Pregenerated sensors for RGMA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070509Ensembl transcript IDs: ENSMUST00000094312.12, ENSMUST00000119206.3, ENSMUST00000139780.3
Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCGTCAGCTGCGGAGGCCACCTCTGCTGAACGGTTGGTTGGTCTaGAGAGAACACTGGGTCTCAGGGAGCCAGCCCACCTGCTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: GRQLRRPPLLNGWLV*REHWVSGSQPTCWA Trigger: AGCCCAGCAGGTGGGCTGGCTCCCTGAGACCCAGTGTTCTCTGCAGACCAACCAACCGTTCAGCAGAGGTGGCCTCCGCAGCTGACGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR GCA 90 bp | CACACCCTCCCTTCAACTGTGGGGCTTTGCAGGCAGGTGCCTGGATaGAGCACCTCAGACACATCCACAGTAGCTGGATGCACGGGACAG | + |
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Preference number: 1 (lower is better) Translates to: HTLPSTVGLCRQVPG*STSDTSTVAGCTGQ Trigger: CTGTCCCGTGCATCCAGCTACTGTGGATGTGTCTGAGGTGCTGCATCCAGGCACCTGCCTGCAAAGCCCCACAGTTGAAGGGAGGGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR GCA 90 bp | GAACCCGCCAGGCAGGGTCATGGTGCAGGAAGGCCTCTTAGAAGGTaGTCCCCTCAGTTCCCACAAAGAAATGCAGACAAGAGGGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: EPARQGHGAGRPLRR*SPQFPQRNADKRAG Trigger: CCCAGCCCTCTTGTCTGCATTTCTTTGTGGGAACTGAGGGGAGCACCTTCTAAGAGGCCTTCCTGCACCATGACCCTGCCTGGCGGGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR CCA 90 bp | AAAACACACCCTCCCTTCAACTGTGGGGCTTTGCAGGCAGGTGCCTaGATGCAGCACCTCAGACACATCCACAGTAGCTGGATGCACGGG | + |
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Preference number: 1 (lower is better) Translates to: KTHPPFNCGALQAGA*MQHLRHIHSSWMHG Trigger: CCCGTGCATCCAGCTACTGTGGATGTGTCTGAGGTGCTGCATCCAGGCACCTGCCTGCAAAGCCCCACAGTTGAAGGGAGGGTGTGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR TCA 90 bp | TACACGCAGTGGCTCTCCACACAGGTCGCACACAGGTGGACTCAGTaGGGGGTCCCCACTTCCAAGCAGAACGTGATCAAACACAACCAA | + |
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Preference number: 1 (lower is better) Translates to: YTQWLSTQVAHRWTQ*GVPTSKQNVIKHNQ Trigger: TTGGTTGTGTTTGATCACGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTCCACCTGTGTGCGACCTGTGTGGAGAGCCACTGCGTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR GCA 90 bp | TTAGACCTCAGGCCAAAACACACCCTCCCTTCAACTGTGGGGCTTTaGAGGCAGGTGCCTGGATGCAGCACCTCAGACACATCCACAGTA | + |
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Preference number: 1 (lower is better) Translates to: LDLRPKHTLPSTVGL*RQVPGCSTSDTSTV Trigger: TACTGTGGATGTGTCTGAGGTGCTGCATCCAGGCACCTGCCTGCAAAGCCCCACAGTTGAAGGGAGGGTGTGTTTTGGCCTGAGGTCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR GCA 90 bp | CTACTGTCACAAAAACACAGCATCAATCACCACAACCTTGTTGCGTaGACAAATCAAGAGGGGAGAGCTGTCCCACGCGCCCTTCACCCC | + |
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Preference number: 1 (lower is better) Translates to: LLSQKHSINHHNLVA*TNQEGRAVPRALHP Trigger: GGGGTGAAGGGCGCGTGGGACAGCTCTCCCCTCTTGATTTGTGCACGCAACAAGGTTGTGGTGATTGATGCTGTGTTTTTGTGACAGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR GCA 90 bp | CTCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTaGTCTCTCCCTCACACAACTCTACTGTCACAAAAACACAGCATC | + |
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Preference number: 1 (lower is better) Translates to: LWFAHSHDGGQGRGS*SLPHTTLLSQKHSI Trigger: GATGCTGTGTTTTTGTGACAGTAGAGTTGTGTGAGGGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR TCA 90 bp | GATGGCAGGAACCGGAGGATCACGTCTCTGTTGAAACATTCAGAATaGCAGCACTTCGATTTCTTAAGTGCAATGGGAGAGGGGCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: DGRNRRITSLLKHSE*QHFDFLSAMGEGQR Trigger: CCTCTGCCCCTCTCCCATTGCACTTAAGAAATCGAAGTGCTGTCATTCTGAATGTTTCAACAGAGACGTGATCCTCCGGTTCCTGCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR GCA 90 bp | AACTCTACTGTCACAAAAACACAGCATCAATCACCACAACCTTGTTaGGTGCACAAATCAAGAGGGGAGAGCTGTCCCACGCGCCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: NSTVTKTQHQSPQPC*VHKSRGESCPTRPS Trigger: TGAAGGGCGCGTGGGACAGCTCTCCCCTCTTGATTTGTGCACGCAACAAGGTTGTGGTGATTGATGCTGTGTTTTTGTGACAGTAGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGAGACCCCAGGTGCGCGAGAGTGTGTaGGAGGGCACAGGGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: AGQLALSTGSAAHALRPQVRESV*EGTGAP Trigger: TGGGGCCCCTGTGCCCTCCCACACACTCTCGCGCAC...CTGGGGTCTCAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR GCA 90 bp | CACAGGTCGCACACAGGTGGACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGGGCTGGGGTAGGCTCTaGAGGGCCGCTGGCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: HRSHTGGLSEGSPLPSRTGWGRL*RAAGWV Trigger: CACCCAGCCAGCGGCCCTGCAGAGCCTACCCCAGCC...CGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTCCACCTGTGTGCGACCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGACAGGGCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGATCTGCAGACGGCTCTaGGGGCACCATGCTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: EDRAGQLALSTGSAAHALICRRL*GHHAQA Trigger: GGCCTGAGCATGGTGCCCTCAGAGCCGTCTGCAGAT...CAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGCCCTGTCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR CCA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACGTCTGCAGAGAACACTaGGTCTCAGGGAGCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: DARDSPCVALGRKGPGGHVCREH*VSGSQP Trigger: GGGCTGGCTCCCTGAGACCCAGTGTTCTCTGCAGAC...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR TCA 90 bp | CGGCCAAAACATCTGCAGACGGCTCTGAGGGCACCATGCTCAGGCCGTCAGCTGGGAGGCCACCTCTGCTaGACGGTTGGTTGGTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: RPKHLQTALRAPCSGRQLGGHLC*TVGWSA Trigger: TGCAGACCAACCAACCGTTCAGCAGAGGTGGCCTCC...CAGCTGACGGCCTGAGCATGGTGCCCTCAGAGCCGTCTGCAGATGTTTTGGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR GCA 90 bp | GAGGACAGGGCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGTCAACTGTGGGGCTTTaGAGGCAGGTGCCTGGATGC | + |
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Preference number: 2 (lower is better) Translates to: EDRAGQLALSTGSAAHALSTVGL*RQVPGC Trigger: GCATCCAGGCACCTGCCTGCAAAGCCCCACAGTTGA...CAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGCCCTGTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGGTCATGGTGCAGGAAGGCCTCTTAGAAGGTGCTCCCCTCAGTTCCCACGGAGGCCACCTCTGCTaGACGGTTGGTTGGTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: GRVMVQEGLLEGAPLSSHGGHLC*TVGWSA Trigger: TGCAGACCAACCAACCGTTCAGCAGAGGTGGCCTCC...GTGGGAACTGAGGGGAGCACCTTCTAAGAGGCCTTCCTGCACCATGACCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTGCTCTCTCCATCTGCAGACGGCTCTaGGGGCACCATGCTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SGSHIHTMGVRVEGAALSICRRL*GHHAQA Trigger: GGCCTGAGCATGGTGCCCTCAGAGCCGTCTGCAGAT...GGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGACAGGGCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGTGTCTCAGTGCATTGTaGGGGTGTGGAAGGAGCCGA | + |
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Preference number: 2 (lower is better) Translates to: EDRAGQLALSTGSAAHALCLSAL*GCGRSR Trigger: TCGGCTCCTTCCACACCCTCACAATGCACTGAGACA...CAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGCCCTGTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCAGCTACCCACGTGGTTTTGGCAGGGGTTTGGACCTCTGGGAGGGAGAGAAGCTAGGTTCCCAGTaGCAGGCCTCTCTCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: PPSYPRGFGRGLDLWEGEKLGSQ*QASLWL Trigger: CAGCCAGAGAGAGGCCTGTCACTGGGAACCTAGCTT...CTCTCCCTCCCAGAGGTCCAAACCCCTGCCAAAACCACGTGGGTAGCTGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGAGACCCCAGCAGGGTAGAGGGAGCTaGTCTCTCCCTCACACAACT | + |
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Preference number: 2 (lower is better) Translates to: AGQLALSTGSAAHALRPQQGRGS*SLPHTT Trigger: AGTTGTGTGAGGGAGAGAGCAGCTCCCTCTACCCTG...CTGGGGTCTCAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCAGCTACCCACGTGGTTTTGGCAGGGGTTTGGACCTCTGGGAGGGAGAGCCTATCCACTGGATCTaGTGCTCATGCCCTGAGACC | + |
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Preference number: 2 (lower is better) Translates to: PPSYPRGFGRGLDLWEGEPIHWI*CSCPET Trigger: GGTCTCAGGGCATGAGCAGCAGATCCAGTGGATAGG...CTCTCCCTCCCAGAGGTCCAAACCCCTGCCAAAACCACGTGGGTAGCTGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR CCA 90 bp | CACAGGTCGCACACAGGTGGACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTGGCTCTGGGCTCTGTaGATGGACTCTGGCCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: HRSHTGGLSEGSPLPSRTWLWAL*MDSGLE Trigger: CTCAAGGCCAGAGTCCATCCACAGAGCCCAGAGCCA...CGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTCCACCTGTGTGCGACCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR CAA 90 bp | GCTAGGTTCCCAGTGACAGGCCTCTCTCTGGCTGTGGCCAGAGAGTaGAAAGAAGGTTCTAGTGGGAGGAGAACCCGCCAGGCAGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: ARFPVTGLSLAVARE*KEGSSGRRTRQAGS Trigger: TGACCCTGCCTGGCGGGTTCTCCTCCCACTAGAACCTTCTTTCAACTCTCTGGCCACAGCCAGAGAGAGGCCTGTCACTGGGAACCTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR GCA 90 bp | CACAGGTCGCACACAGGTGGACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGCAGGGTAGAGGGAGCTaGTCTCTCCCTCACACAACT | + |
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Preference number: 2 (lower is better) Translates to: HRSHTGGLSEGSPLPSRTQGRGS*SLPHTT Trigger: AGTTGTGTGAGGGAGAGAGCAGCTCCCTCTACCCTG...CGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTCCACCTGTGTGCGACCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCAGCTACCCACGTGGTTTTGGCAGGGGTTTGGACCTCTGGGAGGGAGAGAGGCCTCTTAGAAGGTaGTCCCCTCAGTTCCCACAA | + |
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Preference number: 2 (lower is better) Translates to: PPSYPRGFGRGLDLWEGERPLRR*SPQFPQ Trigger: TTGTGGGAACTGAGGGGAGCACCTTCTAAGAGGCCT...CTCTCCCTCCCAGAGGTCCAAACCCCTGCCAAAACCACGTGGGTAGCTGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCAGCTACCCACGTGGTTTTGGCAGGGGTTTGGACCTCTGGGAGGGAGAGGAACAGCAGAAGAGATaGGAATGGCTCTGGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PPSYPRGFGRGLDLWEGEEQQKR*EWLWAL Trigger: CAGAGCCCAGAGCCATTCCCATCTCTTCTGCTGTTC...CTCTCCCTCCCAGAGGTCCAAACCCCTGCCAAAACCACGTGGGTAGCTGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGAGACCCCAGTCACCACAACCTTGTTaGGTGCACAAATCAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: AGQLALSTGSAAHALRPQSPQPC*VHKSRG Trigger: CCCTCTTGATTTGTGCACGCAACAAGGTTGTGGTGA...CTGGGGTCTCAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGAGACCCCAGCATGGGCTTAGTGTGTaGGAGTGTGCTTGTGTAACA | + |
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Preference number: 2 (lower is better) Translates to: AGQLALSTGSAAHALRPQHGLSV*ECACVT Trigger: TGTTACACAAGCACACTCGCACACACTAAGCCCATG...CTGGGGTCTCAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR GCA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACTCTTGGAAATGCTTCTaGCTTCCTGATGTGGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: DARDSPCVALGRKGPGGHSWKCF*LPDVGS Trigger: AGACCCCACATCAGGAAGGCAGAAGCATTTCCAAGA...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGGTCATGGTGCAGGAAGGCCTCTTAGAAGGTGCTCCCCTCAGTTCCCACGAGGGCACAGCCTCCTaGCTACAAGGTTACATCCAT | + |
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Preference number: 2 (lower is better) Translates to: GRVMVQEGLLEGAPLSSHEGTAS*LQGYIH Trigger: ATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCCTC...GTGGGAACTGAGGGGAGCACCTTCTAAGAGGCCTTCCTGCACCATGACCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR CAA 90 bp | CTTAGACCTCAGGCCAAAACACACCCTCCCTTCAACTGTGGGGCTTaGCAGGCAGGTGCCTGGATGCAGCACCTCAGACACATCCACAGT | + |
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Preference number: 2 (lower is better) Translates to: LRPQAKTHPPFNCGA*QAGAWMQHLRHIHS Trigger: ACTGTGGATGTGTCTGAGGTGCTGCATCCAGGCACCTGCCTGCAAAGCCCCACAGTTGAAGGGAGGGTGTGTTTTGGCCTGAGGTCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR CCA 90 bp | GTAGCTGCTGACCAGCAGCAGGGGAAGTCTAGGAGACAAGTGAAAGGGCAGAGGCACATCCACAGTAGCTaGATGCACGGGACAGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: VAADQQQGKSRRQVKGQRHIHSS*MHGTVP Trigger: AGGGACTGTCCCGTGCATCCAGCTACTGTGGATGTG...CCTCTGCCCTTTCACTTGTCTCCTAGACTTCCCCTGCTGCTGGTCAGCAGCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR GCA 90 bp | CACAGGTCGCACACAGGTGGACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTCACCACAACCTTGTTaGGTGCACAAATCAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: HRSHTGGLSEGSPLPSRTSPQPC*VHKSRG Trigger: CCCTCTTGATTTGTGCACGCAACAAGGTTGTGGTGA...CGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTCCACCTGTGTGCGACCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTAGAAGGTGCTCCCCTCAGTTCCCACAAAGAAATGCAGACAAGAGGGCTGTCTGCAGAGAACACTaGGTCTCAGGGAGCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: PLRRCSPQFPQRNADKRAVCREH*VSGSQP Trigger: GGGCTGGCTCCCTGAGACCCAGTGTTCTCTGCAGAC...AGCCCTCTTGTCTGCATTTCTTTGTGGGAACTGAGGGGAGCACCTTCTAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTAGAAGGTGCTCCCCTCAGTTCCCACAAAGAAATGCAGACAAGAGGGCTCCCTCCCTTCAACTGTaGGGCTTTGCAGGCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: PLRRCSPQFPQRNADKRAPSLQL*GFAGRC Trigger: GCACCTGCCTGCAAAGCCCCACAGTTGAAGGGAGGG...AGCCCTCTTGTCTGCATTTCTTTGTGGGAACTGAGGGGAGCACCTTCTAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR CAA 90 bp | AGGGACCAGGAGGGCACAGCCTCCTGGCTACAAGGTTACATCCATTaGCTAAAGATGCTGAGCAGGGCTCTCTGGTATGCCCTTAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: RDQEGTASWLQGYIH*LKMLSRALWYALSH Trigger: GTGACTAAGGGCATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCCTCCTGGTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCTTAGAAGGTGCTCCCCTCAGTTCCCACAAAGAAATGCAGACAAGAGGGCTTCAACTGTGGGGCTTTaGAGGCAGGTGCCTGGATGC | + |
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Preference number: 2 (lower is better) Translates to: PLRRCSPQFPQRNADKRASTVGL*RQVPGC Trigger: GCATCCAGGCACCTGCCTGCAAAGCCCCACAGTTGA...AGCCCTCTTGTCTGCATTTCTTTGTGGGAACTGAGGGGAGCACCTTCTAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTCTCTGGCTGTGGCCAGAGAGTTGAAAGAAGGTTCTAGTGGGAGGAGAACCCCTATCCACTGGATCTaGTGCTCATGCCCTGAGACC | + |
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Preference number: 2 (lower is better) Translates to: LSLAVARELKEGSSGRRTPIHWI*CSCPET Trigger: GGTCTCAGGGCATGAGCAGCAGATCCAGTGGATAGG...GGTTCTCCTCCCACTAGAACCTTCTTTCAACTCTCTGGCCACAGCCAGAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR CCA 90 bp | GACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTGATCAAACACAACCAAAAGTCTGCAGAGAACACTaGGTCTCAGGGAGCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: DSVRGPHFQAERDQTQPKVCREH*VSGSQP Trigger: GGGCTGGCTCCCTGAGACCCAGTGTTCTCTGCAGAC...TTTTGGTTGTGTTTGATCACGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCTGGCTGTGGCCAGAGAGTTGAAAGAAGGTTCTAGTGGGAGGAGAACCCACATCCACAGTAGCTaGATGCACGGGACAGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LSLAVARELKEGSSGRRTHIHSS*MHGTVP Trigger: AGGGACTGTCCCGTGCATCCAGCTACTGTGGATGTG...GGTTCTCCTCCCACTAGAACCTTCTTTCAACTCTCTGGCCACAGCCAGAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR CCA 90 bp | GACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTGATCAAACACAACCAAAAGAGAGGGGCAGAGGGTaGAGCCAGAGTTGGGGATCT | + |
|
Preference number: 2 (lower is better) Translates to: DSVRGPHFQAERDQTQPKERGRG*SQSWGS Trigger: AGATCCCCAACTCTGGCTCCACCCTCTGCCCCTCTC...TTTTGGTTGTGTTTGATCACGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR TCA 90 bp | GACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTGATCAAACACAACCAAAAATGCTTCTGCCTTCCTaGTGTGGGGTCTTGGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: DSVRGPHFQAERDQTQPKMLLPS*CGVLGV Trigger: CACCCCCAAGACCCCACATCAGGAAGGCAGAAGCAT...TTTTGGTTGTGTTTGATCACGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR TCA 90 bp | GACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTGATCAAACACAACCAAAACCAGAGTTGGGGATCTaGGCCCATGAATGGTACCGC | + |
|
Preference number: 2 (lower is better) Translates to: DSVRGPHFQAERDQTQPKPELGI*AHEWYR Trigger: GCGGTACCATTCATGGGCTCAGATCCCCAACTCTGG...TTTTGGTTGTGTTTGATCACGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR GCA 90 bp | GTAGCTGCTGACCAGCAGCAGGGGAAGTCTAGGAGACAAGTGAAAGGGCAGAGGTCACCACAACCTTGTTaGGTGCACAAATCAAGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: VAADQQQGKSRRQVKGQRSPQPC*VHKSRG Trigger: CCCTCTTGATTTGTGCACGCAACAAGGTTGTGGTGA...CCTCTGCCCTTTCACTTGTCTCCTAGACTTCCCCTGCTGCTGGTCAGCAGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR GCA 90 bp | GTAGCTGCTGACCAGCAGCAGGGGAAGTCTAGGAGACAAGTGAAAGGGCAGAGGTCTTGGAAATGCTTCTaGCTTCCTGATGTGGGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: VAADQQQGKSRRQVKGQRSWKCF*LPDVGS Trigger: AGACCCCACATCAGGAAGGCAGAAGCATTTCCAAGA...CCTCTGCCCTTTCACTTGTCTCCTAGACTTCCCCTGCTGCTGGTCAGCAGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCTCTGGCTGTGGCCAGAGAGTTGAAAGAAGGTTCTAGTGGGAGGAGAACCGTTCCCACAAAGAAATaGAGACAAGAGGGCTGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LSLAVARELKEGSSGRRTVPTKK*RQEGWG Trigger: CCCCCAGCCCTCTTGTCTGCATTTCTTTGTGGGAAC...GGTTCTCCTCCCACTAGAACCTTCTTTCAACTCTCTGGCCACAGCCAGAGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTTAGAAGGTGCTCCCCTCAGTTCCCACAAAGAAATGCAGACAAGAGGGCTGAGGGCACAGCCTCCTaGCTACAAGGTTACATCCAT | + |
|
Preference number: 2 (lower is better) Translates to: PLRRCSPQFPQRNADKRAEGTAS*LQGYIH Trigger: ATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCCTC...AGCCCTCTTGTCTGCATTTCTTTGTGGGAACTGAGGGGAGCACCTTCTAAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR CAA 90 bp | CAACTCTACTGTCACAAAAACACAGCATCAATCACCACAACCTTGTaGCGTGCACAAATCAAGAGGGGAGAGCTGTCCCACGCGCCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: QLYCHKNTASITTTL*RAQIKRGELSHAPF Trigger: GAAGGGCGCGTGGGACAGCTCTCCCCTCTTGATTTGTGCACGCAACAAGGTTGTGGTGATTGATGCTGTGTTTTTGTGACAGTAGAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR CAA 90 bp | ACACAACTCTACTGTCACAAAAACACAGCATCAATCACCACAACCTaGTTGCGTGCACAAATCAAGAGGGGAGAGCTGTCCCACGCGCCC | + |
|
Preference number: 2 (lower is better) Translates to: TQLYCHKNTASITTT*LRAQIKRGELSHAP Trigger: GGGCGCGTGGGACAGCTCTCCCCTCTTGATTTGTGCACGCAACAAGGTTGTGGTGATTGATGCTGTGTTTTTGTGACAGTAGAGTTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCTCTGGCTGTGGCCAGAGAGTTGAAAGAAGGTTCTAGTGGGAGGAGAACCTCTTGGAAATGCTTCTaGCTTCCTGATGTGGGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LSLAVARELKEGSSGRRTSWKCF*LPDVGS Trigger: AGACCCCACATCAGGAAGGCAGAAGCATTTCCAAGA...GGTTCTCCTCCCACTAGAACCTTCTTTCAACTCTCTGGCCACAGCCAGAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR CCA 90 bp | GACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTGATCAAACACAACCAAAACAGAAGAGATGGGAATaGCTCTGGGCTCTGTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: DSVRGPHFQAERDQTQPKQKRWE*LWALWM Trigger: CATCCACAGAGCCCAGAGCCATTCCCATCTCTTCTG...TTTTGGTTGTGTTTGATCACGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTGGTATCATGGGCTTAGTGTGTaGGAGTGTGCTTGTGTAACA | + |
|
Preference number: 2 (lower is better) Translates to: WLQGYIHLLKMLSRALWYHGLSV*ECACVT Trigger: TGTTACACAAGCACACTCGCACACACTAAGCCCATG...ATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTGGTATCTGGGGATAGAATCTTaGAAATGCTTCTGCCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: WLQGYIHLLKMLSRALWYLGIES*KCFCLP Trigger: AGGAAGGCAGAAGCATTTCCAAGATTCTATCCCCAG...ATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR GCA 72 bp | CAGGGCAGGCCAGCTGGCCCTATCCACTGGATCTGCTaGTCATGCCCTGAGACCCCAGCCCCTCTCTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: QGRPAGPIHWIC*SCPETPAPLWW Trigger: CCACCAGAGAGGGGCTGGGGTCTCAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR GCA 72 bp | GGACAGGGCAGGCCAGCTGGCCCTATCCACTGGATCTaGTGCTCATGCCCTGAGACCCCAGCCCCTCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GQGRPAGPIHWI*CSCPETPAPLW Trigger: CCAGAGAGGGGCTGGGGTCTCAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGCCCTGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR CCA 72 bp | GGCAGAGGACAGGGCAGGCCAGCTGGCCCTATCCACTaGATCTGCTGCTCATGCCCTGAGACCCCAGCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GRGQGRPAGPIH*ICCSCPETPAP Trigger: AGGGGCTGGGGTCTCAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGCCCTGTCCTCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR GCA 72 bp | CGGCCAAAACATCTGCAGACGGCTCTGAGGGCACCATaGTCAGGCCGTCAGCTGCGGAGGCCACCTCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RPKHLQTALRAP*SGRQLRRPPLL Trigger: CAGCAGAGGTGGCCTCCGCAGCTGACGGCCTGAGCATGGTGCCCTCAGAGCCGTCTGCAGATGTTTTGGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR GCA 72 bp | CTGCGGAGGCCACCTCTGCTGAACGGTTGGTTGGTCTaGAGAGAACACTGGGTCTCAGGGAGCCAGCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: LRRPPLLNGWLV*REHWVSGSQPT Trigger: GGTGGGCTGGCTCCCTGAGACCCAGTGTTCTCTGCAGACCAACCAACCGTTCAGCAGAGGTGGCCTCCGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCCCCAGAGTAGGTGTGCAGCAGTCAGCCGGGCCTGTCTCAGTGCATTGTGAGCTGCTGAACGGTTGGTaGGTCTGCAGAGAACACTGG | + |
|
Preference number: 3 (lower is better) Translates to: GPRVGVQQSAGPVSVHCELLNGW*VCREHW Trigger: CCAGTGTTCTCTGCAGACCAACCAACCGTTCAGCAG...CTCACAATGCACTGAGACAGGCCCGGCTGACTGCTGCACACCTACTCTGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR CAA 90 bp | CACAGGTCGCACACAGGTGGACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTTCAACTGTGGGGCTTaGCAGGCAGGTGCCTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: HRSHTGGLSEGSPLPSRTFNCGA*QAGAWM Trigger: CATCCAGGCACCTGCCTGCAAAGCCCCACAGTTGAA...CGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTCCACCTGTGTGCGACCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR CAA 90 bp | GTAGCTGCTGACCAGCAGCAGGGGAAGTCTAGGAGACAAGTGAAAGGGCAGAGGTTCAACTGTGGGGCTTaGCAGGCAGGTGCCTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: VAADQQQGKSRRQVKGQRFNCGA*QAGAWM Trigger: CATCCAGGCACCTGCCTGCAAAGCCCCACAGTTGAA...CCTCTGCCCTTTCACTTGTCTCCTAGACTTCCCCTGCTGCTGGTCAGCAGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR GCA 72 bp | AGGCCAAAACACACCCTCCCTTCAACTGTGGGGCTTTaGAGGCAGGTGCCTGGATGCAGCACCTCAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: RPKHTLPSTVGL*RQVPGCSTSDT Trigger: TGTGTCTGAGGTGCTGCATCCAGGCACCTGCCTGCAAAGCCCCACAGTTGAAGGGAGGGTGTGTTTTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTGCTCTCTCCCATCCTGAGGCTGACTaGAGCCCTCAGACAAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SGSHIHTMGVRVEGAALSHPEAD*SPQTKG Trigger: TCCTTTTGTCTGAGGGCTCAAGTCAGCCTCAGGATG...GGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR-3UTR CAA 90 bp | GGCCCCAGAGTAGGTGTGCAGCAGTCAGCCGGGCCTGTCTCAGTGCATTGTGAGATCACCACAACCTTGTaGCGTGCACAAATCAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GPRVGVQQSAGPVSVHCEITTTL*RAQIKR Trigger: CCTCTTGATTTGTGCACGCAACAAGGTTGTGGTGAT...CTCACAATGCACTGAGACAGGCCCGGCTGACTGCTGCACACCTACTCTGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGGGTCATGGTGCAGGAAGGCCTCTTAGAAGGTGCTCCCCTCAGTTCCCACATCACCACAACCTTGTaGCGTGCACAAATCAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GRVMVQEGLLEGAPLSSHITTTL*RAQIKR Trigger: CCTCTTGATTTGTGCACGCAACAAGGTTGTGGTGAT...GTGGGAACTGAGGGGAGCACCTTCTAAGAGGCCTTCCTGCACCATGACCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR CAA 90 bp | CACAGGTCGCACACAGGTGGACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGCAAGGTTACATCCATTaGCTAAAGATGCTGAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HRSHTGGLSEGSPLPSRTQGYIH*LKMLSR Trigger: CCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTG...CGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTCCACCTGTGTGCGACCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR GCA 72 bp | AGGCAGGGTCATGGTGCAGGAAGGCCTCTTAGAAGGTaGTCCCCTCAGTTCCCACAAAGAAATGCAGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: RQGHGAGRPLRR*SPQFPQRNADK Trigger: CTTGTCTGCATTTCTTTGTGGGAACTGAGGGGAGCACCTTCTAAGAGGCCTTCCTGCACCATGACCCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR CCA 72 bp | CACTGGGTAGGAAGGGACCAGGAGGGCACAGCCTCCTaGCTACAAGGTTACATCCATTTGCTAAAGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HWVGRDQEGTAS*LQGYIHLLKML Trigger: CAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCCTCCTGGTCCCTTCCTACCCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR CCA 72 bp | GAACAGCAGAAGAGATGGGAATGGCTCTGGGCTCTGTaGATGGACTCTGGCCTTGAGCTGAAGGAAAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: EQQKRWEWLWAL*MDSGLELKERK Trigger: CTTTCTTTCCTTCAGCTCAAGGCCAGAGTCCATCCACAGAGCCCAGAGCCATTCCCATCTCTTCTGCTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR CAA 90 bp | GACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTGATCAAACACAACCAAAACATCCTGAGGCTGACTaGAGCCCTCAGACAAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: DSVRGPHFQAERDQTQPKHPEAD*SPQTKG Trigger: TCCTTTTGTCTGAGGGCTCAAGTCAGCCTCAGGATG...TTTTGGTTGTGTTTGATCACGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTGGTATCTGCTGAACGGTTGGTaGGTCTGCAGAGAACACTGG | + |
|
Preference number: 3 (lower is better) Translates to: WLQGYIHLLKMLSRALWYLLNGW*VCREHW Trigger: CCAGTGTTCTCTGCAGACCAACCAACCGTTCAGCAG...ATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR GCA 72 bp | GTCACAAAAACACAGCATCAATCACCACAACCTTGTTaGGTGCACAAATCAAGAGGGGAGAGCTGTCCCACG | + |
|
Preference number: 3 (lower is better) Translates to: VTKTQHQSPQPC*VHKSRGESCPT Trigger: CGTGGGACAGCTCTCCCCTCTTGATTTGTGCACGCAACAAGGTTGTGGTGATTGATGCTGTGTTTTTGTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR GCA 72 bp | TCTGGTATGCCCTTAGTCACACTGCTAAGGAGTACCTaGCTGGGGATAGAATCTTGGAAATGCTTCTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SGMPLVTLLRST*LGIESWKCFCL Trigger: AAGGCAGAAGCATTTCCAAGATTCTATCCCCAGGCAGGTACTCCTTAGCAGTGTGACTAAGGGCATACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR CCA 72 bp | TACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTaGTATGCCCTTAGTCACACTGCTAAGGAGTACCTG | + |
|
Preference number: 3 (lower is better) Translates to: YIHLLKMLSRAL*YALSHTAKEYL Trigger: CAGGTACTCCTTAGCAGTGTGACTAAGGGCATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTCACAAAAACACAGCATCAATCACCACAACCTTGTTGCGTGCACAAATCACATCCTGAGGCTGACTaGAGCCCTCAGACAAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TVTKTQHQSPQPCCVHKSHPEAD*SPQTKG Trigger: TCCTTTTGTCTGAGGGCTCAAGTCAGCCTCAGGATG...TGATTTGTGCACGCAACAAGGTTGTGGTGATTGATGCTGTGTTTTTGTGACAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR TCA 72 bp | AACCGGAGGATCACGTCTCTGTTGAAACATTCAGAATaGCAGCACTTCGATTTCTTAAGTGCAATGGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NRRITSLLKHSE*QHFDFLSAMGE Trigger: CTCTCCCATTGCACTTAAGAAATCGAAGTGCTGTCATTCTGAATGTTTCAACAGAGACGTGATCCTCCGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGAGACCCCAGGGGCCAAGGGGAATGTaGTGGCAGCGGCGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGQLALSTGSAAHALRPQGPRGM*WQRRRR Trigger: CCGCCGCCGCCGCTGCCACCACATTCCCCTTGGCCC...CTGGGGTCTCAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GAGGACAGGGCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGCTGGCTGTCCCCAGCTaGCGGGAGCGTGCGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: EDRAGQLALSTGSAAHALLAVPS*RERAHS Trigger: CGAGTGCGCACGCTCCCGCCAGCTGGGGACAGCCAG...CAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGCCCTGTCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GGCCCCAGAGTAGGTGTGCAGCAGTCAGCCGGGCCTGTCTCAGTGCATTGTGAGCCAAGGGGAATGTGGTaGCAGCGGCGGCGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRVGVQQSAGPVSVHCEPRGMW*QRRRRR Trigger: CCGCCGCCGCCGCCGCTGCCACCACATTCCCCTTGG...CTCACAATGCACTGAGACAGGCCCGGCTGACTGCTGCACACCTACTCTGGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | CGGCCAAAACATCTGCAGACGGCTCTGAGGGCACCATGCTCAGGCCGTCAGCTGCTGGCTGTCCCCAGCTaGCGGGAGCGTGCGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: RPKHLQTALRAPCSGRQLLAVPS*RERAHS Trigger: CGAGTGCGCACGCTCCCGCCAGCTGGGGACAGCCAG...CAGCTGACGGCCTGAGCATGGTGCCCTCAGAGCCGTCTGCAGATGTTTTGGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GGCCCCAGAGTAGGTGTGCAGCAGTCAGCCGGGCCTGTCTCAGTGCATTGTGAGCTGGCTGTCCCCAGCTaGCGGGAGCGTGCGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: GPRVGVQQSAGPVSVHCELAVPS*RERAHS Trigger: CGAGTGCGCACGCTCCCGCCAGCTGGGGACAGCCAG...CTCACAATGCACTGAGACAGGCCCGGCTGACTGCTGCACACCTACTCTGGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | CACAGGTCGCACACAGGTGGACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGCCAAGGGGAATGTGGTaGCAGCGGCGGCGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HRSHTGGLSEGSPLPSRTPRGMW*QRRRRR Trigger: CCGCCGCCGCCGCCGCTGCCACCACATTCCCCTTGG...CGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTCCACCTGTGTGCGACCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | GAAGCCAGGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCGCGCACTCGCGGCTGTaGGGTGGGGCCGTCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EARGRSPRLRAVVTLLCIAHSRL*GGAVLG Trigger: TCCAAGGACGGCCCCACCTCACAGCCGCGAGTGCGC...GATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCCTGGCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | GCTGAACGGTTGGTTGGTCTGCAGAGAACACTGGGTCTCAGGGAGCCAGCCCACGCGCACTCGCGGCTGTaGGGTGGGGCCGTCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AERLVGLQRTLGLREPAHAHSRL*GGAVLG Trigger: TCCAAGGACGGCCCCACCTCACAGCCGCGAGTGCGC...GTGGGCTGGCTCCCTGAGACCCAGTGTTCTCTGCAGACCAACCAACCGTTCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GAGGACAGGGCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGAGAGGGACTGGCGGCTaGTGGCCTGCGAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EDRAGQLALSTGSAAHALRGTGG*WPARAF Trigger: GAAAGCCCTCGCAGGCCAGCAGCCGCCAGTCCCTCT...CAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGCCCTGTCCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGAGACCCCAGAGAGGGACTGGCGGCTaGTGGCCTGCGAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGQLALSTGSAAHALRPQRGTGG*WPARAF Trigger: GAAAGCCCTCGCAGGCCAGCAGCCGCCAGTCCCTCT...CTGGGGTCTCAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | GAAGCCAGGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCAGTCGATCTGCTGGTTaGGCGGGCAGCCCCGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EARGRSPRLRAVVTLLCISRSAG*AGSPAG Trigger: GCCTGCGGGGCTGCCCGCTCAACCAGCAGATCGACT...GATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCCTGGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GAAGCCAGGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCGGGCTGTCCGCCGAGTaGACAGGGCGTAGGTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: EARGRSPRLRAVVTLLCIGLSAE*TGRRCA Trigger: TGCGCACCTACGCCCTGTGCACTCGGCGGACAGCCC...GATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCCTGGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | CGGCCAAAACATCTGCAGACGGCTCTGAGGGCACCATGCTCAGGCCGTCAGCTGTGGCGGCTGCTGGCCTaGGAGGGCTTTCAGCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPKHLQTALRAPCSGRQLWRLLA*EGFQRW Trigger: CCAACGCTGAAAGCCCTCGCAGGCCAGCAGCCGCCA...CAGCTGACGGCCTGAGCATGGTGCCCTCAGAGCCGTCTGCAGATGTTTTGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GCTGAACGGTTGGTTGGTCTGCAGAGAACACTGGGTCTCAGGGAGCCAGCCCACCTATCCGAGCGCTCCTaGCTGTCCCCAGCTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AERLVGLQRTLGLREPAHLSERS*LSPAGG Trigger: CCCGCCAGCTGGGGACAGCCAGGAGCGCTCGGATAG...GTGGGCTGGCTCCCTGAGACCCAGTGTTCTCTGCAGACCAACCAACCGTTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCCAGGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCCTATCCGAGCGCTCCTaGCTGTCCCCAGCTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EARGRSPRLRAVVTLLCILSERS*LSPAGG Trigger: CCCGCCAGCTGGGGACAGCCAGGAGCGCTCGGATAG...GATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCCTGGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCCAGGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCGGCGGCCACGGCTCCTaGCAGCTCCCGAGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EARGRSPRLRAVVTLLCIGGHGS*QLPSPF Trigger: GAAAGGACTCGGGAGCTGCCAGGAGCCGTGGCCGCC...GATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCCTGGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GTAGCTGCTGACCAGCAGCAGGGGAAGTCTAGGAGACAAGTGAAAGGGCAGAGGCCAAGGGGAATGTGGTaGCAGCGGCGGCGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VAADQQQGKSRRQVKGQRPRGMW*QRRRRR Trigger: CCGCCGCCGCCGCCGCTGCCACCACATTCCCCTTGG...CCTCTGCCCTTTCACTTGTCTCCTAGACTTCCCCTGCTGCTGGTCAGCAGCTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | GAAGCCAGGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCCCACAATCCCAGGGCTaGACGTCCTGCCCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EARGRSPRLRAVVTLLCIPQSQG*TSCPSP Trigger: GGGAGAGGGGCAGGACGTTCAGCCCTGGGATTGTGG...GATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCCTGGCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCCTACCTAGGGCTGTCCGCCGAGTaGACAGGGCGTAGGTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAGAQGSGQSLLSSVSYLGLSAE*TGRRCA Trigger: TGCGCACCTACGCCCTGTGCACTCGGCGGACAGCCC...TAGGTAGGATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACGCCTGGATCTCCACGTaGTGGCCCGACACCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DARDSPCVALGRKGPGGHAWIST*WPDTFS Trigger: AGAGAAGGTGTCGGGCCAGCACGTGGAGATCCAGGC...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGAGACCCCAGGCCTGGATCTCCACGTaGTGGCCCGACACCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGQLALSTGSAAHALRPQAWIST*WPDTFS Trigger: AGAGAAGGTGTCGGGCCAGCACGTGGAGATCCAGGC...CTGGGGTCTCAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GAAGCCAGGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCAGAGGGACTGGCGGCTaGTGGCCTGCGAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EARGRSPRLRAVVTLLCIRGTGG*WPARAF Trigger: GAAAGCCCTCGCAGGCCAGCAGCCGCCAGTCCCTCT...GATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCCTGGCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCCAGGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCCTCGCGGCTGTGAGGTaGGGCCGTCCTTGGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EARGRSPRLRAVVTLLCILAAVR*GRPWSS Trigger: ACTGCTCCAAGGACGGCCCCACCTCACAGCCGCGAG...GATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCCTGGCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | CACAGGTCGCACACAGGTGGACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGCTCGCGGCTGTGAGGTaGGGCCGTCCTTGGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HRSHTGGLSEGSPLPSRTLAAVR*GRPWSS Trigger: ACTGCTCCAAGGACGGCCCCACCTCACAGCCGCGAG...CGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTCCACCTGTGTGCGACCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACCCGATGTACTTGGCCTaGATCTCCACGTGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DARDSPCVALGRKGPGGHPMYLA*ISTCWP Trigger: GGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGG...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTGCTCTCTCCGGCGGCCACGGCTCCTaGCAGCTCCCGAGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGSHIHTMGVRVEGAALSGGHGS*QLPSPF Trigger: GAAAGGACTCGGGAGCTGCCAGGAGCCGTGGCCGCC...GGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACCCGACACCTTCTCTGTaGTCTTCAGGCTGTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DARDSPCVALGRKGPGGHPTPSL*SSGCWP Trigger: GGGCCAACAGCCTGAAGATCACAGAGAAGGTGTCGG...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | ACAGTGTGCGCGAGAGTGTGTGGGAGGGCACAGGGGCCCCAGAGTAGGTGTGCACCGACACCTTCTCTGTaGTCTTCAGGCTGTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVCARVCGRAQGPQSRCAPTPSL*SSGCWP Trigger: GGGCCAACAGCCTGAAGATCACAGAGAAGGTGTCGG...TGCACACCTACTCTGGGGCCCCTGTGCCCTCCCACACACTCTCGCGCACACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GAAGCCAGGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCGCCTGGAAGTCGATCTaGTGGTTGAGCGGGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EARGRSPRLRAVVTLLCIAWKSI*WLSGQP Trigger: GGGCTGCCCGCTCAACCAGCAGATCGACTTCCAGGC...GATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCCTGGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGTCATGGTGCAGGAAGGCCTCTTAGAAGGTGCTCCCCTCAGTTCCCACGCCTGGAAGTCGATCTaGTGGTTGAGCGGGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRVMVQEGLLEGAPLSSHAWKSI*WLSGQP Trigger: GGGCTGCCCGCTCAACCAGCAGATCGACTTCCAGGC...GTGGGAACTGAGGGGAGCACCTTCTAAGAGGCCTTCCTGCACCATGACCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | CCTCCCAGCTACCCACGTGGTTTTGGCAGGGGTTTGGACCTCTGGGAGGGAGAGAGGTGGGGCCGTCCTTaGAGCAGTTGTGCTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPSYPRGFGRGLDLWEGERWGRP*SSCAGS Trigger: TGAGCCAGCACAACTGCTCCAAGGACGGCCCCACCT...CTCTCCCTCCCAGAGGTCCAAACCCCTGCCAAAACCACGTGGGTAGCTGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACGAAAGTCCTGAGGTGTaGGTCCCCAAAGAGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: DARDSPCVALGRKGPGGHESPEV*VPKEAA Trigger: TGCGGCCTCTTTGGGGACCCACACCTCAGGACTTTC...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTGGCTGTGGCCAGAGAGTTGAAAGAAGGTTCTAGTGGGAGGAGAACCGGGCCAAGGGGAATGTaGTGGCAGCGGCGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLAVARELKEGSSGRRTGPRGM*WQRRRR Trigger: CCGCCGCCGCCGCTGCCACCACATTCCCCTTGGCCC...GGTTCTCCTCCCACTAGAACCTTCTTTCAACTCTCTGGCCACAGCCAGAGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR CAA 72 bp | CGTCAGCTGCGGAGGCCACCTCTGCTGAACGGTTGGTaGGTCTGCAGAGAACACTGGGTCTCAGGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQLRRPPLLNGW*VCREHWVSGSQ Trigger: CTGGCTCCCTGAGACCCAGTGTTCTCTGCAGACCAACCAACCGTTCAGCAGAGGTGGCCTCCGCAGCTGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCTGGCTGTGGCCAGAGAGTTGAAAGAAGGTTCTAGTGGGAGGAGAACCGCGCACTCGCGGCTGTaGGGTGGGGCCGTCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLAVARELKEGSSGRRTAHSRL*GGAVLG Trigger: TCCAAGGACGGCCCCACCTCACAGCCGCGAGTGCGC...GGTTCTCCTCCCACTAGAACCTTCTTTCAACTCTCTGGCCACAGCCAGAGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | GGGCTCTCTGGTATGCCCTTAGTCACACTGCTAAGGAGTACCTGCCTGGGGATAAGTCGATCTGCTGGTTaGGCGGGCAGCCCCGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLSGMPLVTLLRSTCLGISRSAG*AGSPAG Trigger: GCCTGCGGGGCTGCCCGCTCAACCAGCAGATCGACT...TATCCCCAGGCAGGTACTCCTTAGCAGTGTGACTAAGGGCATACCAGAGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | GAGGACAGGGCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGAGTAGGCAGCCAGCGTaGAGTTCACATCACCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: EDRAGQLALSTGSAAHALSRQPA*SSHHQS Trigger: CGACTGGTGATGTGAACTTCACGCTGGCTGCCTACT...CAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGCCCTGTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACAGTAGGCAGCCAGCGTaGAGTTCACATCACCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: DARDSPCVALGRKGPGGHSRQPA*SSHHQS Trigger: CGACTGGTGATGTGAACTTCACGCTGGCTGCCTACT...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTCTGGTATGCCCTTAGTCACACTGCTAAGGAGTACCTGCCTGGGGATATCGGAGGCAGGGGCGTaGCTGCCTGATGACGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLSGMPLVTLLRSTCLGISEAGA*LPDDVA Trigger: CGCCACGTCATCAGGCAGCCACGCCCCTGCCTCCGA...TATCCCCAGGCAGGTACTCCTTAGCAGTGTGACTAAGGGCATACCAGAGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGTCATGGTGCAGGAAGGCCTCTTAGAAGGTGCTCCCCTCAGTTCCCACAGGTGGGGCCGTCCTTaGAGCAGTTGTGCTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRVMVQEGLLEGAPLSSHRWGRP*SSCAGS Trigger: TGAGCCAGCACAACTGCTCCAAGGACGGCCCCACCT...GTGGGAACTGAGGGGAGCACCTTCTAAGAGGCCTTCCTGCACCATGACCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTCTGGTATGCCCTTAGTCACACTGCTAAGGAGTACCTGCCTGGGGATACTATCCGAGCGCTCCTaGCTGTCCCCAGCTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLSGMPLVTLLRSTCLGILSERS*LSPAGG Trigger: CCCGCCAGCTGGGGACAGCCAGGAGCGCTCGGATAG...TATCCCCAGGCAGGTACTCCTTAGCAGTGTGACTAAGGGCATACCAGAGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GGCCCCAGAGTAGGTGTGCAGCAGTCAGCCGGGCCTGTCTCAGTGCATTGTGAGGAAAGTCCTGAGGTGTaGGTCCCCAAAGAGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPRVGVQQSAGPVSVHCEESPEV*VPKEAA Trigger: TGCGGCCTCTTTGGGGACCCACACCTCAGGACTTTC...CTCACAATGCACTGAGACAGGCCCGGCTGACTGCTGCACACCTACTCTGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | CGGCCAAAACATCTGCAGACGGCTCTGAGGGCACCATGCTCAGGCCGTCAGCTGCCTGTCGCACCACGATaGTGGTGCCGATGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPKHLQTALRAPCSGRQLPVAPR*WCRCTW Trigger: CCAAGTACATCGGCACCACCATCGTGGTGCGACAGG...CAGCTGACGGCCTGAGCATGGTGCCCTCAGAGCCGTCTGCAGATGTTTTGGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACGGACCAGAAGTGGGATaGTGCCAAGGAGAATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DARDSPCVALGRKGPGGHGPEVG*CQGESG Trigger: CCCAGATTCTCCTTGGCACCATCCCACTTCTGGTCC...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | GCTGAACGGTTGGTTGGTCTGCAGAGAACACTGGGTCTCAGGGAGCCAGCCCACCCGACACCTTCTCTGTaGTCTTCAGGCTGTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AERLVGLQRTLGLREPAHPTPSL*SSGCWP Trigger: GGGCCAACAGCCTGAAGATCACAGAGAAGGTGTCGG...GTGGGCTGGCTCCCTGAGACCCAGTGTTCTCTGCAGACCAACCAACCGTTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | CACAGGTCGCACACAGGTGGACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGGCACCACGATGGTGGTaGCGATGTACTTGGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRSHTGGLSEGSPLPSRTAPRWW*RCTWPG Trigger: TCCAGGCCAAGTACATCGGCACCACCATCGTGGTGC...CGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTCCACCTGTGTGCGACCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCCAGGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCGAAAGTCCTGAGGTGTaGGTCCCCAAAGAGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: EARGRSPRLRAVVTLLCIESPEV*VPKEAA Trigger: TGCGGCCTCTTTGGGGACCCACACCTCAGGACTTTC...GATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCCTGGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | CACAGGTCGCACACAGGTGGACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTGGATCTCCACGTGCTaGCCCGACACCTTCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HRSHTGGLSEGSPLPSRTWISTC*PDTFSV Trigger: CACAGAGAAGGTGTCGGGCCAGCACGTGGAGATCCA...CGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTCCACCTGTGTGCGACCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCCAGGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCGTCGCACCACGATGGTaGTGCCGATGTACTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EARGRSPRLRAVVTLLCIVAPRW*CRCTWP Trigger: AGGCCAAGTACATCGGCACCACCATCGTGGTGCGAC...GATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCCTGGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | GTAGCTGCTGACCAGCAGCAGGGGAAGTCTAGGAGACAAGTGAAAGGGCAGAGGTGGAAGTCGATCTGCTaGTTGAGCGGGCAGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VAADQQQGKSRRQVKGQRWKSIC*LSGQPR Trigger: GCGGGGCTGCCCGCTCAACCAGCAGATCGACTTCCA...CCTCTGCCCTTTCACTTGTCTCCTAGACTTCCCCTGCTGCTGGTCAGCAGCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | ACAGTGTGCGCGAGAGTGTGTGGGAGGGCACAGGGGCCCCAGAGTAGGTGTGCATTGGCACGGAAAGCCTaGAAGTCGATCTGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TVCARVCGRAQGPQSRCALARKA*KSICWL Trigger: CAACCAGCAGATCGACTTCCAGGCTTTCCGTGCCAA...TGCACACCTACTCTGGGGCCCCTGTGCCCTCCCACACACTCTCGCGCACACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | CCTCCCAGCTACCCACGTGGTTTTGGCAGGGGTTTGGACCTCTGGGAGGGAGAGGGACCAGAAGTGGGATaGTGCCAAGGAGAATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSYPRGFGRGLDLWEGEGPEVG*CQGESG Trigger: CCCAGATTCTCCTTGGCACCATCCCACTTCTGGTCC...CTCTCCCTCCCAGAGGTCCAAACCCCTGCCAAAACCACGTGGGTAGCTGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR TCA 90 bp | GGCCCCAGAGTAGGTGTGCAGCAGTCAGCCGGGCCTGTCTCAGTGCATTGTGAGGGTAATTATTGTCGATaGGAGGCCAGGCGCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPRVGVQQSAGPVSVHCEGNYCR*EARRLA Trigger: TGCAAGGCGCCTGGCCTCTCATCGACAATAATTACC...CTCACAATGCACTGAGACAGGCCCGGCTGACTGCTGCACACCTACTCTGGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR TCA 90 bp | GGGCACAGCCTCCTGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGAGTCGATCTGCTGGTTaGGCGGGCAGCCCCGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GHSLLATRLHPFAKDAEQSRSAG*AGSPAG Trigger: GCCTGCGGGGCTGCCCGCTCAACCAGCAGATCGACT...CTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGTCATGGTGCAGGAAGGCCTCTTAGAAGGTGCTCCCCTCAGTTCCCACTCACATCACCAGTCGTaGGGAGGTCGAAGACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRVMVQEGLLEGAPLSSHSHHQS*GGRRHR Trigger: CCTGTGTCTTCGACCTCCTCACGACTGGTGATGTGA...GTGGGAACTGAGGGGAGCACCTTCTAAGAGGCCTTCCTGCACCATGACCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACTCCTTGGAGCAGTTGTaGTGGCTCATAAGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DARDSPCVALGRKGPGGHSLEQL*WLIRSS Trigger: AGAGGACCTTATGAGCCAGCACAACTGCTCCAAGGA...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GAAGCCAGGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCAGGCGCCTTGCACCTTaGATGTCTGGAAGTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EARGRSPRLRAVVTLLCIRRLAP*MSGSGL Trigger: CAGACCACTTCCAGACATGCAAGGTGCAAGGCGCCT...GATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCCTGGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | CTCTCTCTGGCTGTGGCCAGAGAGTTGAAAGAAGGTTCTAGTGGGAGGAGAACCTGGCGGCTGCTGGCCTaGGAGGGCTTTCAGCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLAVARELKEGSSGRRTWRLLA*EGFQRW Trigger: CCAACGCTGAAAGCCCTCGCAGGCCAGCAGCCGCCA...GGTTCTCCTCCCACTAGAACCTTCTTTCAACTCTCTGGCCACAGCCAGAGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCCTACCTACGGGCAGCTTCTCTTTaGACTTGGCCACGGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGAQGSGQSLLSSVSYLRAASL*TWPRLS Trigger: AGACAGCCGTGGCCAAGTGCAAAGAGAAGCTGCCCG...TAGGTAGGATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTGCTCTCTCCGGCTGCCTGATGACGTaGCGCTCCAGAACTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGSHIHTMGVRVEGAALSGCLMT*RSRTQS Trigger: ACTCTGAGTTCTGGAGCGCCACGTCATCAGGCAGCC...GGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTGCTCTCTCCTGGATCTCCACGTGCTaGCCCGACACCTTCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGSHIHTMGVRVEGAALSWISTC*PDTFSV Trigger: CACAGAGAAGGTGTCGGGCCAGCACGTGGAGATCCA...GGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | GGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCCTACCTACCTGTCGCACCACGATaGTGGTGCCGATGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GAGAQGSGQSLLSSVSYLPVAPR*WCRCTW Trigger: CCAAGTACATCGGCACCACCATCGTGGTGCGACAGG...TAGGTAGGATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACGCAGCTTGTCCTTGTTaGAGTGGAGCATCTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DARDSPCVALGRKGPGGHAACPC*SGASCH Trigger: ATGGCAAGATGCTCCACTCCAACAAGGACAAGCTGC...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GGGCACAGCCTCCTGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCGGCCACGGCTCCTaGCAGCTCCCGAGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GHSLLATRLHPFAKDAEQGGHGS*QLPSPF Trigger: GAAAGGACTCGGGAGCTGCCAGGAGCCGTGGCCGCC...CTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | TCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTGCTCTCTCCGTGCCAAGGAGAATCTaGGGGGCCAAGGGGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGSHIHTMGVRVEGAALSVPRRI*GAKGNV Trigger: CACATTCCCCTTGGCCCCCCAGATTCTCCTTGGCAC...GGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | GGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCCTACCTAGTGCCAAGGAGAATCTaGGGGGCCAAGGGGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: GAGAQGSGQSLLSSVSYLVPRRI*GAKGNV Trigger: CACATTCCCCTTGGCCCCCCAGATTCTCCTTGGCAC...TAGGTAGGATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | CCTCCCAGCTACCCACGTGGTTTTGGCAGGGGTTTGGACCTCTGGGAGGGAGAGCAGGAGGACCAGAAGTaGGATGGTGCCAAGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PPSYPRGFGRGLDLWEGEQEDQK*DGAKEN Trigger: ATTCTCCTTGGCACCATCCCACTTCTGGTCCTCCTG...CTCTCCCTCCCAGAGGTCCAAACCCCTGCCAAAACCACGTGGGTAGCTGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | CACAGGTCGCACACAGGTGGACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGGGTAATTATTGTCGATaGGAGGCCAGGCGCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HRSHTGGLSEGSPLPSRTGNYCR*EARRLA Trigger: TGCAAGGCGCCTGGCCTCTCATCGACAATAATTACC...CGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTCCACCTGTGTGCGACCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR TCA 90 bp | GCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGAGACCCCAGGCACAGGTGTATTGGTaGCTTGCACGTTCAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGQLALSTGSAAHALRPQAQVYW*LARSGN Trigger: ATTACCTGAACGTGCAAGTCACCAATACACCTGTGC...CTGGGGTCTCAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR TCA 90 bp | GGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCCTACCTATCACATCACCAGTCGTaGGGAGGTCGAAGACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GAGAQGSGQSLLSSVSYLSHHQS*GGRRHR Trigger: CCTGTGTCTTCGACCTCCTCACGACTGGTGATGTGA...TAGGTAGGATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR GCA 90 bp | GTAGCTGCTGACCAGCAGCAGGGGAAGTCTAGGAGACAAGTGAAAGGGCAGAGGAGAGGCCAGGCGCCTTaGACCTTGCATGTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAADQQQGKSRRQVKGQRRGQAP*TLHVWK Trigger: CTTCCAGACATGCAAGGTGCAAGGCGCCTGGCCTCT...CCTCTGCCCTTTCACTTGTCTCCTAGACTTCCCCTGCTGCTGGTCAGCAGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR GCA 90 bp | GGGCACAGCCTCCTGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGTGGCGGCTGCTGGCCTaGGAGGGCTTTCAGCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GHSLLATRLHPFAKDAEQWRLLA*EGFQRW Trigger: CCAACGCTGAAAGCCCTCGCAGGCCAGCAGCCGCCA...CTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | GGGCTCTCTGGTATGCCCTTAGTCACACTGCTAAGGAGTACCTGCCTGGGGATACCGATGTACTTGGCCTaGATCTCCACGTGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLSGMPLVTLLRSTCLGIPMYLA*ISTCWP Trigger: GGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGG...TATCCCCAGGCAGGTACTCCTTAGCAGTGTGACTAAGGGCATACCAGAGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | TCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTGCTCTCTCCTGGTGCCGATGTACTTaGCCTGGATCTCCACGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGSHIHTMGVRVEGAALSWCRCT*PGSPRA Trigger: AGCACGTGGAGATCCAGGCCAAGTACATCGGCACCA...GGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | GGCCCCAGAGTAGGTGTGCAGCAGTCAGCCGGGCCTGTCTCAGTGCATTGTGAGGCAGCTTGTCCTTGTTaGAGTGGAGCATCTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPRVGVQQSAGPVSVHCEAACPC*SGASCH Trigger: ATGGCAAGATGCTCCACTCCAACAAGGACAAGCTGC...CTCACAATGCACTGAGACAGGCCCGGCTGACTGCTGCACACCTACTCTGGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| 3UTR CAA 72 bp | CCAGTGACAGGCCTCTCTCTGGCTGTGGCCAGAGAGTaGAAAGAAGGTTCTAGTGGGAGGAGAACCCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVTGLSLAVARE*KEGSSGRRTRQ Trigger: CTGGCGGGTTCTCCTCCCACTAGAACCTTCTTTCAACTCTCTGGCCACAGCCAGAGAGAGGCCTGTCACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR GCA 90 bp | GGCCCCAGAGTAGGTGTGCAGCAGTCAGCCGGGCCTGTCTCAGTGCATTGTGAGTGGAGTGGAGCATCTTaGCATCCTCCAAAGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPRVGVQQSAGPVSVHCEWSGAS*HPPKHS Trigger: ACTATGCTTTGGAGGATGGCAAGATGCTCCACTCCA...CTCACAATGCACTGAGACAGGCCCGGCTGACTGCTGCACACCTACTCTGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | GACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTGATCAAACACAACCAAAACTCGCGGCTGTGAGGTaGGGCCGTCCTTGGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DSVRGPHFQAERDQTQPKLAAVR*GRPWSS Trigger: ACTGCTCCAAGGACGGCCCCACCTCACAGCCGCGAG...TTTTGGTTGTGTTTGATCACGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | CGGCCAAAACATCTGCAGACGGCTCTGAGGGCACCATGCTCAGGCCGTCAGCTGTTGCATGTCTGGAAGTaGTCTGTGAAAGTCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPKHLQTALRAPCSGRQLLHVWK*SVKVLR Trigger: CCTCAGGACTTTCACAGACCACTTCCAGACATGCAA...CAGCTGACGGCCTGAGCATGGTGCCCTCAGAGCCGTCTGCAGATGTTTTGGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | CGGCCAAAACATCTGCAGACGGCTCTGAGGGCACCATGCTCAGGCCGTCAGCTGTGCACCTTGCATGTCTaGAAGTGGTCTGTGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPKHLQTALRAPCSGRQLCTLHV*KWSVKV Trigger: GACTTTCACAGACCACTTCCAGACATGCAAGGTGCA...CAGCTGACGGCCTGAGCATGGTGCCCTCAGAGCCGTCTGCAGATGTTTTGGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | CCTCTTAGAAGGTGCTCCCCTCAGTTCCCACAAAGAAATGCAGACAAGAGGGCTTGGAAGTCGATCTGCTaGTTGAGCGGGCAGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLRRCSPQFPQRNADKRAWKSIC*LSGQPR Trigger: GCGGGGCTGCCCGCTCAACCAGCAGATCGACTTCCA...AGCCCTCTTGTCTGCATTTCTTTGTGGGAACTGAGGGGAGCACCTTCTAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | GGGCACAGCCTCCTGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGTGGAAGTCGATCTGCTaGTTGAGCGGGCAGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GHSLLATRLHPFAKDAEQWKSIC*LSGQPR Trigger: GCGGGGCTGCCCGCTCAACCAGCAGATCGACTTCCA...CTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | GGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCCTACCTATTGGCACGGAAAGCCTaGAAGTCGATCTGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GAGAQGSGQSLLSSVSYLLARKA*KSICWL Trigger: CAACCAGCAGATCGACTTCCAGGCTTTCCGTGCCAA...TAGGTAGGATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTGCTCTCTCCGCTTCTCTTTGCACTTaGCCACGGCTGTCTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGSHIHTMGVRVEGAALSASLCT*PRLSHR Trigger: CCTATGAGACAGCCGTGGCCAAGTGCAAAGAGAAGC...GGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTCTGGTATGCCCTTAGTCACACTGCTAAGGAGTACCTGCCTGGGGATAGTGCCAAGGAGAATCTaGGGGGCCAAGGGGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLSGMPLVTLLRSTCLGIVPRRI*GAKGNV Trigger: CACATTCCCCTTGGCCCCCCAGATTCTCCTTGGCAC...TATCCCCAGGCAGGTACTCCTTAGCAGTGTGACTAAGGGCATACCAGAGAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | GAAGCCAGGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCGCACAGGTGTATTGGTaGCTTGCACGTTCAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EARGRSPRLRAVVTLLCIAQVYW*LARSGN Trigger: ATTACCTGAACGTGCAAGTCACCAATACACCTGTGC...GATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCCTGGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | GGGCTCTCTGGTATGCCCTTAGTCACACTGCTAAGGAGTACCTGCCTGGGGATATCACATCACCAGTCGTaGGGAGGTCGAAGACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLSGMPLVTLLRSTCLGISHHQS*GGRRHR Trigger: CCTGTGTCTTCGACCTCCTCACGACTGGTGATGTGA...TATCCCCAGGCAGGTACTCCTTAGCAGTGTGACTAAGGGCATACCAGAGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GCTGAACGGTTGGTTGGTCTGCAGAGAACACTGGGTCTCAGGGAGCCAGCCCACTGGAGTGGAGCATCTTaGCATCCTCCAAAGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: AERLVGLQRTLGLREPAHWSGAS*HPPKHS Trigger: ACTATGCTTTGGAGGATGGCAAGATGCTCCACTCCA...GTGGGCTGGCTCCCTGAGACCCAGTGTTCTCTGCAGACCAACCAACCGTTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GGCCCCAGAGTAGGTGTGCAGCAGTCAGCCGGGCCTGTCTCAGTGCATTGTGAGGTCCTTTCAAACAGATaGAGCTTGTCCTTGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPRVGVQQSAGPVSVHCEVLSNR*SLSLLE Trigger: CTCCAACAAGGACAAGCTGCATCTGTTTGAAAGGAC...CTCACAATGCACTGAGACAGGCCCGGCTGACTGCTGCACACCTACTCTGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GGGCACAGCCTCCTGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGCCGATGTACTTGGCCTaGATCTCCACGTGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GHSLLATRLHPFAKDAEQPMYLA*ISTCWP Trigger: GGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGG...CTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GTAGCTGCTGACCAGCAGCAGGGGAAGTCTAGGAGACAAGTGAAAGGGCAGAGGCAGGAGGACCAGAAGTaGGATGGTGCCAAGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VAADQQQGKSRRQVKGQRQEDQK*DGAKEN Trigger: ATTCTCCTTGGCACCATCCCACTTCTGGTCCTCCTG...CCTCTGCCCTTTCACTTGTCTCCTAGACTTCCCCTGCTGCTGGTCAGCAGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | TGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTGGTATCCACAATCCCAGGGCTaGACGTCCTGCCCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WLQGYIHLLKMLSRALWYPQSQG*TSCPSP Trigger: GGGAGAGGGGCAGGACGTTCAGCCCTGGGATTGTGG...ATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GTAGCTGCTGACCAGCAGCAGGGGAAGTCTAGGAGACAAGTGAAAGGGCAGAGGTTGGGGGCAGCTGAGTaGTTGTGGAAACTCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VAADQQQGKSRRQVKGQRLGAAE*LWKLFS Trigger: TGAGAAGAGTTTCCACAAGCACTCAGCTGCCCCCAA...CCTCTGCCCTTTCACTTGTCTCCTAGACTTCCCCTGCTGCTGGTCAGCAGCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GGGCACAGCCTCCTGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGCACCACGATGGTGGTaGCGATGTACTTGGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHSLLATRLHPFAKDAEQAPRWW*RCTWPG Trigger: TCCAGGCCAAGTACATCGGCACCACCATCGTGGTGC...CTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GGGCACAGCCTCCTGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGCGGGCAGCTTCTCTTTaGACTTGGCCACGGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHSLLATRLHPFAKDAEQRAASL*TWPRLS Trigger: AGACAGCCGTGGCCAAGTGCAAAGAGAAGCTGCCCG...CTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | TCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTGCTCTCTCCTGGAGTGGAGCATCTTaGCATCCTCCAAAGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGSHIHTMGVRVEGAALSWSGAS*HPPKHS Trigger: ACTATGCTTTGGAGGATGGCAAGATGCTCCACTCCA...GGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GCTGAACGGTTGGTTGGTCTGCAGAGAACACTGGGTCTCAGGGAGCCAGCCCACGTCCTTTCAAACAGATaGAGCTTGTCCTTGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AERLVGLQRTLGLREPAHVLSNR*SLSLLE Trigger: CTCCAACAAGGACAAGCTGCATCTGTTTGAAAGGAC...GTGGGCTGGCTCCCTGAGACCCAGTGTTCTCTGCAGACCAACCAACCGTTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR CAA 72 bp | GAGGGCACAGCCTCCTGGCTACAAGGTTACATCCATTaGCTAAAGATGCTGAGCAGGGCTCTCTGGTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: EGTASWLQGYIH*LKMLSRALWYA Trigger: GGCATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCTGGCTGTGGCCAGAGAGTTGAAAGAAGGTTCTAGTGGGAGGAGAACCGGTAATTATTGTCGATaGGAGGCCAGGCGCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLAVARELKEGSSGRRTGNYCR*EARRLA Trigger: TGCAAGGCGCCTGGCCTCTCATCGACAATAATTACC...GGTTCTCCTCCCACTAGAACCTTCTTTCAACTCTCTGGCCACAGCCAGAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GGAGGGCACAGCCTCCTGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGAGGCGCCTTGCACCTTaGATGTCTGGAAGTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGHSLLATRLHPFAKDAERRLAP*MSGSGL Trigger: CAGACCACTTCCAGACATGCAAGGTGCAAGGCGCCT...CTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTGATCAAACACAACCAAAAAGAGGCCAGGCGCCTTaGACCTTGCATGTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSVRGPHFQAERDQTQPKRGQAP*TLHVWK Trigger: CTTCCAGACATGCAAGGTGCAAGGCGCCTGGCCTCT...TTTTGGTTGTGTTTGATCACGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | TGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTGGTATGCCTGGAAGTCGATCTaGTGGTTGAGCGGGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: WLQGYIHLLKMLSRALWYAWKSI*WLSGQP Trigger: GGGCTGCCCGCTCAACCAGCAGATCGACTTCCAGGC...ATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | ACTGTCACAAAAACACAGCATCAATCACCACAACCTTGTTGCGTGCACAAATCATCGGAGGCAGGGGCGTaGCTGCCTGATGACGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TVTKTQHQSPQPCCVHKSSEAGA*LPDDVA Trigger: CGCCACGTCATCAGGCAGCCACGCCCCTGCCTCCGA...TGATTTGTGCACGCAACAAGGTTGTGGTGATTGATGCTGTGTTTTTGTGACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GTAGCTGCTGACCAGCAGCAGGGGAAGTCTAGGAGACAAGTGAAAGGGCAGAGGTGCACCTTGCATGTCTaGAAGTGGTCTGTGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VAADQQQGKSRRQVKGQRCTLHV*KWSVKV Trigger: GACTTTCACAGACCACTTCCAGACATGCAAGGTGCA...CCTCTGCCCTTTCACTTGTCTCCTAGACTTCCCCTGCTGCTGGTCAGCAGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | CACAGGTCGCACACAGGTGGACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTGGTCCACACACTCTTaGAAGTTCTTGAAGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: HRSHTGGLSEGSPLPSRTWSTHS*KFLKMM Trigger: CATCATCTTCAAGAACTTCCAAGAGTGTGTGGACCA...CGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTCCACCTGTGTGCGACCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GCTGAACGGTTGGTTGGTCTGCAGAGAACACTGGGTCTCAGGGAGCCAGCCCACTGGTCCACACACTCTTaGAAGTTCTTGAAGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: AERLVGLQRTLGLREPAHWSTHS*KFLKMM Trigger: CATCATCTTCAAGAACTTCCAAGAGTGTGTGGACCA...GTGGGCTGGCTCCCTGAGACCCAGTGTTCTCTGCAGACCAACCAACCGTTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTGATCAAACACAACCAAAATGGATCTCCACGTGCTaGCCCGACACCTTCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSVRGPHFQAERDQTQPKWISTC*PDTFSV Trigger: CACAGAGAAGGTGTCGGGCCAGCACGTGGAGATCCA...TTTTGGTTGTGTTTGATCACGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTGGCTGTGGCCAGAGAGTTGAAAGAAGGTTCTAGTGGGAGGAGAACCTTGGCACGGAAAGCCTaGAAGTCGATCTGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLAVARELKEGSSGRRTLARKA*KSICWL Trigger: CAACCAGCAGATCGACTTCCAGGCTTTCCGTGCCAA...GGTTCTCCTCCCACTAGAACCTTCTTTCAACTCTCTGGCCACAGCCAGAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTGGCTGTGGCCAGAGAGTTGAAAGAAGGTTCTAGTGGGAGGAGAACCGCTTCTCTTTGCACTTaGCCACGGCTGTCTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLAVARELKEGSSGRRTASLCT*PRLSHR Trigger: CCTATGAGACAGCCGTGGCCAAGTGCAAAGAGAAGC...GGTTCTCCTCCCACTAGAACCTTCTTTCAACTCTCTGGCCACAGCCAGAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | GGGCTCTCTGGTATGCCCTTAGTCACACTGCTAAGGAGTACCTGCCTGGGGATAGCACAGGTGTATTGGTaGCTTGCACGTTCAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLSGMPLVTLLRSTCLGIAQVYW*LARSGN Trigger: ATTACCTGAACGTGCAAGTCACCAATACACCTGTGC...TATCCCCAGGCAGGTACTCCTTAGCAGTGTGACTAAGGGCATACCAGAGAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTGCTCTCTCCTGGTCCACACACTCTTaGAAGTTCTTGAAGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: SGSHIHTMGVRVEGAALSWSTHS*KFLKMM Trigger: CATCATCTTCAAGAACTTCCAAGAGTGTGTGGACCA...GGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | CCTCTTAGAAGGTGCTCCCCTCAGTTCCCACAAAGAAATGCAGACAAGAGGGCTGCTTCTCTTTGCACTTaGCCACGGCTGTCTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLRRCSPQFPQRNADKRAASLCT*PRLSHR Trigger: CCTATGAGACAGCCGTGGCCAAGTGCAAAGAGAAGC...AGCCCTCTTGTCTGCATTTCTTTGTGGGAACTGAGGGGAGCACCTTCTAAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | CCTCTTAGAAGGTGCTCCCCTCAGTTCCCACAAAGAAATGCAGACAAGAGGGCTTCCTTGGAGCAGTTGTaGTGGCTCATAAGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLRRCSPQFPQRNADKRASLEQL*WLIRSS Trigger: AGAGGACCTTATGAGCCAGCACAACTGCTCCAAGGA...AGCCCTCTTGTCTGCATTTCTTTGTGGGAACTGAGGGGAGCACCTTCTAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | TGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTGGTATAGAGGCCAGGCGCCTTaGACCTTGCATGTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WLQGYIHLLKMLSRALWYRGQAP*TLHVWK Trigger: CTTCCAGACATGCAAGGTGCAAGGCGCCTGGCCTCT...ATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTGGCTGTGGCCAGAGAGTTGAAAGAAGGTTCTAGTGGGAGGAGAACCTTGCATGTCTGGAAGTaGTCTGTGAAAGTCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLAVARELKEGSSGRRTLHVWK*SVKVLR Trigger: CCTCAGGACTTTCACAGACCACTTCCAGACATGCAA...GGTTCTCCTCCCACTAGAACCTTCTTTCAACTCTCTGGCCACAGCCAGAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | TGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTGGTATGTCGCACCACGATGGTaGTGCCGATGTACTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WLQGYIHLLKMLSRALWYVAPRW*CRCTWP Trigger: AGGCCAAGTACATCGGCACCACCATCGTGGTGCGAC...ATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS-3UTR CCA 90 bp | GACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTGATCAAACACAACCAAAACAGGAGGACCAGAAGTaGGATGGTGCCAAGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: DSVRGPHFQAERDQTQPKQEDQK*DGAKEN Trigger: ATTCTCCTTGGCACCATCCCACTTCTGGTCCTCCTG...TTTTGGTTGTGTTTGATCACGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR TCA 90 bp | TGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTGGTATAGTAGGCAGCCAGCGTaGAGTTCACATCACCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: WLQGYIHLLKMLSRALWYSRQPA*SSHHQS Trigger: CGACTGGTGATGTGAACTTCACGCTGGCTGCCTACT...ATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | GGGCACAGCCTCCTGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGTGCACCTTGCATGTCTaGAAGTGGTCTGTGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GHSLLATRLHPFAKDAEQCTLHV*KWSVKV Trigger: GACTTTCACAGACCACTTCCAGACATGCAAGGTGCA...CTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTGGTATTGGTGCCGATGTACTTaGCCTGGATCTCCACGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WLQGYIHLLKMLSRALWYWCRCT*PGSPRA Trigger: AGCACGTGGAGATCCAGGCCAAGTACATCGGCACCA...ATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR GCA 90 bp | GGAGGGCACAGCCTCCTGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGGTCCTTTCAAACAGATaGAGCTTGTCCTTGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGHSLLATRLHPFAKDAEVLSNR*SLSLLE Trigger: CTCCAACAAGGACAAGCTGCATCTGTTTGAAAGGAC...CTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | ACTGTCACAAAAACACAGCATCAATCACCACAACCTTGTTGCGTGCACAAATCAGTCGCACCACGATGGTaGTGCCGATGTACTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TVTKTQHQSPQPCCVHKSVAPRW*CRCTWP Trigger: AGGCCAAGTACATCGGCACCACCATCGTGGTGCGAC...TGATTTGTGCACGCAACAAGGTTGTGGTGATTGATGCTGTGTTTTTGTGACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | ACTGTCACAAAAACACAGCATCAATCACCACAACCTTGTTGCGTGCACAAATCACCTGTCGCACCACGATaGTGGTGCCGATGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVTKTQHQSPQPCCVHKSPVAPR*WCRCTW Trigger: CCAAGTACATCGGCACCACCATCGTGGTGCGACAGG...TGATTTGTGCACGCAACAAGGTTGTGGTGATTGATGCTGTGTTTTTGTGACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR CAA 72 bp | TGTCACAAAAACACAGCATCAATCACCACAACCTTGTaGCGTGCACAAATCAAGAGGGGAGAGCTGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CHKNTASITTTL*RAQIKRGELSH Trigger: GTGGGACAGCTCTCCCCTCTTGATTTGTGCACGCAACAAGGTTGTGGTGATTGATGCTGTGTTTTTGTGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | ACTGTCACAAAAACACAGCATCAATCACCACAACCTTGTTGCGTGCACAAATCATGGTGCCGATGTACTTaGCCTGGATCTCCACGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVTKTQHQSPQPCCVHKSWCRCT*PGSPRA Trigger: AGCACGTGGAGATCCAGGCCAAGTACATCGGCACCA...TGATTTGTGCACGCAACAAGGTTGTGGTGATTGATGCTGTGTTTTTGTGACAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTGGTATGCAGCTTGTCCTTGTTaGAGTGGAGCATCTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WLQGYIHLLKMLSRALWYAACPC*SGASCH Trigger: ATGGCAAGATGCTCCACTCCAACAAGGACAAGCTGC...ATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | ACTGTCACAAAAACACAGCATCAATCACCACAACCTTGTTGCGTGCACAAATCAGGACCAGAAGTGGGATaGTGCCAAGGAGAATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVTKTQHQSPQPCCVHKSGPEVG*CQGESG Trigger: CCCAGATTCTCCTTGGCACCATCCCACTTCTGGTCC...TGATTTGTGCACGCAACAAGGTTGTGGTGATTGATGCTGTGTTTTTGTGACAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| 3UTR CAA 72 bp | TACTGTCACAAAAACACAGCATCAATCACCACAACCTaGTTGCGTGCACAAATCAAGAGGGGAGAGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YCHKNTASITTT*LRAQIKRGELS Trigger: GGACAGCTCTCCCCTCTTGATTTGTGCACGCAACAAGGTTGTGGTGATTGATGCTGTGTTTTTGTGACAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CCA 90 bp | ACTGTCACAAAAACACAGCATCAATCACCACAACCTTGTTGCGTGCACAAATCATTGCATGTCTGGAAGTaGTCTGTGAAAGTCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVTKTQHQSPQPCCVHKSLHVWK*SVKVLR Trigger: CCTCAGGACTTTCACAGACCACTTCCAGACATGCAA...TGATTTGTGCACGCAACAAGGTTGTGGTGATTGATGCTGTGTTTTTGTGACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS CCA 90 bp | GCGGCTGCTGGCCTGCGAGGGCTTTCAGCGTTGGCACGGAAAGCCTaGAAGTCGATCTGCTGGTTGAGCGGGCAGCCCCGCAGGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAAGLRGLSALARKA*KSICWLSGQPRRQR Trigger: CCTCTGCCTGCGGGGCTGCCCGCTCAACCAGCAGATCGACTTCCAGGCTTTCCGTGCCAACGCTGAAAGCCCTCGCAGGCCAGCAGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS CCA 90 bp | AACACAGGCAGGAGGACCAGAAGTGGGATGGTGCCAAGGAGAATCTaGGGGGCCAAGGGGAATGTGGTGGCAGCGGCGGCGGCGGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NTGRRTRSGMVPRRI*GAKGNVVAAAAAAA Trigger: GGCCGCCGCCGCCGCCGCTGCCACCACATTCCCCTTGGCCCCCCAGATTCTCCTTGGCACCATCCCACTTCTGGTCCTCCTGCCTGTGTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | ACAGTGTGCGCGAGAGTGTGTGGGAGGGCACAGGGGCCCCAGAGTAGGTGTGCAAAGTCGATCTGCTGGTaGAGCGGGCAGCCCCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVCARVCGRAQGPQSRCAKSICW*SGQPRR Trigger: CCTGCGGGGCTGCCCGCTCAACCAGCAGATCGACTT...TGCACACCTACTCTGGGGCCCCTGTGCCCTCCCACACACTCTCGCGCACACTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS GCA 90 bp | GGAATGTCTCGGGGACCACGGGAGAGGGACTGGCGGCTGCTGGCCTaGGAGGGCTTTCAGCGTTGGCACGGAAAGCCTGGAAGTCGATCT | + |
|
Preference number: 5 (lower is better) Translates to: GMSRGPRERDWRLLA*EGFQRWHGKPGSRS Trigger: AGATCGACTTCCAGGCTTTCCGTGCCAACGCTGAAAGCCCTCGCAGGCCAGCAGCCGCCAGTCCCTCTCCCGTGGTCCCCGAGACATTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | CCTCCCAGCTACCCACGTGGTTTTGGCAGGGGTTTGGACCTCTGGGAGGGAGAGGAGGTGGGGCCGTCCTaGGAGCAGTTGTGCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PPSYPRGFGRGLDLWEGEEVGPS*EQLCWL Trigger: GAGCCAGCACAACTGCTCCAAGGACGGCCCCACCTC...CTCTCCCTCCCAGAGGTCCAAACCCCTGCCAAAACCACGTGGGTAGCTGGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | ACAGTGTGCGCGAGAGTGTGTGGGAGGGCACAGGGGCCCCAGAGTAGGTGTGCAGCAGAGGTAGAGGCCTaGGCTGTCACGGTCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TVCARVCGRAQGPQSRCAAEVEA*AVTVLH Trigger: GTGGAGGACCGTGACAGCCAAGGCCTCTACCTCTGC...TGCACACCTACTCTGGGGCCCCTGTGCCCTCCCACACACTCTCGCGCACACTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS TCA 90 bp | GGCTTTCAGCGTTGGCACGGAAAGCCTGGAAGTCGATCTGCTGGTTaGGCGGGCAGCCCCGCAGGCAGAGGTAGAGGCCTTGGCTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GFQRWHGKPGSRSAG*AGSPAGRGRGLGCH Trigger: GTGACAGCCAAGGCCTCTACCTCTGCCTGCGGGGCTGCCCGCTCAACCAGCAGATCGACTTCCAGGCTTTCCGTGCCAACGCTGAAAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GAAGCCAGGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCGAGGTGGGGCCGTCCTaGGAGCAGTTGTGCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EARGRSPRLRAVVTLLCIEVGPS*EQLCWL Trigger: GAGCCAGCACAACTGCTCCAAGGACGGCCCCACCTC...GATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCCTGGCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GAGGACAGGGCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGGAGAGGCCAGGCGCCTaGCACCTTGCATGTCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EDRAGQLALSTGSAAHALERPGA*HLACLE Trigger: TTCCAGACATGCAAGGTGCAAGGCGCCTGGCCTCTC...CAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGCCCTGTCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACGAGAGGCCAGGCGCCTaGCACCTTGCATGTCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DARDSPCVALGRKGPGGHERPGA*HLACLE Trigger: TTCCAGACATGCAAGGTGCAAGGCGCCTGGCCTCTC...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GGCCCCAGAGTAGGTGTGCAGCAGTCAGCCGGGCCTGTCTCAGTGCATTGTGAGGCAGAGGTAGAGGCCTaGGCTGTCACGGTCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GPRVGVQQSAGPVSVHCEAEVEA*AVTVLH Trigger: GTGGAGGACCGTGACAGCCAAGGCCTCTACCTCTGC...CTCACAATGCACTGAGACAGGCCCGGCTGACTGCTGCACACCTACTCTGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACACGGGCAGCTTCTCTTaGCACTTGGCCACGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DARDSPCVALGRKGPGGHTGSFS*HLATAV Trigger: GACAGCCGTGGCCAAGTGCAAAGAGAAGCTGCCCGT...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | ACAGTGTGCGCGAGAGTGTGTGGGAGGGCACAGGGGCCCCAGAGTAGGTGTGCAACGGGCAGCTTCTCTTaGCACTTGGCCACGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TVCARVCGRAQGPQSRCATGSFS*HLATAV Trigger: GACAGCCGTGGCCAAGTGCAAAGAGAAGCTGCCCGT...TGCACACCTACTCTGGGGCCCCTGTGCCCTCCCACACACTCTCGCGCACACTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGAGACCCCAGACGGGCAGCTTCTCTTaGCACTTGGCCACGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AGQLALSTGSAAHALRPQTGSFS*HLATAV Trigger: GACAGCCGTGGCCAAGTGCAAAGAGAAGCTGCCCGT...CTGGGGTCTCAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS CCA 90 bp | CGGCCCACCTGTCGCACCACGATGGTGGTGCCGATGTACTTGGCCTaGATCTCCACGTGCTGGCCCGACACCTTCTCTGTGATCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPTCRTTMVVPMYLA*ISTCWPDTFSVIFR Trigger: CCTGAAGATCACAGAGAAGGTGTCGGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGACAGGTGGGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | CCTCCCAGCTACCCACGTGGTTTTGGCAGGGGTTTGGACCTCTGGGAGGGAGAGCAGGCGCCTTGCACCTaGCATGTCTGGAAGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PPSYPRGFGRGLDLWEGEQAPCT*HVWKWS Trigger: AGACCACTTCCAGACATGCAAGGTGCAAGGCGCCTG...CTCTCCCTCCCAGAGGTCCAAACCCCTGCCAAAACCACGTGGGTAGCTGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACGGCAGCACAGGTGTATaGGTGACTTGCACGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DARDSPCVALGRKGPGGHGSTGV*VTCTFR Trigger: CCTGAACGTGCAAGTCACCAATACACCTGTGCTGCC...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACGTGATCTTCAGGCTGTaGGCCCCGTGTTTATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: DARDSPCVALGRKGPGGHVIFRL*APCLSP Trigger: GGGAGATAAACACGGGGCCAACAGCCTGAAGATCAC...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | TCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTGCTCTCTCCGCAGAGGTAGAGGCCTaGGCTGTCACGGTCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SGSHIHTMGVRVEGAALSAEVEA*AVTVLH Trigger: GTGGAGGACCGTGACAGCCAAGGCCTCTACCTCTGC...GGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GTAGCTGCTGACCAGCAGCAGGGGAAGTCTAGGAGACAAGTGAAAGGGCAGAGGAAGTCGATCTGCTGGTaGAGCGGGCAGCCCCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VAADQQQGKSRRQVKGQRKSICW*SGQPRR Trigger: CCTGCGGGGCTGCCCGCTCAACCAGCAGATCGACTT...CCTCTGCCCTTTCACTTGTCTCCTAGACTTCCCCTGCTGCTGGTCAGCAGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GCTGAACGGTTGGTTGGTCTGCAGAGAACACTGGGTCTCAGGGAGCCAGCCCACCCGTCCTTGGAGCAGTaGTGCTGGCTCATAAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AERLVGLQRTLGLREPAHPSLEQ*CWLIRS Trigger: GGACCTTATGAGCCAGCACAACTGCTCCAAGGACGG...GTGGGCTGGCTCCCTGAGACCCAGTGTTCTCTGCAGACCAACCAACCGTTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGTCATGGTGCAGGAAGGCCTCTTAGAAGGTGCTCCCCTCAGTTCCCACCAGGCGCCTTGCACCTaGCATGTCTGGAAGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRVMVQEGLLEGAPLSSHQAPCT*HVWKWS Trigger: AGACCACTTCCAGACATGCAAGGTGCAAGGCGCCTG...GTGGGAACTGAGGGGAGCACCTTCTAAGAGGCCTTCCTGCACCATGACCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | CCTCCCAGCTACCCACGTGGTTTTGGCAGGGGTTTGGACCTCTGGGAGGGAGAGGGCAGCACAGGTGTATaGGTGACTTGCACGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPSYPRGFGRGLDLWEGEGSTGV*VTCTFR Trigger: CCTGAACGTGCAAGTCACCAATACACCTGTGCTGCC...CTCTCCCTCCCAGAGGTCCAAACCCCTGCCAAAACCACGTGGGTAGCTGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | ACAGTGTGCGCGAGAGTGTGTGGGAGGGCACAGGGGCCCCAGAGTAGGTGTGCATTATCTCCCCCATTTTaGGAGCCGTCCGCAAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVCARVCGRAQGPQSRCALSPPF*EPSAKA Trigger: TGCCTTTGCGGACGGCTCCAAAAATGGGGGAGATAA...TGCACACCTACTCTGGGGCCCCTGTGCCCTCCCACACACTCTCGCGCACACTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | TCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTGCTCTCTCCGTGGTGCCGATGTACTaGGCCTGGATCTCCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGSHIHTMGVRVEGAALSVVPMY*AWISTC Trigger: GCACGTGGAGATCCAGGCCAAGTACATCGGCACCAC...GGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS GCA 90 bp | GCGGCGGCCACGGCTCCTGGCAGCTCCCGAGTCCTTTCAAACAGATaGAGCTTGTCCTTGTTGGAGTGGAGCATCTTGCCATCCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AAATAPGSSRVLSNR*SLSLLEWSILPSSK Trigger: TTTGGAGGATGGCAAGATGCTCCACTCCAACAAGGACAAGCTGCATCTGTTTGAAAGGACTCGGGAGCTGCCAGGAGCCGTGGCCGCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS CCA 90 bp | TTGTCGATGAGAGGCCAGGCGCCTTGCACCTTGCATGTCTGGAAGTaGTCTGTGAAAGTCCTGAGGTGTGGGTCCCCAAAGAGGCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSMRGQAPCTLHVWK*SVKVLRCGSPKRPQ Trigger: CTGCGGCCTCTTTGGGGACCCACACCTCAGGACTTTCACAGACCACTTCCAGACATGCAAGGTGCAAGGCGCCTGGCCTCTCATCGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS CCA 90 bp | AGGCCTGGTAGTACAGGTCTTCTACGGGCAGCTTCTCTTTGCACTTaGCCACGGCTGTCTCATAGGGGAATGTCTCGGGGACCACGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RPGSTGLLRAASLCT*PRLSHRGMSRGPRE Trigger: CTCCCGTGGTCCCCGAGACATTCCCCTATGAGACAGCCGTGGCCAAGTGCAAAGAGAAGCTGCCCGTAGAAGACCTGTACTACCAGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GTAGCTGCTGACCAGCAGCAGGGGAAGTCTAGGAGACAAGTGAAAGGGCAGAGGGTGGTGCCGATGTACTaGGCCTGGATCTCCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VAADQQQGKSRRQVKGQRVVPMY*AWISTC Trigger: GCACGTGGAGATCCAGGCCAAGTACATCGGCACCAC...CCTCTGCCCTTTCACTTGTCTCCTAGACTTCCCCTGCTGCTGGTCAGCAGCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACCTCCAGAACTCAGAGTaGCACTTGAGGATTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DARDSPCVALGRKGPGGHLQNSE*HLRILQ Trigger: CTGCAAAATCCTCAAGTGCAACTCTGAGTTCTGGAG...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACTTCGTCCATTTCAGCTaGGTAGACTTTCTGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: DARDSPCVALGRKGPGGHFVHFS*VDFLVH Trigger: GTGGACCAGAAAGTCTACCAAGCTGAAATGGACGAA...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | TCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTGCTCTCTCCGTGATCTTCAGGCTGTaGGCCCCGTGTTTATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGSHIHTMGVRVEGAALSVIFRL*APCLSP Trigger: GGGAGATAAACACGGGGCCAACAGCCTGAAGATCAC...GGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GGCCCCAGAGTAGGTGTGCAGCAGTCAGCCGGGCCTGTCTCAGTGCATTGTGAGAGATGCAGCTTGTCCTaGTTGGAGTGGAGCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPRVGVQQSAGPVSVHCERCSLS*LEWSIL Trigger: CAAGATGCTCCACTCCAACAAGGACAAGCTGCATCT...CTCACAATGCACTGAGACAGGCCCGGCTGACTGCTGCACACCTACTCTGGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | CCTCCCAGCTACCCACGTGGTTTTGGCAGGGGTTTGGACCTCTGGGAGGGAGAGTCAAACAGATGCAGCTaGTCCTTGTTGGAGTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPSYPRGFGRGLDLWEGESNRCS*SLLEWS Trigger: GCTCCACTCCAACAAGGACAAGCTGCATCTGTTTGA...CTCTCCCTCCCAGAGGTCCAAACCCCTGCCAAAACCACGTGGGTAGCTGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS GCA 90 bp | AGACACAGGCCTGGTAGTACAGGTCTTCTACGGGCAGCTTCTCTTTaGACTTGGCCACGGCTGTCTCATAGGGGAATGTCTCGGGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: RHRPGSTGLLRAASL*TWPRLSHRGMSRGP Trigger: TGGTCCCCGAGACATTCCCCTATGAGACAGCCGTGGCCAAGTGCAAAGAGAAGCTGCCCGTAGAAGACCTGTACTACCAGGCCTGTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGTCATGGTGCAGGAAGGCCTCTTAGAAGGTGCTCCCCTCAGTTCCCACAACTCAGAGTTGCACTaGAGGATTTTGCAGGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRVMVQEGLLEGAPLSSHNSELH*RILQGE Trigger: CTCCCCCTGCAAAATCCTCAAGTGCAACTCTGAGTT...GTGGGAACTGAGGGGAGCACCTTCTAAGAGGCCTTCCTGCACCATGACCCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTGATCAAACACAACCAAAAGAGGTGGGGCCGTCCTaGGAGCAGTTGTGCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DSVRGPHFQAERDQTQPKEVGPS*EQLCWL Trigger: GAGCCAGCACAACTGCTCCAAGGACGGCCCCACCTC...TTTTGGTTGTGTTTGATCACGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GATGCACGGGACAGTCCCTGCGTAGCACTGGGTAGGAAGGGACCAGGAGGGCACCACTCTTGGAAGTTCTaGAAGATGATGGTGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DARDSPCVALGRKGPGGHHSWKF*KMMVSL Trigger: CAAGCTCACCATCATCTTCAAGAACTTCCAAGAGTG...GTGCCCTCCTGGTCCCTTCCTACCCAGTGCTACGCAGGGACTGTCCCGTGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGAGACCCCAGCACTCTTGGAAGTTCTaGAAGATGATGGTGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGQLALSTGSAAHALRPQHSWKF*KMMVSL Trigger: CAAGCTCACCATCATCTTCAAGAACTTCCAAGAGTG...CTGGGGTCTCAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GAGGACAGGGCAGGCCAGCTGGCCCTATCCACTGGATCTGCTGCTCATGCCCTGCTGGTCCACACACTCTaGGAAGTTCTTGAAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: EDRAGQLALSTGSAAHALLVHTL*EVLEDD Trigger: ATCATCTTCAAGAACTTCCAAGAGTGTGTGGACCAG...CAGGGCATGAGCAGCAGATCCAGTGGATAGGGCCAGCTGGCCTGCCCTGTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GGGCTCTCTGGTATGCCCTTAGTCACACTGCTAAGGAGTACCTGCCTGGGGATAGGCAGCACAGGTGTATaGGTGACTTGCACGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLSGMPLVTLLRSTCLGIGSTGV*VTCTFR Trigger: CCTGAACGTGCAAGTCACCAATACACCTGTGCTGCC...TATCCCCAGGCAGGTACTCCTTAGCAGTGTGACTAAGGGCATACCAGAGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GGCCCCAGAGTAGGTGTGCAGCAGTCAGCCGGGCCTGTCTCAGTGCATTGTGAGCACTCTTGGAAGTTCTaGAAGATGATGGTGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPRVGVQQSAGPVSVHCEHSWKF*KMMVSL Trigger: CAAGCTCACCATCATCTTCAAGAACTTCCAAGAGTG...CTCACAATGCACTGAGACAGGCCCGGCTGACTGCTGCACACCTACTCTGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GTAGCTGCTGACCAGCAGCAGGGGAAGTCTAGGAGACAAGTGAAAGGGCAGAGGTTATCTCCCCCATTTTaGGAGCCGTCCGCAAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VAADQQQGKSRRQVKGQRLSPPF*EPSAKA Trigger: TGCCTTTGCGGACGGCTCCAAAAATGGGGGAGATAA...CCTCTGCCCTTTCACTTGTCTCCTAGACTTCCCCTGCTGCTGGTCAGCAGCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | TCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTGCTCTCTCCAGATGCAGCTTGTCCTaGTTGGAGTGGAGCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGSHIHTMGVRVEGAALSRCSLS*LEWSIL Trigger: CAAGATGCTCCACTCCAACAAGGACAAGCTGCATCT...GGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GGAGGGCACAGCCTCCTGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGCGCCTTGCACCTaGCATGTCTGGAAGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGHSLLATRLHPFAKDAEQAPCT*HVWKWS Trigger: AGACCACTTCCAGACATGCAAGGTGCAAGGCGCCTG...CTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | ACAGTGTGCGCGAGAGTGTGTGGGAGGGCACAGGGGCCCCAGAGTAGGTGTGCAAGGTGTATTGGTGACTaGCACGTTCAGGTAATTATT | + |
|
Preference number: 5 (lower is better) Translates to: TVCARVCGRAQGPQSRCARCIGD*HVQVII Trigger: AATAATTACCTGAACGTGCAAGTCACCAATACACCT...TGCACACCTACTCTGGGGCCCCTGTGCCCTCCCACACACTCTCGCGCACACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | TGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTGGTATAAGTCGATCTGCTGGTaGAGCGGGCAGCCCCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WLQGYIHLLKMLSRALWYKSICW*SGQPRR Trigger: CCTGCGGGGCTGCCCGCTCAACCAGCAGATCGACTT...ATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GTAGCTGCTGACCAGCAGCAGGGGAAGTCTAGGAGACAAGTGAAAGGGCAGAGGTCAAACAGATGCAGCTaGTCCTTGTTGGAGTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VAADQQQGKSRRQVKGQRSNRCS*SLLEWS Trigger: GCTCCACTCCAACAAGGACAAGCTGCATCTGTTTGA...CCTCTGCCCTTTCACTTGTCTCCTAGACTTCCCCTGCTGCTGGTCAGCAGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS CCA 90 bp | CTGGCAGCTCCCGAGTCCTTTCAAACAGATGCAGCTTGTCCTTGTTaGAGTGGAGCATCTTGCCATCCTCCAAAGCATAGTAGGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LAAPESFQTDAACPC*SGASCHPPKHSRQP Trigger: TGGCTGCCTACTATGCTTTGGAGGATGGCAAGATGCTCCACTCCAACAAGGACAAGCTGCATCTGTTTGAAAGGACTCGGGAGCTGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCCTACCTACTGGTCCACACACTCTaGGAAGTTCTTGAAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: GAGAQGSGQSLLSSVSYLLVHTL*EVLEDD Trigger: ATCATCTTCAAGAACTTCCAAGAGTGTGTGGACCAG...TAGGTAGGATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | CCTCTTAGAAGGTGCTCCCCTCAGTTCCCACAAAGAAATGCAGACAAGAGGGCTGTGATCTTCAGGCTGTaGGCCCCGTGTTTATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLRRCSPQFPQRNADKRAVIFRL*APCLSP Trigger: GGGAGATAAACACGGGGCCAACAGCCTGAAGATCAC...AGCCCTCTTGTCTGCATTTCTTTGTGGGAACTGAGGGGAGCACCTTCTAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GGGCTCTCTGGTATGCCCTTAGTCACACTGCTAAGGAGTACCTGCCTGGGGATAAGATGCAGCTTGTCCTaGTTGGAGTGGAGCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLSGMPLVTLLRSTCLGIRCSLS*LEWSIL Trigger: CAAGATGCTCCACTCCAACAAGGACAAGCTGCATCT...TATCCCCAGGCAGGTACTCCTTAGCAGTGTGACTAAGGGCATACCAGAGAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | TGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTGGTATGTGGTGCCGATGTACTaGGCCTGGATCTCCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WLQGYIHLLKMLSRALWYVVPMY*AWISTC Trigger: GCACGTGGAGATCCAGGCCAAGTACATCGGCACCAC...ATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | CCTCTTAGAAGGTGCTCCCCTCAGTTCCCACAAAGAAATGCAGACAAGAGGGCTAACTCAGAGTTGCACTaGAGGATTTTGCAGGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLRRCSPQFPQRNADKRANSELH*RILQGE Trigger: CTCCCCCTGCAAAATCCTCAAGTGCAACTCTGAGTT...AGCCCTCTTGTCTGCATTTCTTTGTGGGAACTGAGGGGAGCACCTTCTAAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GGGGCAGGAGCCCAAGGCTCAGGGCAGTCGTTACTCTCCTCTGTATCCTACCTAAGGTGTATTGGTGACTaGCACGTTCAGGTAATTATT | + |
|
Preference number: 5 (lower is better) Translates to: GAGAQGSGQSLLSSVSYLRCIGD*HVQVII Trigger: AATAATTACCTGAACGTGCAAGTCACCAATACACCT...TAGGTAGGATACAGAGGAGAGTAACGACTGCCCTGAGCCTTGGGCTCCTGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | TCTGGTTCGCACATTCACACGATGGGGGTCAGGGTAGAGGGAGCTGCTCTCTCCAGGTGTATTGGTGACTaGCACGTTCAGGTAATTATT | + |
|
Preference number: 5 (lower is better) Translates to: SGSHIHTMGVRVEGAALSRCIGD*HVQVII Trigger: AATAATTACCTGAACGTGCAAGTCACCAATACACCT...GGAGAGAGCAGCTCCCTCTACCCTGACCCCCATCGTGTGAATGTGCGAACCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GACTCAGTGAGGGGTCCCCACTTCCAAGCAGAACGTGATCAAACACAACCAAAATTATCTCCCCCATTTTaGGAGCCGTCCGCAAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DSVRGPHFQAERDQTQPKLSPPF*EPSAKA Trigger: TGCCTTTGCGGACGGCTCCAAAAATGGGGGAGATAA...TTTTGGTTGTGTTTGATCACGTTCTGCTTGGAAGTGGGGACCCCTCACTGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GGGCACAGCCTCCTGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGTTCGTCCATTTCAGCTaGGTAGACTTTCTGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GHSLLATRLHPFAKDAEQFVHFS*VDFLVH Trigger: GTGGACCAGAAAGTCTACCAAGCTGAAATGGACGAA...CTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | GGGCACAGCCTCCTGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGCTGGTCCACACACTCTaGGAAGTTCTTGAAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: GHSLLATRLHPFAKDAEQLVHTL*EVLEDD Trigger: ATCATCTTCAAGAACTTCCAAGAGTGTGTGGACCAG...CTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCAGGAGGCTGTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | TGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTGGTATTCAAACAGATGCAGCTaGTCCTTGTTGGAGTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WLQGYIHLLKMLSRALWYSNRCS*SLLEWS Trigger: GCTCCACTCCAACAAGGACAAGCTGCATCTGTTTGA...ATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS-3UTR CAA 90 bp | TGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTGGTATCTCCAGAACTCAGAGTaGCACTTGAGGATTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WLQGYIHLLKMLSRALWYLQNSE*HLRILQ Trigger: CTGCAAAATCCTCAAGTGCAACTCTGAGTTCTGGAG...ATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
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| CDS-3UTR CAA 90 bp | TGGCTACAAGGTTACATCCATTTGCTAAAGATGCTGAGCAGGGCTCTCTGGTATTTCGTCCATTTCAGCTaGGTAGACTTTCTGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: WLQGYIHLLKMLSRALWYFVHFS*VDFLVH Trigger: GTGGACCAGAAAGTCTACCAAGCTGAAATGGACGAA...ATACCAGAGAGCCCTGCTCAGCATCTTTAGCAAATGGATGTAACCTTGTAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS GCA 72 bp | CCGAGCGCTCCTGGCTGTCCCCAGCTGGCGGGAGCGTaGGCACTCGCGGCTGTGAGGTGGGGCCGTCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSAPGCPQLAGA*ALAAVRWGRPW Trigger: CCAAGGACGGCCCCACCTCACAGCCGCGAGTGCGCACGCTCCCGCCAGCTGGGGACAGCCAGGAGCGCTCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS TCA 72 bp | GTCCCCAGCTGGCGGGAGCGTGCGCACTCGCGGCTGTaGGGTGGGGCCGTCCTTGGAGCAGTTGTGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VPSWRERAHSRL*GGAVLGAVVLA Trigger: AGCCAGCACAACTGCTCCAAGGACGGCCCCACCTCACAGCCGCGAGTGCGCACGCTCCCGCCAGCTGGGGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS CCA 72 bp | TGTGGTGGCAGCGGCGGCGGCGGCGGCCACGGCTCCTaGCAGCTCCCGAGTCCTTTCAAACAGATGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CGGSGGGGGHGS*QLPSPFKQMQL Trigger: AAGCTGCATCTGTTTGAAAGGACTCGGGAGCTGCCAGGAGCCGTGGCCGCCGCCGCCGCCGCTGCCACCACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS CCA 72 bp | GGCCTGCGAGGGCTTTCAGCGTTGGCACGGAAAGCCTaGAAGTCGATCTGCTGGTTGAGCGGGCAGCCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GLRGLSALARKA*KSICWLSGQPR Trigger: GCGGGGCTGCCCGCTCAACCAGCAGATCGACTTCCAGGCTTTCCGTGCCAACGCTGAAAGCCCTCGCAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS CAA 72 bp | GTTGAGCGGGCAGCCCCGCAGGCAGAGGTAGAGGCCTaGGCTGTCACGGTCCTCCACGGCGTTGACTACCTC | + |
|
Preference number: 6 (lower is better) Translates to: VERAAPQAEVEA*AVTVLHGVDYL Trigger: GAGGTAGTCAACGCCGTGGAGGACCGTGACAGCCAAGGCCTCTACCTCTGCCTGCGGGGCTGCCCGCTCAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS CAA 90 bp | GATCTGCTGGTTGAGCGGGCAGCCCCGCAGGCAGAGGTAGAGGCCTaGGCTGTCACGGTCCTCCACGGCGTTGACTACCTCCTCGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: DLLVERAAPQAEVEA*AVTVLHGVDYLLGH Trigger: ATGCCCGAGGAGGTAGTCAACGCCGTGGAGGACCGTGACAGCCAAGGCCTCTACCTCTGCCTGCGGGGCTGCCCGCTCAACCAGCAGATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS CAA 90 bp | ACGGGAGAGGGACTGGCGGCTGCTGGCCTGCGAGGGCTTTCAGCGTaGGCACGGAAAGCCTGGAAGTCGATCTGCTGGTTGAGCGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TGEGLAAAGLRGLSA*ARKAWKSICWLSGQ Trigger: CTGCCCGCTCAACCAGCAGATCGACTTCCAGGCTTTCCGTGCCAACGCTGAAAGCCCTCGCAGGCCAGCAGCCGCCAGTCCCTCTCCCGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS CCA 72 bp | AGGAGGACCAGAAGTGGGATGGTGCCAAGGAGAATCTaGGGGGCCAAGGGGAATGTGGTGGCAGCGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RRTRSGMVPRRI*GAKGNVVAAAA Trigger: CGCCGCCGCTGCCACCACATTCCCCTTGGCCCCCCAGATTCTCCTTGGCACCATCCCACTTCTGGTCCTCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS TCA 72 bp | GGTAGAGGCCTTGGCTGTCACGGTCCTCCACGGCGTTaGCTACCTCCTCGGGCATCCGGACGGCAAAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GRGLGCHGPPRR*LPPRASGRQRS Trigger: TGACCTTTGCCGTCCGGATGCCCGAGGAGGTAGTCAACGCCGTGGAGGACCGTGACAGCCAAGGCCTCTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS GCA 72 bp | TCAGGTAGCGGCCCACCTGTCGCACCACGATGGTGGTaGCGATGTACTTGGCCTGGATCTCCACGTGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGSGPPVAPRWW*RCTWPGSPRAG Trigger: GCCAGCACGTGGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGACAGGTGGGCCGCTACCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS CAA 72 bp | CCCACCTGTCGCACCACGATGGTGGTGCCGATGTACTaGGCCTGGATCTCCACGTGCTGGCCCGACACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PTCRTTMVVPMY*AWISTCWPDTF Trigger: GAAGGTGTCGGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGACAGGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS CAA 72 bp | GGACTGGCGGCTGCTGGCCTGCGAGGGCTTTCAGCGTaGGCACGGAAAGCCTGGAAGTCGATCTGCTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GLAAAGLRGLSA*ARKAWKSICWL Trigger: CAACCAGCAGATCGACTTCCAGGCTTTCCGTGCCAACGCTGAAAGCCCTCGCAGGCCAGCAGCCGCCAGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS CAA 90 bp | AGCGTGCGCACTCGCGGCTGTGAGGTGGGGCCGTCCTTGGAGCAGTaGTGCTGGCTCATAAGGTCCTCTATGCCATGGACAGCCGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SVRTRGCEVGPSLEQ*CWLIRSSMPWTAEW Trigger: CCACTCGGCTGTCCATGGCATAGAGGACCTTATGAGCCAGCACAACTGCTCCAAGGACGGCCCCACCTCACAGCCGCGAGTGCGCACGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
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| CDS CCA 72 bp | CCACCTGTCGCACCACGATGGTGGTGCCGATGTACTTaGCCTGGATCTCCACGTGCTGGCCCGACACCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PPVAPRWWCRCT*PGSPRAGPTPS Trigger: AGAAGGTGTCGGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGACAGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS CCA 72 bp | TGTCGCACCACGATGGTGGTGCCGATGTACTTGGCCTaGATCTCCACGTGCTGGCCCGACACCTTCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: CRTTMVVPMYLA*ISTCWPDTFSV Trigger: CACAGAGAAGGTGTCGGGCCAGCACGTGGAGATCCAGGCCAAGTACATCGGCACCACCATCGTGGTGCGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS TCA 72 bp | CCTGGATCTCCACGTGCTGGCCCGACACCTTCTCTGTaGTCTTCAGGCTGTTGGCCCCGTGTTTATCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PGSPRAGPTPSL*SSGCWPRVYLP Trigger: GGGGAGATAAACACGGGGCCAACAGCCTGAAGATCACAGAGAAGGTGTCGGGCCAGCACGTGGAGATCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS CAA 72 bp | ACTCGCGGCTGTGAGGTGGGGCCGTCCTTGGAGCAGTaGTGCTGGCTCATAAGGTCCTCTATGCCATGGACA | + |
|
Preference number: 6 (lower is better) Translates to: TRGCEVGPSLEQ*CWLIRSSMPWT Trigger: TGTCCATGGCATAGAGGACCTTATGAGCCAGCACAACTGCTCCAAGGACGGCCCCACCTCACAGCCGCGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094312.12 ENSMUST00000139780.3 |
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| CDS CAA 90 bp | GGTGGCGGTAGCTGCGGAGCCCGGCAGCACAGGTGTATTGGTGACTaGCACGTTCAGGTAATTATTGTCGATGAGAGGCCAGGCGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GGGSCGARQHRCIGD*HVQVIIVDERPGAL Trigger: CAAGGCGCCTGGCCTCTCATCGACAATAATTACCTGAACGTGCAAGTCACCAATACACCTGTGCTGCCGGGCTCCGCAGCTACCGCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS CCA 72 bp | AGAGGCCAGGCGCCTTGCACCTTGCATGTCTGGAAGTaGTCTGTGAAAGTCCTGAGGTGTGGGTCCCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RGQAPCTLHVWK*SVKVLRCGSPK Trigger: CTTTGGGGACCCACACCTCAGGACTTTCACAGACCACTTCCAGACATGCAAGGTGCAAGGCGCCTGGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS CCA 72 bp | TCGATGAGAGGCCAGGCGCCTTGCACCTTGCATGTCTaGAAGTGGTCTGTGAAAGTCCTGAGGTGTGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SMRGQAPCTLHV*KWSVKVLRCGS Trigger: GGACCCACACCTCAGGACTTTCACAGACCACTTCCAGACATGCAAGGTGCAAGGCGCCTGGCCTCTCATCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS CCA 72 bp | GGTGTGGGTCCCCAAAGAGGCCGCAGTGAGTGTAGTTaGGGGCAGCTGAGTGCTTGTGGAAACTCTTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GVGPQRGRSECS*GQLSACGNSSH Trigger: ATGAGAAGAGTTTCCACAAGCACTCAGCTGCCCCCAACTACACTCACTGCGGCCTCTTTGGGGACCCACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS CCA 72 bp | GCATGTCTGGAAGTGGTCTGTGAAAGTCCTGAGGTGTaGGTCCCCAAAGAGGCCGCAGTGAGTGTAGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ACLEVVCESPEV*VPKEAAVSVVG Trigger: CCCAACTACACTCACTGCGGCCTCTTTGGGGACCCACACCTCAGGACTTTCACAGACCACTTCCAGACATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS CAA 72 bp | ACACACTCTTGGAAGTTCTTGAAGATGATGGTGAGCTaGCTGGTGGCGGTAGCTGCGGAGCCCGGCAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: THSWKFLKMMVS*LVAVAAEPGST Trigger: TGTGCTGCCGGGCTCCGCAGCTACCGCCACCAGCAAGCTCACCATCATCTTCAAGAACTTCCAAGAGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS GCA 72 bp | ACGGCTCCTGGCAGCTCCCGAGTCCTTTCAAACAGATaGAGCTTGTCCTTGTTGGAGTGGAGCATCTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TAPGSSRVLSNR*SLSLLEWSILP Trigger: TGGCAAGATGCTCCACTCCAACAAGGACAAGCTGCATCTGTTTGAAAGGACTCGGGAGCTGCCAGGAGCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS CCA 72 bp | AGTACAGGTCTTCTACGGGCAGCTTCTCTTTGCACTTaGCCACGGCTGTCTCATAGGGGAATGTCTCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: STGLLRAASLCT*PRLSHRGMSRG Trigger: TCCCCGAGACATTCCCCTATGAGACAGCCGTGGCCAAGTGCAAAGAGAAGCTGCCCGTAGAAGACCTGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
||
| CDS CAA 72 bp | CCTGGCAGCTCCCGAGTCCTTTCAAACAGATGCAGCTaGTCCTTGTTGGAGTGGAGCATCTTGCCATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PGSSRVLSNRCS*SLLEWSILPSS Trigger: GGAGGATGGCAAGATGCTCCACTCCAACAAGGACAAGCTGCATCTGTTTGAAAGGACTCGGGAGCTGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS TCA 72 bp | CCCAAAGAGGCCGCAGTGAGTGTAGTTGGGGGCAGCTaGGTGCTTGTGGAAACTCTTCTCATAGTGGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: PKEAAVSVVGGS*VLVETLLIVAD Trigger: ATCTGCCACTATGAGAAGAGTTTCCACAAGCACTCAGCTGCCCCCAACTACACTCACTGCGGCCTCTTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS GCA 72 bp | CCTGGTAGTACAGGTCTTCTACGGGCAGCTTCTCTTTaGACTTGGCCACGGCTGTCTCATAGGGGAATGTCT | + |
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Preference number: 6 (lower is better) Translates to: PGSTGLLRAASL*TWPRLSHRGMS Trigger: AGACATTCCCCTATGAGACAGCCGTGGCCAAGTGCAAAGAGAAGCTGCCCGTAGAAGACCTGTACTACCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS CAA 72 bp | AGCTGCGGAGCCCGGCAGCACAGGTGTATTGGTGACTaGCACGTTCAGGTAATTATTGTCGATGAGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SCGARQHRCIGD*HVQVIIVDERP Trigger: TGGCCTCTCATCGACAATAATTACCTGAACGTGCAAGTCACCAATACACCTGTGCTGCCGGGCTCCGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS CAA 90 bp | GACTTGCACGTTCAGGTAATTATTGTCGATGAGAGGCCAGGCGCCTaGCACCTTGCATGTCTGGAAGTGGTCTGTGAAAGTCCTGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: DLHVQVIIVDERPGA*HLACLEVVCESPEV Trigger: CACCTCAGGACTTTCACAGACCACTTCCAGACATGCAAGGTGCAAGGCGCCTGGCCTCTCATCGACAATAATTACCTGAACGTGCAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS CAA 72 bp | AGCTCCCGAGTCCTTTCAAACAGATGCAGCTTGTCCTaGTTGGAGTGGAGCATCTTGCCATCCTCCAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SSRVLSNRCSLS*LEWSILPSSKA Trigger: TGCTTTGGAGGATGGCAAGATGCTCCACTCCAACAAGGACAAGCTGCATCTGTTTGAAAGGACTCGGGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS CCA 72 bp | CCCGAGTCCTTTCAAACAGATGCAGCTTGTCCTTGTTaGAGTGGAGCATCTTGCCATCCTCCAAAGCATAGT | + |
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Preference number: 6 (lower is better) Translates to: PESFQTDAACPC*SGASCHPPKHS Trigger: ACTATGCTTTGGAGGATGGCAAGATGCTCCACTCCAACAAGGACAAGCTGCATCTGTTTGAAAGGACTCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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| CDS CAA 72 bp | GTTCAGGTAATTATTGTCGATGAGAGGCCAGGCGCCTaGCACCTTGCATGTCTGGAAGTGGTCTGTGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: VQVIIVDERPGA*HLACLEVVCES Trigger: ACTTTCACAGACCACTTCCAGACATGCAAGGTGCAAGGCGCCTGGCCTCTCATCGACAATAATTACCTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094312.12 ENSMUST00000119206.3 ENSMUST00000139780.3 |
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