Pregenerated sensors for RGP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028468

Ensembl transcript IDs: ENSMUST00000030190.9, ENSMUST00000107886.9, ENSMUST00000117140.8

Found 229 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	AGCCTGGCCCAGCTCCGGCGGATGTTTTCCTTGTCCCTGCATAGGTaGCCTGTGCCAACCCTGACCCTGAACCTGTCCTGCCCCTTGCCC	+
Preference number: 1 (lower is better) Translates to: SLAQLRRMFSLSLHR*PVPTLTLNLSCPLP Trigger: GGGCAAGGGGCAGGACAGGTTCAGGGTCAGGGTTGGCACAGGCCACCTATGCAGGGACAAGGAAAACATCCGCCGGAGCTGGGCCAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	TGGGCTGGCCAAGCCAAGGGGATCCTCGGAGGCTGGAGGACCATCTaGTTGGTGGTGTCTCTGTTCCTACAGCACCCGGGAGTTAGCAGC	+
Preference number: 1 (lower is better) Translates to: WAGQAKGILGGWRTI*LVVSLFLQHPGVSS Trigger: GCTGCTAACTCCCGGGTGCTGTAGGAACAGAGACACCACCAAGCAGATGGTCCTCCAGCCTCCGAGGATCCCCTTGGCTTGGCCAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	AGTCCCGGAATAAGCTCACTTCCTCCCCTGCGCACCTGCCTGCGCTaGTGGAACACAGCCTGGCCCAGCTCCGGCGGATGTTTTCCTTGT	+
Preference number: 1 (lower is better) Translates to: SPGISSLPPLRTCLR*WNTAWPSSGGCFPC Trigger: ACAAGGAAAACATCCGCCGGAGCTGGGCCAGGCTGTGTTCCAGCAGCGCAGGCAGGTGCGCAGGGGAGGAAGTGAGCTTATTCCGGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	CTGAGAGCGCTGAGCAGCAGGAATGGCCCTAAGGATGCTCTGGGCTaGCCAAGCCAAGGGGATCCTCGGAGGCTGGAGGACCATCTGCTT	+
Preference number: 1 (lower is better) Translates to: LRALSSRNGPKDALG*PSQGDPRRLEDHLL Trigger: AAGCAGATGGTCCTCCAGCCTCCGAGGATCCCCTTGGCTTGGCCAGCCCAGAGCATCCTTAGGGCCATTCCTGCTGCTCAGCGCTCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	AGATGCCGGCCTGCTCTCCTGGAGACTTTGGCAGTTGCACCCTTGTaGAGCGCCTTGGTTTGGCTGGGGCACAGGATTAGCCATCCCCAG	+
Preference number: 1 (lower is better) Translates to: RCRPALLETLAVAPL*SALVWLGHRISHPQ Trigger: CTGGGGATGGCTAATCCTGTGCCCCAGCCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCAGGAGAGCAGGCCGGCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	CTAAGGATGCTCTGGGCTGGCCAAGCCAAGGGGATCCTCGGAGGCTaGAGGACCATCTGCTTGGTGGTGTCTCTGTTCCTACAGCACCCG	+
Preference number: 1 (lower is better) Translates to: LRMLWAGQAKGILGG*RTICLVVSLFLQHP Trigger: CGGGTGCTGTAGGAACAGAGACACCACCAAGCAGATGGTCCTCCAGCCTCCGAGGATCCCCTTGGCTTGGCCAGCCCAGAGCATCCTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	ATGGAATGCTTCCTCTCTGCAGGTCAAGGAGATCTGGGGACCACCTaGGGCCTTCAACCCTCCCCCTCCTGGCTGTGGAAGTGCCCAGTC	+
Preference number: 1 (lower is better) Translates to: MECFLSAGQGDLGTT*GLQPSPSWLWKCPV Trigger: GACTGGGCACTTCCACAGCCAGGAGGGGGAGGGTTGAAGGCCCCAGGTGGTCCCCAGATCTCCTTGACCTGCAGAGAGGAAGCATTCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	CTGGCCAAGCCAAGGGGATCCTCGGAGGCTGGAGGACCATCTGCTTaGTGGTGTCTCTGTTCCTACAGCACCCGGGAGTTAGCAGCAAGT	+
Preference number: 1 (lower is better) Translates to: LAKPRGSSEAGGPSA*WCLCSYSTRELAAS Trigger: ACTTGCTGCTAACTCCCGGGTGCTGTAGGAACAGAGACACCACCAAGCAGATGGTCCTCCAGCCTCCGAGGATCCCCTTGGCTTGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	TGGAGACTTTGGCAGTTGCACCCTTGTGCAGCGCCTTGGTTTGGCTaGGGCACAGGATTAGCCATCCCCAGGAAATGCCTCCCTCCGGTC	+
Preference number: 1 (lower is better) Translates to: WRLWQLHPCAAPWFG*GTGLAIPRKCLPPV Trigger: GACCGGAGGGAGGCATTTCCTGGGGATGGCTAATCCTGTGCCCCAGCCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	CTCCTGGAGACTTTGGCAGTTGCACCCTTGTGCAGCGCCTTGGTTTaGCTGGGGCACAGGATTAGCCATCCCCAGGAAATGCCTCCCTCC	+
Preference number: 1 (lower is better) Translates to: LLETLAVAPLCSALV*LGHRISHPQEMPPS Trigger: GGAGGGAGGCATTTCCTGGGGATGGCTAATCCTGTGCCCCAGCCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR TCA 90 bp	GCTACAGGAGGCAGGAACCTGTCAATTTTCCCTGGTGCAGAAAGCTaGCCCTCGGCTGCCCTGCAAAGGGGGAGGGCCCGACTTAGAATG	+
Preference number: 1 (lower is better) Translates to: ATGGRNLSIFPGAES*PSAALQRGRARLRM Trigger: CATTCTAAGTCGGGCCCTCCCCCTTTGCAGGGCAGCCGAGGGTCAGCTTTCTGCACCAGGGAAAATTGACAGGTTCCTGCCTCCTGTAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	GCCTTTGCCTCCTTCCAGAAGTCGCCACAGCCACAGGCCTTCACCTaGGCTTCAGGAGACTGGTTCTCACTTCGCAGTTTGGTGTGGCTC	+
Preference number: 1 (lower is better) Translates to: AFASFQKSPQPQAFT*ASGDWFSLRSLVWL Trigger: GAGCCACACCAAACTGCGAAGTGAGAACCAGTCTCCTGAAGCGCAGGTGAAGGCCTGTGGCTGTGGCGACTTCTGGAAGGAGGCAAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	TGCCCCTGCACACATCACTGCCCAGGCCACCAGCCAGGTCCCCACTaGCCTATAACCTCAGAAAGGAATTCTGCTCAGCCTTTGCCTCCT	+
Preference number: 1 (lower is better) Translates to: CPCTHHCPGHQPGPH*PITSERNSAQPLPP Trigger: AGGAGGCAAAGGCTGAGCAGAATTCCTTTCTGAGGTTATAGGGCAGTGGGGACCTGGCTGGTGGCCTGGGCAGTGATGTGTGCAGGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	GCCAAGCCAAGGGGATCCTCGGAGGCTGGAGGACCATCTGCTTGGTaGTGTCTCTGTTCCTACAGCACCCGGGAGTTAGCAGCAAGTGTT	+
Preference number: 1 (lower is better) Translates to: AKPRGSSEAGGPSAW*CLCSYSTRELAASV Trigger: AACACTTGCTGCTAACTCCCGGGTGCTGTAGGAACAGAGACACCACCAAGCAGATGGTCCTCCAGCCTCCGAGGATCCCCTTGGCTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	CTGCTCTCCTGGAGACTTTGGCAGTTGCACCCTTGTGCAGCGCCTTaGTTTGGCTGGGGCACAGGATTAGCCATCCCCAGGAAATGCCTC	+
Preference number: 1 (lower is better) Translates to: LLSWRLWQLHPCAAP*FGWGTGLAIPRKCL Trigger: GAGGCATTTCCTGGGGATGGCTAATCCTGTGCCCCAGCCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCAGGAGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	CCCTGGCATCTGAAGGAAACACAGTCTCCATTCCAGATGCCGGCCTaGTCTCCTGGAGACTTTGGCAGTTGCACCCTTGTGCAGCGCCTT	+
Preference number: 1 (lower is better) Translates to: PWHLKETQSPFQMPA*SPGDFGSCTLVQRL Trigger: AAGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCAGGAGAGCAGGCCGGCATCTGGAATGGAGACTGTGTTTCCTTCAGATGCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	ACAGTAGCTGCTGAAGGAAGAGGTGACAGGCGGGAGGTGTGTGTGTaGGTGCACACCAGGTGTGAGCTGTGTCTGTCCGTGGTATGTGAC	+
Preference number: 1 (lower is better) Translates to: TVAAEGRGDRREVCV*VHTRCELCLSVVCD Trigger: GTCACATACCACGGACAGACACAGCTCACACCTGGTGTGCACGCACACACACACCTCCCGCCTGTCACCTCTTCCTTCAGCAGCTACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	AGGGCCTTTCCTCTGCCCTTCCCCTCGAGTTTCCCAGCTCCAACCTaGCTCGCTGTGTCTGTTCAGCCACAAGCTATGAATTTAGGGGCT	+
Preference number: 1 (lower is better) Translates to: RAFPLPFPSSFPAPT*LAVSVQPQAMNLGA Trigger: AGCCCCTAAATTCATAGCTTGTGGCTGAACAGACACAGCGAGGCAGGTTGGAGCTGGGAAACTCGAGGGGAAGGGCAGAGGAAAGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	GACAGCCCTAGCTGGCCTAGCACACCTTATGACTTGCATGGATGGTaGCTTAGCAGCTTGGGCCTCACCTCCTCCTGCCTTTGCTTTCTG	+
Preference number: 1 (lower is better) Translates to: DSPSWPSTPYDLHGW*LSSLGLTSSCLCFL Trigger: CAGAAAGCAAAGGCAGGAGGAGGTGAGGCCCAAGCTGCTAAGGCACCATCCATGCAAGTCATAAGGTGTGCTAGGCCAGCTAGGGCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	TCTGAAGGAAACACAGTCTCCATTCCAGATGCCGGCCTGCTCTCCTaGAGACTTTGGCAGTTGCACCCTTGTGCAGCGCCTTGGTTTGGC	+
Preference number: 1 (lower is better) Translates to: SEGNTVSIPDAGLLS*RLWQLHPCAAPWFG Trigger: GCCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCAGGAGAGCAGGCCGGCATCTGGAATGGAGACTGTGTTTCCTTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR TCA 90 bp	CTGTTTCCATTGTACCTGTCTGCATCCTGTTGGTGTGGGCTGCTGTaGCACGTGAGTAGCCAGGAGTGGTCAGAGGGAATGCCTCTGGTG	+
Preference number: 1 (lower is better) Translates to: LFPLYLSASCWCGLL*HVSSQEWSEGMPLV Trigger: CACCAGAGGCATTCCCTCTGACCACTCCTGGCTACTCACGTGTCACAGCAGCCCACACCAACAGGATGCAGACAGGTACAATGGAAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	CTTAGCAGCTTGGGCCTCACCTCCTCCTGCCTTTGCTTTCTGGGATaGTCCATTCTAGGAAGACTCAGTAGGGCCTTTCCTCTGCCCTTC	+
Preference number: 1 (lower is better) Translates to: LSSLGLTSSCLCFLG*SILGRLSRAFPLPF Trigger: GAAGGGCAGAGGAAAGGCCCTACTGAGTCTTCCTAGAATGGAGCATCCCAGAAAGCAAAGGCAGGAGGAGGTGAGGCCCAAGCTGCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	ATGGACAGCCCTAGCTGGCCTAGCACACCTTATGACTTGCATGGATaGTGCCTTAGCAGCTTGGGCCTCACCTCCTCCTGCCTTTGCTTT	+
Preference number: 1 (lower is better) Translates to: MDSPSWPSTPYDLHG*CLSSLGLTSSCLCF Trigger: AAAGCAAAGGCAGGAGGAGGTGAGGCCCAAGCTGCTAAGGCACCATCCATGCAAGTCATAAGGTGTGCTAGGCCAGCTAGGGCTGTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	TGCATGGATCCTCTCCCACCCCAGACCAGGAGAGGCTGCTGCCAATaGTTCCAATTCTCATCTGCTAACACAGTGATTCTCATCCTCCCC	+
Preference number: 1 (lower is better) Translates to: CMDPLPPQTRRGCCQ*FQFSSANTVILILP Trigger: GGGGAGGATGAGAATCACTGTGTTAGCAGATGAGAATTGGAAGCATTGGCAGCAGCCTCTCCTGGTCTGGGGTGGGAGAGGATCCATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	CATGGATGGTGCCTTAGCAGCTTGGGCCTCACCTCCTCCTGCCTTTaGTTTCTGGGATGCTCCATTCTAGGAAGACTCAGTAGGGCCTTT	+
Preference number: 1 (lower is better) Translates to: HGWCLSSLGLTSSCL*FLGCSILGRLSRAF Trigger: AAAGGCCCTACTGAGTCTTCCTAGAATGGAGCATCCCAGAAAGCAAAGGCAGGAGGAGGTGAGGCCCAAGCTGCTAAGGCACCATCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	GACTTGCATGGATGGTGCCTTAGCAGCTTGGGCCTCACCTCCTCCTaGCTTTGCTTTCTGGGATGCTCCATTCTAGGAAGACTCAGTAGG	+
Preference number: 1 (lower is better) Translates to: DLHGWCLSSLGLTSS*LCFLGCSILGRLSR Trigger: CCTACTGAGTCTTCCTAGAATGGAGCATCCCAGAAAGCAAAGGCAGGAGGAGGTGAGGCCCAAGCTGCTAAGGCACCATCCATGCAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	GGGGTAGTATGCATGGATCCTCTCCCACCCCAGACCAGGAGAGGCTaGTGCCAATGCTTCCAATTCTCATCTGCTAACACAGTGATTCTC	+
Preference number: 1 (lower is better) Translates to: GVVCMDPLPPQTRRG*CQCFQFSSANTVIL Trigger: GAGAATCACTGTGTTAGCAGATGAGAATTGGAAGCATTGGCAGCAGCCTCTCCTGGTCTGGGGTGGGAGAGGATCCATGCATACTACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	AGCAGGGATACCTTGGAGCATACATGTGAAAGACAGAAGTTGGTCTaGAGAGTCCACAGCAGAAGCCTTCAGCTGGGCACGGCTACTTGC	+
Preference number: 1 (lower is better) Translates to: SRDTLEHTCERQKLV*RVHSRSLQLGTATC Trigger: GCAAGTAGCCGTGCCCAGCTGAAGGCTTCTGCTGTGGACTCTCCAGACCAACTTCTGTCTTTCACATGTATGCTCCAAGGTATCCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	CAGTGTTGGGATGGTTATATGGAAACAGCCCTATCAGCCTTCCTTTaGGGACCTGAGAGTGGGGTACTGGATGGCAGGCTGGGTTCCATA	+
Preference number: 1 (lower is better) Translates to: QCWDGYMETALSAFL*GPESGVLDGRLGSI Trigger: TATGGAACCCAGCCTGCCATCCAGTACCCCACTCTCAGGTCCCCAAAGGAAGGCTGATAGGGCTGTTTCCATATAACCATCCCAACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107886.9 ENSMUST00000117140.8
3UTR CCA 90 bp	CACACTAGGGGAACCCTCCTGTTTCTCAGTGTTGGGATGGTTATATaGAAACAGCCCTATCAGCCTTCCTTTGGGGACCTGAGAGTGGGG	+
Preference number: 1 (lower is better) Translates to: HTRGTLLFLSVGMVI*KQPYQPSFGDLRVG Trigger: CCCCACTCTCAGGTCCCCAAAGGAAGGCTGATAGGGCTGTTTCCATATAACCATCCCAACACTGAGAAACAGGAGGGTTCCCCTAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107886.9 ENSMUST00000117140.8
3UTR TCA 90 bp	TTTCTACTCTCAATAGACAGACAAGGAGCAGGGTGGCAGGTGAAGTaGCCTGTGCAAGGTCAGCCAGCCAGTGAGCAGTCACCATGTGAA	+
Preference number: 1 (lower is better) Translates to: FLLSIDRQGAGWQVK*PVQGQPASEQSPCE Trigger: TTCACATGGTGACTGCTCACTGGCTGGCTGACCTTGCACAGGTCACTTCACCTGCCACCCTGCTCCTTGTCTGTCTATTGAGAGTAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	GGAAGTGGGAAAAGCAGCTTGATCAACATCACCCTTCAACCTAGATaGTCCCAGGACAGCACAGGTCTTAGGAGGCAGCAGGGATACCTT	+
Preference number: 1 (lower is better) Translates to: GSGKSSLINITLQPR*SQDSTGLRRQQGYL Trigger: AAGGTATCCCTGCTGCCTCCTAAGACCTGTGCTGTCCTGGGAGCATCTAGGTTGAAGGGTGATGTTGATCAAGCTGCTTTTCCCACTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	GTGTTAGAACAGCCATTCCTTCAACCTGTGAATGGGAAGGCTATATaGAGGGGTAGTATGCATGGATCCTCTCCCACCCCAGACCAGGAG	+
Preference number: 1 (lower is better) Translates to: VLEQPFLQPVNGKAI*RGSMHGSSPTPDQE Trigger: CTCCTGGTCTGGGGTGGGAGAGGATCCATGCATACTACCCCTCCATATAGCCTTCCCATTCACAGGTTGAAGGAATGGCTGTTCTAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	GTAGTATGCATGGATCCTCTCCCACCCCAGACCAGGAGAGGCTGCTaGCAATGCTTCCAATTCTCATCTGCTAACACAGTGATTCTCATC	+
Preference number: 1 (lower is better) Translates to: VVCMDPLPPQTRRGC*QCFQFSSANTVILI Trigger: GATGAGAATCACTGTGTTAGCAGATGAGAATTGGAAGCATTGGCAGCAGCCTCTCCTGGTCTGGGGTGGGAGAGGATCCATGCATACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	GCTCCCTGCCACTACGAGGGTAAATACTTCACTCTGGGTGAATCTTaGCTCCGCAAGGACTGTTTCCATTGTACCTGTCTGCATCCTGTT	+
Preference number: 1 (lower is better) Translates to: APCHYEGKYFTLGES*LRKDCFHCTCLHPV Trigger: AACAGGATGCAGACAGGTACAATGGAAACAGTCCTTGCGGAGCCAAGATTCACCCAGAGTGAAGTATTTACCCTCGTAGTGGCAGGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	CCAGAGAGGACATCATTTCTGTCTTTGTGCTTTAGCCTCAAGCAGTaGCGATTTTCTGAGGGCCATGGGCCAAAGGTGGCGCTAAGAACA	+
Preference number: 1 (lower is better) Translates to: PERTSFLSLCFSLKQ*RFSEGHGPKVALRT Trigger: TGTTCTTAGCGCCACCTTTGGCCCATGGCCCTCAGAAAATCGCCACTGCTTGAGGCTAAAGCACAAAGACAGAAATGATGTCCTCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 90 bp	AACAACTACTCCAGTACAGAAAGCCTCTTTAGAGCCAGGAGCTACTaGCACGATCCAAATACTTTAACCCTTGATGCTCCCTGGAGCCCC	+
Preference number: 1 (lower is better) Translates to: NNYSSTESLFRARSY*HDPNTLTLDAPWSP Trigger: GGGGCTCCAGGGAGCATCAAGGGTTAAAGTATTTGGATCGTGGCAGTAGCTCCTGGCTCTAAAGAGGCTTTCTGTACTGGAGTAGTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 90 bp	AGAAGCATGGCCAGGAACAGGACAAGCTTGCATCTGCTGTCCACTTaGGGTGAGATGCGAAGTTTATCTTTGGGGTGCTTTTGGATGAAC	+
Preference number: 1 (lower is better) Translates to: RSMARNRTSLHLLST*GEMRSLSLGCFWMN Trigger: GTTCATCCAAAAGCACCCCAAAGATAAACTTCGCATCTCACCCCAAGTGGACAGCAGATGCAAGCTTGTCCTGTTCCTGGCCATGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR TCA 90 bp	ATCCACTATCTTTATGGTCACAGGCCAACGTGGTTCCAGTTTACCTaGGAATTCCAAACAACTACTCCAGTACAGAAAGCCTCTTTAGAG	+
Preference number: 1 (lower is better) Translates to: IHYLYGHRPTWFQFT*EFQTTTPVQKASLE Trigger: CTCTAAAGAGGCTTTCTGTACTGGAGTAGTTGTTTGGAATTCTCAGGTAAACTGGAACCACGTTGGCCTGTGACCATAAAGATAGTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 90 bp	GCTGGCCAAGCCAAGGGGATCCTCGGAGGCTGGAGGACCATCTGCTaGGTGGTGTCTCTGTTCCTACAGCACCCGGGAGTTAGCAGCAAG	+
Preference number: 2 (lower is better) Translates to: AGQAKGILGGWRTIC*VVSLFLQHPGVSSK Trigger: CTTGCTGCTAACTCCCGGGTGCTGTAGGAACAGAGACACCACCAAGCAGATGGTCCTCCAGCCTCCGAGGATCCCCTTGGCTTGGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 90 bp	TCCAGATGCCGGCCTGCTCTCCTGGAGACTTTGGCAGTTGCACCCTaGTGCAGCGCCTTGGTTTGGCTGGGGCACAGGATTAGCCATCCC	+
Preference number: 2 (lower is better) Translates to: SRCRPALLETLAVAP*CSALVWLGHRISHP Trigger: GGGATGGCTAATCCTGTGCCCCAGCCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCAGGAGAGCAGGCCGGCATCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR GCA 90 bp	GACTCAGTAGGGCCTTTCCTCTGCCCTTCCCCTCGAGTTTCCCAGCTCCAACCTGTTTCTCACTGCCTGTaGTACGGGGGCCCAGGTGGG	+
Preference number: 2 (lower is better) Translates to: DSVGPFLCPSPRVSQLQPVSHCL*YGGPGG Trigger: CCCACCTGGGCCCCCGTAGCACAGGCAGTGAGAAAC...AGGTTGGAGCTGGGAAACTCGAGGGGAAGGGCAGAGGAAAGGCCCTACTGAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CCA 90 bp	AAGGAATTCTGCTCAGCCTTTGCCTCCTTCCAGAAGTCGCCACAGCCACAGGCCGATCTGGGGACCACCTaGGGCCTTCAACCCTCCCCC	+
Preference number: 2 (lower is better) Translates to: KEFCSAFASFQKSPQPQADLGTT*GLQPSP Trigger: GGGGGAGGGTTGAAGGCCCCAGGTGGTCCCCAGATC...GGCCTGTGGCTGTGGCGACTTCTGGAAGGAGGCAAAGGCTGAGCAGAATTCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR TCA 90 bp	GACTCAGTAGGGCCTTTCCTCTGCCCTTCCCCTCGAGTTTCCCAGCTCCAACCTGGCTTGCCCATCTGCTaGTTGCTCACTGCTGCTGCC	+
Preference number: 2 (lower is better) Translates to: DSVGPFLCPSPRVSQLQPGLPIC*LLTAAA Trigger: GGCAGCAGCAGTGAGCAATCAGCAGATGGGCAAGCC...AGGTTGGAGCTGGGAAACTCGAGGGGAAGGGCAGAGGAAAGGCCCTACTGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CCA 90 bp	GACTCAGTAGGGCCTTTCCTCTGCCCTTCCCCTCGAGTTTCCCAGCTCCAACCTGGGAGGATGGCTGAGTaGGAAGCGCAGGCCCTAAAG	+
Preference number: 2 (lower is better) Translates to: DSVGPFLCPSPRVSQLQPGRMAE*EAQALK Trigger: CTTTAGGGCCTGCGCTTCCCACTCAGCCATCCTCCC...AGGTTGGAGCTGGGAAACTCGAGGGGAAGGGCAGAGGAAAGGCCCTACTGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 90 bp	CCTGCTCTCCTGGAGACTTTGGCAGTTGCACCCTTGTGCAGCGCCTaGGTTTGGCTGGGGCACAGGATTAGCCATCCCCAGGAAATGCCT	+
Preference number: 2 (lower is better) Translates to: PALLETLAVAPLCSA*VWLGHRISHPQEMP Trigger: AGGCATTTCCTGGGGATGGCTAATCCTGTGCCCCAGCCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCAGGAGAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 90 bp	GTCTCCATTCCAGATGCCGGCCTGCTCTCCTGGAGACTTTGGCAGTaGCACCCTTGTGCAGCGCCTTGGTTTGGCTGGGGCACAGGATTA	+
Preference number: 2 (lower is better) Translates to: VSIPDAGLLSWRLWQ*HPCAAPWFGWGTGL Trigger: TAATCCTGTGCCCCAGCCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCAGGAGAGCAGGCCGGCATCTGGAATGGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 90 bp	AAACACAGTCTCCATTCCAGATGCCGGCCTGCTCTCCTGGAGACTTaGGCAGTTGCACCCTTGTGCAGCGCCTTGGTTTGGCTGGGGCAC	+
Preference number: 2 (lower is better) Translates to: KHSLHSRCRPALLET*AVAPLCSALVWLGH Trigger: GTGCCCCAGCCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCAGGAGAGCAGGCCGGCATCTGGAATGGAGACTGTGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR GCA 90 bp	AAGGAATTCTGCTCAGCCTTTGCCTCCTTCCAGAAGTCGCCACAGCCACAGGCCAAGCCCGTTTCTCACTaGCTGTGCTACGGGGGCCCA	+
Preference number: 2 (lower is better) Translates to: KEFCSAFASFQKSPQPQAKPVSH*LCYGGP Trigger: TGGGCCCCCGTAGCACAGGCAGTGAGAAACGGGCTT...GGCCTGTGGCTGTGGCGACTTCTGGAAGGAGGCAAAGGCTGAGCAGAATTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CCA 90 bp	AAGGAATTCTGCTCAGCCTTTGCCTCCTTCCAGAAGTCGCCACAGCCACAGGCCCAGGTCAAGGAGATCTaGGGACCACCTGGGGCCTTC	+
Preference number: 2 (lower is better) Translates to: KEFCSAFASFQKSPQPQAQVKEI*GPPGAF Trigger: GAAGGCCCCAGGTGGTCCCCAGATCTCCTTGACCTG...GGCCTGTGGCTGTGGCGACTTCTGGAAGGAGGCAAAGGCTGAGCAGAATTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR TCA 90 bp	AAGGAATTCTGCTCAGCCTTTGCCTCCTTCCAGAAGTCGCCACAGCCACAGGCCTTCCCAGCCATGGTATaGGACGGGAGCCCAAGGAGA	+
Preference number: 2 (lower is better) Translates to: KEFCSAFASFQKSPQPQAFPAMV*DGSPRR Trigger: TCTCCTTGGGCTCCCGTCTCATACCATGGCTGGGAA...GGCCTGTGGCTGTGGCGACTTCTGGAAGGAGGCAAAGGCTGAGCAGAATTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR TCA 90 bp	CTGGAGAGTCCACAGCAGAAGCCTTCAGCTGGGCACGGCTACTTGCTGTTGTCCTGGTGGAGGGAGGGTTaGTGGAATGCTTCCTCTCTG	+
Preference number: 2 (lower is better) Translates to: LESPQQKPSAGHGYLLLSWWREG*WNASSL Trigger: CAGAGAGGAAGCATTCCATCAACCCTCCCTCCACCA...GGACAACAGCAAGTAGCCGTGCCCAGCTGAAGGCTTCTGCTGTGGACTCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR GCA 90 bp	ACTACGAGGGTAAATACTTCACTCTGGGTGAATCTTGGCTCCGCAAGGACTGTTGACCCTCGGCTGCCCTaGAAAGGGGGAGGGCCCGAC	+
Preference number: 2 (lower is better) Translates to: TTRVNTSLWVNLGSARTVDPRLP*KGGGPD Trigger: GTCGGGCCCTCCCCCTTTGCAGGGCAGCCGAGGGTC...AACAGTCCTTGCGGAGCCAAGATTCACCCAGAGTGAAGTATTTACCCTCGTAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR GCA 90 bp	CTCTTGTTTTCATGCCCTCACCTCAGGAAACAGAGTTCCAGCCTGTCCAGCTCTAAGCTGACCCTCGGCTaGCCTGCAAAGGGGGAGGGC	+
Preference number: 2 (lower is better) Translates to: LLFSCPHLRKQSSSLSSSKLTLG*PAKGEG Trigger: GCCCTCCCCCTTTGCAGGGCAGCCGAGGGTCAGCTT...AGAGCTGGACAGGCTGGAACTCTGTTTCCTGAGGTGAGGGCATGAAAACAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR GCA 90 bp	CAGAGGAGTCTGAGCCGAAGCCAGGAAGGGTCTGAGAGCGCTGAGCAGCAGGAAGTCAATTTTCCCTGGTaGAGAAAGCTGACCCTCGGC	+
Preference number: 2 (lower is better) Translates to: QRSLSRSQEGSESAEQQEVNFPW*RKLTLG Trigger: GCCGAGGGTCAGCTTTCTGCACCAGGGAAAATTGAC...TTCCTGCTGCTCAGCGCTCTCAGACCCTTCCTGGCTTCGGCTCAGACTCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR GCA 90 bp	GGACCATCTGCTTGGTGGTGTCTCTGTTCCTACAGCACCCGGGAGTTAGCAGCAGGAATGCCTCTGGTGTaGCTAAGGGATGGCCAGGGA	+
Preference number: 2 (lower is better) Translates to: GPSAWWCLCSYSTRELAAGMPLV*LRDGQG Trigger: TCCCTGGCCATCCCTTAGGCACACCAGAGGCATTCC...TGCTGCTAACTCCCGGGTGCTGTAGGAACAGAGACACCACCAAGCAGATGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CCA 90 bp	GACTCAGTAGGGCCTTTCCTCTGCCCTTCCCCTCGAGTTTCCCAGCTCCAACCTGACAGGGCAGAAGCATaGCCAGGAACAGGACAAGCT	+
Preference number: 2 (lower is better) Translates to: DSVGPFLCPSPRVSQLQPDRAEA*PGTGQA Trigger: AGCTTGTCCTGTTCCTGGCCATGCTTCTGCCCTGTC...AGGTTGGAGCTGGGAAACTCGAGGGGAAGGGCAGAGGAAAGGCCCTACTGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR GCA 90 bp	CAGAGGAGTCTGAGCCGAAGCCAGGAAGGGTCTGAGAGCGCTGAGCAGCAGGAACTGATTGCTCACTGCTaGTGCCACTTTCAGGGAAAC	+
Preference number: 2 (lower is better) Translates to: QRSLSRSQEGSESAEQQELIAHC*CHFQGN Trigger: GTTTCCCTGAAAGTGGCAGCAGCAGTGAGCAATCAG...TTCCTGCTGCTCAGCGCTCTCAGACCCTTCCTGGCTTCGGCTCAGACTCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR GCA 90 bp	GACTCAGTAGGGCCTTTCCTCTGCCCTTCCCCTCGAGTTTCCCAGCTCCAACCTACCCTTCAACCTAGATaGTCCCAGGACAGCACAGGT	+
Preference number: 2 (lower is better) Translates to: DSVGPFLCPSPRVSQLQPTLQPR*SQDSTG Trigger: ACCTGTGCTGTCCTGGGAGCATCTAGGTTGAAGGGT...AGGTTGGAGCTGGGAAACTCGAGGGGAAGGGCAGAGGAAAGGCCCTACTGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 90 bp	GTCCCCCATCTCCCTGAGCCATCATCTCCAAACGCTCTGTCCCATTaGGGTAAAGCAAGGGTTGGGGTGACTCAGTCCCGGAATAAGCTC	+
Preference number: 2 (lower is better) Translates to: VPHLPEPSSPNALSH*GKARVGVTQSRNKL Trigger: GAGCTTATTCCGGGACTGAGTCACCCCAACCCTTGCTTTACCCAAATGGGACAGAGCGTTTGGAGATGATGGCTCAGGGAGATGGGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR TCA 90 bp	GACTCAGTAGGGCCTTTCCTCTGCCCTTCCCCTCGAGTTTCCCAGCTCCAACCTGCCTTGAAGTCCACATaGGGGGATGAAGGAAAAGTC	+
Preference number: 2 (lower is better) Translates to: DSVGPFLCPSPRVSQLQPALKST*GDEGKV Trigger: GACTTTTCCTTCATCCCCTCATGTGGACTTCAAGGC...AGGTTGGAGCTGGGAAACTCGAGGGGAAGGGCAGAGGAAAGGCCCTACTGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR GCA 90 bp	GGACCATCTGCTTGGTGGTGTCTCTGTTCCTACAGCACCCGGGAGTTAGCAGCATGCCCATCTGCTGATTaGTCACTGCTGCTGCCACTT	+
Preference number: 2 (lower is better) Translates to: GPSAWWCLCSYSTRELAACPSAD*SLLLPL Trigger: AAGTGGCAGCAGCAGTGAGCAATCAGCAGATGGGCA...TGCTGCTAACTCCCGGGTGCTGTAGGAACAGAGACACCACCAAGCAGATGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR GCA 90 bp	GAAGACTCAGTAGGGCCTTTCCTCTGCCCTTCCCCTCGAGTTTCCCAGCTCCAACTGCTGAGTGTGAAGTaGTACAGGAGGCAGGAACCT	+
Preference number: 2 (lower is better) Translates to: EDSVGPFLCPSPRVSQLQLLSVK*YRRQEP Trigger: AGGTTCCTGCCTCCTGTAGCACTTCACACTCAGCAG...TTGGAGCTGGGAAACTCGAGGGGAAGGGCAGAGGAAAGGCCCTACTGAGTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CCA 90 bp	CTGGAGAGTCCACAGCAGAAGCCTTCAGCTGGGCACGGCTACTTGCTGTTGTCCACTCTGGGTGAATCTTaGCTCCGCAAGGACTGTTTC	+
Preference number: 2 (lower is better) Translates to: LESPQQKPSAGHGYLLLSTLGES*LRKDCF Trigger: GAAACAGTCCTTGCGGAGCCAAGATTCACCCAGAGT...GGACAACAGCAAGTAGCCGTGCCCAGCTGAAGGCTTCTGCTGTGGACTCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CCA 90 bp	GACTCAGTAGGGCCTTTCCTCTGCCCTTCCCCTCGAGTTTCCCAGCTCCAACCTCCTTCAACCTGTGAATaGGAAGGCTATATGGAGGGG	+
Preference number: 2 (lower is better) Translates to: DSVGPFLCPSPRVSQLQPPSTCE*EGYMEG Trigger: CCCCTCCATATAGCCTTCCCATTCACAGGTTGAAGG...AGGTTGGAGCTGGGAAACTCGAGGGGAAGGGCAGAGGAAAGGCCCTACTGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CCA 90 bp	GACTCAGTAGGGCCTTTCCTCTGCCCTTCCCCTCGAGTTTCCCAGCTCCAACCTCCGCTTCCCAAGGTATaGAAGTGGGAAAAGCAGCTT	+
Preference number: 2 (lower is better) Translates to: DSVGPFLCPSPRVSQLQPPLPKV*KWEKQL Trigger: AAGCTGCTTTTCCCACTTCCATACCTTGGGAAGCGG...AGGTTGGAGCTGGGAAACTCGAGGGGAAGGGCAGAGGAAAGGCCCTACTGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 90 bp	TGGCCTAGCACACCTTATGACTTGCATGGATGGTGCCTTAGCAGCTaGGGCCTCACCTCCTCCTGCCTTTGCTTTCTGGGATGCTCCATT	+
Preference number: 2 (lower is better) Translates to: WPSTPYDLHGWCLSS*GLTSSCLCFLGCSI Trigger: AATGGAGCATCCCAGAAAGCAAAGGCAGGAGGAGGTGAGGCCCAAGCTGCTAAGGCACCATCCATGCAAGTCATAAGGTGTGCTAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR TCA 90 bp	ACTACGAGGGTAAATACTTCACTCTGGGTGAATCTTGGCTCCGCAAGGACTGTTCCTGGTGCAGAAAGCTaGCCCTCGGCTGCCCTGCAA	+
Preference number: 2 (lower is better) Translates to: TTRVNTSLWVNLGSARTVPGAES*PSAALQ Trigger: TTGCAGGGCAGCCGAGGGTCAGCTTTCTGCACCAGG...AACAGTCCTTGCGGAGCCAAGATTCACCCAGAGTGAAGTATTTACCCTCGTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR TCA 90 bp	TTGTCTCTAGCTACTGCAGAAAACGCTCTATGCTCAGCCTTCAGGTTGATCCCCGAGCAGGGTGGCAGGTaGAGTGACCTGTGCAAGGTC	+
Preference number: 2 (lower is better) Translates to: LSLATAENALCSAFRLIPEQGGR*SDLCKV Trigger: GACCTTGCACAGGTCACTTCACCTGCCACCCTGCTC...GGGGATCAACCTGAAGGCTGAGCATAGAGCGTTTTCTGCAGTAGCTAGAGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR GCA 90 bp	AAGGAATTCTGCTCAGCCTTTGCCTCCTTCCAGAAGTCGCCACAGCCACAGGCCATTGCTCACTGCTGCTaGCACTTTCAGGGAAACCAC	+
Preference number: 2 (lower is better) Translates to: KEFCSAFASFQKSPQPQAIAHCC*HFQGNH Trigger: GTGGTTTCCCTGAAAGTGGCAGCAGCAGTGAGCAAT...GGCCTGTGGCTGTGGCGACTTCTGGAAGGAGGCAAAGGCTGAGCAGAATTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CCA 90 bp	TTGTCTCTAGCTACTGCAGAAAACGCTCTATGCTCAGCCTTCAGGTTGATCCCCCCTTGTGCAGCGCCTTaGTTTGGCTGGGGCACAGGA	+
Preference number: 2 (lower is better) Translates to: LSLATAENALCSAFRLIPPCAAP*FGWGTG Trigger: TCCTGTGCCCCAGCCAAACCAAGGCGCTGCACAAGG...GGGGATCAACCTGAAGGCTGAGCATAGAGCGTTTTCTGCAGTAGCTAGAGACAA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CCA 90 bp	GAAGACTCAGTAGGGCCTTTCCTCTGCCCTTCCCCTCGAGTTTCCCAGCTCCAACTTCCAGGACTCCTTTaGGTTTGTTCAGGACCTTCC	+
Preference number: 2 (lower is better) Translates to: EDSVGPFLCPSPRVSQLQLPGLL*VCSGPS Trigger: GGAAGGTCCTGAACAAACCCAAAGGAGTCCTGGAAG...TTGGAGCTGGGAAACTCGAGGGGAAGGGCAGAGGAAAGGCCCTACTGAGTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 90 bp	GATGCTCCCAGGACAGCACAGGTCTTAGGAGGCAGCAGGGATACCTaGGAGCATACATGTGAAAGACAGAAGTTGGTCTGGAGAGTCCAC	+
Preference number: 2 (lower is better) Translates to: DAPRTAQVLGGSRDT*EHTCERQKLVWRVH Trigger: GTGGACTCTCCAGACCAACTTCTGTCTTTCACATGTATGCTCCAAGGTATCCCTGCTGCCTCCTAAGACCTGTGCTGTCCTGGGAGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 90 bp	TGCCTCGCTGTGTCTGTTCAGCCACAAGCTATGAATTTAGGGGCTTaGCTGGGCAGAAAGCAGCCCCTTCCAGGACTCCTTTGGGTTTGT	+
Preference number: 2 (lower is better) Translates to: CLAVSVQPQAMNLGA*LGRKQPLPGLLWVC Trigger: ACAAACCCAAAGGAGTCCTGGAAGGGGCTGCTTTCTGCCCAGCAAAGCCCCTAAATTCATAGCTTGTGGCTGAACAGACACAGCGAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR TCA 90 bp	TTGTCTCTAGCTACTGCAGAAAACGCTCTATGCTCAGCCTTCAGGTTGATCCCCGGCTTTGCCCCATCATaGGGAAAGAGGGGGCATCTC	+
Preference number: 2 (lower is better) Translates to: LSLATAENALCSAFRLIPGFAPS*GKRGHL Trigger: GAGATGCCCCCTCTTTCCTCATGATGGGGCAAAGCC...GGGGATCAACCTGAAGGCTGAGCATAGAGCGTTTTCTGCAGTAGCTAGAGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR GCA 90 bp	AAGGAATTCTGCTCAGCCTTTGCCTCCTTCCAGAAGTCGCCACAGCCACAGGCCCAGAGTCAGCAGAAATaGAGACCTTGGAAGGCTTTG	+
Preference number: 2 (lower is better) Translates to: KEFCSAFASFQKSPQPQAQSQQK*RPWKAL Trigger: CAAAGCCTTCCAAGGTCTGCATTTCTGCTGACTCTG...GGCCTGTGGCTGTGGCGACTTCTGGAAGGAGGCAAAGGCTGAGCAGAATTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR TCA 90 bp	AGGGTAAATACTTCACTCTGGGTGAATCTTGGCTCCGCAAGGACTGTTTCCATTGGCTGCTGTGACACGTaGGTAGCCAGGAGTGGTCAG	+
Preference number: 2 (lower is better) Translates to: RVNTSLWVNLGSARTVSIGCCDT*VARSGQ Trigger: CTGACCACTCCTGGCTACTCACGTGTCACAGCAGCC...AATGGAAACAGTCCTTGCGGAGCCAAGATTCACCCAGAGTGAAGTATTTACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR TCA 90 bp	AGGGTAAATACTTCACTCTGGGTGAATCTTGGCTCCGCAAGGACTGTTTCCATTTGGTGTGGGCTGCTGTaGCACGTGAGTAGCCAGGAG	+
Preference number: 2 (lower is better) Translates to: RVNTSLWVNLGSARTVSIWCGLL*HVSSQE Trigger: CTCCTGGCTACTCACGTGTCACAGCAGCCCACACCA...AATGGAAACAGTCCTTGCGGAGCCAAGATTCACCCAGAGTGAAGTATTTACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR TCA 90 bp	TTGTCTCTAGCTACTGCAGAAAACGCTCTATGCTCAGCCTTCAGGTTGATCCCCCTCACCTCACAATGCTaGGGGCTGCCATCTTTCCGA	+
Preference number: 2 (lower is better) Translates to: LSLATAENALCSAFRLIPLTSQC*GLPSFR Trigger: TCGGAAAGATGGCAGCCCTCAGCATTGTGAGGTGAG...GGGGATCAACCTGAAGGCTGAGCATAGAGCGTTTTCTGCAGTAGCTAGAGACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR TCA 90 bp	GTTCAGCCACAAGCTATGAATTTAGGGGCTTTGCTGGGCAGAAAGCAGCCCCTTATGAGCTGTCGCCCATaGGCTGGCATTTCTACTCTC	+
Preference number: 2 (lower is better) Translates to: VQPQAMNLGALLGRKQPLMSCRP*AGISTL Trigger: GAGAGTAGAAATGCCAGCTCATGGGCGACAGCTCAT...AAGGGGCTGCTTTCTGCCCAGCAAAGCCCCTAAATTCATAGCTTGTGGCTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR GCA 90 bp	GTTCAGCCACAAGCTATGAATTTAGGGGCTTTGCTGGGCAGAAAGCAGCCCCTTGGACAAGCTTGCATCTaGTGTCCACTTGGGGTGAGA	+
Preference number: 2 (lower is better) Translates to: VQPQAMNLGALLGRKQPLGQACI*CPLGVR Trigger: TCTCACCCCAAGTGGACAGCAGATGCAAGCTTGTCC...AAGGGGCTGCTTTCTGCCCAGCAAAGCCCCTAAATTCATAGCTTGTGGCTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CCA 90 bp	CATTCCCAGCCATGGTATGAGACGGGAGCCCAAGGAGAGAGAAACTCAGGAGTCGTAAATACTTCACTCTaGGTGAATCTTGGCTCCGCA	+
Preference number: 2 (lower is better) Translates to: HSQPWYETGAQGERNSGVVNTSL*VNLGSA Trigger: TGCGGAGCCAAGATTCACCCAGAGTGAAGTATTTAC...GACTCCTGAGTTTCTCTCTCCTTGGGCTCCCGTCTCATACCATGGCTGGGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CCA 90 bp	TTGTCTCTAGCTACTGCAGAAAACGCTCTATGCTCAGCCTTCAGGTTGATCCCCCCTGTCAATTTTCCCTaGTGCAGAAAGCTGACCCTC	+
Preference number: 2 (lower is better) Translates to: LSLATAENALCSAFRLIPPVNFP*CRKLTL Trigger: GAGGGTCAGCTTTCTGCACCAGGGAAAATTGACAGG...GGGGATCAACCTGAAGGCTGAGCATAGAGCGTTTTCTGCAGTAGCTAGAGACAA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CCA 90 bp	ACTACGAGGGTAAATACTTCACTCTGGGTGAATCTTGGCTCCGCAAGGACTGTTGTAAGAGAGCTTAGGTaGGGCGATGGGACACCAAGA	+
Preference number: 2 (lower is better) Translates to: TTRVNTSLWVNLGSARTVVRELR*GDGTPR Trigger: TCTTGGTGTCCCATCGCCCCACCTAAGCTCTCTTAC...AACAGTCCTTGCGGAGCCAAGATTCACCCAGAGTGAAGTATTTACCCTCGTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CCA 90 bp	GTTCAGCCACAAGCTATGAATTTAGGGGCTTTGCTGGGCAGAAAGCAGCCCCTTCATCTGCTGTCCACTTaGGGTGAGATGCGAAGTTTA	+
Preference number: 2 (lower is better) Translates to: VQPQAMNLGALLGRKQPLHLLST*GEMRSL Trigger: TAAACTTCGCATCTCACCCCAAGTGGACAGCAGATG...AAGGGGCTGCTTTCTGCCCAGCAAAGCCCCTAAATTCATAGCTTGTGGCTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR TCA 90 bp	TTGTCTCTAGCTACTGCAGAAAACGCTCTATGCTCAGCCTTCAGGTTGATCCCCCATTCCTTCAACCTGTaGATGGGAAGGCTATATGGA	+
Preference number: 2 (lower is better) Translates to: LSLATAENALCSAFRLIPHSFNL*MGRLYG Trigger: TCCATATAGCCTTCCCATTCACAGGTTGAAGGAATG...GGGGATCAACCTGAAGGCTGAGCATAGAGCGTTTTCTGCAGTAGCTAGAGACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR TCA 90 bp	TTGTCTCTAGCTACTGCAGAAAACGCTCTATGCTCAGCCTTCAGGTTGATCCCCCTTGGAGCATACATGTaGAAGACAGAAGTTGGTCTG	+
Preference number: 2 (lower is better) Translates to: LSLATAENALCSAFRLIPLGAYM*KTEVGL Trigger: CAGACCAACTTCTGTCTTTCACATGTATGCTCCAAG...GGGGATCAACCTGAAGGCTGAGCATAGAGCGTTTTCTGCAGTAGCTAGAGACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR GCA 90 bp	AGGGTAAATACTTCACTCTGGGTGAATCTTGGCTCCGCAAGGACTGTTTCCATTCTTGGAAAAACTAGTTaGCATGGTGGGCATGTGAGC	+
Preference number: 2 (lower is better) Translates to: RVNTSLWVNLGSARTVSILGKTS*HGGHVS Trigger: GCTCACATGCCCACCATGGCAACTAGTTTTTCCAAG...AATGGAAACAGTCCTTGCGGAGCCAAGATTCACCCAGAGTGAAGTATTTACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	ATAAGCTCACTTCCTCCCCTGCGCACCTGCCTGCGCTaGTGGAACACAGCCTGGCCCAGCTCCGGCGGATGT	+
Preference number: 3 (lower is better) Translates to: ISSLPPLRTCLR*WNTAWPSSGGC Trigger: ACATCCGCCGGAGCTGGGCCAGGCTGTGTTCCAGCAGCGCAGGCAGGTGCGCAGGGGAGGAAGTGAGCTTAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	CTGAGCAGCAGGAATGGCCCTAAGGATGCTCTGGGCTaGCCAAGCCAAGGGGATCCTCGGAGGCTGGAGGAC	+
Preference number: 3 (lower is better) Translates to: LSSRNGPKDALG*PSQGDPRRLED Trigger: GTCCTCCAGCCTCCGAGGATCCCCTTGGCTTGGCCAGCCCAGAGCATCCTTAGGGCCATTCCTGCTGCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CAA 90 bp	CCCTCCCCCTCCTGGCTGTGGAAGTGCCCAGTCCAGCGCCCCTTCCACGGCCACATCCGCTCTCACAGCTaGTTAAAAGCTGGACCTCTT	+
Preference number: 3 (lower is better) Translates to: PSPSWLWKCPVQRPFHGHIRSHS*LKAGPL Trigger: AAGAGGTCCAGCTTTTAACAAGCTGTGAGAGCGGAT...GTGGCCGTGGAAGGGGCGCTGGACTGGGCACTTCCACAGCCAGGAGGGGGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	CAGATGCCGGCCTGCTCTCCTGGAGACTTTGGCAGTTaGACCCTTGTGCAGCGCCTTGGTTTGGCTGGGGCA	+
Preference number: 3 (lower is better) Translates to: QMPACSPGDFGS*TLVQRLGLAGA Trigger: TGCCCCAGCCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCAGGAGAGCAGGCCGGCATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	TTCCTCTCTGCAGGTCAAGGAGATCTGGGGACCACCTaGGGCCTTCAACCCTCCCCCTCCTGGCTGTGGAAG	+
Preference number: 3 (lower is better) Translates to: FLSAGQGDLGTT*GLQPSPSWLWK Trigger: CTTCCACAGCCAGGAGGGGGAGGGTTGAAGGCCCCAGGTGGTCCCCAGATCTCCTTGACCTGCAGAGAGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	CAAGCCAAGGGGATCCTCGGAGGCTGGAGGACCATCTaGTTGGTGGTGTCTCTGTTCCTACAGCACCCGGGA	+
Preference number: 3 (lower is better) Translates to: QAKGILGGWRTI*LVVSLFLQHPG Trigger: TCCCGGGTGCTGTAGGAACAGAGACACCACCAAGCAGATGGTCCTCCAGCCTCCGAGGATCCCCTTGGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	CTCTGGGCTGGCCAAGCCAAGGGGATCCTCGGAGGCTaGAGGACCATCTGCTTGGTGGTGTCTCTGTTCCTA	+
Preference number: 3 (lower is better) Translates to: LWAGQAKGILGG*RTICLVVSLFL Trigger: TAGGAACAGAGACACCACCAAGCAGATGGTCCTCCAGCCTCCGAGGATCCCCTTGGCTTGGCCAGCCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	CAGCTCCGGCGGATGTTTTCCTTGTCCCTGCATAGGTaGCCTGTGCCAACCCTGACCCTGAACCTGTCCTGC	+
Preference number: 3 (lower is better) Translates to: QLRRMFSLSLHR*PVPTLTLNLSC Trigger: GCAGGACAGGTTCAGGGTCAGGGTTGGCACAGGCCACCTATGCAGGGACAAGGAAAACATCCGCCGGAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CAA 90 bp	CAGAGGAGTCTGAGCCGAAGCCAGGAAGGGTCTGAGAGCGCTGAGCAGCAGGAACCTGACTCCCAACCTTaGGTTCTCCAGGGCTCAGCA	+
Preference number: 3 (lower is better) Translates to: QRSLSRSQEGSESAEQQEPDSQP*VLQGSA Trigger: TGCTGAGCCCTGGAGAACCAAAGGTTGGGAGTCAGG...TTCCTGCTGCTCAGCGCTCTCAGACCCTTCCTGGCTTCGGCTCAGACTCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	ACACCCCTGCTGGTGGTGGAGGGAGGGTTGATGGAATaGTTCCTCTCTGCAGGTCAAGGAGATCTGGGGACC	+
Preference number: 3 (lower is better) Translates to: TPLLVVEGGLME*FLSAGQGDLGT Trigger: GGTCCCCAGATCTCCTTGACCTGCAGAGAGGAAGCATTCCATCAACCCTCCCTCCACCACCAGCAGGGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	CCTGCTCTCCTGGAGACTTTGGCAGTTGCACCCTTGTaGAGCGCCTTGGTTTGGCTGGGGCACAGGATTAGC	+
Preference number: 3 (lower is better) Translates to: PALLETLAVAPL*SALVWLGHRIS Trigger: GCTAATCCTGTGCCCCAGCCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCAGGAGAGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	TGGCAGTTGCACCCTTGTGCAGCGCCTTGGTTTGGCTaGGGCACAGGATTAGCCATCCCCAGGAAATGCCTC	+
Preference number: 3 (lower is better) Translates to: WQLHPCAAPWFG*GTGLAIPRKCL Trigger: GAGGCATTTCCTGGGGATGGCTAATCCTGTGCCCCAGCCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	TGGAGACTTTGGCAGTTGCACCCTTGTGCAGCGCCTTaGTTTGGCTGGGGCACAGGATTAGCCATCCCCAGG	+
Preference number: 3 (lower is better) Translates to: WRLWQLHPCAAP*FGWGTGLAIPR Trigger: CCTGGGGATGGCTAATCCTGTGCCCCAGCCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	TGTGCGTGCACACCAGGTGTGAGCTGTGTCTGTCCGTaGTATGTGACGGGGAGCAAAGCGAGGGATGAAGGG	+
Preference number: 3 (lower is better) Translates to: CACTPGVSCVCP*YVTGSKARDEG Trigger: CCCTTCATCCCTCGCTTTGCTCCCCGTCACATACCACGGACAGACACAGCTCACACCTGGTGTGCACGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CAA 90 bp	CTTCAACCCTCCCCCTCCTGGCTGTGGAAGTGCCCAGTCCAGCGCCCCTTCCACCAAGGACTGTTTCCATaGTACCTGTCTGCATCCTGT	+
Preference number: 3 (lower is better) Translates to: LQPSPSWLWKCPVQRPFHQGLFP*YLSASC Trigger: ACAGGATGCAGACAGGTACAATGGAAACAGTCCTTG...GTGGAAGGGGCGCTGGACTGGGCACTTCCACAGCCAGGAGGGGGAGGGTTGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	AAGGAAGAGGTGACAGGCGGGAGGTGTGTGTGTGCGTaGACACCAGGTGTGAGCTGTGTCTGTCCGTGGTAT	+
Preference number: 3 (lower is better) Translates to: KEEVTGGRCVCA*TPGVSCVCPWY Trigger: ATACCACGGACAGACACAGCTCACACCTGGTGTGCACGCACACACACACCTCCCGCCTGTCACCTCTTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	GATGGGACACCAAGAGGGCGTGGGAGGATGGCTGAGTaGGAAGCGCAGGCCCTAAAGGAGGCTTTTTACTGT	+
Preference number: 3 (lower is better) Translates to: DGTPRGRGRMAE*EAQALKEAFYC Trigger: ACAGTAAAAAGCCTCCTTTAGGGCCTGCGCTTCCCACTCAGCCATCCTCCCACGCCCTCTTGGTGTCCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	AACACAGTCTCCATTCCAGATGCCGGCCTGCTCTCCTaGAGACTTTGGCAGTTGCACCCTTGTGCAGCGCCT	+
Preference number: 3 (lower is better) Translates to: NTVSIPDAGLLS*RLWQLHPCAAP Trigger: AGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCAGGAGAGCAGGCCGGCATCTGGAATGGAGACTGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	CCTAGCTGGCCTAGCACACCTTATGACTTGCATGGATaGTGCCTTAGCAGCTTGGGCCTCACCTCCTCCTGC	+
Preference number: 3 (lower is better) Translates to: PSWPSTPYDLHG*CLSSLGLTSSC Trigger: GCAGGAGGAGGTGAGGCCCAAGCTGCTAAGGCACCATCCATGCAAGTCATAAGGTGTGCTAGGCCAGCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR TCA 72 bp	TGCCTAAGGGATGGCCAGGGAGTCCCTAGATTTCTGTaGGGCACGAGTAAACAGAAGGGCCTCCCGAGACTG	+
Preference number: 3 (lower is better) Translates to: CLRDGQGVPRFL*GTSKQKGLPRL Trigger: CAGTCTCGGGAGGCCCTTCTGTTTACTCGTGCCTCACAGAAATCTAGGGACTCCCTGGCCATCCCTTAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	TGTGAGGCACGAGTAAACAGAAGGGCCTCCCGAGACTaGAGATGTGAAGGCACCAAGAGAGGGGAAGTCGAG	+
Preference number: 3 (lower is better) Translates to: CEARVNRRASRD*RCEGTKRGEVE Trigger: CTCGACTTCCCCTCTCTTGGTGCCTTCACATCTGCAGTCTCGGGAGGCCCTTCTGTTTACTCGTGCCTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	AGTAGCCAGGAGTGGTCAGAGGGAATGCCTCTGGTGTaGCTAAGGGATGGCCAGGGAGTCCCTAGATTTCTG	+
Preference number: 3 (lower is better) Translates to: SSQEWSEGMPLV*LRDGQGVPRFL Trigger: CAGAAATCTAGGGACTCCCTGGCCATCCCTTAGGCACACCAGAGGCATTCCCTCTGACCACTCCTGGCTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	TCCTTCCAGAAGTCGCCACAGCCACAGGCCTTCACCTaGGCTTCAGGAGACTGGTTCTCACTTCGCAGTTTG	+
Preference number: 3 (lower is better) Translates to: SFQKSPQPQAFT*ASGDWFSLRSL Trigger: CAAACTGCGAAGTGAGAACCAGTCTCCTGAAGCGCAGGTGAAGGCCTGTGGCTGTGGCGACTTCTGGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	CCTCTGCCCTTCCCCTCGAGTTTCCCAGCTCCAACCTaGCTCGCTGTGTCTGTTCAGCCACAAGCTATGAAT	+
Preference number: 3 (lower is better) Translates to: PLPFPSSFPAPT*LAVSVQPQAMN Trigger: ATTCATAGCTTGTGGCTGAACAGACACAGCGAGGCAGGTTGGAGCTGGGAAACTCGAGGGGAAGGGCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	AGCTGGCCTAGCACACCTTATGACTTGCATGGATGGTaGCTTAGCAGCTTGGGCCTCACCTCCTCCTGCCTT	+
Preference number: 3 (lower is better) Translates to: SWPSTPYDLHGW*LSSLGLTSSCL Trigger: AAGGCAGGAGGAGGTGAGGCCCAAGCTGCTAAGGCACCATCCATGCAAGTCATAAGGTGTGCTAGGCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	ACTTTGGCAGTTGCACCCTTGTGCAGCGCCTTGGTTTaGCTGGGGCACAGGATTAGCCATCCCCAGGAAATG	+
Preference number: 3 (lower is better) Translates to: TLAVAPLCSALV*LGHRISHPQEM Trigger: CATTTCCTGGGGATGGCTAATCCTGTGCCCCAGCCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	CCAGCACTCCTCCAGAGTCAGCAGAAATGCAGACCTTaGAAGGCTTTGCCCCATCATGAGGAAAGAGGGGGC	+
Preference number: 3 (lower is better) Translates to: PALLQSQQKCRP*KALPHHEERGG Trigger: GCCCCCTCTTTCCTCATGATGGGGCAAAGCCTTCCAAGGTCTGCATTTCTGCTGACTCTGGAGGAGTGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CAA 90 bp	GAAGACTCAGTAGGGCCTTTCCTCTGCCCTTCCCCTCGAGTTTCCCAGCTCCAAACTGGAGTCCAGGGGTaGAGCTCTCAGTTTCTTGGA	+
Preference number: 3 (lower is better) Translates to: EDSVGPFLCPSPRVSQLQTGVQG*SSQFLG Trigger: TCCAAGAAACTGAGAGCTCAACCCCTGGACTCCAGT...TTGGAGCTGGGAAACTCGAGGGGAAGGGCAGAGGAAAGGCCCTACTGAGTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR TCA 72 bp	GGAAGCGCAGGCCCTAAAGGAGGCTTTTTACTGTCCTaGCTCCCAACCTTTGGTTCTCCAGGGCTCAGCATC	+
Preference number: 3 (lower is better) Translates to: GSAGPKGGFLLS*LPTFGSPGLSI Trigger: GATGCTGAGCCCTGGAGAACCAAAGGTTGGGAGTCAGGACAGTAAAAAGCCTCCTTTAGGGCCTGCGCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR TCA 72 bp	TTGTACCTGTCTGCATCCTGTTGGTGTGGGCTGCTGTaGCACGTGAGTAGCCAGGAGTGGTCAGAGGGAATG	+
Preference number: 3 (lower is better) Translates to: LYLSASCWCGLL*HVSSQEWSEGM Trigger: CATTCCCTCTGACCACTCCTGGCTACTCACGTGTCACAGCAGCCCACACCAACAGGATGCAGACAGGTACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	CTTGGCTCCGCAAGGACTGTTTCCATTGTACCTGTCTaGATCCTGTTGGTGTGGGCTGCTGTGACACGTGAG	+
Preference number: 3 (lower is better) Translates to: LGSARTVSIVPV*ILLVWAAVTRE Trigger: CTCACGTGTCACAGCAGCCCACACCAACAGGATGCAGACAGGTACAATGGAAACAGTCCTTGCGGAGCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	GGATGGTGCCTTAGCAGCTTGGGCCTCACCTCCTCCTaGCTTTGCTTTCTGGGATGCTCCATTCTAGGAAGA	+
Preference number: 3 (lower is better) Translates to: GWCLSSLGLTSS*LCFLGCSILGR Trigger: TCTTCCTAGAATGGAGCATCCCAGAAAGCAAAGGCAGGAGGAGGTGAGGCCCAAGCTGCTAAGGCACCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	AGTTGGTCTGGAGAGTCCACAGCAGAAGCCTTCAGCTaGGCACGGCTACTTGCTGTTGTCCAGAGAGGACAT	+
Preference number: 3 (lower is better) Translates to: SWSGESTAEAFS*ARLLAVVQRGH Trigger: ATGTCCTCTCTGGACAACAGCAAGTAGCCGTGCCCAGCTGAAGGCTTCTGCTGTGGACTCTCCAGACCAACT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR TCA 72 bp	ACGAGTAAACAGAAGGGCCTCCCGAGACTGCAGATGTaGAGGCACCAAGAGAGGGGAAGTCGAGGTAGATCT	+
Preference number: 3 (lower is better) Translates to: TSKQKGLPRLQM*RHQERGSRGRS Trigger: AGATCTACCTCGACTTCCCCTCTCTTGGTGCCTTCACATCTGCAGTCTCGGGAGGCCCTTCTGTTTACTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	ATGGATCCTCTCCCACCCCAGACCAGGAGAGGCTGCTaGCAATGCTTCCAATTCTCATCTGCTAACACAGTG	+
Preference number: 3 (lower is better) Translates to: MDPLPPQTRRGC*QCFQFSSANTV Trigger: CACTGTGTTAGCAGATGAGAATTGGAAGCATTGGCAGCAGCCTCTCCTGGTCTGGGGTGGGAGAGGATCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	TGCATGGATCCTCTCCCACCCCAGACCAGGAGAGGCTaGTGCCAATGCTTCCAATTCTCATCTGCTAACACA	+
Preference number: 3 (lower is better) Translates to: CMDPLPPQTRRG*CQCFQFSSANT Trigger: TGTGTTAGCAGATGAGAATTGGAAGCATTGGCAGCAGCCTCTCCTGGTCTGGGGTGGGAGAGGATCCATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	ATAAAAAGTCCTTGTGTGGGAGTAAGAGAGCTTAGGTaGGGCGATGGGACACCAAGAGGGCGTGGGAGGATG	+
Preference number: 3 (lower is better) Translates to: IKSPCVGVRELR*GDGTPRGRGRM Trigger: CATCCTCCCACGCCCTCTTGGTGTCCCATCGCCCCACCTAAGCTCTCTTACTCCCACACAAGGACTTTTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	CCTGCGCTTCAGGAGACTGGTTCTCACTTCGCAGTTTaGTGTGGCTCAGTAATGTCCGCCCAGTCTCATTTC	+
Preference number: 3 (lower is better) Translates to: PALQETGSHFAV*CGSVMSAQSHF Trigger: GAAATGAGACTGGGCGGACATTACTGAGCCACACCAAACTGCGAAGTGAGAACCAGTCTCCTGAAGCGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	TGCCACGATCCAAATACTTTAACCCTTGATGCTCCCTaGAGCCCCTTCCTTTCCATAGGCCATGGACAGCCC	+
Preference number: 3 (lower is better) Translates to: CHDPNTLTLDAP*SPFLSIGHGQP Trigger: GGGCTGTCCATGGCCTATGGAAAGGAAGGGGCTCCAGGGAGCATCAAGGGTTAAAGTATTTGGATCGTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	GATGGTTATATGGAAACAGCCCTATCAGCCTTCCTTTaGGGACCTGAGAGTGGGGTACTGGATGGCAGGCTG	+
Preference number: 3 (lower is better) Translates to: DGYMETALSAFL*GPESGVLDGRL Trigger: CAGCCTGCCATCCAGTACCCCACTCTCAGGTCCCCAAAGGAAGGCTGATAGGGCTGTTTCCATATAACCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107886.9 ENSMUST00000117140.8
3UTR TCA 72 bp	CCCGCTTCCCAAGGTATGGAAGTGGGAAAAGCAGCTTaGTCAACATCACCCTTCAACCTAGATGCTCCCAGG	+
Preference number: 3 (lower is better) Translates to: PASQGMEVGKAA*STSPFNLDAPR Trigger: CCTGGGAGCATCTAGGTTGAAGGGTGATGTTGATCAAGCTGCTTTTCCCACTTCCATACCTTGGGAAGCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR TCA 72 bp	CAGGAGCTACTGCCACGATCCAAATACTTTAACCCTTaGTGCTCCCTGGAGCCCCTTCCTTTCCATAGGCCA	+
Preference number: 3 (lower is better) Translates to: QELLPRSKYFNP*CSLEPLPFHRP Trigger: TGGCCTATGGAAAGGAAGGGGCTCCAGGGAGCATCAAGGGTTAAAGTATTTGGATCGTGGCAGTAGCTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	GTCCACAGCAGAAGCCTTCAGCTGGGCACGGCTACTTaGTGTTGTCCAGAGAGGACATCATTTCTGTCTTTG	+
Preference number: 3 (lower is better) Translates to: VHSRSLQLGTAT*CCPERTSFLSL Trigger: CAAAGACAGAAATGATGTCCTCTCTGGACAACAGCAAGTAGCCGTGCCCAGCTGAAGGCTTCTGCTGTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	CAGCCATTCCTTCAACCTGTGAATGGGAAGGCTATATaGAGGGGTAGTATGCATGGATCCTCTCCCACCCCA	+
Preference number: 3 (lower is better) Translates to: QPFLQPVNGKAI*RGSMHGSSPTP Trigger: TGGGGTGGGAGAGGATCCATGCATACTACCCCTCCATATAGCCTTCCCATTCACAGGTTGAAGGAATGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	GCTTCAGGAGACTGGTTCTCACTTCGCAGTTTGGTGTaGCTCAGTAATGTCCGCCCAGTCTCATTTCCAGCA	+
Preference number: 3 (lower is better) Translates to: ASGDWFSLRSLV*LSNVRPVSFPA Trigger: TGCTGGAAATGAGACTGGGCGGACATTACTGAGCCACACCAAACTGCGAAGTGAGAACCAGTCTCCTGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR-3UTR CAA 90 bp	GTTCAGCCACAAGCTATGAATTTAGGGGCTTTGCTGGGCAGAAAGCAGCCCCTTAACGCTCTGTCCCATTaGGGTAAAGCAAGGGTTGGG	+
Preference number: 3 (lower is better) Translates to: VQPQAMNLGALLGRKQPLNALSH*GKARVG Trigger: CCCAACCCTTGCTTTACCCAAATGGGACAGAGCGTT...AAGGGGCTGCTTTCTGCCCAGCAAAGCCCCTAAATTCATAGCTTGTGGCTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR TCA 72 bp	GCTGCCAATGCTTCCAATTCTCATCTGCTAACACAGTaGTTCTCATCCTCCCCTAGCTCCCTGCCACTACGA	+
Preference number: 3 (lower is better) Translates to: AANASNSHLLTQ*FSSSPSSLPLR Trigger: TCGTAGTGGCAGGGAGCTAGGGGAGGATGAGAATCACTGTGTTAGCAGATGAGAATTGGAAGCATTGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	GCAGAAGCATGGCCAGGAACAGGACAAGCTTGCATCTaGTGTCCACTTGGGGTGAGATGCGAAGTTTATCTT	+
Preference number: 3 (lower is better) Translates to: AEAWPGTGQACI*CPLGVRCEVYL Trigger: AAGATAAACTTCGCATCTCACCCCAAGTGGACAGCAGATGCAAGCTTGTCCTGTTCCTGGCCATGCTTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	AAAAGCAGCTTGATCAACATCACCCTTCAACCTAGATaGTCCCAGGACAGCACAGGTCTTAGGAGGCAGCAG	+
Preference number: 3 (lower is better) Translates to: KSSLINITLQPR*SQDSTGLRRQQ Trigger: CTGCTGCCTCCTAAGACCTGTGCTGTCCTGGGAGCATCTAGGTTGAAGGGTGATGTTGATCAAGCTGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	GGGATACCTTGGAGCATACATGTGAAAGACAGAAGTTaGTCTGGAGAGTCCACAGCAGAAGCCTTCAGCTGG	+
Preference number: 3 (lower is better) Translates to: GIPWSIHVKDRS*SGESTAEAFSW Trigger: CCAGCTGAAGGCTTCTGCTGTGGACTCTCCAGACCAACTTCTGTCTTTCACATGTATGCTCCAAGGTATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	GGGACCTCTAGCCTCACTTGCATTGTCTCTAGCTACTaGAGAAAACGCTCTATGCTCAGCCTTCAGGTTGAT	+
Preference number: 3 (lower is better) Translates to: GTSSLTCIVSSY*RKRSMLSLQVD Trigger: ATCAACCTGAAGGCTGAGCATAGAGCGTTTTCTGCAGTAGCTAGAGACAATGCAAGTGAGGCTAGAGGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR TCA 72 bp	GGGTCACAAAGGCGCCTTGAAGTCCACATGAGGGGATaGAGGAAAAGTCAGAATCCAAGTAAGAGAAAGCAG	+
Preference number: 3 (lower is better) Translates to: GSQRRLEVHMRG*RKSQNPSKRKQ Trigger: CTGCTTTCTCTTACTTGGATTCTGACTTTTCCTTCATCCCCTCATGTGGACTTCAAGGCGCCTTTGTGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR TCA 72 bp	AAGAAGTCCAGTTTGACCAGGGTCACAAAGGCGCCTTaGAGTCCACATGAGGGGATGAAGGAAAAGTCAGAA	+
Preference number: 3 (lower is better) Translates to: KKSSLTRVTKAP*SPHEGMKEKSE Trigger: TTCTGACTTTTCCTTCATCCCCTCATGTGGACTTCAAGGCGCCTTTGTGACCCTGGTCAAACTGGACTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR GCA 72 bp	TCCAGTACAGAAAGCCTCTTTAGAGCCAGGAGCTACTaGCACGATCCAAATACTTTAACCCTTGATGCTCCC	+
Preference number: 3 (lower is better) Translates to: SSTESLFRARSY*HDPNTLTLDAP Trigger: GGGAGCATCAAGGGTTAAAGTATTTGGATCGTGGCAGTAGCTCCTGGCTCTAAAGAGGCTTTCTGTACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	CACTACGAGGGTAAATACTTCACTCTGGGTGAATCTTaGCTCCGCAAGGACTGTTTCCATTGTACCTGTCTG	+
Preference number: 3 (lower is better) Translates to: HYEGKYFTLGES*LRKDCFHCTCL Trigger: CAGACAGGTACAATGGAAACAGTCCTTGCGGAGCCAAGATTCACCCAGAGTGAAGTATTTACCCTCGTAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	ACACTAGGGGAACCCTCCTGTTTCTCAGTGTTGGGATaGTTATATGGAAACAGCCCTATCAGCCTTCCTTTG	+
Preference number: 3 (lower is better) Translates to: TLGEPSCFSVLG*LYGNSPISLPL Trigger: CAAAGGAAGGCTGATAGGGCTGTTTCCATATAACCATCCCAACACTGAGAAACAGGAGGGTTCCCCTAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107886.9 ENSMUST00000117140.8
3UTR TCA 72 bp	TTTGACCAGGGTCACAAAGGCGCCTTGAAGTCCACATaGGGGGATGAAGGAAAAGTCAGAATCCAAGTAAGA	+
Preference number: 3 (lower is better) Translates to: FDQGHKGALKST*GDEGKVRIQVR Trigger: TCTTACTTGGATTCTGACTTTTCCTTCATCCCCTCATGTGGACTTCAAGGCGCCTTTGTGACCCTGGTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CCA 72 bp	CAGGGAACCTTCTTCTTACACCATCCACTATCTTTATaGTCACAGGCCAACGTGGTTCCAGTTTACCTGAGA	+
Preference number: 3 (lower is better) Translates to: QGTFFLHHPLSL*SQANVVPVYLR Trigger: TCTCAGGTAAACTGGAACCACGTTGGCCTGTGACCATAAAGATAGTGGATGGTGTAAGAAGAAGGTTCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR TCA 72 bp	CTTTATGGTCACAGGCCAACGTGGTTCCAGTTTACCTaGGAATTCCAAACAACTACTCCAGTACAGAAAGCC	+
Preference number: 3 (lower is better) Translates to: LYGHRPTWFQFT*EFQTTTPVQKA Trigger: GGCTTTCTGTACTGGAGTAGTTGTTTGGAATTCTCAGGTAAACTGGAACCACGTTGGCCTGTGACCATAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 72 bp	CCAGATGCCGGCCTGCTCTCCTGGAGACTTTGGCAGTaGCACCCTTGTGCAGCGCCTTGGTTTGGCTGGGGC	+
Preference number: 4 (lower is better) Translates to: PDAGLLSWRLWQ*HPCAAPWFGWG Trigger: GCCCCAGCCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCAGGAGAGCAGGCCGGCATCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	CCCTCCCCCTCCTGGCTGTGGAAGTGCCCAGTCCAGCGCCCCTTCCACGGCCACTGGGGAGAGAGAAGCTaGTTCTGGTTGTATGTAGGC	+
Preference number: 4 (lower is better) Translates to: PSPSWLWKCPVQRPFHGHWGERS*FWLYVG Trigger: GCCTACATACAACCAGAACCAGCTTCTCTCTCCCCA...GTGGCCGTGGAAGGGGCGCTGGACTGGGCACTTCCACAGCCAGGAGGGGGAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR TCA 90 bp	GCTGGAGGACCATCTGCTTGGTGGTGTCTCTGTTCCTACAGCACCCGGGAGTTAGGCTGGACGTCCGGCTaGCTAGAGTCAGGGGGTGGC	+
Preference number: 4 (lower is better) Translates to: AGGPSAWWCLCSYSTRELGWTSG*LESGGG Trigger: GCCACCCCCTGACTCTAGTCAGCCGGACGTCCAGCC...TAACTCCCGGGTGCTGTAGGAACAGAGACACCACCAAGCAGATGGTCCTCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 72 bp	GAACACAGCCTGGCCCAGCTCCGGCGGATGTTTTCCTaGTCCCTGCATAGGTGGCCTGTGCCAACCCTGACC	+
Preference number: 4 (lower is better) Translates to: EHSLAQLRRMFS*SLHRWPVPTLT Trigger: GGTCAGGGTTGGCACAGGCCACCTATGCAGGGACAAGGAAAACATCCGCCGGAGCTGGGCCAGGCTGTGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR TCA 90 bp	CAGAGGAGTCTGAGCCGAAGCCAGGAAGGGTCTGAGAGCGCTGAGCAGCAGGAAAGGATGTGGCAGCCATaGGACGCTCCCCAGCTAGCT	+
Preference number: 4 (lower is better) Translates to: QRSLSRSQEGSESAEQQERMWQP*DAPQLA Trigger: AGCTAGCTGGGGAGCGTCTCATGGCTGCCACATCCT...TTCCTGCTGCTCAGCGCTCTCAGACCCTTCCTGGCTTCGGCTCAGACTCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 72 bp	GCCAAGGGGATCCTCGGAGGCTGGAGGACCATCTGCTaGGTGGTGTCTCTGTTCCTACAGCACCCGGGAGTT	+
Preference number: 4 (lower is better) Translates to: AKGILGGWRTIC*VVSLFLQHPGV Trigger: AACTCCCGGGTGCTGTAGGAACAGAGACACCACCAAGCAGATGGTCCTCCAGCCTCCGAGGATCCCCTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	AAGGAATTCTGCTCAGCCTTTGCCTCCTTCCAGAAGTCGCCACAGCCACAGGCCAAGGCGGGCCCTCCGTaGGCAGCACTTCACTGTAGG	+
Preference number: 4 (lower is better) Translates to: KEFCSAFASFQKSPQPQAKAGPP*AALHCR Trigger: CCTACAGTGAAGTGCTGCCCACGGAGGGCCCGCCTT...GGCCTGTGGCTGTGGCGACTTCTGGAAGGAGGCAAAGGCTGAGCAGAATTCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 72 bp	CTCCATTCCAGATGCCGGCCTGCTCTCCTGGAGACTTaGGCAGTTGCACCCTTGTGCAGCGCCTTGGTTTGG	+
Preference number: 4 (lower is better) Translates to: LHSRCRPALLET*AVAPLCSALVW Trigger: CCAAACCAAGGCGCTGCACAAGGGTGCAACTGCCAAAGTCTCCAGGAGAGCAGGCCGGCATCTGGAATGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR TCA 90 bp	CTTCAACCCTCCCCCTCCTGGCTGTGGAAGTGCCCAGTCCAGCGCCCCTTCCACGTAGACATATTTGACTaGCTGACCCCGAAAGGAAGG	+
Preference number: 4 (lower is better) Translates to: LQPSPSWLWKCPVQRPFHVDIFD*LTPKGR Trigger: CCTTCCTTTCGGGGTCAGTCAGTCAAATATGTCTAC...GTGGAAGGGGCGCTGGACTGGGCACTTCCACAGCCAGGAGGGGGAGGGTTGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR TCA 90 bp	CTTCAACCCTCCCCCTCCTGGCTGTGGAAGTGCCCAGTCCAGCGCCCCTTCCACGTCTGTACACAGATTTaGAGATACCGAACGTCCCGA	+
Preference number: 4 (lower is better) Translates to: LQPSPSWLWKCPVQRPFHVCTQI*RYRTSR Trigger: TCGGGACGTTCGGTATCTTCAAATCTGTGTACAGAC...GTGGAAGGGGCGCTGGACTGGGCACTTCCACAGCCAGGAGGGGGAGGGTTGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR GCA 90 bp	GCTGATTGCTCACTGCTGCTGCCACTTTCAGGGAAACCACTAGCAGCTGCCAACCAGAGCCTCACTGGATaGAGAAGTGGCGGTCGGGGG	+
Preference number: 4 (lower is better) Translates to: ADCSLLLPLSGKPLAAANQSLTG*RSGGRG Trigger: CCCCCGACCGCCACTTCTGCATCCAGTGAGGCTCTG...GTTGGCAGCTGCTAGTGGTTTCCCTGAAAGTGGCAGCAGCAGTGAGCAATCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	GCTGGAGGACCATCTGCTTGGTGGTGTCTCTGTTCCTACAGCACCCGGGAGTTACACTGGATGCAGAAGTaGCGGTCGGGGGAAGGGGAT	+
Preference number: 4 (lower is better) Translates to: AGGPSAWWCLCSYSTRELHWMQK*RSGEGD Trigger: ATCCCCTTCCCCCGACCGCCACTTCTGCATCCAGTG...TAACTCCCGGGTGCTGTAGGAACAGAGACACCACCAAGCAGATGGTCCTCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	GGACCATCTGCTTGGTGGTGTCTCTGTTCCTACAGCACCCGGGAGTTAGCAGCAAACTGGCAGTGGATCTaGGCACTGGCCCAGGCCAGA	+
Preference number: 4 (lower is better) Translates to: GPSAWWCLCSYSTRELAANWQWI*ALAQAR Trigger: TCTGGCCTGGGCCAGTGCCCAGATCCACTGCCAGTT...TGCTGCTAACTCCCGGGTGCTGTAGGAACAGAGACACCACCAAGCAGATGGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	AAGGAATTCTGCTCAGCCTTTGCCTCCTTCCAGAAGTCGCCACAGCCACAGGCCGCATGGAACTGGCAGTaGATCTGGGCACTGGCCCAG	+
Preference number: 4 (lower is better) Translates to: KEFCSAFASFQKSPQPQAAWNWQ*IWALAQ Trigger: CTGGGCCAGTGCCCAGATCCACTGCCAGTTCCATGC...GGCCTGTGGCTGTGGCGACTTCTGGAAGGAGGCAAAGGCTGAGCAGAATTCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR TCA 90 bp	GACTCAGTAGGGCCTTTCCTCTGCCCTTCCCCTCGAGTTTCCCAGCTCCAACCTACATATTTGACTGACTaGCCCCGAAAGGAAGGCGGG	+
Preference number: 4 (lower is better) Translates to: DSVGPFLCPSPRVSQLQPTYLTD*PRKEGG Trigger: CCCGCCTTCCTTTCGGGGTCAGTCAGTCAAATATGT...AGGTTGGAGCTGGGAAACTCGAGGGGAAGGGCAGAGGAAAGGCCCTACTGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR TCA 90 bp	GGACCATCTGCTTGGTGGTGTCTCTGTTCCTACAGCACCCGGGAGTTAGCAGCATCCCTCGGCCATCGCTaGTATTGTACAGATGGAGGC	+
Preference number: 4 (lower is better) Translates to: GPSAWWCLCSYSTRELAASLGHR*YCTDGG Trigger: GCCTCCATCTGTACAATATCAGCGATGGCCGAGGGA...TGCTGCTAACTCCCGGGTGCTGTAGGAACAGAGACACCACCAAGCAGATGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	GCTGATTGCTCACTGCTGCTGCCACTTTCAGGGAAACCACTAGCAGCTGCCAACGGCAGAAAGACAGTCTaGCTGTCAGGCTGGACGTCC	+
Preference number: 4 (lower is better) Translates to: ADCSLLLPLSGKPLAAANGRKTV*LSGWTS Trigger: GGACGTCCAGCCTGACAGCCAGACTGTCTTTCTGCC...GTTGGCAGCTGCTAGTGGTTTCCCTGAAAGTGGCAGCAGCAGTGAGCAATCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 72 bp	CTCCCTGAGCCATCATCTCCAAACGCTCTGTCCCATTaGGGTAAAGCAAGGGTTGGGGTGACTCAGTCCCGG	+
Preference number: 4 (lower is better) Translates to: LPEPSSPNALSH*GKARVGVTQSR Trigger: CCGGGACTGAGTCACCCCAACCCTTGCTTTACCCAAATGGGACAGAGCGTTTGGAGATGATGGCTCAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	AAGGAATTCTGCTCAGCCTTTGCCTCCTTCCAGAAGTCGCCACAGCCACAGGCCGTAGAAAGGATACACTaGCCCCTCTCACCTCGGTGT	+
Preference number: 4 (lower is better) Translates to: KEFCSAFASFQKSPQPQAVERIH*PLSPRC Trigger: ACACCGAGGTGAGAGGGGCCAGTGTATCCTTTCTAC...GGCCTGTGGCTGTGGCGACTTCTGGAAGGAGGCAAAGGCTGAGCAGAATTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	AAGGAATTCTGCTCAGCCTTTGCCTCCTTCCAGAAGTCGCCACAGCCACAGGCCGGTGAGTTCACGCGCTaGCAGCCAATGGTCAATTTG	+
Preference number: 4 (lower is better) Translates to: KEFCSAFASFQKSPQPQAGEFTR*QPMVNL Trigger: CAAATTGACCATTGGCTGCCAGCGCGTGAACTCACC...GGCCTGTGGCTGTGGCGACTTCTGGAAGGAGGCAAAGGCTGAGCAGAATTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR TCA 90 bp	TTGTCTCTAGCTACTGCAGAAAACGCTCTATGCTCAGCCTTCAGGTTGATCCCCAGTCACATGGGACACTaGAGGGGCAACTCCGGTCCC	+
Preference number: 4 (lower is better) Translates to: LSLATAENALCSAFRLIPSHMGH*RGNSGP Trigger: GGGACCGGAGTTGCCCCTTCAGTGTCCCATGTGACT...GGGGATCAACCTGAAGGCTGAGCATAGAGCGTTTTCTGCAGTAGCTAGAGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR TCA 90 bp	TTGTCTCTAGCTACTGCAGAAAACGCTCTATGCTCAGCCTTCAGGTTGATCCCCTGGGGAGGTCCCAGCTaGAGGTGTCTACAGGCACCT	+
Preference number: 4 (lower is better) Translates to: LSLATAENALCSAFRLIPWGGPS*RCLQAP Trigger: AGGTGCCTGTAGACACCTTCAGCTGGGACCTCCCCA...GGGGATCAACCTGAAGGCTGAGCATAGAGCGTTTTCTGCAGTAGCTAGAGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR TCA 90 bp	ACTACGAGGGTAAATACTTCACTCTGGGTGAATCTTGGCTCCGCAAGGACTGTTGCCTGGGGCAGCATATaGGACCAGGGTGGGGCTTGT	+
Preference number: 4 (lower is better) Translates to: TTRVNTSLWVNLGSARTVAWGSI*DQGGAC Trigger: ACAAGCCCCACCCTGGTCTCATATGCTGCCCCAGGC...AACAGTCCTTGCGGAGCCAAGATTCACCCAGAGTGAAGTATTTACCCTCGTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	TTGTCTCTAGCTACTGCAGAAAACGCTCTATGCTCAGCCTTCAGGTTGATCCCCAGGCCAGAGCCTCACTaGATGCAGAAGTGGCGGTCG	+
Preference number: 4 (lower is better) Translates to: LSLATAENALCSAFRLIPRPEPH*MQKWRS Trigger: CGACCGCCACTTCTGCATCCAGTGAGGCTCTGGCCT...GGGGATCAACCTGAAGGCTGAGCATAGAGCGTTTTCTGCAGTAGCTAGAGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	CAGAGGAGTCTGAGCCGAAGCCAGGAAGGGTCTGAGAGCGCTGAGCAGCAGGAATGTAGGAATATGATTTaGACTCTCCAGGGTCTAGCC	+
Preference number: 4 (lower is better) Translates to: QRSLSRSQEGSESAEQQECRNMI*TLQGLA Trigger: GGCTAGACCCTGGAGAGTCCAAATCATATTCCTACA...TTCCTGCTGCTCAGCGCTCTCAGACCCTTCCTGGCTTCGGCTCAGACTCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	CAGAGGAGTCTGAGCCGAAGCCAGGAAGGGTCTGAGAGCGCTGAGCAGCAGGAACGCGCTGGCAGCCAATaGTCAATTTGTAGACATATT	+
Preference number: 4 (lower is better) Translates to: QRSLSRSQEGSESAEQQERAGSQ*SICRHI Trigger: AATATGTCTACAAATTGACCATTGGCTGCCAGCGCG...TTCCTGCTGCTCAGCGCTCTCAGACCCTTCCTGGCTTCGGCTCAGACTCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	GCTGATTGCTCACTGCTGCTGCCACTTTCAGGGAAACCACTAGCAGCTGCCAACCCTCTAAGAATGGACTaGATGGCGCCACAGCCTCAT	+
Preference number: 4 (lower is better) Translates to: ADCSLLLPLSGKPLAAANPLRMD*MAPQPH Trigger: ATGAGGCTGTGGCGCCATCCAGTCCATTCTTAGAGG...GTTGGCAGCTGCTAGTGGTTTCCCTGAAAGTGGCAGCAGCAGTGAGCAATCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 72 bp	TGCCCTATAACCTCAGAAAGGAATTCTGCTCAGCCTTaGCCTCCTTCCAGAAGTCGCCACAGCCACAGGCCT	+
Preference number: 4 (lower is better) Translates to: CPITSERNSAQP*PPSRSRHSHRP Trigger: AGGCCTGTGGCTGTGGCGACTTCTGGAAGGAGGCAAAGGCTGAGCAGAATTCCTTTCTGAGGTTATAGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 72 bp	ACACCTTATGACTTGCATGGATGGTGCCTTAGCAGCTaGGGCCTCACCTCCTCCTGCCTTTGCTTTCTGGGA	+
Preference number: 4 (lower is better) Translates to: TPYDLHGWCLSS*GLTSSCLCFLG Trigger: TCCCAGAAAGCAAAGGCAGGAGGAGGTGAGGCCCAAGCTGCTAAGGCACCATCCATGCAAGTCATAAGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR TCA 90 bp	ACTCCCAACCTTTGGTTCTCCAGGGCTCAGCATCCTATTGACTTCCCTGCTGAGGGGAAGTGGACATCTTaGAGACCAGTCAGCACGAGA	+
Preference number: 4 (lower is better) Translates to: TPNLWFSRAQHPIDFPAEGKWTS*RPVSTR Trigger: TCTCGTGCTGACTGGTCTTCAAGATGTCCACTTCCC...CTCAGCAGGGAAGTCAATAGGATGCTGAGCCCTGGAGAACCAAAGGTTGGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 72 bp	ACCTGCGCTTCAGGAGACTGGTTCTCACTTCGCAGTTaGGTGTGGCTCAGTAATGTCCGCCCAGTCTCATTT	+
Preference number: 4 (lower is better) Translates to: TCASGDWFSLRS*VWLSNVRPVSF Trigger: AAATGAGACTGGGCGGACATTACTGAGCCACACCAAACTGCGAAGTGAGAACCAGTCTCCTGAAGCGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 72 bp	GTGTCTGTTCAGCCACAAGCTATGAATTTAGGGGCTTaGCTGGGCAGAAAGCAGCCCCTTCCAGGACTCCTT	+
Preference number: 4 (lower is better) Translates to: VSVQPQAMNLGA*LGRKQPLPGLL Trigger: AAGGAGTCCTGGAAGGGGCTGCTTTCTGCCCAGCAAAGCCCCTAAATTCATAGCTTGTGGCTGAACAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR GCA 90 bp	GCTGGAGGACCATCTGCTTGGTGGTGTCTCTGTTCCTACAGCACCCGGGAGTTAACCCGTTCTTCAGTCTaGAAGCTTACTGAAAACTGC	+
Preference number: 4 (lower is better) Translates to: AGGPSAWWCLCSYSTRELTRSSV*KLTENC Trigger: GCAGTTTTCAGTAAGCTTGCAGACTGAAGAACGGGT...TAACTCCCGGGTGCTGTAGGAACAGAGACACCACCAAGCAGATGGTCCTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR TCA 90 bp	AGGGTAAATACTTCACTCTGGGTGAATCTTGGCTCCGCAAGGACTGTTTCCATTTCCTGGTGCCGGGCATaGGTCACATGGGACACTGAA	+
Preference number: 4 (lower is better) Translates to: RVNTSLWVNLGSARTVSISWCRA*VTWDTE Trigger: TTCAGTGTCCCATGTGACTCATGCCCGGCACCAGGA...AATGGAAACAGTCCTTGCGGAGCCAAGATTCACCCAGAGTGAAGTATTTACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 72 bp	CAGCAGAAGCCTTCAGCTGGGCACGGCTACTTGCTGTaGTCCAGAGAGGACATCATTTCTGTCTTTGTGCTT	+
Preference number: 4 (lower is better) Translates to: QQKPSAGHGYLL*SREDIISVFVL Trigger: AAGCACAAAGACAGAAATGATGTCCTCTCTGGACAACAGCAAGTAGCCGTGCCCAGCTGAAGGCTTCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 72 bp	AGTCCACAGCAGAAGCCTTCAGCTGGGCACGGCTACTaGCTGTTGTCCAGAGAGGACATCATTTCTGTCTTT	+
Preference number: 4 (lower is better) Translates to: SPQQKPSAGHGY*LLSREDIISVF Trigger: AAAGACAGAAATGATGTCCTCTCTGGACAACAGCAAGTAGCCGTGCCCAGCTGAAGGCTTCTGCTGTGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 72 bp	AGGACAGCACAGGTCTTAGGAGGCAGCAGGGATACCTaGGAGCATACATGTGAAAGACAGAAGTTGGTCTGG	+
Preference number: 4 (lower is better) Translates to: RTAQVLGGSRDT*EHTCERQKLVW Trigger: CCAGACCAACTTCTGTCTTTCACATGTATGCTCCAAGGTATCCCTGCTGCCTCCTAAGACCTGTGCTGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	AGGGTAAATACTTCACTCTGGGTGAATCTTGGCTCCGCAAGGACTGTTTCCATTCCTCTCACCTCGGTGTaGCAGAAAGACAGTCTGGCT	+
Preference number: 4 (lower is better) Translates to: RVNTSLWVNLGSARTVSIPLTSV*QKDSLA Trigger: AGCCAGACTGTCTTTCTGCCACACCGAGGTGAGAGG...AATGGAAACAGTCCTTGCGGAGCCAAGATTCACCCAGAGTGAAGTATTTACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	TTTACTGTCCTGACTCCCAACCTTTGGTTCTCCAGGGCTCAGCATCCTATTGACCTGATATTGTACAGATaGAGGCTGCGGCAGGATGTG	+
Preference number: 4 (lower is better) Translates to: FTVLTPNLWFSRAQHPIDLILYR*RLRQDV Trigger: CACATCCTGCCGCAGCCTCCATCTGTACAATATCAG...GTCAATAGGATGCTGAGCCCTGGAGAACCAAAGGTTGGGAGTCAGGACAGTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	GTTCAGCCACAAGCTATGAATTTAGGGGCTTTGCTGGGCAGAAAGCAGCCCCTTGAGAGAAGCTGGTTCTaGTTGTATGTAGGCAGGACT	+
Preference number: 4 (lower is better) Translates to: VQPQAMNLGALLGRKQPLERSWF*LYVGRT Trigger: AGTCCTGCCTACATACAACCAGAACCAGCTTCTCTC...AAGGGGCTGCTTTCTGCCCAGCAAAGCCCCTAAATTCATAGCTTGTGGCTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	ACTACGAGGGTAAATACTTCACTCTGGGTGAATCTTGGCTCCGCAAGGACTGTTACTTCAAGGACACAATaGCAGTGCAGAAGCCAGGGG	+
Preference number: 4 (lower is better) Translates to: TTRVNTSLWVNLGSARTVTSRTQ*QCRSQG Trigger: CCCCTGGCTTCTGCACTGCCATTGTGTCCTTGAAGT...AACAGTCCTTGCGGAGCCAAGATTCACCCAGAGTGAAGTATTTACCCTCGTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR TCA 90 bp	ACTCCCAACCTTTGGTTCTCCAGGGCTCAGCATCCTATTGACTTCCCTGCTGAGATTTGTAGACATATTTaGCTGACTGACCCCGAAAGG	+
Preference number: 4 (lower is better) Translates to: TPNLWFSRAQHPIDFPAEICRHI*LTDPER Trigger: CCTTTCGGGGTCAGTCAGTCAAATATGTCTACAAAT...CTCAGCAGGGAAGTCAATAGGATGCTGAGCCCTGGAGAACCAAAGGTTGGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	TTTACTGTCCTGACTCCCAACCTTTGGTTCTCCAGGGCTCAGCATCCTATTGACCAGAAGTACCAATCCTaGTTCTCGGGATGTTACAAA	+
Preference number: 4 (lower is better) Translates to: FTVLTPNLWFSRAQHPIDQKYQS*FSGCYK Trigger: TTTGTAACATCCCGAGAACCAGGATTGGTACTTCTG...GTCAATAGGATGCTGAGCCCTGGAGAACCAAAGGTTGGGAGTCAGGACAGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
3UTR CAA 72 bp	ACTTGCTGTTGTCCAGAGAGGACATCATTTCTGTCTTaGTGCTTTAGCCTCAAGCAGTGGCGATTTTCTGAG	+
Preference number: 4 (lower is better) Translates to: TCCCPERTSFLS*CFSLKQWRFSE Trigger: CTCAGAAAATCGCCACTGCTTGAGGCTAAAGCACAAAGACAGAAATGATGTCCTCTCTGGACAACAGCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR GCA 90 bp	AGGGTAAATACTTCACTCTGGGTGAATCTTGGCTCCGCAAGGACTGTTTCCATTAAGCTTACTGAAAACTaGAGACAAGCTACGGTTCCT	+
Preference number: 4 (lower is better) Translates to: RVNTSLWVNLGSARTVSIKLTEN*RQATVP Trigger: AGGAACCGTAGCTTGTCTGCAGTTTTCAGTAAGCTT...AATGGAAACAGTCCTTGCGGAGCCAAGATTCACCCAGAGTGAAGTATTTACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS-3UTR CCA 90 bp	TTTACTGTCCTGACTCCCAACCTTTGGTTCTCCAGGGCTCAGCATCCTATTGACAAACAGAATTTTGGGTaGAGTAGAAAGGATACACTG	+
Preference number: 4 (lower is better) Translates to: FTVLTPNLWFSRAQHPIDKQNFG*SRKDTL Trigger: CAGTGTATCCTTTCTACTCCACCCAAAATTCTGTTT...GTCAATAGGATGCTGAGCCCTGGAGAACCAAAGGTTGGGAGTCAGGACAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS GCA 90 bp	CTGGCAGTGGATCTGGGCACTGGCCCAGGCCAGAGCCTCACTGGATaGAGAAGTGGCGGTCGGGGGAAGGGGATTAGTGACAGTCACCAC	+
Preference number: 5 (lower is better) Translates to: LAVDLGTGPGQSLTG*RSGGRGKGISDSHH Trigger: GTGGTGACTGTCACTAATCCCCTTCCCCCGACCGCCACTTCTGCATCCAGTGAGGCTCTGGCCTGGGCCAGTGCCCAGATCCACTGCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS GCA 90 bp	GCTGTCAGGCTGGACGTCCGGCTGACTAGAGTCAGGGGGTGGCAGTaGTACTCGACTCTCGCTGGCATGGAACTGGCAGTGGATCTGGGC	+
Preference number: 5 (lower is better) Translates to: AVRLDVRLTRVRGWQ*YSTLAGMELAVDLG Trigger: GCCCAGATCCACTGCCAGTTCCATGCCAGCGAGAGTCGAGTAGCACTGCCACCCCCTGACTCTAGTCAGCCGGACGTCCAGCCTGACAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS CCA 90 bp	GGCAGTGCTACTCGACTCTCGCTGGCATGGAACTGGCAGTGGATCTaGGCACTGGCCCAGGCCAGAGCCTCACTGGATGCAGAAGTGGCG	+
Preference number: 5 (lower is better) Translates to: GSATRLSLAWNWQWI*ALAQARASLDAEVA Trigger: CGCCACTTCTGCATCCAGTGAGGCTCTGGCCTGGGCCAGTGCCCAGATCCACTGCCAGTTCCATGCCAGCGAGAGTCGAGTAGCACTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS TCA 90 bp	CGGTGTGGCAGAAAGACAGTCTGGCTGTCAGGCTGGACGTCCGGCTaGCTAGAGTCAGGGGGTGGCAGTGCTACTCGACTCTCGCTGGCA	+
Preference number: 5 (lower is better) Translates to: RCGRKTVWLSGWTSG*LESGGGSATRLSLA Trigger: TGCCAGCGAGAGTCGAGTAGCACTGCCACCCCCTGACTCTAGTCAGCCGGACGTCCAGCCTGACAGCCAGACTGTCTTTCTGCCACACCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS TCA 90 bp	AAGCTGGTTCTGGTTGTATGTAGGCAGGACTCCTGGTGCCGGGCATaGGTCACATGGGACACTGAAGGGGCAACTCCGGTCCCGCGGCGT	+
Preference number: 5 (lower is better) Translates to: KLVLVVCRQDSWCRA*VTWDTEGATPVPRR Trigger: ACGCCGCGGGACCGGAGTTGCCCCTTCAGTGTCCCATGTGACTCATGCCCGGCACCAGGAGTCCTGCCTACATACAACCAGAACCAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS CCA 90 bp	AGTCTGGCTGTCAGGCTGGACGTCCGGCTGACTAGAGTCAGGGGGTaGCAGTGCTACTCGACTCTCGCTGGCATGGAACTGGCAGTGGAT	+
Preference number: 5 (lower is better) Translates to: SLAVRLDVRLTRVRG*QCYSTLAGMELAVD Trigger: ATCCACTGCCAGTTCCATGCCAGCGAGAGTCGAGTAGCACTGCCACCCCCTGACTCTAGTCAGCCGGACGTCCAGCCTGACAGCCAGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS GCA 90 bp	TCTACAGGCACCTGTTCAGGCCCTGTCCAGGTCGCAGGCTCAGGCTaGTCCAATGGCGGCAGAAGTACCAATCCTGGTTCTCGGGATGTT	+
Preference number: 5 (lower is better) Translates to: STGTCSGPVQVAGSG*SNGGRSTNPGSRDV Trigger: AACATCCCGAGAACCAGGATTGGTACTTCTGCCGCCATTGGAGCAGCCTGAGCCTGCGACCTGGACAGGGCCTGAACAGGTGCCTGTAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9
CDS TCA 90 bp	GTTCACGCGCTGGCAGCCAATGGTCAATTTGTAGACATATTTGACTaGCTGACCCCGAAAGGAAGGCGGGCCCTCCGTGGGCAGCACTTC	+
Preference number: 5 (lower is better) Translates to: VHALAANGQFVDIFD*LTPKGRRALRGQHF Trigger: GAAGTGCTGCCCACGGAGGGCCCGCCTTCCTTTCGGGGTCAGTCAGTCAAATATGTCTACAAATTGACCATTGGCTGCCAGCGCGTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS TCA 90 bp	GTGAGTTCACGCGCTGGCAGCCAATGGTCAATTTGTAGACATATTTaGCTGACTGACCCCGAAAGGAAGGCGGGCCCTCCGTGGGCAGCA	+
Preference number: 5 (lower is better) Translates to: VSSRAGSQWSICRHI*LTDPERKAGPPWAA Trigger: TGCTGCCCACGGAGGGCCCGCCTTCCTTTCGGGGTCAGTCAGTCAAATATGTCTACAAATTGACCATTGGCTGCCAGCGCGTGAACTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS GCA 90 bp	TTCCAGTTTACCTGTTCAGGCCCTGTCCAGGTCGCAGGCTCAGGCTaGTCCAATGGCGGCAGAAGTACCAATCCTGGTTCTCGGGATGTT	+
Preference number: 5 (lower is better) Translates to: FQFTCSGPVQVAGSG*SNGGRSTNPGSRDV Trigger: AACATCCCGAGAACCAGGATTGGTACTTCTGCCGCCATTGGAGCAGCCTGAGCCTGCGACCTGGACAGGGCCTGAACAGGTAAACTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117140.8
CDS CCA 90 bp	CACCTGTTCAGGCCCTGTCCAGGTCGCAGGCTCAGGCTGCTCCAATaGCGGCAGAAGTACCAATCCTGGTTCTCGGGATGTTACAAATTC	+
Preference number: 5 (lower is better) Translates to: HLFRPCPGRRLRLLQ*RQKYQSWFSGCYKF Trigger: GAATTTGTAACATCCCGAGAACCAGGATTGGTACTTCTGCCGCCATTGGAGCAGCCTGAGCCTGCGACCTGGACAGGGCCTGAACAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9
CDS CCA 90 bp	TACCTGTTCAGGCCCTGTCCAGGTCGCAGGCTCAGGCTGCTCCAATaGCGGCAGAAGTACCAATCCTGGTTCTCGGGATGTTACAAATTC	+
Preference number: 5 (lower is better) Translates to: YLFRPCPGRRLRLLQ*RQKYQSWFSGCYKF Trigger: GAATTTGTAACATCCCGAGAACCAGGATTGGTACTTCTGCCGCCATTGGAGCAGCCTGAGCCTGCGACCTGGACAGGGCCTGAACAGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117140.8
CDS-3UTR CAA 90 bp	CATTCCCAGCCATGGTATGAGACGGGAGCCCAAGGAGAGAGAAACTCAGGAGTCCTTGTAGGAAGCACTTaGATGGGGAGGTCCCAGCTG	+
Preference number: 5 (lower is better) Translates to: HSQPWYETGAQGERNSGVLVGST*MGRSQL Trigger: CAGCTGGGACCTCCCCATCAAAGTGCTTCCTACAAG...GACTCCTGAGTTTCTCTCTCCTTGGGCTCCCGTCTCATACCATGGCTGGGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS CCA 90 bp	GCCATGAGTCCTTCTTCCCACTGTCATCCTCCTCTAAGAATGGACTaGATGGCGCCACAGCCTCATCCTGGGGGAAGTGGACATCTTGAA	+
Preference number: 5 (lower is better) Translates to: AMSPSSHCHPPLRMD*MAPQPHPGGSGHLE Trigger: TTCAAGATGTCCACTTCCCCCAGGATGAGGCTGTGGCGCCATCCAGTCCATTCTTAGAGGAGGATGACAGTGGGAAGAAGGACTCATGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS-3UTR CAA 90 bp	GGACCATCTGCTTGGTGGTGTCTCTGTTCCTACAGCACCCGGGAGTTAGCAGCAAGAAGCTGGTTCTGGTaGTATGTAGGCAGGACTCCT	+
Preference number: 5 (lower is better) Translates to: GPSAWWCLCSYSTRELAARSWFW*YVGRTP Trigger: AGGAGTCCTGCCTACATACAACCAGAACCAGCTTCT...TGCTGCTAACTCCCGGGTGCTGTAGGAACAGAGACACCACCAAGCAGATGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS TCA 90 bp	GAAGACCAGTCAGCACGAGAACTCTCAGAGGAACCCGGAGTAAGGTaGTGGGTGAGTTCACGCGCTGGCAGCCAATGGTCAATTTGTAGA	+
Preference number: 5 (lower is better) Translates to: EDQSARELSEEPGVR*WVSSRAGSQWSICR Trigger: TCTACAAATTGACCATTGGCTGCCAGCGCGTGAACTCACCCATCACCTTACTCCGGGTTCCTCTGAGAGTTCTCGTGCTGACTGGTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS-3UTR CAA 90 bp	CTCTTGTTTTCATGCCCTCACCTCAGGAAACAGAGTTCCAGCCTGTCCAGCTCTAGTCTGTACACAGATTaGAAGATACCGAACGTCCCG	+
Preference number: 5 (lower is better) Translates to: LLFSCPHLRKQSSSLSSSSLYTD*KIPNVP Trigger: CGGGACGTTCGGTATCTTCAAATCTGTGTACAGACT...AGAGCTGGACAGGCTGGAACTCTGTTTCCTGAGGTGAGGGCATGAAAACAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107886.9
CDS GCA 90 bp	TATTCGGGCTGTACCCGTTCTTCAGTCTGCAAGCTTACTGAAAACTaGAGACAAGCTACGGTTCCTTCCCCTAAATTTAAGGTTCCCACC	+
Preference number: 5 (lower is better) Translates to: YSGCTRSSVCKLTEN*RQATVPSPKFKVPT Trigger: GGTGGGAACCTTAAATTTAGGGGAAGGAACCGTAGCTTGTCTGCAGTTTTCAGTAAGCTTGCAGACTGAAGAACGGGTACAGCCCGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS TCA 72 bp	GGACTCCTGGTGCCGGGCATGAGTCACATGGGACACTaGAGGGGCAACTCCGGTCCCGCGGCGTCGCTGGTA	+
Preference number: 6 (lower is better) Translates to: GLLVPGMSHMGH*RGNSGPAASLV Trigger: TACCAGCGACGCCGCGGGACCGGAGTTGCCCCTTCAGTGTCCCATGTGACTCATGCCCGGCACCAGGAGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS CCA 72 bp	TCAGGGGGTGGCAGTGCTACTCGACTCTCGCTGGCATaGAACTGGCAGTGGATCTGGGCACTGGCCCAGGCC	+
Preference number: 6 (lower is better) Translates to: SGGGSATRLSLA*NWQWIWALAQA Trigger: GGCCTGGGCCAGTGCCCAGATCCACTGCCAGTTCCATGCCAGCGAGAGTCGAGTAGCACTGCCACCCCCTGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS GCA 72 bp	GATCTGGGCACTGGCCCAGGCCAGAGCCTCACTGGATaGAGAAGTGGCGGTCGGGGGAAGGGGATTAGTGAC	+
Preference number: 6 (lower is better) Translates to: DLGTGPGQSLTG*RSGGRGKGISD Trigger: GTCACTAATCCCCTTCCCCCGACCGCCACTTCTGCATCCAGTGAGGCTCTGGCCTGGGCCAGTGCCCAGATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS GCA 72 bp	CTGGACGTCCGGCTGACTAGAGTCAGGGGGTGGCAGTaGTACTCGACTCTCGCTGGCATGGAACTGGCAGTG	+
Preference number: 6 (lower is better) Translates to: LDVRLTRVRGWQ*YSTLAGMELAV Trigger: CACTGCCAGTTCCATGCCAGCGAGAGTCGAGTAGCACTGCCACCCCCTGACTCTAGTCAGCCGGACGTCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS CCA 72 bp	AGTGCTACTCGACTCTCGCTGGCATGGAACTGGCAGTaGATCTGGGCACTGGCCCAGGCCAGAGCCTCACTG	+
Preference number: 6 (lower is better) Translates to: SATRLSLAWNWQ*IWALAQARASL Trigger: CAGTGAGGCTCTGGCCTGGGCCAGTGCCCAGATCCACTGCCAGTTCCATGCCAGCGAGAGTCGAGTAGCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS CCA 72 bp	GTCAGGCTGGACGTCCGGCTGACTAGAGTCAGGGGGTaGCAGTGCTACTCGACTCTCGCTGGCATGGAACTG	+
Preference number: 6 (lower is better) Translates to: VRLDVRLTRVRG*QCYSTLAGMEL Trigger: CAGTTCCATGCCAGCGAGAGTCGAGTAGCACTGCCACCCCCTGACTCTAGTCAGCCGGACGTCCAGCCTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS TCA 72 bp	TGTACAGATGGAGGCTGCGGCAGGATGTGGCAGCCATaGGACGCTCCCCAGCTAGCTCAGCCAGCCATGAGT	+
Preference number: 6 (lower is better) Translates to: CTDGGCGRMWQP*DAPQLAQPAMS Trigger: ACTCATGGCTGGCTGAGCTAGCTGGGGAGCGTCTCATGGCTGCCACATCCTGCCGCAGCCTCCATCTGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS CCA 72 bp	AGGCCCTGTCCAGGTCGCAGGCTCAGGCTGCTCCAATaGCGGCAGAAGTACCAATCCTGGTTCTCGGGATGT	+
Preference number: 6 (lower is better) Translates to: RPCPGRRLRLLQ*RQKYQSWFSGC Trigger: ACATCCCGAGAACCAGGATTGGTACTTCTGCCGCCATTGGAGCAGCCTGAGCCTGCGACCTGGACAGGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS TCA 72 bp	AGAAAGACAGTCTGGCTGTCAGGCTGGACGTCCGGCTaGCTAGAGTCAGGGGGTGGCAGTGCTACTCGACTC	+
Preference number: 6 (lower is better) Translates to: RKTVWLSGWTSG*LESGGGSATRL Trigger: GAGTCGAGTAGCACTGCCACCCCCTGACTCTAGTCAGCCGGACGTCCAGCCTGACAGCCAGACTGTCTTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS TCA 72 bp	CTGGTTGTATGTAGGCAGGACTCCTGGTGCCGGGCATaGGTCACATGGGACACTGAAGGGGCAACTCCGGTC	+
Preference number: 6 (lower is better) Translates to: LVVCRQDSWCRA*VTWDTEGATPV Trigger: GACCGGAGTTGCCCCTTCAGTGTCCCATGTGACTCATGCCCGGCACCAGGAGTCCTGCCTACATACAACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS TCA 72 bp	CGCGCTGGCAGCCAATGGTCAATTTGTAGACATATTTaGCTGACTGACCCCGAAAGGAAGGCGGGCCCTCCG	+
Preference number: 6 (lower is better) Translates to: RAGSQWSICRHI*LTDPERKAGPP Trigger: CGGAGGGCCCGCCTTCCTTTCGGGGTCAGTCAGTCAAATATGTCTACAAATTGACCATTGGCTGCCAGCGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS TCA 72 bp	TCAGCACGAGAACTCTCAGAGGAACCCGGAGTAAGGTaGTGGGTGAGTTCACGCGCTGGCAGCCAATGGTCA	+
Preference number: 6 (lower is better) Translates to: SARELSEEPGVR*WVSSRAGSQWS Trigger: TGACCATTGGCTGCCAGCGCGTGAACTCACCCATCACCTTACTCCGGGTTCCTCTGAGAGTTCTCGTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS TCA 72 bp	AGATACCGAACGTCCCGACTTTCCCTCGGCCATCGCTaGTATTGTACAGATGGAGGCTGCGGCAGGATGTGG	+
Preference number: 6 (lower is better) Translates to: RYRTSRLSLGHR*YCTDGGCGRMW Trigger: CCACATCCTGCCGCAGCCTCCATCTGTACAATATCAGCGATGGCCGAGGGAAAGTCGGGACGTTCGGTATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS CCA 72 bp	CCTTCTTCCCACTGTCATCCTCCTCTAAGAATGGACTaGATGGCGCCACAGCCTCATCCTGGGGGAAGTGGA	+
Preference number: 6 (lower is better) Translates to: PSSHCHPPLRMD*MAPQPHPGGSG Trigger: TCCACTTCCCCCAGGATGAGGCTGTGGCGCCATCCAGTCCATTCTTAGAGGAGGATGACAGTGGGAAGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS TCA 72 bp	CTGGCAGCCAATGGTCAATTTGTAGACATATTTGACTaGCTGACCCCGAAAGGAAGGCGGGCCCTCCGTGGG	+
Preference number: 6 (lower is better) Translates to: LAANGQFVDIFD*LTPKGRRALRG Trigger: CCCACGGAGGGCCCGCCTTCCTTTCGGGGTCAGTCAGTCAAATATGTCTACAAATTGACCATTGGCTGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS CAA 72 bp	GTTCCCACCACGTCTTCGCCAAGTCTGTACACAGATTaGAAGATACCGAACGTCCCGACTTTCCCTCGGCCA	+
Preference number: 6 (lower is better) Translates to: VPTTSSPSLYTD*KIPNVPTFPRP Trigger: TGGCCGAGGGAAAGTCGGGACGTTCGGTATCTTCAAATCTGTGTACAGACTTGGCGAAGACGTGGTGGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS TCA 72 bp	TTCCCACCACGTCTTCGCCAAGTCTGTACACAGATTTaGAGATACCGAACGTCCCGACTTTCCCTCGGCCAT	+
Preference number: 6 (lower is better) Translates to: FPPRLRQVCTQI*RYRTSRLSLGH Trigger: ATGGCCGAGGGAAAGTCGGGACGTTCGGTATCTTCAAATCTGTGTACAGACTTGGCGAAGACGTGGTGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8
CDS GCA 72 bp	TGTACCCGTTCTTCAGTCTGCAAGCTTACTGAAAACTaGAGACAAGCTACGGTTCCTTCCCCTAAATTTAAG	+
Preference number: 6 (lower is better) Translates to: CTRSSVCKLTEN*RQATVPSPKFK Trigger: CTTAAATTTAGGGGAAGGAACCGTAGCTTGTCTGCAGTTTTCAGTAAGCTTGCAGACTGAAGAACGGGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030190.9 ENSMUST00000107886.9 ENSMUST00000117140.8

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