACAGCCTGTACAGTCCTAAGAGTCCATCTGGTGGCCGCTGCTaGAGCTCCCATCTCCGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSPQTQQRNDSLYSPKSPSGGRC*SSHLRH Trigger: ATGACGGAGATGGGAGCTCAAGCAGCGGCCACCAGA...TGGACTCTTAGGACTGTACAGGCTGTCATTTCTTTGTTGTGTTTGAGGACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR CAA 90 bp | TCCAGTCCTCAAACACAACAAAGAAATGACAGCCTGTACAGTCCTAAGAGTCCAAGGGAGGATGCCCACTaGGCTGTGCTCTTAAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSPQTQQRNDSLYSPKSPREDAH*AVLLRL Trigger: GAGCCTTAAGAGCACAGCCAAGTGGGCATCCTCCCT...TGGACTCTTAGGACTGTACAGGCTGTCATTTCTTTGTTGTGTTTGAGGACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR CAA 90 bp | GAAGGTCTAGCACACTCCAGTCCTCAAACACAACAAAGAAATGACAGCCTGTACGACTGCCCCTCCACGTaGACTTGTGAAGAGGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: EGLAHSSPQTQQRNDSLYDCPST*TCEEAL Trigger: TAAGGCCTCTTCACAAGTCAACGTGGAGGGGCAGTC...GTACAGGCTGTCATTTCTTTGTTGTGTTTGAGGACTGGAGTGTGCTAGACCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR CAA 90 bp | TACCCATTGAAAAATTTAAATCTTCCCTGGAGTCTGGTACCAGTGAGAATGATCTCTGGTGGCCGCTGCTaGAGCTCCCATCTCCGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: YPLKNLNLPWSLVPVRMISGGRC*SSHLRH Trigger: ATGACGGAGATGGGAGCTCAAGCAGCGGCCACCAGA...GATCATTCTCACTGGTACCAGACTCCAGGGAAGATTTAAATTTTTCAATGGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145739.3 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGAAGGTCTAGCACACTCCAGTCCTCAAACACAACAAAGAAATGACAGCCTGTCCTCCGTTTTCTaGAAATCTTCACACGCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: QREGLAHSSPQTQQRNDSLSSVF*KSSHAS Trigger: GCTAGCGTGTGAAGATTTCAAGAAAACGGAGGACAG...GCTGTCATTTCTTTGTTGTGTTTGAGGACTGGAGTGTGCTAGACCTTCCCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS-3UTR CAA 90 bp | TACCCATTGAAAAATTTAAATCTTCCCTGGAGTCTGGTACCAGTGAGAATGATCAGGGAGGATGCCCACTaGGCTGTGCTCTTAAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YPLKNLNLPWSLVPVRMIREDAH*AVLLRL Trigger: GAGCCTTAAGAGCACAGCCAAGTGGGCATCCTCCCT...GATCATTCTCACTGGTACCAGACTCCAGGGAAGATTTAAATTTTTCAATGGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145739.3 |
||
| CDS-3UTR CAA 90 bp | AGCTTCACGAACACTTTAATCAGGATTGAAAGGCTGAGTGTCCAGTATTGGCAGTCTTCCTCAGTTCGCTaGGGTTTCAGAAACAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFTNTLIRIERLSVQYWQSSSVR*GFRNKS Trigger: TGACTTGTTTCTGAAACCCAAGCGAACTGAGGAAGA...CTGCCAATACTGGACACTCAGCCTTTCAATCCTGATTAAAGTGTTCGTGAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS CCA 72 bp | CTCTGGTGGCCGCTGCTTGAGCTCCCATCTCCGTCATaGATATCAGACGGCGGCCGCTTCCTGCTCAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LWWPLLELPSPS*ISDGGRFLLSR Trigger: CCGACTGAGCAGGAAGCGGCCGCCGTCTGATATCCATGACGGAGATGGGAGCTCAAGCAGCGGCCACCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033133.12 ENSMUST00000145739.3 |
||
| CDS GCA 72 bp | TGTGGCTCTTCCAGAATCTTTTCAGTGAGCCGAGACTaGCCCTCCACGTTGACTTGTGAAGAGGCCTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: CGSSRIFSVSRD*PSTLTCEEALL Trigger: CAATAAGGCCTCTTCACAAGTCAACGTGGAGGGGCAGTCTCGGCTCACTGAAAAGATTCTGGAAGAGCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||
| CDS CAA 72 bp | AGAATCTTTTCAGTGAGCCGAGACTGCCCCTCCACGTaGACTTGTGAAGAGGCCTTATTGGACAGGAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RIFSVSRDCPST*TCEEALLDRKV Trigger: GACCTTCCTGTCCAATAAGGCCTCTTCACAAGTCAACGTGGAGGGGCAGTCTCGGCTCACTGAAAAGATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033133.12 |
||