Pregenerated sensors for RGS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026358Ensembl transcript IDs: ENSMUST00000167317.8, ENSMUST00000167812.2, ENSMUST00000169409.3, ENSMUST00000172388.8, ENSMUST00000185714.2, ENSMUST00000189061.7
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGTACTTCCACTGGGCCTCCTGAGCCACCCAAGTAGGCCAGGTTaGTCTGGCAGGCAGTCTCATTGGCATGTTCCTTCTGTCCTTGAT | + |
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Preference number: 1 (lower is better) Translates to: SVLPLGLLSHPSRPG*SGRQSHWHVPSVLD Trigger: ATCAAGGACAGAAGGAACATGCCAATGAGACTGCCTGCCAGACCAACCTGGCCTACTTGGGTGGCTCAGGAGGCCCAGTGGAAGTACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR TCA 90 bp | TACATGTTGTTCCTCACCATTGCTGCTCCCTGGTGTCTGAGAGCTTaGAGTGAAAACATGTACAGCAATTCCTTCTGGTCTGTGGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: YMLFLTIAAPWCLRA*SENMYSNSFWSVGS Trigger: AGAACCCACAGACCAGAAGGAATTGCTGTACATGTTTTCACTTCAAGCTCTCAGACACCAGGGAGCAGCAATGGTGAGGAACAACATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| 3UTR TCA 90 bp | AGGTTGGTCTGGCAGGCAGTCTCATTGGCATGTTCCTTCTGTCCTTaGTACCATCTTTTAATTCCTGTCAGCCAGGAATCACTCACTTTA | + |
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Preference number: 1 (lower is better) Translates to: RLVWQAVSLACSFCP*YHLLIPVSQESLTL Trigger: TAAAGTGAGTGATTCCTGGCTGACAGGAATTAAAAGATGGTATCAAGGACAGAAGGAACATGCCAATGAGACTGCCTGCCAGACCAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 |
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| 3UTR TCA 90 bp | ACCTGTTATACATGTTGTTCCTCACCATTGCTGCTCCCTGGTGTCTaGGAGCTTGAAGTGAAAACATGTACAGCAATTCCTTCTGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: TCYTCCSSPLLLPGV*ELEVKTCTAIPSGL Trigger: CAGACCAGAAGGAATTGCTGTACATGTTTTCACTTCAAGCTCTCAGACACCAGGGAGCAGCAATGGTGAGGAACAACATGTATAACAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| 3UTR CCA 90 bp | TTCAGAAGGGTCTCAATTTCTTACTTAGAGGACATAAGAATTCAGTaGCTTAGGGAACTCCTCTGGTCAGTGGGTGGCAGTGTTTCACTG | + |
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Preference number: 1 (lower is better) Translates to: FRRVSISYLEDIRIQ*LRELLWSVGGSVSL Trigger: CAGTGAAACACTGCCACCCACTGACCAGAGGAGTTCCCTAAGCCACTGAATTCTTATGTCCTCTAAGTAAGAAATTGAGACCCTTCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| 3UTR GCA 90 bp | GCCTGTAGTTCATCCTCATCAGATTTGAAGATGACTGCCTTGCAGTaGATTATAGAAAGGCTTTATGGGAAGTTACTCAATCTGGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: ACSSSSSDLKMTALQ*IIERLYGKLLNLGL Trigger: CAGGCCCAGATTGAGTAACTTCCCATAAAGCCTTTCTATAATGCACTGCAAGGCAGTCATCTTCAAATCTGATGAGGATGAACTACAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| 3UTR CCA 90 bp | ATACATGTCTTTGGACTTGGCCGATTTCATCCCAGATTCCAGATGTaGGATCATCGATCTCAGGTATGTTTTCACGTCCATTCCACTACA | + |
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Preference number: 1 (lower is better) Translates to: IHVFGLGRFHPRFQM*DHRSQVCFHVHSTT Trigger: TGTAGTGGAATGGACGTGAAAACATACCTGAGATCGATGATCCCACATCTGGAATCTGGGATGAAATCGGCCAAGTCCAAAGACATGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167812.2 |
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| 3UTR CCA 90 bp | AACACATTCTACACAACAGCACGCAGCATACATGTCTGCTGCCCTTaGAGTTTACAGCACAGAGTAATCCGTCTCATACACATTATTCAC | + |
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Preference number: 1 (lower is better) Translates to: NTFYTTARSIHVCCP*SLQHRVIRLIHIIH Trigger: GTGAATAATGTGTATGAGACGGATTACTCTGTGCTGTAAACTCCAAGGGCAGCAGACATGTATGCTGCGTGCTGTTGTGTAGAATGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR CCA 90 bp | AAGTATGTCTTTGGACTTGGCCGATTTCATCCCAGATTCCAGATGTaGGATCATCGATCTCAGGTATGTTTTCACGTCCATTCCACTACA | + |
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Preference number: 1 (lower is better) Translates to: KYVFGLGRFHPRFQM*DHRSQVCFHVHSTT Trigger: TGTAGTGGAATGGACGTGAAAACATACCTGAGATCGATGATCCCACATCTGGAATCTGGGATGAAATCGGCCAAGTCCAAAGACATACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 |
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| 3UTR CCA 90 bp | TCTTACTTAGAGGACATAAGAATTCAGTGGCTTAGGGAACTCCTCTaGTCAGTGGGTGGCAGTGTTTCACTGTATAAGGTGCATAGACTA | + |
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Preference number: 1 (lower is better) Translates to: SYLEDIRIQWLRELL*SVGGSVSLYKVHRL Trigger: TAGTCTATGCACCTTATACAGTGAAACACTGCCACCCACTGACCAGAGGAGTTCCCTAAGCCACTGAATTCTTATGTCCTCTAAGTAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| 3UTR GCA 90 bp | ATTTGCGCTATATACTTTTGGACTGGTTATCCAAGGGAAGGAGATTaGAAGAGTTCAACACATTCTACACAACAGCACGCAGCATACATG | + |
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Preference number: 1 (lower is better) Translates to: ICAIYFWTGYPREGD*KSSTHSTQQHAAYM Trigger: CATGTATGCTGCGTGCTGTTGTGTAGAATGTGTTGAACTCTTGCAATCTCCTTCCCTTGGATAACCAGTCCAAAAGTATATAGCGCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR TCA 90 bp | TCATGCACATACCAAGACTTGTGCAAAATTAGGTGGATGATCCAGTaGGATATTAAGCTAGGAAGGATACATGAACGGACAATGGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: SCTYQDLCKIRWMIQ*DIKLGRIHERTMGV Trigger: AACTCCCATTGTCCGTTCATGTATCCTTCCTAGCTTAATATCTCACTGGATCATCCACCTAATTTTGCACAAGTCTTGGTATGTGCATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| 3UTR TCA 90 bp | AGGAAGATGGATAGAATTTGTGTTGGTGTGACTAGAGATAATGAATaGCATGGATTTACCAAGTTTTTCTTACCCTGTGGCCAGCAACAG | + |
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Preference number: 1 (lower is better) Translates to: RKMDRICVGVTRDNE*HGFTKFFLPCGQQQ Trigger: CTGTTGCTGGCCACAGGGTAAGAAAAACTTGGTAAATCCATGTCATTCATTATCTCTAGTCACACCAACACAAATTCTATCCATCTTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| 3UTR TCA 90 bp | TGTATGTTTTCAGGGCTGATCATTTGGTATTGGATAACCAATTGGTaGGCTCTTCTCTGGATAAGAGTATTTCTCTCACTTTTAGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: CMFSGLIIWYWITNW*ALLWIRVFLSLLAF Trigger: GAAAGCTAAAAGTGAGAGAAATACTCTTATCCAGAGAAGAGCTCACCAATTGGTTATCCAATACCAAATGATCAGCCCTGAAAACATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000189061.7 |
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| 3UTR CCA 90 bp | CATGTCAATAATAGCAACTGTTATTTGCGCTATATACTTTTGGACTaGTTATCCAAGGGAAGGAGATTGCAAGAGTTCAACACATTCTAC | + |
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Preference number: 1 (lower is better) Translates to: HVNNSNCYLRYILLD*LSKGRRLQEFNTFY Trigger: GTAGAATGTGTTGAACTCTTGCAATCTCCTTCCCTTGGATAACCAGTCCAAAAGTATATAGCGCAAATAACAGTTGCTATTATTGACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR CCA 90 bp | CTCTTCATGTCAATAATAGCAACTGTTATTTGCGCTATATACTTTTaGACTGGTTATCCAAGGGAAGGAGATTGCAAGAGTTCAACACAT | + |
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Preference number: 1 (lower is better) Translates to: LFMSIIATVICAIYF*TGYPREGDCKSSTH Trigger: ATGTGTTGAACTCTTGCAATCTCCTTCCCTTGGATAACCAGTCCAAAAGTATATAGCGCAAATAACAGTTGCTATTATTGACATGAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR-3UTR CCA 90 bp | CTTCCACTGGGCCTCCTGAGCCACCCAAGTAGGCCAGGTTGGTCTGGCAGGCAGCAGAAAGTATGTCTTTaGACTTGGCCGATTTCATCC | + |
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Preference number: 2 (lower is better) Translates to: LPLGLLSHPSRPGWSGRQQKVCL*TWPISS Trigger: GGATGAAATCGGCCAAGTCCAAAGACATACTTTCTG...CTGCCTGCCAGACCAACCTGGCCTACTTGGGTGGCTCAGGAGGCCCAGTGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCCACCCAAGTAGGCCAGGTTGGTCTGGCAGGCAGTCTCATTGGCATGTTGTATGTCTTTGGACTTaGCCGATTTCATCCCAGATT | + |
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Preference number: 2 (lower is better) Translates to: LSHPSRPGWSGRQSHWHVVCLWT*PISSQI Trigger: AATCTGGGATGAAATCGGCCAAGTCCAAAGACATAC...AACATGCCAATGAGACTGCCTGCCAGACCAACCTGGCCTACTTGGGTGGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTGCCTTGTTCTTCTTGTTCATGCTTCCTCAAGTCTCTACCTGGATACCTCCCAGATTCCAGATGTaGGATCATCGATCTCAGGTA | + |
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Preference number: 2 (lower is better) Translates to: GLALFFLFMLPQVSTWIPPRFQM*DHRSQV Trigger: TACCTGAGATCGATGATCCCACATCTGGAATCTGGG...AGGTATCCAGGTAGAGACTTGAGGAAGCATGAACAAGAAGAACAAGGCAAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 |
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| 3UTR-3UTR GCA 90 bp | GTTGGTGTTTTAATCTTCTTGGCTGTCGATTCTCGAGTATGGAAGTCAATATTGTTCACTCAAGTCCCCTaGCCATCCCCCTGTCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: VGVLIFLAVDSRVWKSILFTQVP*PSPCLN Trigger: GTTGAGACAGGGGGATGGGCAGGGGACTTGAGTGAA...CAATATTGACTTCCATACTCGAGAATCGACAGCCAAGAAGATTAAAACACCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167812.2 ENSMUST00000172388.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTGCCTTGTTCTTCTTGTTCATGCTTCCTCAAGTCTCTACCTGGATACCTACATGTCTTTGGACTTaGCCGATTTCATCCCAGATT | + |
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Preference number: 2 (lower is better) Translates to: GLALFFLFMLPQVSTWIPTCLWT*PISSQI Trigger: AATCTGGGATGAAATCGGCCAAGTCCAAAGACATGT...AGGTATCCAGGTAGAGACTTGAGGAAGCATGAACAAGAAGAACAAGGCAAGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167812.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCTGGCAGGCAGTCTCATTGGCATGTTCCTTCTGTCCTTGATACCATCTTTTGTACATACATGTCTTTaGACTTGGCCGATTTCATCC | + |
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Preference number: 2 (lower is better) Translates to: GLAGSLIGMFLLSLIPSFVHTCL*TWPISS Trigger: GGATGAAATCGGCCAAGTCCAAAGACATGTATGTAC...AAAAGATGGTATCAAGGACAGAAGGAACATGCCAATGAGACTGCCTGCCAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167812.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTGTGTTGCCAGAGTCAGCTGACCTTCCCATTTTGGAGGGTTGTTTGAATTTTGACCTGTCTGGTTaGCAAGGAGTTTTTCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: VSVLPESADLPILEGCLNFDLSG*QGVFPE Trigger: CTCTGGAAAAACTCCTTGCCAACCAGACAGGTCAAA...ATTCAAACAACCCTCCAAAATGGGAAGGTCAGCTGACTCTGGCAACACAGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 |
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| 3UTR CAA 90 bp | CAACACATTCTACACAACAGCACGCAGCATACATGTCTGCTGCCCTaGGAGTTTACAGCACAGAGTAATCCGTCTCATACACATTATTCA | + |
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Preference number: 2 (lower is better) Translates to: QHILHNSTQHTCLLP*EFTAQSNPSHTHYS Trigger: TGAATAATGTGTATGAGACGGATTACTCTGTGCTGTAAACTCCAAGGGCAGCAGACATGTATGCTGCGTGCTGTTGTGTAGAATGTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR-3UTR GCA 90 bp | AATAGCAACTGTTATTTGCGCTATATACTTTTGGACTGGTTATCCAAGGGAAGGGTTGTTCCTCACCATTaGTGCTCCCTGGTGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: NSNCYLRYILLDWLSKGRVVPHH*CSLVSE Trigger: CTCAGACACCAGGGAGCAGCAATGGTGAGGAACAAC...CCTTCCCTTGGATAACCAGTCCAAAAGTATATAGCGCAAATAACAGTTGCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| 3UTR-3UTR CCA 90 bp | TTGCGCTATATACTTTTGGACTGGTTATCCAAGGGAAGGAGATTGCAAGAGTTCCCCAGATTCCAGATGTaGGATCATCGATCTCAGGTA | + |
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Preference number: 2 (lower is better) Translates to: LRYILLDWLSKGRRLQEFPRFQM*DHRSQV Trigger: TACCTGAGATCGATGATCCCACATCTGGAATCTGGG...GAACTCTTGCAATCTCCTTCCCTTGGATAACCAGTCCAAAAGTATATAGCGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 |
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| 3UTR-3UTR CCA 90 bp | TGCGCTATATACTTTTGGACTGGTTATCCAAGGGAAGGAGATTGCAAGAGTTCACATGTCTGCTGCCCTTaGAGTTTACAGCACAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: CAIYFWTGYPREGDCKSSHVCCP*SLQHRV Trigger: TACTCTGTGCTGTAAACTCCAAGGGCAGCAGACATG...TGAACTCTTGCAATCTCCTTCCCTTGGATAACCAGTCCAAAAGTATATAGCGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR CAA 90 bp | GACAGTACCATAGTATCTCCTTCCATTGGCCTTGCCTTGTTCTTCTaGTTCATGCTTCCTCAAGTCTCTACCTGGATACCTTGTGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: DSTIVSPSIGLALFF*FMLPQVSTWIPCVN Trigger: ATTAACACAAGGTATCCAGGTAGAGACTTGAGGAAGCATGAACAAGAAGAACAAGGCAAGGCCAATGGAAGGAGATACTATGGTACTGTC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR CAA 90 bp | GTATTTCATGACAGTACCATAGTATCTCCTTCCATTGGCCTTGCCTaGTTCTTCTTGTTCATGCTTCCTCAAGTCTCTACCTGGATACCT | + |
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Preference number: 2 (lower is better) Translates to: VFHDSTIVSPSIGLA*FFLFMLPQVSTWIP Trigger: AGGTATCCAGGTAGAGACTTGAGGAAGCATGAACAAGAAGAACAAGGCAAGGCCAATGGAAGGAGATACTATGGTACTGTCATGAAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR-3UTR TCA 90 bp | TACCTTGTGTTAATCCTTTCTGAGTCATCTGTACTTCCACTGGGCCTCCTGAGCAGTTCCCCTTATCTATaGAAAGAACATGAAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: YLVLILSESSVLPLGLLSSSPYL*KEHEAN Trigger: GTTTGCTTCATGTTCTTTTCATAGATAAGGGGAACT...GCTCAGGAGGCCCAGTGGAAGTACAGATGACTCAGAAAGGATTAACACAAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 |
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| 3UTR-3UTR CCA 90 bp | AATAGCAACTGTTATTTGCGCTATATACTTTTGGACTGGTTATCCAAGGGAAGGGGCAGGCAGTCTCATTaGCATGTTCCTTCTGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: NSNCYLRYILLDWLSKGRGRQSH*HVPSVL Trigger: AAGGACAGAAGGAACATGCCAATGAGACTGCCTGCC...CCTTCCCTTGGATAACCAGTCCAAAAGTATATAGCGCAAATAACAGTTGCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR CAA 90 bp | ACAATACCCTGTGTTTATATGGCCTGTAGTTCATCCTCATCAGATTaGAAGATGACTGCCTTGCAGTGCATTATAGAAAGGCTTTATGGG | + |
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Preference number: 2 (lower is better) Translates to: TIPCVYMACSSSSSD*KMTALQCIIERLYG Trigger: CCCATAAAGCCTTTCTATAATGCACTGCAAGGCAGTCATCTTCAAATCTGATGAGGATGAACTACAGGCCATATAAACACAGGGTATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| 3UTR-3UTR TCA 90 bp | GCACAGAGTAATCCGTCTCATACACATTATTCACAGTTTCTGTGTTGCCAGAGTTCTGAGAGCTTGAAGTaGAAACATGTACAGCAATTC | + |
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Preference number: 2 (lower is better) Translates to: AQSNPSHTHYSQFLCCQSSESLK*KHVQQF Trigger: GAATTGCTGTACATGTTTTCACTTCAAGCTCTCAGA...ACTCTGGCAACACAGAAACTGTGAATAATGTGTATGAGACGGATTACTCTGTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| 3UTR-3UTR CCA 90 bp | TTTGCGCTATATACTTTTGGACTGGTTATCCAAGGGAAGGAGATTGCAAGAGTTAGTATCTCCTTCCATTaGCCTTGCCTTGTTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: FALYTFGLVIQGKEIARVSISFH*PCLVLL Trigger: AAGAAGAACAAGGCAAGGCCAATGGAAGGAGATACT...AACTCTTGCAATCTCCTTCCCTTGGATAACCAGTCCAAAAGTATATAGCGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGGACTGGTTATCCAAGGGAAGGAGATTGCAAGAGTTCAACACATTCTACAGTTCCCCTTATCTATaGAAAGAACATGAAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: LLDWLSKGRRLQEFNTFYSSPYL*KEHEAN Trigger: GTTTGCTTCATGTTCTTTTCATAGATAAGGGGAACT...GTAGAATGTGTTGAACTCTTGCAATCTCCTTCCCTTGGATAACCAGTCCAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGAGTTTACAGCACAGAGTAATCCGTCTCATACACATTATTCACAGTTTCTGTCCTTCCATTGGCCTTaGCTTGTTCTTCTTGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LEFTAQSNPSHTHYSQFLSFHWP*LVLLVH Trigger: ATGAACAAGAAGAACAAGGCAAGGCCAATGGAAGGA...CAGAAACTGTGAATAATGTGTATGAGACGGATTACTCTGTGCTGTAAACTCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR-3UTR CCA 90 bp | TTGCGCTATATACTTTTGGACTGGTTATCCAAGGGAAGGAGATTGCAAGAGTTCTCATTGGCTCTAATATaGGCTAATCTTGTTTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LRYILLDWLSKGRRLQEFSLALI*ANLVWL Trigger: AAGCCAAACAAGATTAGCCCATATTAGAGCCAATGA...GAACTCTTGCAATCTCCTTCCCTTGGATAACCAGTCCAAAAGTATATAGCGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167812.2 ENSMUST00000172388.8 |
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| 3UTR CAA 90 bp | AGTGTGTACAATGGTACTTGTATGTATGTTTTCAGGGCTGATCATTaGGTATTGGATAACCAATTGGTGAGCTCTTCTCTGGATAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: SVYNGTCMYVFRADH*VLDNQLVSSSLDKS Trigger: ACTCTTATCCAGAGAAGAGCTCACCAATTGGTTATCCAATACCAAATGATCAGCCCTGAAAACATACATACAAGTACCATTGTACACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000189061.7 |
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| 3UTR-3UTR TCA 90 bp | TTTGCGCTATATACTTTTGGACTGGTTATCCAAGGGAAGGAGATTGCAAGAGTTTTGTTTCACAGCATCTaGATGCACAAATGCTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: FALYTFGLVIQGKEIARVLFHSI*MHKCFV Trigger: TACAAAGCATTTGTGCATTCAGATGCTGTGAAACAA...AACTCTTGCAATCTCCTTCCCTTGGATAACCAGTCCAAAAGTATATAGCGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGCGCTATATACTTTTGGACTGGTTATCCAAGGGAAGGAGATTGCAAGAGTTTTCTCTGCTTTGTTATaGAAAAGATCAGTCTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: FALYTFGLVIQGKEIARVFSALL*KRSVSV Trigger: AACAGAGACTGATCTTTTGCATAACAAAGCAGAGAA...AACTCTTGCAATCTCCTTCCCTTGGATAACCAGTCCAAAAGTATATAGCGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGAGTTTACAGCACAGAGTAATCCGTCTCATACACATTATTCACAGTTTCTGTTCCCCTTTCAAAGATaGCACCATTTCTCATCAATT | + |
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Preference number: 2 (lower is better) Translates to: LEFTAQSNPSHTHYSQFLFPFQR*HHFSSI Trigger: AATTGATGAGAAATGGTGGCATCTTTGAAAGGGGAA...CAGAAACTGTGAATAATGTGTATGAGACGGATTACTCTGTGCTGTAAACTCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000189061.7 |
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| 3UTR-3UTR CCA 90 bp | ATAATAGCAACTGTTATTTGCGCTATATACTTTTGGACTGGTTATCCAAGGGAAGTATGTCTTTGGACTTaGCCGATTTCATCCCAGATT | + |
|
Preference number: 2 (lower is better) Translates to: IIATVICAIYFWTGYPREVCLWT*PISSQI Trigger: AATCTGGGATGAAATCGGCCAAGTCCAAAGACATAC...TTCCCTTGGATAACCAGTCCAAAAGTATATAGCGCAAATAACAGTTGCTATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 |
||
| 3UTR CAA 90 bp | TACAATGGTACTTGTATGTATGTTTTCAGGGCTGATCATTTGGTATaGGATAACCAATTGGTGAGCTCTTCTCTGGATAAGAGTATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: YNGTCMYVFRADHLV*DNQLVSSSLDKSIS Trigger: AGAAATACTCTTATCCAGAGAAGAGCTCACCAATTGGTTATCCAATACCAAATGATCAGCCCTGAAAACATACATACAAGTACCATTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000189061.7 |
||
| 3UTR CAA 90 bp | AGCCTCAGGCAATTAAATCATCTTCAGGAATACTTGATGTATCCTTaGAAATACAGATTCCCATACTGTAGTAGTTGCAGATTCTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: SLRQLNHLQEYLMYP*KYRFPYCSSCRFSC Trigger: ACATGAGAATCTGCAACTACTACAGTATGGGAATCTGTATTTCAAAGGATACATCAAGTATTCCTGAAGATGATTTAATTGCCTGAGGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR-3UTR CCA 90 bp | TTTACAGCACAGAGTAATCCGTCTCATACACATTATTCACAGTTTCTGTGTTGCGTCGATTCTCGAGTATaGAAGTCAATATTGATTTGT | + |
|
Preference number: 2 (lower is better) Translates to: FTAQSNPSHTHYSQFLCCVDSRV*KSILIC Trigger: ACAAATCAATATTGACTTCCATACTCGAGAATCGAC...GCAACACAGAAACTGTGAATAATGTGTATGAGACGGATTACTCTGTGCTGTAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 ENSMUST00000172388.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTCCTGTCAGCCAGGAATCACTCACTTTAAAGTATTTGCCTGAAGGTCATTTAGTCGATTCTCGAGTATaGAAGTCAATATTGATTTGT | + |
|
Preference number: 2 (lower is better) Translates to: IPVSQESLTLKYLPEGHLVDSRV*KSILIC Trigger: ACAAATCAATATTGACTTCCATACTCGAGAATCGAC...TAAATGACCTTCAGGCAAATACTTTAAAGTGAGTGATTCCTGGCTGACAGGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 ENSMUST00000172388.8 |
||
| 3UTR CAA 90 bp | TTGGCTCTACTTCACACGTTATTACATGTTTATGTAGATCATATCTaGCATTTCATATTACCTGGAATCCATGCATCCAGGATGATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LALLHTLLHVYVDHI*HFILPGIHASRMMF Trigger: AAACATCATCCTGGATGCATGGATTCCAGGTAATATGAAATGCAAGATATGATCTACATAAACATGTAATAACGTGTGAAGTAGAGCCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR-3UTR GCA 90 bp | ATAATAGCAACTGTTATTTGCGCTATATACTTTTGGACTGGTTATCCAAGGGAATTCTCTGCTTTGTTATaGAAAAGATCAGTCTCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: IIATVICAIYFWTGYPREFSALL*KRSVSV Trigger: AACAGAGACTGATCTTTTGCATAACAAAGCAGAGAA...TTCCCTTGGATAACCAGTCCAAAAGTATATAGCGCAAATAACAGTTGCTATTAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 |
||
| 3UTR CCA 72 bp | CCACTGGGCCTCCTGAGCCACCCAAGTAGGCCAGGTTaGTCTGGCAGGCAGTCTCATTGGCATGTTCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PLGLLSHPSRPG*SGRQSHWHVPS Trigger: AGAAGGAACATGCCAATGAGACTGCCTGCCAGACCAACCTGGCCTACTTGGGTGGCTCAGGAGGCCCAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
||
| 3UTR TCA 72 bp | TCCTTTCTGAGTCATCTGTACTTCCACTGGGCCTCCTaGGCCACCCAAGTAGGCCAGGTTGGTCTGGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SFLSHLYFHWAS*ATQVGQVGLAG Trigger: GCCTGCCAGACCAACCTGGCCTACTTGGGTGGCTCAGGAGGCCCAGTGGAAGTACAGATGACTCAGAAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
||
| 3UTR TCA 72 bp | CACCATTGCTGCTCCCTGGTGTCTGAGAGCTTGAAGTaGAAACATGTACAGCAATTCCTTCTGGTCTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HHCCSLVSESLK*KHVQQFLLVCG Trigger: CCCACAGACCAGAAGGAATTGCTGTACATGTTTTCACTTCAAGCTCTCAGACACCAGGGAGCAGCAATGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR GCA 72 bp | ACATTCTACACAACAGCACGCAGCATACATGTCTGCTaGCCTTGGAGTTTACAGCACAGAGTAATCCGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TFYTTARSIHVC*PWSLQHRVIRL Trigger: GAGACGGATTACTCTGTGCTGTAAACTCCAAGGGCAGCAGACATGTATGCTGCGTGCTGTTGTGTAGAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
||
| 3UTR CCA 72 bp | TACACAACAGCACGCAGCATACATGTCTGCTGCCCTTaGAGTTTACAGCACAGAGTAATCCGTCTCATACAC | + |
|
Preference number: 3 (lower is better) Translates to: YTTARSIHVCCP*SLQHRVIRLIH Trigger: GTGTATGAGACGGATTACTCTGTGCTGTAAACTCCAAGGGCAGCAGACATGTATGCTGCGTGCTGTTGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
||
| 3UTR-3UTR CAA 90 bp | TACCTTGTGTTAATCCTTTCTGAGTCATCTGTACTTCCACTGGGCCTCCTGAGCGCTGATCATTTGGTATaGGATAACCAATTGGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: YLVLILSESSVLPLGLLSADHLV*DNQLVS Trigger: GCTCACCAATTGGTTATCCAATACCAAATGATCAGC...GCTCAGGAGGCCCAGTGGAAGTACAGATGACTCAGAAAGGATTAACACAAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000189061.7 |
||
| 3UTR TCA 72 bp | ACATGTTGTTCCTCACCATTGCTGCTCCCTGGTGTCTaGGAGCTTGAAGTGAAAACATGTACAGCAATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TCCSSPLLLPGV*ELEVKTCTAIP Trigger: AGGAATTGCTGTACATGTTTTCACTTCAAGCTCTCAGACACCAGGGAGCAGCAATGGTGAGGAACAACATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR GCA 72 bp | TCTGGTCAGTGGGTGGCAGTGTTTCACTGTATAAGGTaGATAGACTATATGGGCCTAATCATGATCCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: SGQWVAVFHCIR*IDYMGLIMIHP Trigger: AGGATGGATCATGATTAGGCCCATATAGTCTATGCACCTTATACAGTGAAACACTGCCACCCACTGACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR CCA 72 bp | TTTGGACTTGGCCGATTTCATCCCAGATTCCAGATGTaGGATCATCGATCTCAGGTATGTTTTCACGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: FGLGRFHPRFQM*DHRSQVCFHVH Trigger: ATGGACGTGAAAACATACCTGAGATCGATGATCCCACATCTGGAATCTGGGATGAAATCGGCCAAGTCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 |
||
| 3UTR CCA 72 bp | GTCTCAATTTCTTACTTAGAGGACATAAGAATTCAGTaGCTTAGGGAACTCCTCTGGTCAGTGGGTGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VSISYLEDIRIQ*LRELLWSVGGS Trigger: ACTGCCACCCACTGACCAGAGGAGTTCCCTAAGCCACTGAATTCTTATGTCCTCTAAGTAAGAAATTGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR-3UTR CAA 90 bp | TACCTTGTGTTAATCCTTTCTGAGTCATCTGTACTTCCACTGGGCCTCCTGAGCTGTGTACAATGGTACTaGTATGTATGTTTTCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: YLVLILSESSVLPLGLLSCVQWY*YVCFQG Trigger: GCCCTGAAAACATACATACAAGTACCATTGTACACA...GCTCAGGAGGCCCAGTGGAAGTACAGATGACTCAGAAAGGATTAACACAAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000189061.7 |
||
| 3UTR CCA 72 bp | GCATTACTTCTTCAGCAGAAAGTATGTCTTTGGACTTaGCCGATTTCATCCCAGATTCCAGATGTGGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: ALLLQQKVCLWT*PISSQIPDVGS Trigger: TGATCCCACATCTGGAATCTGGGATGAAATCGGCCAAGTCCAAAGACATACTTTCTGCTGAAGAAGTAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 |
||
| 3UTR-3UTR CAA 90 bp | GCACAGAGTAATCCGTCTCATACACATTATTCACAGTTTCTGTGTTGCCAGAGTCTTGCCTTGTTCTTCTaGTTCATGCTTCCTCAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: AQSNPSHTHYSQFLCCQSLALFF*FMLPQV Trigger: GACTTGAGGAAGCATGAACAAGAAGAACAAGGCAAG...ACTCTGGCAACACAGAAACTGTGAATAATGTGTATGAGACGGATTACTCTGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
||
| 3UTR-3UTR CAA 90 bp | AACTTTACAACCTACTTAGACAAATACCAGCAGCATTCGCTTGATGTCCTGTGTCTCCTTCCATTGGCCTaGCCTTGTTCTTCTTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: NFTTYLDKYQQHSLDVLCLLPLA*PCSSCS Trigger: TGAACAAGAAGAACAAGGCAAGGCCAATGGAAGGAG...ACACAGGACATCAAGCGAATGCTGCTGGTATTTGTCTAAGTAGGTTGTAAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR TCA 72 bp | TACAACCTACTTAGACAAATACCAGCAGCATTCGCTTaGTGTCCTGTGTGTCGTTGGATTGTTGTACTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: YNLLRQIPAAFA*CPVCRWIVVLF Trigger: GAACAGTACAACAATCCAACGACACACAGGACATCAAGCGAATGCTGCTGGTATTTGTCTAAGTAGGTTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR-3UTR CAA 90 bp | AACTTTACAACCTACTTAGACAAATACCAGCAGCATTCGCTTGATGTCCTGTGTCTTGCCTTGTTCTTCTaGTTCATGCTTCCTCAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: NFTTYLDKYQQHSLDVLCLALFF*FMLPQV Trigger: GACTTGAGGAAGCATGAACAAGAAGAACAAGGCAAG...ACACAGGACATCAAGCGAATGCTGCTGGTATTTGTCTAAGTAGGTTGTAAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR TCA 72 bp | GGAAGGATACATGAACGGACAATGGGAGTTGTACAGTaGATGTCACCATGGGAGGGATTTTTAACTATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GRIHERTMGVVQ*MSPWEGFLTIE Trigger: TTCAATAGTTAAAAATCCCTCCCATGGTGACATTCACTGTACAACTCCCATTGTCCGTTCATGTATCCTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR GCA 72 bp | ATATACTTTTGGACTGGTTATCCAAGGGAAGGAGATTaGAAGAGTTCAACACATTCTACACAACAGCACGCA | + |
|
Preference number: 3 (lower is better) Translates to: IYFWTGYPREGD*KSSTHSTQQHA Trigger: TGCGTGCTGTTGTGTAGAATGTGTTGAACTCTTGCAATCTCCTTCCCTTGGATAACCAGTCCAAAAGTATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
||
| 3UTR GCA 72 bp | TATCCTTTGAAATACAGATTCCCATACTGTAGTAGTTaGAGATTCTCATGTGATCAGTCTGGGATAGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: YPLKYRFPYCSS*RFSCDQSGIGP Trigger: TGGCCCTATCCCAGACTGATCACATGAGAATCTGCAACTACTACAGTATGGGAATCTGTATTTCAAAGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR CCA 72 bp | GATGACTGCCTTGCAGTGCATTATAGAAAGGCTTTATaGGAAGTTACTCAATCTGGGCCTGGAAAATTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: DDCLAVHYRKAL*EVTQSGPGKFD Trigger: ATCAAATTTTCCAGGCCCAGATTGAGTAACTTCCCATAAAGCCTTTCTATAATGCACTGCAAGGCAGTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR-3UTR CAA 90 bp | AATAGCAACTGTTATTTGCGCTATATACTTTTGGACTGGTTATCCAAGGGAAGGTCCATTGGCCTTGCCTaGTTCTTCTTGTTCATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: NSNCYLRYILLDWLSKGRSIGLA*FFLFML Trigger: AAGCATGAACAAGAAGAACAAGGCAAGGCCAATGGA...CCTTCCCTTGGATAACCAGTCCAAAAGTATATAGCGCAAATAACAGTTGCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
||
| 3UTR-3UTR CAA 90 bp | TATATACTTTTGGACTGGTTATCCAAGGGAAGGAGATTGCAAGAGTTCAACACAGCAGAAAGTATGTCTTaGGACTTGGCCGATTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: YILLDWLSKGRRLQEFNTAESMS*DLADFI Trigger: GATGAAATCGGCCAAGTCCAAAGACATACTTTCTGC...TGTGTTGAACTCTTGCAATCTCCTTCCCTTGGATAACCAGTCCAAAAGTATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAGTTTACAGCACAGAGTAATCCGTCTCATACACATTATTCACAGTTTCTGGTTCTTTGTGTTGGGTaGAGACATGATGGGCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LEFTAQSNPSHTHYSQFLVLCVG*RHDGLF Trigger: GAAAAGCCCATCATGTCTCAACCCAACACAAAGAAC...CAGAAACTGTGAATAATGTGTATGAGACGGATTACTCTGTGCTGTAAACTCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000189061.7 |
||
| 3UTR-3UTR CAA 90 bp | AACTTTACAACCTACTTAGACAAATACCAGCAGCATTCGCTTGATGTCCTGTGTGCTGATCATTTGGTATaGGATAACCAATTGGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: NFTTYLDKYQQHSLDVLCADHLV*DNQLVS Trigger: GCTCACCAATTGGTTATCCAATACCAAATGATCAGC...ACACAGGACATCAAGCGAATGCTGCTGGTATTTGTCTAAGTAGGTTGTAAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR TCA 72 bp | TCAGGGCTGATCATTTGGTATTGGATAACCAATTGGTaGGCTCTTCTCTGGATAAGAGTATTTCTCTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: SGLIIWYWITNW*ALLWIRVFLSL Trigger: AAGTGAGAGAAATACTCTTATCCAGAGAAGAGCTCACCAATTGGTTATCCAATACCAAATGATCAGCCCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000189061.7 |
||
| 3UTR GCA 72 bp | TCATCCTCATCAGATTTGAAGATGACTGCCTTGCAGTaGATTATAGAAAGGCTTTATGGGAAGTTACTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SSSSDLKMTALQ*IIERLYGKLLN Trigger: ATTGAGTAACTTCCCATAAAGCCTTTCTATAATGCACTGCAAGGCAGTCATCTTCAAATCTGATGAGGATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR CCA 72 bp | TCAATAATAGCAACTGTTATTTGCGCTATATACTTTTaGACTGGTTATCCAAGGGAAGGAGATTGCAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SIIATVICAIYF*TGYPREGDCKS Trigger: ACTCTTGCAATCTCCTTCCCTTGGATAACCAGTCCAAAAGTATATAGCGCAAATAACAGTTGCTATTATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
||
| 3UTR TCA 72 bp | ACAGTAGAAGGAAGATGGATAGAATTTGTGTTGGTGTaGCTAGAGATAATGAATGACATGGATTTACCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TVEGRWIEFVLV*LEIMNDMDLPS Trigger: ACTTGGTAAATCCATGTCATTCATTATCTCTAGTCACACCAACACAAATTCTATCCATCTTCCTTCTACTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR CCA 72 bp | GTCGTTGGATTGTTGTACTGTTCACTTGTAAGGGTCTaGTTTCTATTTAACATGACAGTAGCACTTAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: VVGLLYCSLVRV*FLFNMTVALKI Trigger: TATTTTAAGTGCTACTGTCATGTTAAATAGAAACCAGACCCTTACAAGTGAACAGTACAACAATCCAACGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR TCA 72 bp | AAAGTAGAAGTTAATAAAGACTTGGAGATAGTGAAGTaGAGTTTTAGTCATGCACATACCAAGACTTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: KVEVNKDLEIVK*SFSHAHTKTCA Trigger: TGCACAAGTCTTGGTATGTGCATGACTAAAACTTCACTTCACTATCTCCAAGTCTTTATTAACTTCTACTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| CDS-3UTR CCA 90 bp | GGCCTCCTGAGCCACCCAAGTAGGCCAGGTTGGTCTGGCAGGCAGTCTCATTGGCCCAGATTCCAGATGTaGGATCATCGATCTCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLLSHPSRPGWSGRQSHWPRFQM*DHRSQV Trigger: TACCTGAGATCGATGATCCCACATCTGGAATCTGGG...CCAATGAGACTGCCTGCCAGACCAACCTGGCCTACTTGGGTGGCTCAGGAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172388.8 ENSMUST00000189061.7 |
||
| CDS-3UTR TCA 90 bp | CTTCCACTGGGCCTCCTGAGCCACCCAAGTAGGCCAGGTTGGTCTGGCAGGCAGAGTTTTTCCAGAGACTaGGACCACTGCATTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLGLLSHPSRPGWSGRQSFSRD*DHCITS Trigger: AGAAGTAATGCAGTGGTCTCAGTCTCTGGAAAAACT...CTGCCTGCCAGACCAACCTGGCCTACTTGGGTGGCTCAGGAGGCCCAGTGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| CDS-3UTR CCA 90 bp | GGCCTCCTGAGCCACCCAAGTAGGCCAGGTTGGTCTGGCAGGCAGTCTCATTGGGTACATACATGTCTTTaGACTTGGCCGATTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GLLSHPSRPGWSGRQSHWVHTCL*TWPISS Trigger: GGATGAAATCGGCCAAGTCCAAAGACATGTATGTAC...CCAATGAGACTGCCTGCCAGACCAACCTGGCCTACTTGGGTGGCTCAGGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172388.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGCAGGCAGTCTCATTGGCATGTTCCTTCTGTCCTTGATACCATCTTTTTGTTCAACCTTGGCATaGAGATGGCTGCCGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLAGSLIGMFLLSLIPSFCSTLA*RWLPLS Trigger: TGAGAGCGGCAGCCATCTCCATGCCAAGGTTGAACA...AAAAGATGGTATCAAGGACAGAAGGAACATGCCAATGAGACTGCCTGCCAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
||
| CDS-3UTR CCA 90 bp | GGCCAGGTTGGTCTGGCAGGCAGTCTCATTGGCATGTTCCTTCTGTCCTTGATATTTGACCTGTCTGGTTaGCAAGGAGTTTTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQVGLAGSLIGMFLLSLIFDLSG*QGVFPE Trigger: CTCTGGAAAAACTCCTTGCCAACCAGACAGGTCAAA...TATCAAGGACAGAAGGAACATGCCAATGAGACTGCCTGCCAGACCAACCTGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| 3UTR CAA 72 bp | CTACACAACAGCACGCAGCATACATGTCTGCTGCCCTaGGAGTTTACAGCACAGAGTAATCCGTCTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: LHNSTQHTCLLP*EFTAQSNPSHT Trigger: TGTATGAGACGGATTACTCTGTGCTGTAAACTCCAAGGGCAGCAGACATGTATGCTGCGTGCTGTTGTGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
||
| CDS-3UTR TCA 90 bp | GGCCTTGCCTTGTTCTTCTTGTTCATGCTTCCTCAAGTCTCTACCTGGATACCTCTTCCAAAGACATTTTaGCCTGTCTGGTTGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLALFFLFMLPQVSTWIPLPKTF*PVWLAR Trigger: CCTTGCCAACCAGACAGGTCAAAATGTCTTTGGAAG...AGGTATCCAGGTAGAGACTTGAGGAAGCATGAACAAGAAGAACAAGGCAAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGACTGGTTATCCAAGGGAAGGAGATTGCAAGAGTTCAACACATTCTACTGTTCAACCTTGGCATaGAGATGGCTGCCGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLDWLSKGRRLQEFNTFYCSTLA*RWLPLS Trigger: TGAGAGCGGCAGCCATCTCCATGCCAAGGTTGAACA...GTAGAATGTGTTGAACTCTTGCAATCTCCTTCCCTTGGATAACCAGTCCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
||
| CDS-3UTR CCA 90 bp | TCTCTACCTGGATACCTTGTGTTAATCCTTTCTGAGTCATCTGTACTTCCACTGTGTTCAACCTTGGCATaGAGATGGCTGCCGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPGYLVLILSESSVLPLCSTLA*RWLPLS Trigger: TGAGAGCGGCAGCCATCTCCATGCCAAGGTTGAACA...CAGTGGAAGTACAGATGACTCAGAAAGGATTAACACAAGGTATCCAGGTAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| CDS-3UTR CCA 90 bp | GGTTGGCAAGGAGTTTTTCCAGAGACTGAGACCACTGCATTACTTCTTCAGCAGACATGTCTTTGGACTTaGCCGATTTCATCCCAGATT | + |
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Preference number: 4 (lower is better) Translates to: GWQGVFPETETTALLLQQTCLWT*PISSQI Trigger: AATCTGGGATGAAATCGGCCAAGTCCAAAGACATGT...CTGCTGAAGAAGTAATGCAGTGGTCTCAGTCTCTGGAAAAACTCCTTGCCAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172388.8 |
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| 3UTR CAA 72 bp | GACAGTACCATAGTATCTCCTTCCATTGGCCTTGCCTaGTTCTTCTTGTTCATGCTTCCTCAAGTCTCTACC | + |
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Preference number: 4 (lower is better) Translates to: DSTIVSPSIGLA*FFLFMLPQVST Trigger: GGTAGAGACTTGAGGAAGCATGAACAAGAAGAACAAGGCAAGGCCAATGGAAGGAGATACTATGGTACTGTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR CAA 72 bp | CCAGAGTCAGCTGACCTTCCCATTTTGGAGGGTTGTTaGAATAGAGTCCCACTGTATTTCATGACAGTACCA | + |
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Preference number: 4 (lower is better) Translates to: PESADLPILEGC*NRVPLYFMTVP Trigger: TGGTACTGTCATGAAATACAGTGGGACTCTATTCAAACAACCCTCCAAAATGGGAAGGTCAGCTGACTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| CDS-3UTR CCA 90 bp | GTTTCTGTGTTGCCAGAGTCAGCTGACCTTCCCATTTTGGAGGGTTGTTTGAATGTATGTCTTTGGACTTaGCCGATTTCATCCCAGATT | + |
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Preference number: 4 (lower is better) Translates to: VSVLPESADLPILEGCLNVCLWT*PISSQI Trigger: AATCTGGGATGAAATCGGCCAAGTCCAAAGACATAC...ATTCAAACAACCCTCCAAAATGGGAAGGTCAGCTGACTCTGGCAACACAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| 3UTR CAA 72 bp | ATAGTATCTCCTTCCATTGGCCTTGCCTTGTTCTTCTaGTTCATGCTTCCTCAAGTCTCTACCTGGATACCT | + |
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Preference number: 4 (lower is better) Translates to: IVSPSIGLALFF*FMLPQVSTWIP Trigger: AGGTATCCAGGTAGAGACTTGAGGAAGCATGAACAAGAAGAACAAGGCAAGGCCAATGGAAGGAGATACTAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR CAA 72 bp | TGCATTACTTCTTCAGCAGAAAGTATGTCTTTGGACTaGGCCGATTTCATCCCAGATTCCAGATGTGGGATC | + |
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Preference number: 4 (lower is better) Translates to: CITSSAESMSLD*ADFIPDSRCGI Trigger: GATCCCACATCTGGAATCTGGGATGAAATCGGCCAAGTCCAAAGACATACTTTCTGCTGAAGAAGTAATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 |
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| CDS-3UTR TCA 90 bp | TGGTCTGGCAGGCAGTCTCATTGGCATGTTCCTTCTGTCCTTGATACCATCTTTTTGTTTCACAGCATCTaGATGCACAAATGCTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: WSGRQSHWHVPSVLDTIFLFHSI*MHKCFV Trigger: TACAAAGCATTTGTGCATTCAGATGCTGTGAAACAA...AAAGATGGTATCAAGGACAGAAGGAACATGCCAATGAGACTGCCTGCCAGACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| CDS-3UTR CCA 90 bp | GGTCTGGCAGGCAGTCTCATTGGCATGTTCCTTCTGTCCTTGATACCATCTTTTTTCTTTCGAATCCTTTaGGCTAGCAGAAAAGAACAT | + |
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Preference number: 4 (lower is better) Translates to: GLAGSLIGMFLLSLIPSFFFRIL*ASRKEH Trigger: ATGTTCTTTTCTGCTAGCCCAAAGGATTCGAAAGAA...AAAAGATGGTATCAAGGACAGAAGGAACATGCCAATGAGACTGCCTGCCAGACC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| CDS-3UTR CCA 90 bp | AGATTCCCATACTGTAGTAGTTGCAGATTCTCATGTGATCAGTCTGGGATAGGGCAGAAAGTATGTCTTTaGACTTGGCCGATTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: RFPYCSSCRFSCDQSGIGQKVCL*TWPISS Trigger: GGATGAAATCGGCCAAGTCCAAAGACATACTTTCTG...CCCTATCCCAGACTGATCACATGAGAATCTGCAACTACTACAGTATGGGAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| CDS-3UTR CCA 90 bp | TCAACACAACATGTTCAGTGTGTACAATGGTACTTGTATGTATGTTTTCAGGGCCCCAGATTCCAGATGTaGGATCATCGATCTCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: STQHVQCVQWYLYVCFQGPRFQM*DHRSQV Trigger: TACCTGAGATCGATGATCCCACATCTGGAATCTGGG...GCCCTGAAAACATACATACAAGTACCATTGTACACACTGAACATGTTGTGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| CDS-3UTR CCA 90 bp | TTGCCAGAGTCAGCTGACCTTCCCATTTTGGAGGGTTGTTTGAATAGAGTCCCATTGATTTCAGGAACCTaGGATAAGAATCTTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LPESADLPILEGCLNRVPLISGT*DKNLFP Trigger: TGGAAAAAGATTCTTATCCCAGGTTCCTGAAATCAA...TGGGACTCTATTCAAACAACCCTCCAAAATGGGAAGGTCAGCTGACTCTGGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| 3UTR CAA 72 bp | TATATACTTTTGGACTGGTTATCCAAGGGAAGGAGATaGCAAGAGTTCAACACATTCTACACAACAGCACGC | + |
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Preference number: 4 (lower is better) Translates to: YILLDWLSKGRR*QEFNTFYTTAR Trigger: GCGTGCTGTTGTGTAGAATGTGTTGAACTCTTGCAATCTCCTTCCCTTGGATAACCAGTCCAAAAGTATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR CAA 72 bp | CAGAAACTGAAAATCTTTTCAAACCTGTTATACATGTaGTTCCTCACCATTGCTGCTCCCTGGTGTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: QKLKIFSNLLYM*FLTIAAPWCLR Trigger: TCTCAGACACCAGGGAGCAGCAATGGTGAGGAACAACATGTATAACAGGTTTGAAAAGATTTTCAGTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| CDS-3UTR CCA 90 bp | GCACAGAGTAATCCGTCTCATACACATTATTCACAGTTTCTGTGTTGCCAGAGTTTCTTTCGAATCCTTTaGGCTAGCAGAAAAGAACAT | + |
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Preference number: 4 (lower is better) Translates to: AQSNPSHTHYSQFLCCQSFFRIL*ASRKEH Trigger: ATGTTCTTTTCTGCTAGCCCAAAGGATTCGAAAGAA...ACTCTGGCAACACAGAAACTGTGAATAATGTGTATGAGACGGATTACTCTGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| 3UTR CAA 72 bp | GTTTTCAGGGCTGATCATTTGGTATTGGATAACCAATaGGTGAGCTCTTCTCTGGATAAGAGTATTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: VFRADHLVLDNQ*VSSSLDKSISL Trigger: GAGAGAAATACTCTTATCCAGAGAAGAGCTCACCAATTGGTTATCCAATACCAAATGATCAGCCCTGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000189061.7 |
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| 3UTR CAA 72 bp | TGTGTTTATATGGCCTGTAGTTCATCCTCATCAGATTaGAAGATGACTGCCTTGCAGTGCATTATAGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: CVYMACSSSSSD*KMTALQCIIER Trigger: CCTTTCTATAATGCACTGCAAGGCAGTCATCTTCAAATCTGATGAGGATGAACTACAGGCCATATAAACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| 3UTR CAA 72 bp | AATGGTACTTGTATGTATGTTTTCAGGGCTGATCATTaGGTATTGGATAACCAATTGGTGAGCTCTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: NGTCMYVFRADH*VLDNQLVSSSL Trigger: CAGAGAAGAGCTCACCAATTGGTTATCCAATACCAAATGATCAGCCCTGAAAACATACATACAAGTACCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167317.8 ENSMUST00000189061.7 |
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| CDS-3UTR GCA 90 bp | GCTGATCATTTGGTATTGGATAACCAATTGGTGAGCTCTTCTCTGGATAAGAGTTTCTCTGCTTTGTTATaGAAAAGATCAGTCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: ADHLVLDNQLVSSSLDKSFSALL*KRSVSV Trigger: AACAGAGACTGATCTTTTGCATAACAAAGCAGAGAA...ACTCTTATCCAGAGAAGAGCTCACCAATTGGTTATCCAATACCAAATGATCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| CDS-3UTR CCA 90 bp | TTTACAGCACAGAGTAATCCGTCTCATACACATTATTCACAGTTTCTGTGTTGCAAAAGATGTGGGAGTTaGTGTTTTAATCTTCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: FTAQSNPSHTHYSQFLCCKRCGS*CFNLLG Trigger: GCCAAGAAGATTAAAACACCAACTCCCACATCTTTT...GCAACACAGAAACTGTGAATAATGTGTATGAGACGGATTACTCTGTGCTGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| CDS-3UTR CCA 90 bp | TTGGAGTTTACAGCACAGAGTAATCCGTCTCATACACATTATTCACAGTTTCTGGTCGATTCTCGAGTATaGAAGTCAATATTGATTTGT | + |
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Preference number: 4 (lower is better) Translates to: LEFTAQSNPSHTHYSQFLVDSRV*KSILIC Trigger: ACAAATCAATATTGACTTCCATACTCGAGAATCGAC...CAGAAACTGTGAATAATGTGTATGAGACGGATTACTCTGTGCTGTAAACTCCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| 3UTR CAA 72 bp | CTTCACACGTTATTACATGTTTATGTAGATCATATCTaGCATTTCATATTACCTGGAATCCATGCATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LHTLLHVYVDHI*HFILPGIHASR Trigger: CCTGGATGCATGGATTCCAGGTAATATGAAATGCAAGATATGATCTACATAAACATGTAATAACGTGTGAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| CDS-3UTR CAA 90 bp | GGCCTCCTGAGCCACCCAAGTAGGCCAGGTTGGTCTGGCAGGCAGTCTCATTGGGCATTTTGTTCAACCTaGGCATGGAGATGGCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: GLLSHPSRPGWSGRQSHWAFCST*AWRWLP Trigger: CGGCAGCCATCTCCATGCCAAGGTTGAACAAAATGC...CCAATGAGACTGCCTGCCAGACCAACCTGGCCTACTTGGGTGGCTCAGGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| CDS-3UTR CAA 90 bp | TCTGGTTGGCAAGGAGTTTTTCCAGAGACTGAGACCACTGCATTACTTCTTCAGGCATTTTGTTCAACCTaGGCATGGAGATGGCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: SGWQGVFPETETTALLLQAFCST*AWRWLP Trigger: CGGCAGCCATCTCCATGCCAAGGTTGAACAAAATGC...CTGAAGAAGTAATGCAGTGGTCTCAGTCTCTGGAAAAACTCCTTGCCAACCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 ENSMUST00000172388.8 |
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| CDS-3UTR CAA 90 bp | CCCACTGTATTTCATGACAGTACCATAGTATCTCCTTCCATTGGCCTTGCCTTGGCATTTTGTTCAACCTaGGCATGGAGATGGCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: PTVFHDSTIVSPSIGLALAFCST*AWRWLP Trigger: CGGCAGCCATCTCCATGCCAAGGTTGAACAAAATGC...CAAGGCAAGGCCAATGGAAGGAGATACTATGGTACTGTCATGAAATACAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| CDS-3UTR CAA 90 bp | GGCCAGGTTGGTCTGGCAGGCAGTCTCATTGGCATGTTCCTTCTGTCCTTGATAAGTACATACATGTCTTaGGACTTGGCCGATTTCATC | + |
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Preference number: 5 (lower is better) Translates to: GQVGLAGSLIGMFLLSLISTYMS*DLADFI Trigger: GATGAAATCGGCCAAGTCCAAAGACATGTATGTACT...TATCAAGGACAGAAGGAACATGCCAATGAGACTGCCTGCCAGACCAACCTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172388.8 |
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| CDS CCA 90 bp | GCTGTGTTCTTTCGAATCCTTTGGGCTAGCAGAAAAGAACATTCCTaGCATTTTGTTCAACCTTGGCATGGAGATGGCTGCCGCTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: AVFFRILWASRKEHS*HFVQPWHGDGCRSH Trigger: ATGAGAGCGGCAGCCATCTCCATGCCAAGGTTGAACAAAATGCCAGGAATGTTCTTTTCTGCTAGCCCAAAGGATTCGAAAGAACACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000185714.2 ENSMUST00000189061.7 |
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| CDS-3UTR CAA 90 bp | GCACAGAGTAATCCGTCTCATACACATTATTCACAGTTTCTGTGTTGCCAGAGTGCATTTTGTTCAACCTaGGCATGGAGATGGCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: AQSNPSHTHYSQFLCCQSAFCST*AWRWLP Trigger: CGGCAGCCATCTCCATGCCAAGGTTGAACAAAATGC...ACTCTGGCAACACAGAAACTGTGAATAATGTGTATGAGACGGATTACTCTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| CDS-3UTR CAA 90 bp | CCCACTGTATTTCATGACAGTACCATAGTATCTCCTTCCATTGGCCTTGCCTTGAACATTCCTGGCATTTaGTTCAACCTTGGCATGGAG | + |
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Preference number: 5 (lower is better) Translates to: PTVFHDSTIVSPSIGLALNIPGI*FNLGME Trigger: CTCCATGCCAAGGTTGAACAAAATGCCAGGAATGTT...CAAGGCAAGGCCAATGGAAGGAGATACTATGGTACTGTCATGAAATACAGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000167812.2 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000189061.7 |
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| CDS-3UTR CAA 90 bp | GTTTCTGTGTTGCCAGAGTCAGCTGACCTTCCCATTTTGGAGGGTTGTTTGAATGCAGAAAGTATGTCTTaGGACTTGGCCGATTTCATC | + |
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Preference number: 5 (lower is better) Translates to: VSVLPESADLPILEGCLNAESMS*DLADFI Trigger: GATGAAATCGGCCAAGTCCAAAGACATACTTTCTGC...ATTCAAACAACCCTCCAAAATGGGAAGGTCAGCTGACTCTGGCAACACAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| CDS CCA 90 bp | ATACATGTCTTTGGACTTGGCCGATTTCATCCCAGATTCCAGATGTaGGATCATCGATCTCAGGTATGTTTTCACGTCCATTCCAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: IHVFGLGRFHPRFQM*DHRSQVCFHVHSKS Trigger: ACTTTTGGAATGGACGTGAAAACATACCTGAGATCGATGATCCCACATCTGGAATCTGGGATGAAATCGGCCAAGTCCAAAGACATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172388.8 |
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| CDS CCA 90 bp | AAGTATGTCTTTGGACTTGGCCGATTTCATCCCAGATTCCAGATGTaGGATCATCGATCTCAGGTATGTTTTCACGTCCATTCCAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: KYVFGLGRFHPRFQM*DHRSQVCFHVHSKS Trigger: ACTTTTGGAATGGACGTGAAAACATACCTGAGATCGATGATCCCACATCTGGAATCTGGGATGAAATCGGCCAAGTCCAAAGACATACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| CDS-3UTR CAA 90 bp | ATTGGCCTTGCCTTGTTCTTCTTGTTCATGCTTCCTCAAGTCTCTACCTGGATAGGTGTTTTAATCTTCTaGGCTGTCGATTCTCGAGTA | + |
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Preference number: 5 (lower is better) Translates to: IGLALFFLFMLPQVSTWIGVLIF*AVDSRV Trigger: TACTCGAGAATCGACAGCCAAGAAGATTAAAACACC...TATCCAGGTAGAGACTTGAGGAAGCATGAACAAGAAGAACAAGGCAAGGCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189061.7 |
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| CDS CAA 72 bp | TCCTTTGGGCTAGCAGAAAAGAACATTCCTGGCATTTaGTTCAACCTTGGCATGGAGATGGCTGCCGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SFGLAEKNIPGI*FNLGMEMAAAL Trigger: GAGAGCGGCAGCCATCTCCATGCCAAGGTTGAACAAAATGCCAGGAATGTTCTTTTCTGCTAGCCCAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000167317.8 ENSMUST00000169409.3 ENSMUST00000172388.8 ENSMUST00000185714.2 ENSMUST00000189061.7 |
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