Pregenerated sensors for RGMB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048027Ensembl transcript IDs: ENSMUST00000170578.3, ENSMUST00000231281.2, ENSMUST00000232638.2, ENSMUST00000238157.2
Found 233 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAACAGCCAGTGCTTGGAATCCAGAGGGGAGGTTAAGGAGATGCTaGAGCAGAGCCAGAGAGCACTGTCAGGACTCCAAGCAGCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: LTASAWNPEGRLRRC*SRAREHCQDSKQPR Trigger: CCTTGGCTGCTTGGAGTCCTGACAGTGCTCTCTGGCTCTGCTCCAGCATCTCCTTAACCTCCCCTCTGGATTCCAAGCACTGGCTGTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR GCA 90 bp | ACACTAACAGCCAGTGCTTGGAATCCAGAGGGGAGGTTAAGGAGATaGTGGAGCAGAGCCAGAGAGCACTGTCAGGACTCCAAGCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: TLTASAWNPEGRLRR*WSRAREHCQDSKQP Trigger: TGGCTGCTTGGAGTCCTGACAGTGCTCTCTGGCTCTGCTCCAGCATCTCCTTAACCTCCCCTCTGGATTCCAAGCACTGGCTGTTAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR CCA 90 bp | AAACCAGAGCGAGAACTGGATGTCTGCAGTGTGTCCTGCTGGCCCTaGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGCTACAAGAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: KPERELDVCSVSCWP*VPVSVSLQASYKRE Trigger: TTCTCTCTTGTAGCTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAGACATCCAGTTCTCGCTCTGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR CCA 90 bp | CTCATAAAACCAGAGCGAGAACTGGATGTCTGCAGTGTGTCCTGCTaGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGCTACAAG | + |
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Preference number: 1 (lower is better) Translates to: LIKPERELDVCSVSC*PWVPVSVSLQASYK Trigger: CTTGTAGCTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAGACATCCAGTTCTCGCTCTGGTTTTATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR GCA 90 bp | ATTCTCATAAAACCAGAGCGAGAACTGGATGTCTGCAGTGTGTCCTaGTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: ILIKPERELDVCSVS*WPWVPVSVSLQASY Trigger: GTAGCTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAGACATCCAGTTCTCGCTCTGGTTTTATGAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR TCA 90 bp | GCTTACTCCACTCAGCATCCCGCCTGGCACCAGGTGGCGCTTTCCTaGGCCTGTTTCTTCTCCCAATTATTCTACCCTCTATTTCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: AYSTQHPAWHQVALS*ACFFSQLFYPLFLQ Trigger: TTGAAGAAATAGAGGGTAGAATAATTGGGAGAAGAAACAGGCTCAGGAAAGCGCCACCTGGTGCCAGGCGGGATGCTGAGTGGAGTAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR GCA 90 bp | ACTGAGTGCCTTGGTAAATCAGTAGCAATCAGTAGCCATGGGAAGTaGAGGGGGAGCAAGCAGAGGCGGTACAAACTAGTCACCTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: TECLGKSVAISSHGK*RGSKQRRYKLVTSK Trigger: TTTGGAGGTGACTAGTTTGTACCGCCTCTGCTTGCTCCCCCTGCACTTCCCATGGCTACTGATTGCTACTGATTTACCAAGGCACTCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR CCA 90 bp | TGCAGGGGGAGCAAGCAGAGGCGGTACAAACTAGTCACCTCCAAATaGATCGCTGTGGTTGGTGTCTGTGTATATGCACTGTACATACTA | + |
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Preference number: 1 (lower is better) Translates to: CRGSKQRRYKLVTSK*IAVVGVCVYALYIL Trigger: TAGTATGTACAGTGCATATACACAGACACCAACCACAGCGATCCATTTGGAGGTGACTAGTTTGTACCGCCTCTGCTTGCTCCCCCTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR TCA 90 bp | CAAGCTACAAGAGAGAAGACACAGACACCACCACCCCAAATACGGTaGCAGCACATTGGGGGAGCATTGTATTATGTAGTTGACAATGTG | + |
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Preference number: 1 (lower is better) Translates to: QATREKTQTPPPQIR*QHIGGALYYVVDNV Trigger: CACATTGTCAACTACATAATACAATGCTCCCCCAATGTGCTGTCACCGTATTTGGGGTGGTGGTGTCTGTGTCTTCTCTCTTGTAGCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR TCA 90 bp | GACAGGGAAGGAGGGAGTTTAGTGGGACACTGGGAGAAACTCCTTTaGCTTTATTTACGAATGGTAAGTTACTTAGCCCTGACTGGTACT | + |
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Preference number: 1 (lower is better) Translates to: DREGGSLVGHWEKLL*LYLRMVSYLALTGT Trigger: AGTACCAGTCAGGGCTAAGTAACTTACCATTCGTAAATAAAGTCAAAGGAGTTTCTCCCAGTGTCCCACTAAACTCCCTCCTTCCCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
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| 3UTR GCA 90 bp | AAGAAAACCAATCCTACCTCCCACATATTTTCGGTATGGTTAAGTTaGCGATTTCCAGTTGGTCTTCACAAGACCTGGAGTGCAGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: KKTNPTSHIFSVWLS*RFPVGLHKTWSAVS Trigger: GGACACTGCACTCCAGGTCTTGTGAAGACCAACTGGAAATCGGCAACTTAACCATACCGAAAATATGTGGGAGGTAGGATTGGTTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR GCA 90 bp | TCCTTGGTTACCAAGAGGTTAGTAACTAAAGCACCATTGTGGGTTTaGCACTGGGAAGCCTGGCTTATGGCCATAACATTTACTATAGCT | + |
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Preference number: 1 (lower is better) Translates to: SLVTKRLVTKAPLWV*HWEAWLMAITFTIA Trigger: AGCTATAGTAAATGTTATGGCCATAAGCCAGGCTTCCCAGTGGCAAACCCACAATGGTGCTTTAGTTACTAACCTCTTGGTAACCAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
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| 3UTR CCA 90 bp | AAATTCGCTTGCTGTTTAGGACAACAGAAATCTTCTCTGGGTATCTaGAAAACTGGATGTCTGCTATGGAGAAAACCTGGGTGTGTACAC | + |
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Preference number: 1 (lower is better) Translates to: KFACCLGQQKSSLGI*KTGCLLWRKPGCVH Trigger: GTGTACACACCCAGGTTTTCTCCATAGCAGACATCCAGTTTTCCAGATACCCAGAGAAGATTTCTGTTGTCCTAAACAGCAAGCGAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR CCA 90 bp | GTTACCAAGAGGTTAGTAACTAAAGCACCATTGTGGGTTTGCCACTaGGAAGCCTGGCTTATGGCCATAACATTTACTATAGCTTCTAAC | + |
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Preference number: 1 (lower is better) Translates to: VTKRLVTKAPLWVCH*EAWLMAITFTIASN Trigger: GTTAGAAGCTATAGTAAATGTTATGGCCATAAGCCAGGCTTCCCAGTGGCAAACCCACAATGGTGCTTTAGTTACTAACCTCTTGGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
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| 3UTR CCA 90 bp | TTAACTTCCTTGGTTACCAAGAGGTTAGTAACTAAAGCACCATTGTaGGTTTGCCACTGGGAAGCCTGGCTTATGGCCATAACATTTACT | + |
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Preference number: 1 (lower is better) Translates to: LTSLVTKRLVTKAPL*VCHWEAWLMAITFT Trigger: AGTAAATGTTATGGCCATAAGCCAGGCTTCCCAGTGGCAAACCCACAATGGTGCTTTAGTTACTAACCTCTTGGTAACCAAGGAAGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
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| 3UTR GCA 90 bp | TTAAAAGAGGGTGTGAGATTACACAGGGCTTATACAGCACTGTTCTaGAACAGCCAATCCTTAACTTCCTTGGTTACCAAGAGGTTAGTA | + |
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Preference number: 1 (lower is better) Translates to: LKEGVRLHRAYTALF*NSQSLTSLVTKRLV Trigger: TACTAACCTCTTGGTAACCAAGGAAGTTAAGGATTGGCTGTTGCAGAACAGTGCTGTATAAGCCCTGTGTAATCTCACACCCTCTTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
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| 3UTR CCA 90 bp | TTCAAAGACAAGAAAACCAATCCTACCTCCCACATATTTTCGGTATaGTTAAGTTGCCGATTTCCAGTTGGTCTTCACAAGACCTGGAGT | + |
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Preference number: 1 (lower is better) Translates to: FKDKKTNPTSHIFSV*LSCRFPVGLHKTWS Trigger: ACTCCAGGTCTTGTGAAGACCAACTGGAAATCGGCAACTTAACCATACCGAAAATATGTGGGAGGTAGGATTGGTTTTCTTGTCTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR CCA 90 bp | TTGCTGTTTAGGACAACAGAAATCTTCTCTGGGTATCTGGAAAACTaGATGTCTGCTATGGAGAAAACCTGGGTGTGTACACTTCTGTTA | + |
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Preference number: 1 (lower is better) Translates to: LLFRTTEIFSGYLEN*MSAMEKTWVCTLLL Trigger: TAACAGAAGTGTACACACCCAGGTTTTCTCCATAGCAGACATCCAGTTTTCCAGATACCCAGAGAAGATTTCTGTTGTCCTAAACAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR CCA 90 bp | AGGTTAGTAACTAAAGCACCATTGTGGGTTTGCCACTGGGAAGCCTaGCTTATGGCCATAACATTTACTATAGCTTCTAACTCTCCAATA | + |
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Preference number: 1 (lower is better) Translates to: RLVTKAPLWVCHWEA*LMAITFTIASNSPI Trigger: TATTGGAGAGTTAGAAGCTATAGTAAATGTTATGGCCATAAGCCAGGCTTCCCAGTGGCAAACCCACAATGGTGCTTTAGTTACTAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
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| 3UTR TCA 90 bp | ACATTTTCCCTTCCTTGTTCAACGCAATCACAAGTTAATAGCTATTaGCAACTTCTGAACTTGGCACATGGCTACACAGGTGAACCAAAG | + |
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Preference number: 1 (lower is better) Translates to: TFSLPCSTQSQVNSY*QLLNLAHGYTGEPK Trigger: CTTTGGTTCACCTGTGTAGCCATGTGCCAAGTTCAGAAGTTGTCAATAGCTATTAACTTGTGATTGCGTTGAACAAGGAAGGGAAAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR TCA 90 bp | ATAACATTTACTATAGCTTCTAACTCTCCAATAAAGTACGTTTCCTaGTGGGCCACTGCCCCAGGCTTCACAGCTTTCTTTATTCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: ITFTIASNSPIKYVS*WATAPGFTAFFIQN Trigger: GTTCTGAATAAAGAAAGCTGTGAAGCCTGGGGCAGTGGCCCATCAGGAAACGTACTTTATTGGAGAGTTAGAAGCTATAGTAAATGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
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| 3UTR GCA 90 bp | TCCATACTTTCTTCCACCTTGCATTGCAGGAAGATATCAGTACCTTaGAGCTGGTATCAAAGGTCTCTCCCTATACATGATCAATTTCTT | + |
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Preference number: 1 (lower is better) Translates to: SILSSTLHCRKISVP*SWYQRSLPIHDQFL Trigger: AAGAAATTGATCATGTATAGGGAGAGACCTTTGATACCAGCTGCAAGGTACTGATATCTTCCTGCAATGCAAGGTGGAAGAAAGTATGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
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| 3UTR CCA 90 bp | CTTTCTTCCACCTTGCATTGCAGGAAGATATCAGTACCTTGCAGCTaGTATCAAAGGTCTCTCCCTATACATGATCAATTTCTTCAGAAT | + |
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Preference number: 1 (lower is better) Translates to: LSSTLHCRKISVPCS*YQRSLPIHDQFLQN Trigger: ATTCTGAAGAAATTGATCATGTATAGGGAGAGACCTTTGATACCAGCTGCAAGGTACTGATATCTTCCTGCAATGCAAGGTGGAAGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
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| 3UTR TCA 90 bp | CTACACACTCACTGTTTTTACACAGAAACTTACTCAATATACCTATaGACCACATCTACAGGTTTCTCTGCAAAGATTCGACACAATGGG | + |
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Preference number: 1 (lower is better) Translates to: LHTHCFYTETYSIYL*TTSTGFSAKIRHNG Trigger: CCCATTGTGTCGAATCTTTGCAGAGAAACCTGTAGATGTGGTTCATAGGTATATTGAGTAAGTTTCTGTGTAAAAACAGTGAGTGTGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR GCA 90 bp | TACAGGATTCTTAGATTCTTGAATTCCAGAAAACTCAAATTCGCTTaGTGTTTAGGACAACAGAAATCTTCTCTGGGTATCTGGAAAACT | + |
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Preference number: 1 (lower is better) Translates to: YRILRFLNSRKLKFA*CLGQQKSSLGIWKT Trigger: AGTTTTCCAGATACCCAGAGAAGATTTCTGTTGTCCTAAACAGCAAGCGAATTTGAGTTTTCTGGAATTCAAGAATCTAAGAATCCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGTGTGTCCTGCTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGTCCTTTCTGCCTTCTTaGGGATGGGGGCGGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LQCVLLALGASLCQSASKSFLPS*GWGRGW Trigger: CCACCCCCGCCCCCATCCCCAAGAAGGCAGAAAGGA...CTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR CCA 90 bp | GTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTGGCACCAGGTGGCGCTGGCCACCTCCAGACTaGTACATAACAAACATCAGC | + |
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Preference number: 2 (lower is better) Translates to: VPLPGLTPLSIPPGTRWRWPPPD*YITNIS Trigger: GCTGATGTTTGTTATGTACCAGTCTGGAGGTGGCCA...GCGCCACCTGGTGCCAGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR TCA 90 bp | GTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTGGCACCAGGTGGCGCGCTATTGACAACTTCTaGACTTGGCACATGGCTACA | + |
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Preference number: 2 (lower is better) Translates to: VPLPGLTPLSIPPGTRWRAIDNF*TWHMAT Trigger: TGTAGCCATGTGCCAAGTTCAGAAGTTGTCAATAGC...GCGCCACCTGGTGCCAGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR TCA 90 bp | GTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTGGCACCAGGTGGCGCCTTGGCAGTATGGTCTaGAATTCTTCTGGCTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: VPLPGLTPLSIPPGTRWRLGSMV*NSSGFG Trigger: TCCAAAGCCAGAAGAATTTCAGACCATACTGCCAAG...GCGCCACCTGGTGCCAGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR GCA 90 bp | ACTCAAGAACTCTGGGTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTGGGAGGTTAAGGAGATaGTGGAGCAGAGCCAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: TQELWVPLPGLTPLSIPPGRLRR*WSRARE Trigger: CTCTCTGGCTCTGCTCCAGCATCTCCTTAACCTCCC...AGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGACCCAGAGTTCTTGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR TCA 90 bp | GTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTGGCACCAGGTGGCGCAAAACACCCAAGAAATaGGGGTTTGCAAGTCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: VPLPGLTPLSIPPGTRWRKTPKK*GFASLQ Trigger: TTGAAGACTTGCAAACCCTCATTTCTTGGGTGTTTT...GCGCCACCTGGTGCCAGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGTGTGTCCTGCTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGAGGTTAAGGAGATGCTaGAGCAGAGCCAGAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LQCVLLALGASLCQSASKRLRRC*SRAREH Trigger: GTGCTCTCTGGCTCTGCTCCAGCATCTCCTTAACCT...CTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGTGTGTCCTGCTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGACATGGCTACACAGGTaGACCAAAGTGGCCATGCTT | + |
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Preference number: 2 (lower is better) Translates to: LQCVLLALGASLCQSASKTWLHR*TKVAML Trigger: AAGCATGGCCACTTTGGTTCACCTGTGTAGCCATGT...CTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR GCA 90 bp | ACTCAAGAACTCTGGGTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTGAACCAAAGTGGCCATaGTTGAAAGCTCAGGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: TQELWVPLPGLTPLSIPPEPKWP*LKAQGW Trigger: CCAACCCTGAGCTTTCAAGCATGGCCACTTTGGTTC...AGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGACCCAGAGTTCTTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR CCA 90 bp | ACTCAAGAACTCTGGGTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTGTCTGTCAGTCCCACTaGCCAACAGGACATGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: TQELWVPLPGLTPLSIPPVCQSH*PTGHVK Trigger: TTTGACATGTCCTGTTGGCCAGTGGGACTGACAGAC...AGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGACCCAGAGTTCTTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR TCA 90 bp | TTACTCCACTCAGCATCCCGCCTGGCACCAGGTGGCGCTTTCCTGAGCCTGTTTCGTCCCCTTTATAGCTaGCACCAGCAATACAATGCA | + |
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Preference number: 2 (lower is better) Translates to: LLHSASRLAPGGAFLSLFRPLYS*HQQYNA Trigger: TGCATTGTATTGCTGGTGTCAGCTATAAAGGGGACG...AAACAGGCTCAGGAAAGCGCCACCTGGTGCCAGGCGGGATGCTGAGTGGAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR TCA 90 bp | ACTCAAGAACTCTGGGTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTGGGGCAATGTGGTTTTaGGTATTTCCAAAGAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: TQELWVPLPGLTPLSIPPGAMWF*VFPKRD Trigger: GTCTCTCTTTGGAAATACTCAAAACCACATTGCCCC...AGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGACCCAGAGTTCTTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGTGTGTCCTGCTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGCCCATTTATGTGCTCTaGACTGCAAAACACACAGCA | + |
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Preference number: 2 (lower is better) Translates to: LQCVLLALGASLCQSASKPIYVL*TAKHTA Trigger: TGCTGTGTGTTTTGCAGTTCAGAGCACATAAATGGG...CTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR CCA 90 bp | ACTCAAGAACTCTGGGTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTAGGATCTCACTAAGCTaGCAGAGAGTTGAAAAGACG | + |
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Preference number: 2 (lower is better) Translates to: TQELWVPLPGLTPLSIPPRISLS*QRVEKT Trigger: CGTCTTTTCAACTCTCTGCCAGCTTAGTGAGATCCT...AGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGACCCAGAGTTCTTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR CCA 90 bp | TTACTCCACTCAGCATCCCGCCTGGCACCAGGTGGCGCTTTCCTGAGCCTGTTTACAGGTGAACCAAAGTaGCCATGCTTGAAAGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LLHSASRLAPGGAFLSLFTGEPK*PCLKAQ Trigger: CTGAGCTTTCAAGCATGGCCACTTTGGTTCACCTGT...AAACAGGCTCAGGAAAGCGCCACCTGGTGCCAGGCGGGATGCTGAGTGGAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR CCA 90 bp | TCTAACTGTGGCGTTCGTGGCTGGGGAAGACAGGGAAGGAGGGAGTTTAGTGGGCTCACAAGACCTCAGTaGGGAGGGCACATGTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: SNCGVRGWGRQGRREFSGLTRPQ*GGHMFF Trigger: GAAAAACATGTGCCCTCCCCACTGAGGTCTTGTGAG...CCCACTAAACTCCCTCCTTCCCTGTCTTCCCCAGCCACGAACGCCACAGTTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGTGTGTCCTGCTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGACTTTCCTCTCAAATTaGCACTTCAAAGGAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LQCVLLALGASLCQSASKTFLSN*HFKGRE Trigger: CTCCCTTCCTTTGAAGTGTCAATTTGAGAGGAAAGT...CTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGTGTGTCCTGCTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGAATCGTATCACTTCTTaGAACCAAAACACAGTTAGT | + |
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Preference number: 2 (lower is better) Translates to: LQCVLLALGASLCQSASKNRITS*NQNTVS Trigger: ACTAACTGTGTTTTGGTTCCAAGAAGTGATACGATT...CTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCTTCAGGCCGTACTCCTGGACCTCAGTATCAGAGGAACACTAACAGCCAGTGGTATTTACTTGAAATaGCCACCTCCAGACTGGTAC | + |
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Preference number: 2 (lower is better) Translates to: LLQAVLLDLSIRGTLTASGIYLK*PPPDWY Trigger: GTACCAGTCTGGAGGTGGCCATTTCAAGTAAATACC...ACTGGCTGTTAGTGTTCCTCTGATACTGAGGTCCAGGAGTACGGCCTGAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCTTCAGGCCGTACTCCTGGACCTCAGTATCAGAGGAACACTAACAGCCAGTGCACAGCAAGATGCCTaGTATTTACTTGAAATGGCC | + |
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Preference number: 2 (lower is better) Translates to: LLQAVLLDLSIRGTLTASAQQDA*YLLEMA Trigger: GGCCATTTCAAGTAAATACCAGGCATCTTGCTGTGC...ACTGGCTGTTAGTGTTCCTCTGATACTGAGGTCCAGGAGTACGGCCTGAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| 3UTR-3UTR TCA 90 bp | TATAAACATTTTGGAGATCCCCTAAAGTCTGCTGTGCTGGGACAGTCTCTGTGCTCTCTCACACACACATaGGCTCTCACAAGACCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: YKHFGDPLKSAVLGQSLCSLTHT*ALTRPQ Trigger: CTGAGGTCTTGTGAGAGCTCATGTGTGTGTGAGAGA...GCACAGAGACTGTCCCAGCACAGCAGACTTTAGGGGATCTCCAAAATGTTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR-3UTR TCA 90 bp | TATAAACATTTTGGAGATCCCCTAAAGTCTGCTGTGCTGGGACAGTCTCTGTGCAAGGCAGGAGTCAAATaGACAGCCACAGGACTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: YKHFGDPLKSAVLGQSLCKAGVK*TATGLQ Trigger: TTGAAGTCCTGTGGCTGTTCATTTGACTCCTGCCTT...GCACAGAGACTGTCCCAGCACAGCAGACTTTAGGGGATCTCCAAAATGTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR CAA 90 bp | CAAGAAAACCAATCCTACCTCCCACATATTTTCGGTATGGTTAAGTaGCCGATTTCCAGTTGGTCTTCACAAGACCTGGAGTGCAGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: QENQSYLPHIFGMVK*PISSWSSQDLECSV Trigger: GACACTGCACTCCAGGTCTTGTGAAGACCAACTGGAAATCGGCAACTTAACCATACCGAAAATATGTGGGAGGTAGGATTGGTTTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CAA 90 bp | AGACAGGGAAGGAGGGAGTTTAGTGGGACACTGGGAGAAACTCCTTaGACTTTATTTACGAATGGTAAGTTACTTAGCCCTGACTGGTAC | + |
|
Preference number: 2 (lower is better) Translates to: RQGRREFSGTLGETP*TLFTNGKLLSPDWY Trigger: GTACCAGTCAGGGCTAAGTAACTTACCATTCGTAAATAAAGTCAAAGGAGTTTCTCCCAGTGTCCCACTAAACTCCCTCCTTCCCTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR CAA 90 bp | TCCTTAACTTCCTTGGTTACCAAGAGGTTAGTAACTAAAGCACCATaGTGGGTTTGCCACTGGGAAGCCTGGCTTATGGCCATAACATTT | + |
|
Preference number: 2 (lower is better) Translates to: SLTSLVTKRLVTKAP*WVCHWEAWLMAITF Trigger: AAATGTTATGGCCATAAGCCAGGCTTCCCAGTGGCAAACCCACAATGGTGCTTTAGTTACTAACCTCTTGGTAACCAAGGAAGTTAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR CAA 90 bp | AGGGCTTATACAGCACTGTTCTGCAACAGCCAATCCTTAACTTCCTaGGTTACCAAGAGGTTAGTAACTAAAGCACCATTGTGGGTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: RAYTALFCNSQSLTS*VTKRLVTKAPLWVC Trigger: GCAAACCCACAATGGTGCTTTAGTTACTAACCTCTTGGTAACCAAGGAAGTTAAGGATTGGCTGTTGCAGAACAGTGCTGTATAAGCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR-3UTR GCA 90 bp | CAATTAGGAAACACTGCCCCGTTTTTGTTTCCTTCTCATGGTAGTTTGCTAGGCCCATCAGGAACTGAGTaGCTTGGTAAATCAGTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QLGNTAPFLFPSHGSLLGPSGTE*LGKSVA Trigger: TGCTACTGATTTACCAAGGCACTCAGTTCCTGATGG...GCCTAGCAAACTACCATGAGAAGGAAACAAAAACGGGGCAGTGTTTCCTAATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR TCA 90 bp | CTGGAAAACTGGATGTCTGCTATGGAGAAAACCTGGGTGTGTACACTTCTGTTAGGACACTGCTTTATTTaGGATTGCTTAAGAGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LENWMSAMEKTWVCTLLLGHCFI*DCLRVS Trigger: GCTCACTCTTAAGCAATCTCAAATAAAGCAGTGTCC...TAACAGAAGTGTACACACCCAGGTTTTCTCCATAGCAGACATCCAGTTTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR TCA 90 bp | CAATTAGGAAACACTGCCCCGTTTTTGTTTCCTTCTCATGGTAGTTTGCTAGGCTCTACTCAGCTGATCTaGCCTCATTCTCATAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: QLGNTAPFLFPSHGSLLGSTQLI*PHSHKT Trigger: GGTTTTATGAGAATGAGGTCAGATCAGCTGAGTAGA...GCCTAGCAAACTACCATGAGAAGGAAACAAAAACGGGGCAGTGTTTCCTAATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR GCA 90 bp | CAATTAGGAAACACTGCCCCGTTTTTGTTTCCTTCTCATGGTAGTTTGCTAGGCTTATGTGCTCTGAACTaGAAAACACACAGCAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: QLGNTAPFLFPSHGSLLGLCALN*KTHSKL Trigger: GAGCTTGCTGTGTGTTTTGCAGTTCAGAGCACATAA...GCCTAGCAAACTACCATGAGAAGGAAACAAAAACGGGGCAGTGTTTCCTAATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CAA 90 bp | ACAGCTTTCTTTATTCAGAACACCCACTTTCATCATCGGATGAATTaGAACGTGGATTTCTTCGGGAAGAGTCTCTCACACACACATGAG | + |
|
Preference number: 2 (lower is better) Translates to: TAFFIQNTHFHHRMN*NVDFFGKSLSHTHE Trigger: CTCATGTGTGTGTGAGAGACTCTTCCCGAAGAAATCCACGTTCAAATTCATCCGATGATGAAAGTGGGTGTTCTGAATAAAGAAAGCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGGGAGTTTAGTGGGACACTGGGAGAAACTCCTTTGACTTTATTTACGAATTCTCCCTGGAGAACTTaGTTTCACTGTTTACGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: RREFSGTLGETPLTLFTNSPWRT*FHCLRF Trigger: AAAACGTAAACAGTGAAATCAAGTTCTCCAGGGAGA...ATTCGTAAATAAAGTCAAAGGAGTTTCTCCCAGTGTCCCACTAAACTCCCTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATTCCAGAAAACTCAAATTCGCTTGCTGTTTAGGACAACAGAAATCTTCTCTAAGACGGCGATGACTTaGGGAGTGAAATGCCTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: EFQKTQIRLLFRTTEIFSKTAMT*GVKCLV Trigger: AACTAGGCATTTCACTCCCCAAGTCATCGCCGTCTT...AGAGAAGATTTCTGTTGTCCTAAACAGCAAGCGAATTTGAGTTTTCTGGAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR GCA 90 bp | ACAATACAGCTAAATAAGGAAACTTTCTTTTCCAAACTATTGGGTGGACACGGTACTTGGGGAGTGAAATaGCTAGTTATGACCATCAGG | + |
|
Preference number: 2 (lower is better) Translates to: TIQLNKETFFSKLLGGHGTWGVK*LVMTIR Trigger: CCTGATGGTCATAACTAGGCATTTCACTCCCCAAGT...ACCGTGTCCACCCAATAGTTTGGAAAAGAAAGTTTCCTTATTTAGCTGTATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAATACAGCTAAATAAGGAAACTTTCTTTTCCAAACTATTGGGTGGACACGGTATGGATCGCTGTGGTTaGTGTCTGTGTATATGCACT | + |
|
Preference number: 2 (lower is better) Translates to: TIQLNKETFFSKLLGGHGMDRCG*CLCICT Trigger: AGTGCATATACACAGACACCAACCACAGCGATCCAT...ACCGTGTCCACCCAATAGTTTGGAAAAGAAAGTTTCCTTATTTAGCTGTATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR CCA 90 bp | GAATTCCAGAAAACTCAAATTCGCTTGCTGTTTAGGACAACAGAAATCTTCTCTGGGTATCTGGAAAACTaGATGTCTGCTATGGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: EFQKTQIRLLFRTTEIFSGYLEN*MSAMEK Trigger: TTTCTCCATAGCAGACATCCAGTTTTCCAGATACCC...AGAGAAGATTTCTGTTGTCCTAAACAGCAAGCGAATTTGAGTTTTCTGGAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTGGCACCAGGTGGCGCCTTGAAAGCTCAGGGTaGGTCAGTCCTAAAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VPLPGLTPLSIPPGTRWRLESSG*VSPKAA Trigger: AGCTGCTTTAGGACTGACCAACCCTGAGCTTTCAAG...GCGCCACCTGGTGCCAGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR GCA 72 bp | ACAGCAAGCTCTCTACTCAAGAACTCTGGGTCCCTCTaGCCGGGCTTACTCCACTCAGCATCCCGCCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TASSLLKNSGSL*PGLLHSASRLA Trigger: TGCCAGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGACCCAGAGTTCTTGAGTAGAGAGCTTGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CCA 72 bp | CCAGAGCGAGAACTGGATGTCTGCAGTGTGTCCTGCTaGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PERELDVCSVSC*PWVPVSVSLQA Trigger: TGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAGACATCCAGTTCTCGCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTGGCACCAGGTGGCGCACACAATCCCACCCATaGGCAATATCACTTCTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VPLPGLTPLSIPPGTRWRTQSHP*AISLLR Trigger: TCTTAGAAGTGATATTGCCAATGGGTGGGATTGTGT...GCGCCACCTGGTGCCAGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAGTGTGTCCTGCTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGCCAAAGTGGCCATGCTaGAAAGCTCAGGGTTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LQCVLLALGASLCQSASKPKWPC*KAQGWS Trigger: TGACCAACCCTGAGCTTTCAAGCATGGCCACTTTGG...CTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CCA 72 bp | CGAGAACTGGATGTCTGCAGTGTGTCCTGCTGGCCCTaGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: RELDVCSVSCWP*VPVSVSLQASY Trigger: GTAGCTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAGACATCCAGTTCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR CAA 90 bp | TTACTCCACTCAGCATCCCGCCTGGCACCAGGTGGCGCTTTCCTGAGCCTGTTTACTAACAGCCAGTGCTaGGAATCCAGAGGGGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LLHSASRLAPGGAFLSLFTNSQC*ESRGEV Trigger: AACCTCCCCTCTGGATTCCAAGCACTGGCTGTTAGT...AAACAGGCTCAGGAAAGCGCCACCTGGTGCCAGGCGGGATGCTGAGTGGAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAGTGTGTCCTGCTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGCCGGTAACTGTATCTTaGGCTTCTGTAGCTCACACG | + |
|
Preference number: 3 (lower is better) Translates to: LQCVLLALGASLCQSASKPVTVS*ASVAHT Trigger: CGTGTGAGCTACAGAAGCCAAAGATACAGTTACCGG...CTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR GCA 72 bp | AAACCAGAGCGAGAACTGGATGTCTGCAGTGTGTCCTaGTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: KPERELDVCSVS*WPWVPVSVSLQ Trigger: TTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAGACATCCAGTTCTCGCTCTGGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CCA 72 bp | GGGCTTACTCCACTCAGCATCCCGCCTGGCACCAGGTaGCGCTTTCCTGAGCCTGTTTCTTCTCCCAATTAT | + |
|
Preference number: 3 (lower is better) Translates to: GLTPLSIPPGTR*RFPEPVSSPNY Trigger: ATAATTGGGAGAAGAAACAGGCTCAGGAAAGCGCCACCTGGTGCCAGGCGGGATGCTGAGTGGAGTAAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAGTGTGTCCTGCTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGATGCCTGGTATTTACTaGAAATGGCCACCTCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LQCVLLALGASLCQSASKMPGIY*KWPPPD Trigger: GTCTGGAGGTGGCCATTTCAAGTAAATACCAGGCAT...CTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CCA 72 bp | AGTGCTTGGAATCCAGAGGGGAGGTTAAGGAGATGCTaGAGCAGAGCCAGAGAGCACTGTCAGGACTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SAWNPEGRLRRC*SRAREHCQDSK Trigger: CTTGGAGTCCTGACAGTGCTCTCTGGCTCTGCTCCAGCATCTCCTTAACCTCCCCTCTGGATTCCAAGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR TCA 72 bp | ACTCAGCATCCCGCCTGGCACCAGGTGGCGCTTTCCTaGGCCTGTTTCTTCTCCCAATTATTCTACCCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: TQHPAWHQVALS*ACFFSQLFYPL Trigger: TAGAGGGTAGAATAATTGGGAGAAGAAACAGGCTCAGGAAAGCGCCACCTGGTGCCAGGCGGGATGCTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR TCA 72 bp | CGTGGATTTCTTCGGGAAGAGTCTCTCACACACACATaGGCTCTCACAAGACCTCAGTGGGGAGGGCACATG | + |
|
Preference number: 3 (lower is better) Translates to: RGFLREESLTHT*ALTRPQWGGHM Trigger: CATGTGCCCTCCCCACTGAGGTCTTGTGAGAGCTCATGTGTGTGTGAGAGACTCTTCCCGAAGAAATCCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR CCA 72 bp | TGCAAAACACACAGCAAGCTCTCTACTCAAGAACTCTaGGTCCCTCTGCCCGGGCTTACTCCACTCAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: CKTHSKLSTQEL*VPLPGLTPLSI Trigger: GATGCTGAGTGGAGTAAGCCCGGGCAGAGGGACCCAGAGTTCTTGAGTAGAGAGCTTGCTGTGTGTTTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTCAAGAACTCTGGGTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTATTCAGGAGTTAACTTaGCTAGCCTCACTGTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TQELWVPLPGLTPLSIPPIQELT*LASLSS Trigger: AGAAGACAGTGAGGCTAGCAAAGTTAACTCCTGAAT...AGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGACCCAGAGTTCTTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR GCA 72 bp | CCTGGACCTCAGTATCAGAGGAACACTAACAGCCAGTaGTTGGAATCCAGAGGGGAGGTTAAGGAGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PGPQYQRNTNSQ*LESRGEVKEML Trigger: CAGCATCTCCTTAACCTCCCCTCTGGATTCCAAGCACTGGCTGTTAGTGTTCCTCTGATACTGAGGTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CCA 72 bp | GACCTCAGTATCAGAGGAACACTAACAGCCAGTGCTTaGAATCCAGAGGGGAGGTTAAGGAGATGCTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: DLSIRGTLTASA*NPEGRLRRCWS Trigger: GCTCCAGCATCTCCTTAACCTCCCCTCTGGATTCCAAGCACTGGCTGTTAGTGTTCCTCTGATACTGAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR GCA 72 bp | TTGGCACATGGCTACACAGGTGAACCAAAGTGGCCATaGTTGAAAGCTCAGGGTTGGTCAGTCCTAAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LAHGYTGEPKWP*LKAQGWSVLKQ Trigger: CTGCTTTAGGACTGACCAACCCTGAGCTTTCAAGCATGGCCACTTTGGTTCACCTGTGTAGCCATGTGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CCA 72 bp | CTGAACTTGGCACATGGCTACACAGGTGAACCAAAGTaGCCATGCTTGAAAGCTCAGGGTTGGTCAGTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LNLAHGYTGEPK*PCLKAQGWSVL Trigger: TAGGACTGACCAACCCTGAGCTTTCAAGCATGGCCACTTTGGTTCACCTGTGTAGCCATGTGCCAAGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CCA 72 bp | AGCAAGCAGAGGCGGTACAAACTAGTCACCTCCAAATaGATCGCTGTGGTTGGTGTCTGTGTATATGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: SKQRRYKLVTSK*IAVVGVCVYAL Trigger: CAGTGCATATACACAGACACCAACCACAGCGATCCATTTGGAGGTGACTAGTTTGTACCGCCTCTGCTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CCA 72 bp | GAGATAGAGTTACCAGCTGGGGCACAGCAAGATGCCTaGTATTTACTTGAAATGGCCACCTCCAGACTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: EIELPAGAQQDA*YLLEMATSRLV Trigger: TACCAGTCTGGAGGTGGCCATTTCAAGTAAATACCAGGCATCTTGCTGTGCCCCAGCTGGTAACTCTATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CCA 72 bp | CTAAGCTGGCAGAGAGTTGAAAAGACGGCGATGACTTaGGGAGTGAAATGCCTAGTTATGACCATCAGGACG | + |
|
Preference number: 3 (lower is better) Translates to: LSWQRVEKTAMT*GVKCLVMTIRT Trigger: CGTCCTGATGGTCATAACTAGGCATTTCACTCCCCAAGTCATCGCCGTCTTTTCAACTCTCTGCCAGCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGACACTGGTTCAGGGTAAGCCTAACGTAATTTTGCCAACTTTCTTCTTAGCTAGCACCATTGTGGGTTaGCCACTGGGAAGCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QTLVQGKPNVILPTFFLASTIVG*PLGSLA Trigger: AGCCAGGCTTCCCAGTGGCAAACCCACAATGGTGCT...AGCTAAGAAGAAAGTTGGCAAAATTACGTTAGGCTTACCCTGAACCAGTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR TCA 72 bp | TTGACAACTTCTGAACTTGGCACATGGCTACACAGGTaGACCAAAGTGGCCATGCTTGAAAGCTCAGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LTTSELGTWLHR*TKVAMLESSGL Trigger: CAACCCTGAGCTTTCAAGCATGGCCACTTTGGTTCACCTGTGTAGCCATGTGCCAAGTTCAGAAGTTGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR GCA 72 bp | TTCAAAGGAAGGGAGACAGCTCCATCAGGAACTGAGTaGCTTGGTAAATCAGTAGCAATCAGTAGCCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: FKGRETAPSGTE*LGKSVAISSHG Trigger: CCCATGGCTACTGATTGCTACTGATTTACCAAGGCACTCAGTTCCTGATGGAGCTGTCTCCCTTCCTTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR GCA 72 bp | TTGCCGATTTCCAGTTGGTCTTCACAAGACCTGGAGTaGAGTGTCCTCAAGGGGCAAAGGTACTCGTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LPISSWSSQDLE*SVLKGQRYSFK Trigger: TTTAAACGAGTACCTTTGCCCCTTGAGGACACTGCACTCCAGGTCTTGTGAAGACCAACTGGAAATCGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR GCA 72 bp | GGTACTTGGAGACCCTCTCCATACTTTCTTCCACCTTaGATTGCAGGAAGATATCAGTACCTTGCAGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GTWRPSPYFLPP*IAGRYQYLAAG Trigger: ACCAGCTGCAAGGTACTGATATCTTCCTGCAATGCAAGGTGGAAGAAAGTATGGAGAGGGTCTCCAAGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR CCA 72 bp | CTGGGGCACAGCAAGATGCCTGGTATTTACTTGAAATaGCCACCTCCAGACTGGTACATAACAAACATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LGHSKMPGIYLK*PPPDWYITNIS Trigger: GCTGATGTTTGTTATGTACCAGTCTGGAGGTGGCCATTTCAAGTAAATACCAGGCATCTTGCTGTGCCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR CAA 90 bp | TATAAACATTTTGGAGATCCCCTAAAGTCTGCTGTGCTGGGACAGTCTCTGTGCAAATATGCCACACATTaGGAGGCAAAGGCAGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: YKHFGDPLKSAVLGQSLCKYATH*EAKAGV Trigger: GACTCCTGCCTTTGCCTCCAAATGTGTGGCATATTT...GCACAGAGACTGTCCCAGCACAGCAGACTTTAGGGGATCTCCAAAATGTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR CCA 72 bp | CCCAGGAGACCCGTGAAAAGCTATAGCCTATTTGCTTaGCAGTATGGTCTGAAATTCTTCTGGCTTTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: PRRPVKSYSLFA*QYGLKFFWLWT Trigger: AGTCCAAAGCCAGAAGAATTTCAGACCATACTGCCAAGCAAATAGGCTATAGCTTTTCACGGGTCTCCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CCA 72 bp | TTGGTTACCAAGAGGTTAGTAACTAAAGCACCATTGTaGGTTTGCCACTGGGAAGCCTGGCTTATGGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: LVTKRLVTKAPL*VCHWEAWLMAI Trigger: TATGGCCATAAGCCAGGCTTCCCAGTGGCAAACCCACAATGGTGCTTTAGTTACTAACCTCTTGGTAACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR TCA 72 bp | GTACTTACAAGTGAGGGGACAACTTTCCTCTCAAATTaGCACTTCAAAGGAAGGGAGACAGCTCCATCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VLTSEGTTFLSN*HFKGRETAPSG Trigger: TCCTGATGGAGCTGTCTCCCTTCCTTTGAAGTGTCAATTTGAGAGGAAAGTTGTCCCCTCACTTGTAAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR TCA 72 bp | ACTATAGCTTCTAACTCTCCAATAAAGTACGTTTCCTaGTGGGCCACTGCCCCAGGCTTCACAGCTTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TIASNSPIKYVS*WATAPGFTAFF Trigger: AAAGAAAGCTGTGAAGCCTGGGGCAGTGGCCCATCAGGAAACGTACTTTATTGGAGAGTTAGAAGCTATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR GCA 72 bp | GGTGTGAGATTACACAGGGCTTATACAGCACTGTTCTaGAACAGCCAATCCTTAACTTCCTTGGTTACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GVRLHRAYTALF*NSQSLTSLVTK Trigger: CTTGGTAACCAAGGAAGTTAAGGATTGGCTGTTGCAGAACAGTGCTGTATAAGCCCTGTGTAATCTCACACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR GCA 72 bp | TTGGAGACCCTCTCCATACTTTCTTCCACCTTGCATTaGAGGAAGATATCAGTACCTTGCAGCTGGTATCAA | + |
|
Preference number: 3 (lower is better) Translates to: LETLSILSSTLH*RKISVPCSWYQ Trigger: TTGATACCAGCTGCAAGGTACTGATATCTTCCTGCAATGCAAGGTGGAAGAAAGTATGGAGAGGGTCTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR TCA 72 bp | GGAGGGAGTTTAGTGGGACACTGGGAGAAACTCCTTTaGCTTTATTTACGAATGGTAAGTTACTTAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GGSLVGHWEKLL*LYLRMVSYLAL Trigger: CAGGGCTAAGTAACTTACCATTCGTAAATAAAGTCAAAGGAGTTTCTCCCAGTGTCCCACTAAACTCCCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR GCA 72 bp | AATCCTACCTCCCACATATTTTCGGTATGGTTAAGTTaGCGATTTCCAGTTGGTCTTCACAAGACCTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: NPTSHIFSVWLS*RFPVGLHKTWS Trigger: ACTCCAGGTCTTGTGAAGACCAACTGGAAATCGGCAACTTAACCATACCGAAAATATGTGGGAGGTAGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CCA 72 bp | ACTAAAGCACCATTGTGGGTTTGCCACTGGGAAGCCTaGCTTATGGCCATAACATTTACTATAGCTTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: TKAPLWVCHWEA*LMAITFTIASN Trigger: GTTAGAAGCTATAGTAAATGTTATGGCCATAAGCCAGGCTTCCCAGTGGCAAACCCACAATGGTGCTTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR-3UTR CAA 90 bp | TATAAACATTTTGGAGATCCCCTAAAGTCTGCTGTGCTGGGACAGTCTCTGTGCCAATCCTTAACTTCCTaGGTTACCAAGAGGTTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: YKHFGDPLKSAVLGQSLCQSLTS*VTKRLV Trigger: TACTAACCTCTTGGTAACCAAGGAAGTTAAGGATTG...GCACAGAGACTGTCCCAGCACAGCAGACTTTAGGGGATCTCCAAAATGTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR TCA 72 bp | TGGGGCGGAGAGCGGCTCCTTGATTCACACAGAAATTaGCATTTGGTTATAGGAATACAGGGTAAATCTATA | + |
|
Preference number: 3 (lower is better) Translates to: WGGERLLDSHRN*HLVIGIQGKSI Trigger: TATAGATTTACCCTGTATTCCTATAACCAAATGTCAATTTCTGTGTGAATCAAGGAGCCGCTCTCCGCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR GCA 72 bp | AGAAATCTTCTCTGGGTATCTGGAAAACTGGATGTCTaGTATGGAGAAAACCTGGGTGTGTACACTTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: RNLLWVSGKLDV*YGENLGVYTSV Trigger: AACAGAAGTGTACACACCCAGGTTTTCTCCATAGCAGACATCCAGTTTTCCAGATACCCAGAGAAGATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CCA 72 bp | TCTTCTCTGGGTATCTGGAAAACTGGATGTCTGCTATaGAGAAAACCTGGGTGTGTACACTTCTGTTATACA | + |
|
Preference number: 3 (lower is better) Translates to: SSLGIWKTGCLL*RKPGCVHFCYT Trigger: TGTATAACAGAAGTGTACACACCCAGGTTTTCTCCATAGCAGACATCCAGTTTTCCAGATACCCAGAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CCA 72 bp | AGGTTAGTAACTAAAGCACCATTGTGGGTTTGCCACTaGGAAGCCTGGCTTATGGCCATAACATTTACTATA | + |
|
Preference number: 3 (lower is better) Translates to: RLVTKAPLWVCH*EAWLMAITFTI Trigger: TATAGTAAATGTTATGGCCATAAGCCAGGCTTCCCAGTGGCAAACCCACAATGGTGCTTTAGTTACTAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR TCA 72 bp | CAACGCAATCACAAGTTAATAGCTATTGACAACTTCTaGACTTGGCACATGGCTACACAGGTGAACCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: QRNHKLIAIDNF*TWHMATQVNQS Trigger: ACTTTGGTTCACCTGTGTAGCCATGTGCCAAGTTCAGAAGTTGTCAATAGCTATTAACTTGTGATTGCGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR TCA 72 bp | CTTCCTTGTTCAACGCAATCACAAGTTAATAGCTATTaGCAACTTCTGAACTTGGCACATGGCTACACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LPCSTQSQVNSY*QLLNLAHGYTG Trigger: ACCTGTGTAGCCATGTGCCAAGTTCAGAAGTTGTCAATAGCTATTAACTTGTGATTGCGTTGAACAAGGAAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR GCA 72 bp | CACACGATCCAGTTGACATATAATTTCCCATTTATGTaGTCTGAACTGCAAAACACACAGCAAGCTCTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: HTIQLTYNFPFM*SELQNTQQALY Trigger: GTAGAGAGCTTGCTGTGTGTTTTGCAGTTCAGAGCACATAAATGGGAAATTATATGTCAACTGGATCGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CCA 72 bp | AAGAAAACCAATCCTACCTCCCACATATTTTCGGTATaGTTAAGTTGCCGATTTCCAGTTGGTCTTCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: KKTNPTSHIFSV*LSCRFPVGLHK Trigger: CTTGTGAAGACCAACTGGAAATCGGCAACTTAACCATACCGAAAATATGTGGGAGGTAGGATTGGTTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGACACTGGTTCAGGGTAAGCCTAACGTAATTTTGCCAACTTTCTTCTTAGCTTTCTCCCTGGAGAACTaGATTTCACTGTTTACGTTT | + |
|
Preference number: 3 (lower is better) Translates to: QTLVQGKPNVILPTFFLAFSLEN*ISLFTF Trigger: AAACGTAAACAGTGAAATCAAGTTCTCCAGGGAGAA...AGCTAAGAAGAAAGTTGGCAAAATTACGTTAGGCTTACCCTGAACCAGTGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATTCCAGAAAACTCAAATTCGCTTGCTGTTTAGGACAACAGAAATCTTCTCTAACTTTCCTCTCAAATaGACACTTCAAAGGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: EFQKTQIRLLFRTTEIFSNFPLK*TLQRKG Trigger: TCCCTTCCTTTGAAGTGTCAATTTGAGAGGAAAGTT...AGAGAAGATTTCTGTTGTCCTAAACAGCAAGCGAATTTGAGTTTTCTGGAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR-3UTR CAA 90 bp | GAATTCCAGAAAACTCAAATTCGCTTGCTGTTTAGGACAACAGAAATCTTCTCTGCTCACACGATCCAGTaGACATATAATTTCCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: EFQKTQIRLLFRTTEIFSAHTIQ*TYNFPF Trigger: AAATGGGAAATTATATGTCAACTGGATCGTGTGAGC...AGAGAAGATTTCTGTTGTCCTAAACAGCAAGCGAATTTGAGTTTTCTGGAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR GCA 72 bp | CTTAGATTCTTGAATTCCAGAAAACTCAAATTCGCTTaGTGTTTAGGACAACAGAAATCTTCTCTGGGTATC | + |
|
Preference number: 3 (lower is better) Translates to: LRFLNSRKLKFA*CLGQQKSSLGI Trigger: GATACCCAGAGAAGATTTCTGTTGTCCTAAACAGCAAGCGAATTTGAGTTTTCTGGAATTCAAGAATCTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR TCA 72 bp | CACTGTTTTTACACAGAAACTTACTCAATATACCTATaGACCACATCTACAGGTTTCTCTGCAAAGATTCGA | + |
|
Preference number: 3 (lower is better) Translates to: HCFYTETYSIYL*TTSTGFSAKIR Trigger: TCGAATCTTTGCAGAGAAACCTGTAGATGTGGTTCATAGGTATATTGAGTAAGTTTCTGTGTAAAAACAGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR CCA 90 bp | GTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTGGCACCAGGTGGCGCCCAGCGTTCCTTTCTTaGGTGCAGCGCTTCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: VPLPGLTPLSIPPGTRWRPAFLS*VQRFHI Trigger: GATGTGGAAGCGCTGCACCCAAGAAAGGAACGCTGG...GCGCCACCTGGTGCCAGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR TCA 90 bp | GTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTGGCACCAGGTGGCGCGGTAATTGTTGTCTATaGGTGGCCAGGCCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPLPGLTPLSIPPGTRWRGNCCL*VARPLP Trigger: TGGAAGGGGCCTGGCCACTCATAGACAACAATTACC...GCGCCACCTGGTGCCAGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR TCA 90 bp | ACTCAAGAACTCTGGGTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTTGCACTGAGGTGGTGTaGGGCAGGCTGTGCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQELWVPLPGLTPLSIPPCTEVV*GRLCPR Trigger: CCTGGGGCACAGCCTGCCTCACACCACCTCAGTGCA...AGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGACCCAGAGTTCTTGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR CCA 90 bp | GTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTGGCACCAGGTGGCGCGGGTCACTTCCGGATTaGTGGAAGATGTGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPLPGLTPLSIPPGTRWRGSLPD*WKMWVH Trigger: ATGGACCCACATCTTCCACCAATCCGGAAGTGACCC...GCGCCACCTGGTGCCAGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR TCA 90 bp | CTGCAGTGTGTCCTGCTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGTGGCATCACCAGTGGTaGGCAGGTCGAAGACACACG | + |
|
Preference number: 4 (lower is better) Translates to: LQCVLLALGASLCQSASKWHHQW*AGRRHT Trigger: CGTGTGTCTTCGACCTGCTCACCACTGGTGATGCCA...CTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCAGGCCGTACTCCTGGACCTCAGTATCAGAGGAACACTAACAGCCAGTCTCCCCCATGTTCTCTaGCTCCCCCGTGGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLQAVLLDLSIRGTLTASLPHVL*LPRGCG Trigger: ACCACAGCCACGGGGGAGTCAGAGAACATGGGGGAG...ACTGGCTGTTAGTGTTCCTCTGATACTGAGGTCCAGGAGTACGGCCTGAAGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR GCA 90 bp | ACTCAAGAACTCTGGGTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTAGCATAGGCGCGAAGTaGCTTGCAAAACTCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TQELWVPLPGLTPLSIPPSIGAK*LAKLRV Trigger: GACTCTGAGTTTTGCAAGGCACTTCGCGCCTATGCT...AGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGACCCAGAGTTCTTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR GCA 90 bp | TCTAACTGTGGCGTTCGTGGCTGGGGAAGACAGGGAAGGAGGGAGTTTAGTGGGTTGAAGTTCGCTGGGTaGAGCCAGCATAGGCGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNCGVRGWGRQGRREFSGLKFAG*SQHRRE Trigger: TTCGCGCCTATGCTGGCTGCACCCAGCGAACTTCAA...CCCACTAAACTCCCTCCTTCCCTGTCTTCCCCAGCCACGAACGCCACAGTTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCTCACAAGACCTCAGTGGGGAGGGCACATGTTTTTCTCATTAAACAGGCCGGAGCAGCCCAAGGCTaGGCAGCAGCAGCAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: SSHKTSVGRAHVFLIKQAGAAQG*AAAAAT Trigger: TGTTGCTGCTGCTGCTGCTCAGCCTTGGGCTGCTCC...GGCCTGTTTAATGAGAAAAACATGTGCCCTCCCCACTGAGGTCTTGTGAGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR TCA 90 bp | ACTCAAGAACTCTGGGTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTTTCTGGATTCGGCATTaGGTAGGCTGTTGGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: TQELWVPLPGLTPLSIPPFWIRH*VGCWQS Trigger: TGATTGCCAACAGCCTACTCAATGCCGAATCCAGAA...AGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGACCCAGAGTTCTTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR TCA 90 bp | TCTCACACACACATGAGCTCTCACAAGACCTCAGTGGGGAGGGCACATGTTTTTCTCCCCCATGTTCTCTaGCTCCCCCGTGGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SHTHMSSHKTSVGRAHVFLPHVL*LPRGCG Trigger: ACCACAGCCACGGGGGAGTCAGAGAACATGGGGGAG...AAAAACATGTGCCCTCCCCACTGAGGTCTTGTGAGAGCTCATGTGTGTGTGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR CCA 90 bp | CTGCAGTGTGTCCTGCTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGGATTGGTGGAAGATGTaGGTCCATCCTTGGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQCVLLALGASLCQSASKDWWKM*VHPWNS Trigger: ACTGTTCCAAGGATGGACCCACATCTTCCACCAATC...CTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR CCA 90 bp | CTGCAGTGTGTCCTGCTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGAGGATAGCAGACACCTaGCCTTGTCCATCATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LQCVLLALGASLCQSASKRIADT*PCPSSM Trigger: CATTGATGATGGACAAGGCCAGGTGTCTGCTATCCT...CTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR GCA 90 bp | CCTGATGGGCCACTGCCCCAGGCTTCACAGCTTTCTTTATTCAGAACACCCACTCTTGTTTGTAGCAGTTaGACTGGACCCGGGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PDGPLPQASQLSLFRTPTLVCSS*TGPGDH Trigger: GTGGTCCCCGGGTCCAGTGCAACTGCTACAAACAAG...AGTGGGTGTTCTGAATAAAGAAAGCTGTGAAGCCTGGGGCAGTGGCCCATCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCAGGCCGTACTCCTGGACCTCAGTATCAGAGGAACACTAACAGCCAGTCGTGGCATTGGGTGCTaGCAGTCTCCAGTGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLQAVLLDLSIRGTLTASRGIGC*QSPVCS Trigger: GCTACACACTGGAGACTGCCAGCACCCAATGCCACG...ACTGGCTGTTAGTGTTCCTCTGATACTGAGGTCCAGGAGTACGGCCTGAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR GCA 90 bp | CTTCTTCAGGCCGTACTCCTGGACCTCAGTATCAGAGGAACACTAACAGCCAGTCTTGTTTGTAGCAGTTaGACTGGACCCGGGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLQAVLLDLSIRGTLTASLVCSS*TGPGDH Trigger: GTGGTCCCCGGGTCCAGTGCAACTGCTACAAACAAG...ACTGGCTGTTAGTGTTCCTCTGATACTGAGGTCCAGGAGTACGGCCTGAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGCACAGCAAGATGCCTGGTATTTACTTGAAATGGCCACCTCCAGACTGGTCGCACAAACACTGTaGTGCCTATGTAGCGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGAQQDAWYLLEMATSRLVAQTL*CLCSGH Trigger: ATGCCCGCTACATAGGCACCACAGTGTTTGTGCGAC...CAGTCTGGAGGTGGCCATTTCAAGTAAATACCAGGCATCTTGCTGTGCCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGCACAGCAAGATGCCTGGTATTTACTTGAAATGGCCACCTCCAGACTGATCTTCTCGTGGCATTaGGTGCTGGCAGTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGAQQDAWYLLEMATSRLIFSWH*VLAVSS Trigger: ACTGGAGACTGCCAGCACCCAATGCCACGAGAAGAT...CAGTCTGGAGGTGGCCATTTCAAGTAAATACCAGGCATCTTGCTGTGCCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CAA 72 bp | CATCTTCACAAAAGACTCCCCGTTTCCTGCCAGCCTTaGTCTGTCAGTCCCACTGGCCAACAGGACATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLHKRLPVSCQP*SVSPTGQQDMS Trigger: TGACATGTCCTGTTGGCCAGTGGGACTGACAGACAAAGGCTGGCAGGAAACGGGGAGTCTTTTGTGAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR TCA 90 bp | CAATTAGGAAACACTGCCCCGTTTTTGTTTCCTTCTCATGGTAGTTTGCTAGGCGGAGCAGCCCAAGGCTaGGCAGCAGCAGCAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: QLGNTAPFLFPSHGSLLGGAAQG*AAAAAT Trigger: TGTTGCTGCTGCTGCTGCTCAGCCTTGGGCTGCTCC...GCCTAGCAAACTACCATGAGAAGGAAACAAAAACGGGGCAGTGTTTCCTAATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR GCA 90 bp | TATAAACATTTTGGAGATCCCCTAAAGTCTGCTGTGCTGGGACAGTCTCTGTGCGGCAGAGTTCAGGTGTaGAGTCAGGGCCACGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YKHFGDPLKSAVLGQSLCGRVQV*SQGHEV Trigger: GACTTCGTGGCCCTGACTGCACACCTGAACTCTGCC...GCACAGAGACTGTCCCAGCACAGCAGACTTTAGGGGATCTCCAAAATGTTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR CCA 90 bp | GACAACTTTCCTCTCAAATTGACACTTCAAAGGAAGGGAGACAGCTCCATCAGGATCCCCCACAGCTGCTaGGGAAGATGTGCCAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: DNFPLKLTLQRKGDSSIRIPHSC*GRCASV Trigger: AACGCTGGCACATCTTCCCCAGCAGCTGTGGGGGAT...CCTGATGGAGCTGTCTCCCTTCCTTTGAAGTGTCAATTTGAGAGGAAAGTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR GCA 90 bp | CTGGAAAACTGGATGTCTGCTATGGAGAAAACCTGGGTGTGTACACTTCTGTTAGGCAGAGTTCAGGTGTaGAGTCAGGGCCACGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LENWMSAMEKTWVCTLLLGRVQV*SQGHEV Trigger: GACTTCGTGGCCCTGACTGCACACCTGAACTCTGCC...TAACAGAAGTGTACACACCCAGGTTTTCTCCATAGCAGACATCCAGTTTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR GCA 90 bp | GACAACTTTCCTCTCAAATTGACACTTCAAAGGAAGGGAGACAGCTCCATCAGGTTGAAGTTCGCTGGGTaGAGCCAGCATAGGCGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: DNFPLKLTLQRKGDSSIRLKFAG*SQHRRE Trigger: TTCGCGCCTATGCTGGCTGCACCCAGCGAACTTCAA...CCTGATGGAGCTGTCTCCCTTCCTTTGAAGTGTCAATTTGAGAGGAAAGTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR CCA 90 bp | AGCTCTCACAAGACCTCAGTGGGGAGGGCACATGTTTTTCTCATTAAACAGGCCTCACTTCCGGATTGGTaGAAGATGTGGGTCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSHKTSVGRAHVFLIKQASLPDW*KMWVHP Trigger: AGGATGGACCCACATCTTCCACCAATCCGGAAGTGA...GGCCTGTTTAATGAGAAAAACATGTGCCCTCCCCACTGAGGTCTTGTGAGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| 3UTR CAA 72 bp | TCCTTGGTTACCAAGAGGTTAGTAACTAAAGCACCATaGTGGGTTTGCCACTGGGAAGCCTGGCTTATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLVTKRLVTKAP*WVCHWEAWLMA Trigger: GGCCATAAGCCAGGCTTCCCAGTGGCAAACCCACAATGGTGCTTTAGTTACTAACCTCTTGGTAACCAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCTCACAAGACCTCAGTGGGGAGGGCACATGTTTTTCTCATTAAACAGGCCTTCTGGATTCGGCATTaGGTAGGCTGTTGGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: SSHKTSVGRAHVFLIKQAFWIRH*VGCWQS Trigger: TGATTGCCAACAGCCTACTCAATGCCGAATCCAGAA...GGCCTGTTTAATGAGAAAAACATGTGCCCTCCCCACTGAGGTCTTGTGAGAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR TCA 90 bp | GAATTCCAGAAAACTCAAATTCGCTTGCTGTTTAGGACAACAGAAATCTTCTCTGCCTCGGCAGGCCTTTaGAGTTCGCTGGGTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EFQKTQIRLLFRTTEIFSASAGL*SSLGAA Trigger: GGCTGCACCCAGCGAACTTCAAAGGCCTGCCGAGGC...AGAGAAGATTTCTGTTGTCCTAAACAGCAAGCGAATTTGAGTTTTCTGGAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR GCA 90 bp | CTGGAAAACTGGATGTCTGCTATGGAGAAAACCTGGGTGTGTACACTTCTGTTACGTTCCTTTCTTGGGTaGAGCGCTTCCACATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LENWMSAMEKTWVCTLLLRSFLG*SASTSS Trigger: GGAGGATGTGGAAGCGCTGCACCCAAGAAAGGAACG...TAACAGAAGTGTACACACCCAGGTTTTCTCCATAGCAGACATCCAGTTTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR GCA 90 bp | CCTCTAGATCAACACACAATCCCACCCATTGGCAATATCACTTCTAAGAAACACTACATCCCCCACAGCTaGTGGGGAAGATGTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLDQHTIPPIGNITSKKHYIPHS*WGRCAS Trigger: GCTGGCACATCTTCCCCAGCAGCTGTGGGGGATGTA...GTGTTTCTTAGAAGTGATATTGCCAATGGGTGGGATTGTGTGTTGATCTAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CAA 72 bp | TACCAGCTGGGGCACAGCAAGATGCCTGGTATTTACTaGAAATGGCCACCTCCAGACTGGTACATAACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: YQLGHSKMPGIY*KWPPPDWYITN Trigger: GTTTGTTATGTACCAGTCTGGAGGTGGCCATTTCAAGTAAATACCAGGCATCTTGCTGTGCCCCAGCTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR GCA 90 bp | CCTCTAGATCAACACACAATCCCACCCATTGGCAATATCACTTCTAAGAAACACCTGCTGGGGAAGATGTaGCAGCGTTCCTTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLDQHTIPPIGNITSKKHLLGKM*QRSFLG Trigger: CCCAAGAAAGGAACGCTGGCACATCTTCCCCAGCAG...GTGTTTCTTAGAAGTGATATTGCCAATGGGTGGGATTGTGTGTTGATCTAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR GCA 90 bp | CTTAAAAATATGCCACACATTTGGAGGCAAAGGCAGGAGTCAAATGAACAGCCAGGGGGCGGGGGAAGATaGATACTCGCCTTGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LKNMPHIWRQRQESNEQPGGGGR*ILALFV Trigger: TACAAACAAGGCGAGTATGCATCTTCCCCCGCCCCC...TGGCTGTTCATTTGACTCCTGCCTTTGCCTCCAAATGTGTGGCATATTTTTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR CCA 90 bp | AAGTATAAACATTTTGGAGATCCCCTAAAGTCTGCTGTGCTGGGACAGTCTCTGGGGCCACGAAGTCTGTaGTACATTTCTGGATTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KYKHFGDPLKSAVLGQSLGPRSL*YISGFG Trigger: GCCGAATCCAGAAATGTACCACAGACTTCGTGGCCC...CAGAGACTGTCCCAGCACAGCAGACTTTAGGGGATCTCCAAAATGTTTATACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAAAACTGGATGTCTGCTATGGAGAAAACCTGGGTGTGTACACTTCTGTTACCTAACACAGCAGAATaGTACACCAGGTTGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LENWMSAMEKTWVCTLLLPNTAE*YTRLPR Trigger: CCGAGGCAACCTGGTGTACCATTCTGCTGTGTTAGG...TAACAGAAGTGTACACACCCAGGTTTTCTCCATAGCAGACATCCAGTTTTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR CCA 90 bp | CACCCACTTTCATCATCGGATGAATTTGAACGTGGATTTCTTCGGGAAGAGTCTCCTAACACAGCAGAATaGTACACCAGGTTGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HPLSSSDEFERGFLREESPNTAE*YTRLPR Trigger: CCGAGGCAACCTGGTGTACCATTCTGCTGTGTTAGG...AGACTCTTCCCGAAGAAATCCACGTTCAAATTCATCCGATGATGAAAGTGGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR CCA 90 bp | AAACATTTTGGAGATCCCCTAAAGTCTGCTGTGCTGGGACAGTCTCTGTGCTCAGATTGGTGGAAGATGTaGGTCCATCCTTGGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KHFGDPLKSAVLGQSLCSDWWKM*VHPWNS Trigger: ACTGTTCCAAGGATGGACCCACATCTTCCACCAATC...TGAGCACAGAGACTGTCCCAGCACAGCAGACTTTAGGGGATCTCCAAAATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR CCA 90 bp | GACAACTTTCCTCTCAAATTGACACTTCAAAGGAAGGGAGACAGCTCCATCAGGCACAGAAAAGGTAATTaGGAGGTCTCTGGTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DNFPLKLTLQRKGDSSIRHRKGN*EVSGPL Trigger: GAGGGGACCAGAGACCTCCCAATTACCTTTTCTGTG...CCTGATGGAGCTGTCTCCCTTCCTTTGAAGTGTCAATTTGAGAGGAAAGTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR CCA 90 bp | CAATTAGGAAACACTGCCCCGTTTTTGTTTCCTTCTCATGGTAGTTTGCTAGGCTCCTCCAAGGCACTGTaGGCTGCAGCAGTAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QLGNTAPFLFPSHGSLLGSSKAL*AAAVKL Trigger: CAACTTTACTGCTGCAGCCCACAGTGCCTTGGAGGA...GCCTAGCAAACTACCATGAGAAGGAAACAAAAACGGGGCAGTGTTTCCTAATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR TCA 90 bp | AACGTGGATTTCTTCGGGAAGAGTCTCTCACACACACATGAGCTCTCACAAGACTTGCATGTCTGGAAGTaGTCCTTGAAAGTTCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NVDFFGKSLSHTHELSQDLHVWK*SLKVRR Trigger: CCTTCGAACTTTCAAGGATCACTTCCAGACATGCAA...GTCTTGTGAGAGCTCATGTGTGTGTGAGAGACTCTTCCCGAAGAAATCCACGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR TCA 90 bp | CAGACACTGGTTCAGGGTAAGCCTAACGTAATTTTGCCAACTTTCTTCTTAGCTGGTAATTGTTGTCTATaGGTGGCCAGGCCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTLVQGKPNVILPTFFLAGNCCL*VARPLP Trigger: TGGAAGGGGCCTGGCCACTCATAGACAACAATTACC...AGCTAAGAAGAAAGTTGGCAAAATTACGTTAGGCTTACCCTGAACCAGTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR GCA 90 bp | CAATTAGGAAACACTGCCCCGTTTTTGTTTCCTTCTCATGGTAGTTTGCTAGGCAGGCGCGAAGTGCCTTaGAAAACTCAGAGTCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: QLGNTAPFLFPSHGSLLGRREVP*KTQSQT Trigger: GGTTTGACTCTGAGTTTTGCAAGGCACTTCGCGCCT...GCCTAGCAAACTACCATGAGAAGGAAACAAAAACGGGGCAGTGTTTCCTAATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR CCA 90 bp | CAATTAGGAAACACTGCCCCGTTTTTGTTTCCTTCTCATGGTAGTTTGCTAGGCATGTGGGTCCATCCTTaGAACAGTTCCTCTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLGNTAPFLFPSHGSLLGMWVHP*NSSSGS Trigger: TGAGCCAGAGGAACTGTTCCAAGGATGGACCCACAT...GCCTAGCAAACTACCATGAGAAGGAAACAAAAACGGGGCAGTGTTTCCTAATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR CCA 90 bp | CAATTAGGAAACACTGCCCCGTTTTTGTTTCCTTCTCATGGTAGTTTGCTAGGCTTTCCTCATAGGACATaGCCAAGTCTTCGGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: QLGNTAPFLFPSHGSLLGFPHRT*PSLRAS Trigger: GGATGCCCGAAGACTTGGCCATGTCCTATGAGGAAA...GCCTAGCAAACTACCATGAGAAGGAAACAAAAACGGGGCAGTGTTTCCTAATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CAA 72 bp | AAGACAGATCTTAGGACCAGTCGGACACTGCTTTATTaGAGATTGCTTAAGAGTGAGCTAGGGGAGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTDLRTSRTLLY*RLLKSELGEQA Trigger: TGCCTGCTCCCCTAGCTCACTCTTAAGCAATCTCAAATAAAGCAGTGTCCGACTGGTCCTAAGATCTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGCCTGGCTTATGGCCATAACATTTACTATAGCTTCTAACTCTCCAATAGGGTCACTTCCGGATTaGTGGAAGATGTGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WEAWLMAITFTIASNSPIGSLPD*WKMWVH Trigger: ATGGACCCACATCTTCCACCAATCCGGAAGTGACCC...TATTGGAGAGTTAGAAGCTATAGTAAATGTTATGGCCATAAGCCAGGCTTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR CCA 90 bp | ACAATACAGCTAAATAAGGAAACTTTCTTTTCCAAACTATTGGGTGGACACGGTACCGGCATCTTCTCGTaGCATTGGGTGCTGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TIQLNKETFFSKLLGGHGTGIFS*HWVLAV Trigger: GACTGCCAGCACCCAATGCCACGAGAAGATGCCGGT...ACCGTGTCCACCCAATAGTTTGGAAAAGAAAGTTTCCTTATTTAGCTGTATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CAA 72 bp | CAATCCTACCTCCCACATATTTTCGGTATGGTTAAGTaGCCGATTTCCAGTTGGTCTTCACAAGACCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSYLPHIFGMVK*PISSWSSQDLE Trigger: CTCCAGGTCTTGTGAAGACCAACTGGAAATCGGCAACTTAACCATACCGAAAATATGTGGGAGGTAGGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGCCTGGCTTATGGCCATAACATTTACTATAGCTTCTAACTCTCCAATAAGGCGCGAAGTGCCTTaGAAAACTCAGAGTCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: WEAWLMAITFTIASNSPIRREVP*KTQSQT Trigger: GGTTTGACTCTGAGTTTTGCAAGGCACTTCGCGCCT...TATTGGAGAGTTAGAAGCTATAGTAAATGTTATGGCCATAAGCCAGGCTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR GCA 90 bp | GAATTCCAGAAAACTCAAATTCGCTTGCTGTTTAGGACAACAGAAATCTTCTCTTCTCGTGGCATTGGGTaGTGGCAGTCTCCAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EFQKTQIRLLFRTTEIFSSRGIG*WQSPVC Trigger: ACACACTGGAGACTGCCAGCACCCAATGCCACGAGA...AGAGAAGATTTCTGTTGTCCTAAACAGCAAGCGAATTTGAGTTTTCTGGAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGCCTGGCTTATGGCCATAACATTTACTATAGCTTCTAACTCTCCAATACACAGAAAAGGTAATTaGGAGGTCTCTGGTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WEAWLMAITFTIASNSPIHRKGN*EVSGPL Trigger: GAGGGGACCAGAGACCTCCCAATTACCTTTTCTGTG...TATTGGAGAGTTAGAAGCTATAGTAAATGTTATGGCCATAAGCCAGGCTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGAGTTTAGTGGGACACTGGGAGAAACTCCTTTGACTTTATTTACGAATATTGTTGTCTATGAGTaGCCAGGCCCCTTCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: RREFSGTLGETPLTLFTNIVVYE*PGPFHF Trigger: AAAGTGGAAGGGGCCTGGCCACTCATAGACAACAAT...ATTCGTAAATAAAGTCAAAGGAGTTTCTCCCAGTGTCCCACTAAACTCCCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR GCA 90 bp | GAATTCCAGAAAACTCAAATTCGCTTGCTGTTTAGGACAACAGAAATCTTCTCTGCACAAACACTGTGGTaGCTATGTAGCGGGCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: EFQKTQIRLLFRTTEIFSAQTLW*LCSGHA Trigger: TGCATGCCCGCTACATAGGCACCACAGTGTTTGTGC...AGAGAAGATTTCTGTTGTCCTAAACAGCAAGCGAATTTGAGTTTTCTGGAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR CCA 90 bp | ACAATACAGCTAAATAAGGAAACTTTCTTTTCCAAACTATTGGGTGGACACGGTGGGCCACGAAGTCTGTaGTACATTTCTGGATTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TIQLNKETFFSKLLGGHGGPRSL*YISGFG Trigger: GCCGAATCCAGAAATGTACCACAGACTTCGTGGCCC...ACCGTGTCCACCCAATAGTTTGGAAAAGAAAGTTTCCTTATTTAGCTGTATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CAA 72 bp | AGGAGGGAGTTTAGTGGGACACTGGGAGAAACTCCTTaGACTTTATTTACGAATGGTAAGTTACTTAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RREFSGTLGETP*TLFTNGKLLSP Trigger: AGGGCTAAGTAACTTACCATTCGTAAATAAAGTCAAAGGAGTTTCTCCCAGTGTCCCACTAAACTCCCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
||
| CDS-3UTR GCA 90 bp | GAATTCCAGAAAACTCAAATTCGCTTGCTGTTTAGGACAACAGAAATCTTCTCTCCATTCACACACAGCTaGAAGTCCTGGCTTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EFQKTQIRLLFRTTEIFSPFTHS*KSWLSS Trigger: TGAGGAAAGCCAGGACTTGCAGCTGTGTGTGAATGG...AGAGAAGATTTCTGTTGTCCTAAACAGCAAGCGAATTTGAGTTTTCTGGAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS-3UTR CCA 90 bp | ACAATACAGCTAAATAAGGAAACTTTCTTTTCCAAACTATTGGGTGGACACGGTTCACTTCCGGATTGGTaGAAGATGTGGGTCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TIQLNKETFFSKLLGGHGSLPDW*KMWVHP Trigger: AGGATGGACCCACATCTTCCACCAATCCGGAAGTGA...ACCGTGTCCACCCAATAGTTTGGAAAAGAAAGTTTCCTTATTTAGCTGTATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR CCA 90 bp | GAATTCCAGAAAACTCAAATTCGCTTGCTGTTTAGGACAACAGAAATCTTCTCTATTGTTGTCTATGAGTaGCCAGGCCCCTTCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: EFQKTQIRLLFRTTEIFSIVVYE*PGPFHF Trigger: AAAGTGGAAGGGGCCTGGCCACTCATAGACAACAAT...AGAGAAGATTTCTGTTGTCCTAAACAGCAAGCGAATTTGAGTTTTCTGGAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR TCA 90 bp | GAATTCCAGAAAACTCAAATTCGCTTGCTGTTTAGGACAACAGAAATCTTCTCTTTGCATGTCTGGAAGTaGTCCTTGAAAGTTCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EFQKTQIRLLFRTTEIFSLHVWK*SLKVRR Trigger: CCTTCGAACTTTCAAGGATCACTTCCAGACATGCAA...AGAGAAGATTTCTGTTGTCCTAAACAGCAAGCGAATTTGAGTTTTCTGGAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CAA 72 bp | ACTGTATCTTTGGCTTCTGTAGCTCACACGATCCAGTaGACATATAATTTCCCATTTATGTGCTCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TVSLASVAHTIQ*TYNFPFMCSEL Trigger: CAGTTCAGAGCACATAAATGGGAAATTATATGTCAACTGGATCGTGTGAGCTACAGAAGCCAAAGATACAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| 3UTR CAA 72 bp | TATAATAATACAAAGCTACCTATTCAGGAGTTAACTTaGCTAGCCTCACTGTCTTCTGTTACGTCCCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YNNTKLPIQELT*LASLSSVTSPL Trigger: TAAAGGGGACGTAACAGAAGACAGTGAGGCTAGCAAAGTTAACTCCTGAATAGGTAGCTTTGTATTATTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS GCA 90 bp | CTGCTCAGCCCCGGCGGCGGCGGGGGCGGCGGCGCAGGAAGGTGCTaGTCTCACGCCCATGCCCGTCCATGCAGGTCTCGTGCGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLSPGGGGGGGAGRC*SHAHARPCRSRALL Trigger: CAGGAGCGCACGAGACCTGCATGGACGGGCATGGGCGTGAGAGCAGCACCTTCCTGCGCCGCCGCCCCCGCCGCCGCCGGGGCTGAGCAG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238157.2 |
||
| CDS GCA 90 bp | GGACTGCTCAGCCCCGGCGGCGGCGGGGGCGGCGGCGCAGGAAGGTaGTGCTCTCACGCCCATGCCCGTCCATGCAGGTCTCGTGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLLSPGGGGGGGAGR*CSHAHARPCRSRAL Trigger: GAGCGCACGAGACCTGCATGGACGGGCATGGGCGTGAGAGCAGCACCTTCCTGCGCCGCCGCCCCCGCCGCCGCCGGGGCTGAGCAGTCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238157.2 |
||
| CDS-3UTR CAA 90 bp | CTGCAGTGTGTCCTGCTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGTGCCTCGGCAGGCCTTaGAAGTTCGCTGGGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LQCVLLALGASLCQSASKCLGRP*KFAGCS Trigger: GCTGCACCCAGCGAACTTCAAAGGCCTGCCGAGGCA...CTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS GCA 90 bp | CCCCCACAGCTGCTGGGGAAGATGTGCCAGCGTTCCTTTCTTGGGTaGAGCGCTTCCACATCCTCCAAGGCACTGTGGGCTGCAGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PPQLLGKMCQRSFLG*SASTSSKALWAAAV Trigger: TACTGCTGCAGCCCACAGTGCCTTGGAGGATGTGGAAGCGCTGCACCCAAGAAAGGAACGCTGGCACATCTTCCCCAGCAGCTGTGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS CCA 90 bp | ACATCCCCCACAGCTGCTGGGGAAGATGTGCCAGCGTTCCTTTCTTaGGTGCAGCGCTTCCACATCCTCCAAGGCACTGTGGGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSPTAAGEDVPAFLS*VQRFHILQGTVGCS Trigger: GCTGCAGCCCACAGTGCCTTGGAGGATGTGGAAGCGCTGCACCCAAGAAAGGAACGCTGGCACATCTTCCCCAGCAGCTGTGGGGGATGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS-3UTR CAA 90 bp | CTGCAGTGTGTCCTGCTGGCCCTGGGTGCCAGTCTCTGTCAGTCTGCAAGCAAGCATCTTCTCGTGGCATaGGGTGCTGGCAGTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQCVLLALGASLCQSASKHLLVA*GAGSLQ Trigger: CTGGAGACTGCCAGCACCCAATGCCACGAGAAGATG...CTTGCTTGCAGACTGACAGAGACTGGCACCCAGGGCCAGCAGGACACACTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS CCA 90 bp | GGAAATAGATGTCCTTCACCGGCATCTTCTCGTGGCATTGGGTGCTaGCAGTCTCCAGTGTGTAGCCAGGCCAGGCCTGCACTGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GNRCPSPASSRGIGC*QSPVCSQARPALRW Trigger: CCACCTCAGTGCAGGCCTGGCCTGGCTACACACTGGAGACTGCCAGCACCCAATGCCACGAGAAGATGCCGGTGAAGGACATCTATTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS TCA 90 bp | GCAGTCAGGGCCACGAAGTCTGTGGTACATTTCTGGATTCGGCATTaGGTAGGCTGTTGGCAATCACCTGCGTGGAGCAGCCCAAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AVRATKSVVHFWIRH*VGCWQSPAWSSPRL Trigger: CAGCCTTGGGCTGCTCCACGCAGGTGATTGCCAACAGCCTACTCAATGCCGAATCCAGAAATGTACCACAGACTTCGTGGCCCTGACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170578.3 ENSMUST00000231281.2 ENSMUST00000232638.2 ENSMUST00000238157.2 |
||
| CDS GCA 90 bp | ATTGGAAATAGATGTCCTTCACCGGCATCTTCTCGTGGCATTGGGTaGTGGCAGTCTCCAGTGTGTAGCCAGGCCAGGCCTGCACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IGNRCPSPASSRGIG*WQSPVCSQARPALR Trigger: CCTCAGTGCAGGCCTGGCCTGGCTACACACTGGAGACTGCCAGCACCCAATGCCACGAGAAGATGCCGGTGAAGGACATCTATTTCCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS GCA 90 bp | CCTTTGAAGTTCGCTGGGTGCAGCCAGCATAGGCGCGAAGTGCCTTaGAAAACTCAGAGTCAAACCCATCAGCGGCAGAGTTCAGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLKFAGCSQHRREVP*KTQSQTHQRQSSGV Trigger: CACACCTGAACTCTGCCGCTGATGGGTTTGACTCTGAGTTTTGCAAGGCACTTCGCGCCTATGCTGGCTGCACCCAGCGAACTTCAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170578.3 ENSMUST00000231281.2 ENSMUST00000232638.2 |
||
| CDS GCA 90 bp | AATGGTACACCAGGTTGCCTCGGCAGGCCTTTGAAGTTCGCTGGGTaGAGCCAGCATAGGCGCGAAGTGCCTTGCAAAACTCAGAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: NGTPGCLGRPLKFAG*SQHRREVPCKTQSQ Trigger: TTGACTCTGAGTTTTGCAAGGCACTTCGCGCCTATGCTGGCTGCACCCAGCGAACTTCAAAGGCCTGCCGAGGCAACCTGGTGTACCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170578.3 ENSMUST00000231281.2 ENSMUST00000232638.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGGGCACAGCAAGATGCCTGGTATTTACTTGAAATGGCCACCTCCAGACTGGCCAGCGTTCCTTTCTaGGGTGCAGCGCTTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: AGAQQDAWYLLEMATSRLASVPF*GAALPH Trigger: ATGTGGAAGCGCTGCACCCAAGAAAGGAACGCTGGC...CAGTCTGGAGGTGGCCATTTCAAGTAAATACCAGGCATCTTGCTGTGCCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
||
| CDS CCA 90 bp | CAGTTCCTCTGGCTCATGAGATCACTGATGCCTAACACAGCAGAATaGTACACCAGGTTGCCTCGGCAGGCCTTTGAAGTTCGCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QFLWLMRSLMPNTAE*YTRLPRQAFEVRWV Trigger: CACCCAGCGAACTTCAAAGGCCTGCCGAGGCAACCTGGTGTACCATTCTGCTGTGTTAGGCATCAGTGATCTCATGAGCCAGAGGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170578.3 ENSMUST00000231281.2 ENSMUST00000232638.2 |
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| CDS-3UTR CAA 90 bp | ACTCAAGAACTCTGGGTCCCTCTGCCCGGGCTTACTCCACTCAGCATCCCGCCTGTCGAAGACACACGATaGGAAATAGATGTCCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: TQELWVPLPGLTPLSIPPVEDTR*EIDVLH Trigger: GTGAAGGACATCTATTTCCAATCGTGTGTCTTCGAC...AGGCGGGATGCTGAGTGGAGTAAGCCCGGGCAGAGGGACCCAGAGTTCTTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS GCA 90 bp | CTCGTGCTGTGCTTTGAAGATAATCGTGACCTTGTTTGTAGCAGTTaGACTGGACCCGGGGACCACAGGCACGTTCGTCACTTGAACCGA | + |
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Preference number: 5 (lower is better) Translates to: LVLCFEDNRDLVCSS*TGPGDHRHVRHLNR Trigger: TCGGTTCAAGTGACGAACGTGCCTGTGGTCCCCGGGTCCAGTGCAACTGCTACAAACAAGGTCACGATTATCTTCAAAGCACAGCACGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS-3UTR CAA 90 bp | TTACTCCACTCAGCATCCCGCCTGGCACCAGGTGGCGCTTTCCTGAGCCTGTTTAAGATAATCGTGACCTaGTTTGTAGCAGTTGCACTG | + |
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Preference number: 5 (lower is better) Translates to: LLHSASRLAPGGAFLSLFKIIVT*FVAVAL Trigger: CAGTGCAACTGCTACAAACAAGGTCACGATTATCTT...AAACAGGCTCAGGAAAGCGCCACCTGGTGCCAGGCGGGATGCTGAGTGGAGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS TCA 90 bp | CCACAGGCACGTTCGTCACTTGAACCGAAAGGTAATTGTTGTCTATaGGTGGCCAGGCCCCTTCCACTTTGCATGTCTGGAAGTGATCCT | + |
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Preference number: 5 (lower is better) Translates to: PQARSSLEPKGNCCL*VARPLPLCMSGSDP Trigger: AGGATCACTTCCAGACATGCAAAGTGGAAGGGGCCTGGCCACTCATAGACAACAATTACCTTTCGGTTCAAGTGACGAACGTGCCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170578.3 ENSMUST00000232638.2 |
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| CDS-3UTR CAA 90 bp | GGCTTCACAGCTTTCTTTATTCAGAACACCCACTTTCATCATCGGATGAATTTGTGCCTCGGCAGGCCTTaGAAGTTCGCTGGGTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GFTAFFIQNTHFHHRMNLCLGRP*KFAGCS Trigger: GCTGCACCCAGCGAACTTCAAAGGCCTGCCGAGGCA...CAAATTCATCCGATGATGAAAGTGGGTGTTCTGAATAAAGAAAGCTGTGAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
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| CDS-3UTR CAA 90 bp | GACAACTTTCCTCTCAAATTGACACTTCAAAGGAAGGGAGACAGCTCCATCAGGGATGTGGGTCCATCCTaGGAACAGTTCCTCTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: DNFPLKLTLQRKGDSSIRDVGPS*EQFLWL Trigger: GAGCCAGAGGAACTGTTCCAAGGATGGACCCACATC...CCTGATGGAGCTGTCTCCCTTCCTTTGAAGTGTCAATTTGAGAGGAAAGTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS-3UTR CAA 90 bp | TCTCACACACACATGAGCTCTCACAAGACCTCAGTGGGGAGGGCACATGTTTTTAGATGCATACTCGCCTaGTTTGTAGCAGTTGCACTG | + |
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Preference number: 5 (lower is better) Translates to: SHTHMSSHKTSVGRAHVFRCILA*FVAVAL Trigger: CAGTGCAACTGCTACAAACAAGGCGAGTATGCATCT...AAAAACATGTGCCCTCCCCACTGAGGTCTTGTGAGAGCTCATGTGTGTGTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
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| CDS-3UTR CAA 90 bp | CCTCTAGATCAACACACAATCCCACCCATTGGCAATATCACTTCTAAGAAACACTGGGTCACTTCCGGATaGGTGGAAGATGTGGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: PLDQHTIPPIGNITSKKHWVTSG*VEDVGP Trigger: TGGACCCACATCTTCCACCAATCCGGAAGTGACCCA...GTGTTTCTTAGAAGTGATATTGCCAATGGGTGGGATTGTGTGTTGATCTAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS-3UTR CAA 90 bp | AGGAGGGAGTTTAGTGGGACACTGGGAGAAACTCCTTTGACTTTATTTACGAATTGGGTCACTTCCGGATaGGTGGAAGATGTGGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: RREFSGTLGETPLTLFTNWVTSG*VEDVGP Trigger: TGGACCCACATCTTCCACCAATCCGGAAGTGACCCA...ATTCGTAAATAAAGTCAAAGGAGTTTCTCCCAGTGTCCCACTAAACTCCCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
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| CDS-3UTR CAA 90 bp | CTGGAAAACTGGATGTCTGCTATGGAGAAAACCTGGGTGTGTACACTTCTGTTAAGCAGACACCTGGCCTaGTCCATCATCAATGCATTC | + |
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Preference number: 5 (lower is better) Translates to: LENWMSAMEKTWVCTLLLSRHLA*SIINAF Trigger: GAATGCATTGATGATGGACAAGGCCAGGTGTCTGCT...TAACAGAAGTGTACACACCCAGGTTTTCTCCATAGCAGACATCCAGTTTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS-3UTR CAA 90 bp | AGGAGGGAGTTTAGTGGGACACTGGGAGAAACTCCTTTGACTTTATTTACGAATTTTCTGGATTCGGCATaGAGTAGGCTGTTGGCAATC | + |
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Preference number: 5 (lower is better) Translates to: RREFSGTLGETPLTLFTNFLDSA*SRLLAI Trigger: GATTGCCAACAGCCTACTCAATGCCGAATCCAGAAA...ATTCGTAAATAAAGTCAAAGGAGTTTCTCCCAGTGTCCCACTAAACTCCCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
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| CDS-3UTR CAA 90 bp | ACAATACAGCTAAATAAGGAAACTTTCTTTTCCAAACTATTGGGTGGACACGGTGTCATCTGTCACAGCTaGGTACACCTTCTGATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TIQLNKETFFSKLLGGHGVICHS*VHLLIR Trigger: ACGGATCAGAAGGTGTACCAAGCTGTGACAGATGAC...ACCGTGTCCACCCAATAGTTTGGAAAAGAAAGTTTCCTTATTTAGCTGTATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS-3UTR CAA 90 bp | GAATTCCAGAAAACTCAAATTCGCTTGCTGTTTAGGACAACAGAAATCTTCTCTTTTCTGGATTCGGCATaGAGTAGGCTGTTGGCAATC | + |
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Preference number: 5 (lower is better) Translates to: EFQKTQIRLLFRTTEIFSFLDSA*SRLLAI Trigger: GATTGCCAACAGCCTACTCAATGCCGAATCCAGAAA...AGAGAAGATTTCTGTTGTCCTAAACAGCAAGCGAATTTGAGTTTTCTGGAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS GCA 72 bp | CCCGGCGGCGGCGGGGGCGGCGGCGCAGGAAGGTGCTaGTCTCACGCCCATGCCCGTCCATGCAGGTCTCGT | + |
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Preference number: 6 (lower is better) Translates to: PGGGGGGGAGRC*SHAHARPCRSR Trigger: ACGAGACCTGCATGGACGGGCATGGGCGTGAGAGCAGCACCTTCCTGCGCCGCCGCCCCCGCCGCCGCCGGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238157.2 |
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| CDS GCA 72 bp | AGCCCCGGCGGCGGCGGGGGCGGCGGCGCAGGAAGGTaGTGCTCTCACGCCCATGCCCGTCCATGCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SPGGGGGGGAGR*CSHAHARPCRS Trigger: AGACCTGCATGGACGGGCATGGGCGTGAGAGCAGCACCTTCCTGCGCCGCCGCCCCCGCCGCCGCCGGGGCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238157.2 |
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| CDS GCA 72 bp | GCAGGAAGGTGCTGCTCTCACGCCCATGCCCGTCCATaGAGGTCTCGTGCGCTCCTGCGAGGGCGGCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: AGRCCSHAHARP*RSRALLRGRRR Trigger: GCGCCGCCGCCCTCGCAGGAGCGCACGAGACCTGCATGGACGGGCATGGGCGTGAGAGCAGCACCTTCCTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238157.2 |
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| CDS CCA 72 bp | TGTCCTTCACCGGCATCTTCTCGTGGCATTGGGTGCTaGCAGTCTCCAGTGTGTAGCCAGGCCAGGCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CPSPASSRGIGC*QSPVCSQARPA Trigger: TGCAGGCCTGGCCTGGCTACACACTGGAGACTGCCAGCACCCAATGCCACGAGAAGATGCCGGTGAAGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS CAA 90 bp | TACATCCCCCACAGCTGCTGGGGAAGATGTGCCAGCGTTCCTTTCTaGGGTGCAGCGCTTCCACATCCTCCAAGGCACTGTGGGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: YIPHSCWGRCASVPF*GAALPHPPRHCGLQ Trigger: CTGCAGCCCACAGTGCCTTGGAGGATGTGGAAGCGCTGCACCCAAGAAAGGAACGCTGGCACATCTTCCCCAGCAGCTGTGGGGGATGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS TCA 72 bp | AGCAGAATGGTACACCAGGTTGCCTCGGCAGGCCTTTaGAGTTCGCTGGGTGCAGCCAGCATAGGCGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRMVHQVASAGL*SSLGAASIGAK Trigger: CTTCGCGCCTATGCTGGCTGCACCCAGCGAACTTCAAAGGCCTGCCGAGGCAACCTGGTGTACCATTCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170578.3 ENSMUST00000231281.2 ENSMUST00000232638.2 |
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| CDS GCA 72 bp | CCAGGTTGCCTCGGCAGGCCTTTGAAGTTCGCTGGGTaGAGCCAGCATAGGCGCGAAGTGCCTTGCAAAACT | + |
|
Preference number: 6 (lower is better) Translates to: PGCLGRPLKFAG*SQHRREVPCKT Trigger: AGTTTTGCAAGGCACTTCGCGCCTATGCTGGCTGCACCCAGCGAACTTCAAAGGCCTGCCGAGGCAACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170578.3 ENSMUST00000231281.2 ENSMUST00000232638.2 |
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| CDS GCA 72 bp | AGATGTCCTTCACCGGCATCTTCTCGTGGCATTGGGTaGTGGCAGTCTCCAGTGTGTAGCCAGGCCAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RCPSPASSRGIG*WQSPVCSQARP Trigger: AGGCCTGGCCTGGCTACACACTGGAGACTGCCAGCACCCAATGCCACGAGAAGATGCCGGTGAAGGACATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS GCA 72 bp | CTGCTGGGGAAGATGTGCCAGCGTTCCTTTCTTGGGTaGAGCGCTTCCACATCCTCCAAGGCACTGTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LLGKMCQRSFLG*SASTSSKALWA Trigger: AGCCCACAGTGCCTTGGAGGATGTGGAAGCGCTGCACCCAAGAAAGGAACGCTGGCACATCTTCCCCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS GCA 72 bp | CGGGGGAAGATGCATACTCGCCTTGTTTGTAGCAGTTaGACTGGACCCGGGGACCACAGGCACGTTCGTCAC | + |
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Preference number: 6 (lower is better) Translates to: RGKMHTRLVCSS*TGPGDHRHVRH Trigger: GTGACGAACGTGCCTGTGGTCCCCGGGTCCAGTGCAACTGCTACAAACAAGGCGAGTATGCATCTTCCCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232638.2 |
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| CDS CAA 72 bp | CAGCAGAATGGTACACCAGGTTGCCTCGGCAGGCCTTaGAAGTTCGCTGGGTGCAGCCAGCATAGGCGCGAA | + |
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Preference number: 6 (lower is better) Translates to: QQNGTPGCLGRP*KFAGCSQHRRE Trigger: TTCGCGCCTATGCTGGCTGCACCCAGCGAACTTCAAAGGCCTGCCGAGGCAACCTGGTGTACCATTCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170578.3 ENSMUST00000231281.2 ENSMUST00000232638.2 |
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| CDS CAA 90 bp | TGCCTAACACAGCAGAATGGTACACCAGGTTGCCTCGGCAGGCCTTaGAAGTTCGCTGGGTGCAGCCAGCATAGGCGCGAAGTGCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: CLTQQNGTPGCLGRP*KFAGCSQHRREVPC Trigger: GCAAGGCACTTCGCGCCTATGCTGGCTGCACCCAGCGAACTTCAAAGGCCTGCCGAGGCAACCTGGTGTACCATTCTGCTGTGTTAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170578.3 ENSMUST00000231281.2 ENSMUST00000232638.2 |
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| CDS CCA 72 bp | CTTGGGTGCAGCGCTTCCACATCCTCCAAGGCACTGTaGGCTGCAGCAGTAAAGTTGGCATCACCAGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LGCSASTSSKAL*AAAVKLASPVV Trigger: CACCACTGGTGATGCCAACTTTACTGCTGCAGCCCACAGTGCCTTGGAGGATGTGGAAGCGCTGCACCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS CCA 72 bp | ACAGCTGCTGGGGAAGATGTGCCAGCGTTCCTTTCTTaGGTGCAGCGCTTCCACATCCTCCAAGGCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TAAGEDVPAFLS*VQRFHILQGTV Trigger: CACAGTGCCTTGGAGGATGTGGAAGCGCTGCACCCAAGAAAGGAACGCTGGCACATCTTCCCCAGCAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS CAA 72 bp | AGGCAGGCTGTGCCCCAGGATAGCAGACACCTGGCCTaGTCCATCATCAATGCATTCACTCATGGGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RQAVPQDSRHLA*SIINAFTHGAA Trigger: GGCTGCCCCATGAGTGAATGCATTGATGATGGACAAGGCCAGGTGTCTGCTATCCTGGGGCACAGCCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS CAA 72 bp | CACAGCTGCTGGGGAAGATGTGCCAGCGTTCCTTTCTaGGGTGCAGCGCTTCCACATCCTCCAAGGCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: HSCWGRCASVPF*GAALPHPPRHC Trigger: ACAGTGCCTTGGAGGATGTGGAAGCGCTGCACCCAAGAAAGGAACGCTGGCACATCTTCCCCAGCAGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS CAA 90 bp | GGTGGTGTGAGGCAGGCTGTGCCCCAGGATAGCAGACACCTGGCCTaGTCCATCATCAATGCATTCACTCATGGGGCAGCCATTCACACA | + |
|
Preference number: 6 (lower is better) Translates to: GGVRQAVPQDSRHLA*SIINAFTHGAAIHT Trigger: TGTGTGAATGGCTGCCCCATGAGTGAATGCATTGATGATGGACAAGGCCAGGTGTCTGCTATCCTGGGGCACAGCCTGCCTCACACCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS CAA 90 bp | ACACGATTGGAAATAGATGTCCTTCACCGGCATCTTCTCGTGGCATaGGGTGCTGGCAGTCTCCAGTGTGTAGCCAGGCCAGGCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TRLEIDVLHRHLLVA*GAGSLQCVARPGLH Trigger: GTGCAGGCCTGGCCTGGCTACACACTGGAGACTGCCAGCACCCAATGCCACGAGAAGATGCCGGTGAAGGACATCTATTTCCAATCGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS GCA 72 bp | TTCGCTGGGTGCAGCCAGCATAGGCGCGAAGTGCCTTaGAAAACTCAGAGTCAAACCCATCAGCGGCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: FAGCSQHRREVP*KTQSQTHQRQS Trigger: ACTCTGCCGCTGATGGGTTTGACTCTGAGTTTTGCAAGGCACTTCGCGCCTATGCTGGCTGCACCCAGCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170578.3 ENSMUST00000231281.2 ENSMUST00000232638.2 |
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| CDS GCA 72 bp | TTAGGTAGCGACCCAGCTGTCGCACAAACACTGTGGTaGCTATGTAGCGGGCATGCATCTCTACGTAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGSDPAVAQTLW*LCSGHASLRSG Trigger: GCCGCTACGTAGAGATGCATGCCCGCTACATAGGCACCACAGTGTTTGTGCGACAGCTGGGTCGCTACCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS CCA 72 bp | GGGTTAGGTAGCGACCCAGCTGTCGCACAAACACTGTaGTGCCTATGTAGCGGGCATGCATCTCTACGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: GLGSDPAVAQTL*CLCSGHASLRS Trigger: GCTACGTAGAGATGCATGCCCGCTACATAGGCACCACAGTGTTTGTGCGACAGCTGGGTCGCTACCTAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS CAA 90 bp | TGCAGTCAGGGCCACGAAGTCTGTGGTACATTTCTGGATTCGGCATaGAGTAGGCTGTTGGCAATCACCTGCGTGGAGCAGCCCAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CSQGHEVCGTFLDSA*SRLLAITCVEQPKA Trigger: AGCCTTGGGCTGCTCCACGCAGGTGATTGCCAACAGCCTACTCAATGCCGAATCCAGAAATGTACCACAGACTTCGTGGCCCTGACTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170578.3 ENSMUST00000231281.2 ENSMUST00000232638.2 ENSMUST00000238157.2 |
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| CDS CAA 90 bp | TGTAGCAGTTGCACTGGACCCGGGGACCACAGGCACGTTCGTCACTaGAACCGAAAGGTAATTGTTGTCTATGAGTGGCCAGGCCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CSSCTGPGDHRHVRH*NRKVIVVYEWPGPF Trigger: GAAGGGGCCTGGCCACTCATAGACAACAATTACCTTTCGGTTCAAGTGACGAACGTGCCTGTGGTCCCCGGGTCCAGTGCAACTGCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170578.3 ENSMUST00000232638.2 |
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| CDS CAA 72 bp | GAAATAGATGTCCTTCACCGGCATCTTCTCGTGGCATaGGGTGCTGGCAGTCTCCAGTGTGTAGCCAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: EIDVLHRHLLVA*GAGSLQCVARP Trigger: TGGCCTGGCTACACACTGGAGACTGCCAGCACCCAATGCCACGAGAAGATGCCGGTGAAGGACATCTATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS TCA 72 bp | GCCACGAAGTCTGTGGTACATTTCTGGATTCGGCATTaGGTAGGCTGTTGGCAATCACCTGCGTGGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ATKSVVHFWIRH*VGCWQSPAWSS Trigger: GCTGCTCCACGCAGGTGATTGCCAACAGCCTACTCAATGCCGAATCCAGAAATGTACCACAGACTTCGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170578.3 ENSMUST00000231281.2 ENSMUST00000232638.2 ENSMUST00000238157.2 |
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| CDS GCA 72 bp | CTCAGAGTCAAACCCATCAGCGGCAGAGTTCAGGTGTaGAGTCAGGGCCACGAAGTCTGTGGTACATTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LRVKPISGRVQV*SQGHEVCGTFL Trigger: CAGAAATGTACCACAGACTTCGTGGCCCTGACTGCACACCTGAACTCTGCCGCTGATGGGTTTGACTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170578.3 ENSMUST00000231281.2 ENSMUST00000232638.2 ENSMUST00000238157.2 |
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| CDS CCA 72 bp | ACACCTGGCCTTGTCCATCATCAATGCATTCACTCATaGGGCAGCCATTCACACACAGCTGCAAGTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TPGLVHHQCIHS*GSHSHTAASPG Trigger: GCCAGGACTTGCAGCTGTGTGTGAATGGCTGCCCCATGAGTGAATGCATTGATGATGGACAAGGCCAGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS CAA 72 bp | GGCCACGAAGTCTGTGGTACATTTCTGGATTCGGCATaGAGTAGGCTGTTGGCAATCACCTGCGTGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GHEVCGTFLDSA*SRLLAITCVEQ Trigger: CTGCTCCACGCAGGTGATTGCCAACAGCCTACTCAATGCCGAATCCAGAAATGTACCACAGACTTCGTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170578.3 ENSMUST00000231281.2 ENSMUST00000232638.2 ENSMUST00000238157.2 |
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| CDS GCA 72 bp | TGCTTTGAAGATAATCGTGACCTTGTTTGTAGCAGTTaGACTGGACCCGGGGACCACAGGCACGTTCGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: CFEDNRDLVCSS*TGPGDHRHVRH Trigger: GTGACGAACGTGCCTGTGGTCCCCGGGTCCAGTGCAACTGCTACAAACAAGGTCACGATTATCTTCAAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170578.3 |
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| CDS CCA 72 bp | TGTGGTAGTTACAGGGGTCATGGGTCACTTCCGGATTaGTGGAAGATGTGGGTCCATCCTTGGAACAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CGSYRGHGSLPD*WKMWVHPWNSS Trigger: GGAACTGTTCCAAGGATGGACCCACATCTTCCACCAATCCGGAAGTGACCCATGACCCCTGTAACTACCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170578.3 ENSMUST00000231281.2 ENSMUST00000232638.2 |
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| CDS TCA 72 bp | AGGCCCCTTCCACTTTGCATGTCTGGAAGTGATCCTTaGAAGTTCGAAGGTGAGGGTCTCCAAACAAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RPLPLCMSGSDP*KFEGEGLQTSH Trigger: GTGGCTTGTTTGGAGACCCTCACCTTCGAACTTTCAAGGATCACTTCCAGACATGCAAAGTGGAAGGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170578.3 ENSMUST00000232638.2 |
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| CDS CCA 72 bp | TGGCTCATGAGATCACTGATGCCTAACACAGCAGAATaGTACACCAGGTTGCCTCGGCAGGCCTTTGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: WLMRSLMPNTAE*YTRLPRQAFEV Trigger: AACTTCAAAGGCCTGCCGAGGCAACCTGGTGTACCATTCTGCTGTGTTAGGCATCAGTGATCTCATGAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170578.3 ENSMUST00000231281.2 ENSMUST00000232638.2 |
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