Pregenerated sensors for RGL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041354Ensembl transcript IDs: ENSMUST00000047503.16, ENSMUST00000173284.2, ENSMUST00000234226.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGCACAGATGATAATGCCACATTCCGCAGAGGTGGAAGCTAGATaGAGGTATCCAACATGGTTACGTGGTCACCAGTCCCACGGGGCT | + |
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Preference number: 1 (lower is better) Translates to: PAQMIMPHSAEVEAR*RYPTWLRGHQSHGA Trigger: AGCCCCGTGGGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTCTGCGGAATGTGGCATTATCATCTGTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| 3UTR CCA 90 bp | CCGCAGTGGTTTCGTAAACAGGTGACTTCACTGTCCCAGGGTGGCTaGCCACCTTTCAGGGTTTCTGCTCTAATATTGTGGCCACCATGT | + |
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Preference number: 1 (lower is better) Translates to: PQWFRKQVTSLSQGG*PPFRVSALILWPPC Trigger: ACATGGTGGCCACAATATTAGAGCAGAAACCCTGAAAGGTGGCCAGCCACCCTGGGACAGTGAAGTCACCTGTTTACGAAACCACTGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGCCCCAGGCTCAGCCTCTAGGCCTTCCCTTGGCCTGTCACAGGCTGGCATTCACTGTCCCAGGGTaGCTGGCCACCTTTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: PLPQAQPLGLPLACHRLAFTVPG*LATFQG Trigger: ACCCTGAAAGGTGGCCAGCCACCCTGGGACAGTGAA...TGCCAGCCTGTGACAGGCCAAGGGAAGGCCTAGAGGCTGAGCCTGGGGCAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCCAGGCTCAGCCTCTAGGCCTTCCCTTGGCCTGTCACAGGCTGGCATGTACCTTTCAGGGTTTCTaGTCTAATATTGTGGCCACC | + |
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Preference number: 2 (lower is better) Translates to: LPQAQPLGLPLACHRLACTFQGF*SNIVAT Trigger: GGTGGCCACAATATTAGAGCAGAAACCCTGAAAGGT...ACATGCCAGCCTGTGACAGGCCAAGGGAAGGCCTAGAGGCTGAGCCTGGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGACTTCACTGTCCCAGGGTGGCTGGCCACCTTTCAGGGTTTCTGCTCTATGTGGCCACCATGTGTaGCTGCTCACTCCTGGTATG | + |
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Preference number: 2 (lower is better) Translates to: QVTSLSQGGWPPFRVSALCGHHV*LLTPGM Trigger: CATACCAGGAGTGAGCAGCCACACATGGTGGCCACA...TAGAGCAGAAACCCTGAAAGGTGGCCAGCCACCCTGGGACAGTGAAGTCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| 3UTR-3UTR CCA 90 bp | TGCAGGTATCCAACATGGTTACGTGGTCACCAGTCCCACGGGGCTGGGGCTGGGTCTGCTCTAATATTGTaGCCACCATGTGTGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: CRYPTWLRGHQSHGAGAGSALIL*PPCVAA Trigger: AGCAGCCACACATGGTGGCCACAATATTAGAGCAGA...CCCAGCCCCAGCCCCGTGGGACTGGTGACCACGTAACCATGTTGGATACCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| 3UTR CAA 90 bp | CTGTCCCAGGGTGGCTGGCCACCTTTCAGGGTTTCTGCTCTAATATaGTGGCCACCATGTGTGGCTGCTCACTCCTGGTATGAGTTGCTA | + |
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Preference number: 2 (lower is better) Translates to: LSQGGWPPFRVSALI*WPPCVAAHSWYELL Trigger: TAGCAACTCATACCAGGAGTGAGCAGCCACACATGGTGGCCACAATATTAGAGCAGAAACCCTGAAAGGTGGCCAGCCACCCTGGGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| 3UTR CCA 72 bp | ATGGTTACGTGGTCACCAGTCCCACGGGGCTGGGGCTaGGGCTGGCTTCCGCAGTGGTTTCGTAAACAGGTG | + |
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Preference number: 3 (lower is better) Translates to: MVTWSPVPRGWG*GWLPQWFRKQV Trigger: CACCTGTTTACGAAACCACTGCGGAAGCCAGCCCCAGCCCCAGCCCCGTGGGACTGGTGACCACGTAACCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| 3UTR TCA 72 bp | GCTGGGGCTGGCTTCCGCAGTGGTTTCGTAAACAGGTaGCTTCACTGTCCCAGGGTGGCTGGCCACCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: AGAGFRSGFVNR*LHCPRVAGHLS Trigger: TGAAAGGTGGCCAGCCACCCTGGGACAGTGAAGTCACCTGTTTACGAAACCACTGCGGAAGCCAGCCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| 3UTR CCA 72 bp | TCCGCAGAGGTGGAAGCTAGATGCAGGTATCCAACATaGTTACGTGGTCACCAGTCCCACGGGGCTGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: SAEVEARCRYPT*LRGHQSHGAGA Trigger: AGCCCCAGCCCCGTGGGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTCTGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| 3UTR-3UTR CAA 90 bp | CCCTTGGCCTGTCACAGGCTGGCATGTGGCAGGGACCAGTACTCTTCCCAGCACGTTTCTGCTCTAATATaGTGGCCACCATGTGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: PLACHRLACGRDQYSSQHVSALI*WPPCVA Trigger: AGCCACACATGGTGGCCACAATATTAGAGCAGAAAC...GTGCTGGGAAGAGTACTGGTCCCTGCCACATGCCAGCCTGTGACAGGCCAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| 3UTR CCA 72 bp | TCTAGGCCTTCCCTTGGCCTGTCACAGGCTGGCATGTaGCAGGGACCAGTACTCTTCCCAGCACAGATGATA | + |
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Preference number: 3 (lower is better) Translates to: SRPSLGLSQAGM*QGPVLFPAQMI Trigger: TATCATCTGTGCTGGGAAGAGTACTGGTCCCTGCCACATGCCAGCCTGTGACAGGCCAAGGGAAGGCCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| 3UTR-3UTR CAA 90 bp | CTGCCCCAGGCTCAGCCTCTAGGCCTTCCCTTGGCCTGTCACAGGCTGGCATGTCACTCCTGGTATGAGTaGCTATGTAAACCAATAGGA | + |
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Preference number: 3 (lower is better) Translates to: LPQAQPLGLPLACHRLACHSWYE*LCKPIG Trigger: TCCTATTGGTTTACATAGCAACTCATACCAGGAGTG...ACATGCCAGCCTGTGACAGGCCAAGGGAAGGCCTAGAGGCTGAGCCTGGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| 3UTR CCA 72 bp | GGCTGGCCACCTTTCAGGGTTTCTGCTCTAATATTGTaGCCACCATGTGTGGCTGCTCACTCCTGGTATGAG | + |
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Preference number: 3 (lower is better) Translates to: GWPPFRVSALIL*PPCVAAHSWYE Trigger: CTCATACCAGGAGTGAGCAGCCACACATGGTGGCCACAATATTAGAGCAGAAACCCTGAAAGGTGGCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| 3UTR GCA 72 bp | ATGATAATGCCACATTCCGCAGAGGTGGAAGCTAGATaGAGGTATCCAACATGGTTACGTGGTCACCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: MIMPHSAEVEAR*RYPTWLRGHQS Trigger: GGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTCTGCGGAATGTGGCATTATCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR GCA 90 bp | CCTCTGCCCCAGGCTCAGCCTCTAGGCCTTCCCTTGGCCTGTCACAGGCTGGCACCCGGCTCCGGAAGCTaGTCAGCACGACTCCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PLPQAQPLGLPLACHRLAPGSGS*SARLPR Trigger: CCGGGGGAGTCGTGCTGAGCAGCTTCCGGAGCCGGG...TGCCAGCCTGTGACAGGCCAAGGGAAGGCCTAGAGGCTGAGCCTGGGGCAGAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR GCA 90 bp | TGCCCTCTGCCCCAGGCTCAGCCTCTAGGCCTTCCCTTGGCCTGTCACAGGCTGTCATCCTCTTCCTCCTaGCCCCCGCCCACGGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: CPLPQAQPLGLPLACHRLSSSSS*PPPTAR Trigger: CCGGGCCGTGGGCGGGGGGCAGGAGGAAGAGGATGA...CAGCCTGTGACAGGCCAAGGGAAGGCCTAGAGGCTGAGCCTGGGGCAGAGGGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR GCA 90 bp | CCTCTGCCCCAGGCTCAGCCTCTAGGCCTTCCCTTGGCCTGTCACAGGCTGGCATGGCCGAGGTGTCCTTaGAGCGGGGGAGTCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: PLPQAQPLGLPLACHRLAWPRCP*SGGVTG Trigger: ACCAGTGACTCCCCCGCTGCAAGGACACCTCGGCCA...TGCCAGCCTGTGACAGGCCAAGGGAAGGCCTAGAGGCTGAGCCTGGGGCAGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR CCA 90 bp | TGCCCTCTGCCCCAGGCTCAGCCTCTAGGCCTTCCCTTGGCCTGTCACAGGCTGACCTTGGGGCCTTCTTaGAGTGTGGCTCCACAGGGG | + |
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Preference number: 4 (lower is better) Translates to: CPLPQAQPLGLPLACHRLTLGPS*SVAPQG Trigger: CCCCTGTGGAGCCACACTCCAAGAAGGCCCCAAGGT...CAGCCTGTGACAGGCCAAGGGAAGGCCTAGAGGCTGAGCCTGGGGCAGAGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR TCA 90 bp | CCTGTCACAGGCTGGCATGTGGCAGGGACCAGTACTCTTCCCAGCACAGATGATGAGGCTGAGCGACGGTaGCCCCGGGAAGGCCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: PVTGWHVAGTSTLPSTDDEAERR*PREGLG Trigger: CCCTAGGCCTTCCCGGGGTCACCGTCGCTCAGCCTC...ATCATCTGTGCTGGGAAGAGTACTGGTCCCTGCCACATGCCAGCCTGTGACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR TCA 90 bp | CCTGTCACAGGCTGGCATGTGGCAGGGACCAGTACTCTTCCCAGCACAGATGATGCTCGGAGGAGTTCCTaGGGCAGAGGGGCCGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PVTGWHVAGTSTLPSTDDARRSS*GRGAAV Trigger: CACAGCGGCCCCTCTGCCTCAGGAACTCCTCCGAGC...ATCATCTGTGCTGGGAAGAGTACTGGTCCCTGCCACATGCCAGCCTGTGACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR GCA 90 bp | TGGCTGGCCACCTTTCAGGGTTTCTGCTCTAATATTGTGGCCACCATGTGTGGCCCAGGGCCTCCAGAGTaGCAGCGCGGAGCCGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: WLATFQGFCSNIVATMCGPGPPE*QRGAVG Trigger: CCCGACGGCTCCGCGCTGGCACTCTGGAGGCCCTGG...GCCACACATGGTGGCCACAATATTAGAGCAGAAACCCTGAAAGGTGGCCAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR CCA 90 bp | GAGGTGGAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCAGTCCCACCACGGCCCGGCCACCTaGGTCCCCACCCTCTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: EVEARCRYPTWLRGHQSHHGPAT*VPTLFG Trigger: CCCGAAGAGGGTGGGGACCCAGGTGGCCGGGCCGTG...GTGGGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR CCA 90 bp | CCAGGGTGGCTGGCCACCTTTCAGGGTTTCTGCTCTAATATTGTGGCCACCATGGAGCCGGGCCCTCTGTaGGGGCCGCAGTGGTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: PGWLATFQGFCSNIVATMEPGPL*GPQWSH Trigger: GTGAGACCACTGCGGCCCCCACAGAGGGCCCGGCTC...CATGGTGGCCACAATATTAGAGCAGAAACCCTGAAAGGTGGCCAGCCACCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR CCA 90 bp | CCTCTGCCCCAGGCTCAGCCTCTAGGCCTTCCCTTGGCCTGTCACAGGCTGGCAGCTTCAGTTAAAGGCTaGAGGCCCTGGAGCCATTGC | + |
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Preference number: 4 (lower is better) Translates to: PLPQAQPLGLPLACHRLAASVKG*RPWSHC Trigger: GCAATGGCTCCAGGGCCTCCAGCCTTTAACTGAAGC...TGCCAGCCTGTGACAGGCCAAGGGAAGGCCTAGAGGCTGAGCCTGGGGCAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR CCA 90 bp | CCCTTGGCCTGTCACAGGCTGGCATGTGGCAGGGACCAGTACTCTTCCCAGCACAGCTGTTCGGCCAAGTaGTCAGCGAGGAACACCAGG | + |
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Preference number: 4 (lower is better) Translates to: PLACHRLACGRDQYSSQHSCSAK*SARNTR Trigger: CCTGGTGTTCCTCGCTGACCACTTGGCCGAACAGCT...GTGCTGGGAAGAGTACTGGTCCCTGCCACATGCCAGCCTGTGACAGGCCAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR CCA 90 bp | CCTCTGCCCCAGGCTCAGCCTCTAGGCCTTCCCTTGGCCTGTCACAGGCTGGCAAAAGGCTGGAGGCCCTaGAGCCATTGCTGGATATCA | + |
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Preference number: 4 (lower is better) Translates to: PLPQAQPLGLPLACHRLAKGWRP*SHCWIS Trigger: TGATATCCAGCAATGGCTCCAGGGCCTCCAGCCTTT...TGCCAGCCTGTGACAGGCCAAGGGAAGGCCTAGAGGCTGAGCCTGGGGCAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR CCA 90 bp | CTGCCCCAGGCTCAGCCTCTAGGCCTTCCCTTGGCCTGTCACAGGCTGGCATGTTCCCCCAGCTCCATCTaGACTCGGATGATTCGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LPQAQPLGLPLACHRLACSPSSI*TRMIRQ Trigger: TTGCCGAATCATCCGAGTCCAGATGGAGCTGGGGGA...ACATGCCAGCCTGTGACAGGCCAAGGGAAGGCCTAGAGGCTGAGCCTGGGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR TCA 90 bp | GAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCAGTCCCACGGGGCTTCCTCCCCGTGGCCTTaGTCCTGGGAAAGGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: EARCRYPTWLRGHQSHGASSPWP*SWERSP Trigger: GGGGCTCCTTTCCCAGGATCAAGGCCACGGGGAGGA...AGCCCCGTGGGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR GCA 90 bp | CTTGGCCTGTCACAGGCTGGCATGTGGCAGGGACCAGTACTCTTCCCAGCACAGTCAGAACAGTGCCCGTaGAATCTTCCTCCCCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LGLSQAGMWQGPVLFPAQSEQCP*NLPPRG Trigger: GCCACGGGGAGGAAGATTGCACGGGCACTGTTCTGA...CTGTGCTGGGAAGAGTACTGGTCCCTGCCACATGCCAGCCTGTGACAGGCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR CCA 90 bp | CTGTCACAGGCTGGCATGTGGCAGGGACCAGTACTCTTCCCAGCACAGATGATAGGCCTTCTTGGAGTGTaGCTCCACAGGGGGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: LSQAGMWQGPVLFPAQMIGLLGV*LHRGLR Trigger: CCGCAGCCCCCTGTGGAGCCACACTCCAAGAAGGCC...TATCATCTGTGCTGGGAAGAGTACTGGTCCCTGCCACATGCCAGCCTGTGACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR CCA 90 bp | CAGGCTCAGCCTCTAGGCCTTCCCTTGGCCTGTCACAGGCTGGCATGTGGCAGGCCACGACATTCTTTCTaGAGGCGCAACAGCTCCGAA | + |
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Preference number: 4 (lower is better) Translates to: QAQPLGLPLACHRLACGRPRHSF*RRNSSE Trigger: TTCGGAGCTGTTGCGCCTCCAGAAAGAATGTCGTGG...CCTGCCACATGCCAGCCTGTGACAGGCCAAGGGAAGGCCTAGAGGCTGAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR TCA 90 bp | GGTGGCTGGCCACCTTTCAGGGTTTCTGCTCTAATATTGTGGCCACCATGTGTGCCTGGCCGGTCTCTGTaGCCCCAGAGGCCTCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: GGWPPFRVSALILWPPCVPGRSL*PQRPPK Trigger: TTTGGGAGGCCTCTGGGGTCACAGAGACCGGCCAGG...CACACATGGTGGCCACAATATTAGAGCAGAAACCCTGAAAGGTGGCCAGCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR TCA 90 bp | CAGGTGACTTCACTGTCCCAGGGTGGCTGGCCACCTTTCAGGGTTTCTGCTCTAACAGACGGGCAGAGGTaGGAATGTCCTGGCCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QVTSLSQGGWPPFRVSALTDGQR*ECPGRS Trigger: AGACCGGCCAGGACATTCTCACCTCTGCCCGTCTGT...TAGAGCAGAAACCCTGAAAGGTGGCCAGCCACCCTGGGACAGTGAAGTCACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR GCA 90 bp | CTGTCACAGGCTGGCATGTGGCAGGGACCAGTACTCTTCCCAGCACAGATGATAGGCTCCACAGGGGGCTaGGGCTTCACTTCCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: LSQAGMWQGPVLFPAQMIGSTGG*GFTSCM Trigger: CATGCAGGAAGTGAAGCCGCAGCCCCCTGTGGAGCC...TATCATCTGTGCTGGGAAGAGTACTGGTCCCTGCCACATGCCAGCCTGTGACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR GCA 90 bp | CTGCCCCAGGCTCAGCCTCTAGGCCTTCCCTTGGCCTGTCACAGGCTGGCATGTAGGCCCTGGAGCCATTaGTGGATATCAGAGTTAGGT | + |
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Preference number: 4 (lower is better) Translates to: LPQAQPLGLPLACHRLACRPWSH*WISELG Trigger: ACCTAACTCTGATATCCAGCAATGGCTCCAGGGCCT...ACATGCCAGCCTGTGACAGGCCAAGGGAAGGCCTAGAGGCTGAGCCTGGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR CCA 90 bp | GCAGAGGTGGAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCAGTCCTCGGGAGGAGCGAGGTaGAGGCAAGGGAGCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: AEVEARCRYPTWLRGHQSSGGAR*RQGSQG Trigger: CCCTTGGCTCCCTTGCCTCCACCTCGCTCCTCCCGA...GGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR CCA 90 bp | CAGGTGACTTCACTGTCCCAGGGTGGCTGGCCACCTTTCAGGGTTTCTGCTCTAGGCCACTTCATGTGCTaGGCGAGGCGAGTCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: QVTSLSQGGWPPFRVSALGHFMC*ARRVSR Trigger: TCTGCTGACTCGCCTCGCCCAGCACATGAAGTGGCC...TAGAGCAGAAACCCTGAAAGGTGGCCAGCCACCCTGGGACAGTGAAGTCACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR CCA 90 bp | CCCTTGGCCTGTCACAGGCTGGCATGTGGCAGGGACCAGTACTCTTCCCAGCACCTTGGAGCTTTGTCCTaGCTTGTCACCAGGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: PLACHRLACGRDQYSSQHLGALS*LVTRML Trigger: GAGCATCCTGGTGACAAGCCAGGACAAAGCTCCAAG...GTGCTGGGAAGAGTACTGGTCCCTGCCACATGCCAGCCTGTGACAGGCCAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR TCA 90 bp | GAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCAGTCCCACGGGGCTCATCCAAGAGGTGTCTaGCCAGGGCCTCCAGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: EARCRYPTWLRGHQSHGAHPRGV*PGPPEC Trigger: GCACTCTGGAGGCCCTGGTCAGACACCTCTTGGATG...AGCCCCGTGGGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR TCA 90 bp | CAGGTGACTTCACTGTCCCAGGGTGGCTGGCCACCTTTCAGGGTTTCTGCTCTAAGCTCACCGGGAGGATaGGATTCAAGGGCTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QVTSLSQGGWPPFRVSALSSPGG*DSRASS Trigger: GCTGGAAGCCCTTGAATCTCATCCTCCCGGTGAGCT...TAGAGCAGAAACCCTGAAAGGTGGCCAGCCACCCTGGGACAGTGAAGTCACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR TCA 90 bp | CCCTTGGCCTGTCACAGGCTGGCATGTGGCAGGGACCAGTACTCTTCCCAGCACGGTCAAGTTGACCCTTaGCCTCAGAGCCAAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: PLACHRLACGRDQYSSQHGQVDP*PQSQNP Trigger: AGGATTTTGGCTCTGAGGTCAAGGGTCAACTTGACC...GTGCTGGGAAGAGTACTGGTCCCTGCCACATGCCAGCCTGTGACAGGCCAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR CCA 90 bp | CCTGTCACAGGCTGGCATGTGGCAGGGACCAGTACTCTTCCCAGCACAGATGATGAGGTGAGAATGTCCTaGCCGGTCTCTGTGACCCCA | + |
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Preference number: 4 (lower is better) Translates to: PVTGWHVAGTSTLPSTDDEVRMS*PVSVTP Trigger: TGGGGTCACAGAGACCGGCCAGGACATTCTCACCTC...ATCATCTGTGCTGGGAAGAGTACTGGTCCCTGCCACATGCCAGCCTGTGACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR CCA 90 bp | ATTCCGCAGAGGTGGAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCGCAATCAGAGGACCCTaGCCCAGATACCCCGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: IPQRWKLDAGIQHGYVVTAIRGP*PRYPAP Trigger: GGGGGCGGGGTATCTGGGCCAGGGTCCTCTGATTGC...GGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTCTGCGGAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR TCA 90 bp | CCTGTCACAGGCTGGCATGTGGCAGGGACCAGTACTCTTCCCAGCACAGATGATTCAAGCCGGTCAAGTTaGCCCTTGACCTCAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: PVTGWHVAGTSTLPSTDDSSRSS*PLTSEP Trigger: TGGCTCTGAGGTCAAGGGTCAACTTGACCGGCTTGA...ATCATCTGTGCTGGGAAGAGTACTGGTCCCTGCCACATGCCAGCCTGTGACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR TCA 90 bp | GCAGAGGTGGAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCAGTCCTGGCCCCTCTCCAATTaGGGTGGCCCCCAAGACAGA | + |
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Preference number: 4 (lower is better) Translates to: AEVEARCRYPTWLRGHQSWPLSN*GGPQDR Trigger: TCTGTCTTGGGGGCCACCTCAATTGGAGAGGGGCCA...GGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR TCA 90 bp | CTAATATTGTGGCCACCATGTGTGGCTGCTCACTCCTGGTATGAGTTGCTATGTAGACCCACAGGAGGCTaGGCGACGGTGACCCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: LILWPPCVAAHSWYELLCRPTGG*ATVTPG Trigger: TCCCGGGGTCACCGTCGCTCAGCCTCCTGTGGGTCT...ACATAGCAACTCATACCAGGAGTGAGCAGCCACACATGGTGGCCACAATATTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS-3UTR GCA 90 bp | CCAGGGTGGCTGGCCACCTTTCAGGGTTTCTGCTCTAATATTGTGGCCACCATGTGTGCAAGGAGGGGCTaGTTTCCAGGGCAGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGWLATFQGFCSNIVATMCARRG*FPGQSP Trigger: TGGACTCTGCCCTGGAAAGCAGCCCCTCCTTGCACA...CATGGTGGCCACAATATTAGAGCAGAAACCCTGAAAGGTGGCCAGCCACCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR GCA 90 bp | GCAGAGGTGGAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCAGTCCCAGCAGAGGGTCTTCTaGGCTGCCGCAGGAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AEVEARCRYPTWLRGHQSQQRVF*AAAGGS Trigger: ACTTCCTCCTGCGGCAGCGCAGAAGACCCTCTGCTG...GGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CCA 90 bp | GGTGGCTGGCCACCTTTCAGGGTTTCTGCTCTAATATTGTGGCCACCATGTGTGACACCAGGACATCCGTaGGGTCAGCAGGGGAATCGC | + |
|
Preference number: 4 (lower is better) Translates to: GGWPPFRVSALILWPPCVTPGHP*GQQGNR Trigger: GCGATTCCCCTGCTGACCCCACGGATGTCCTGGTGT...CACACATGGTGGCCACAATATTAGAGCAGAAACCCTGAAAGGTGGCCAGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CCA 90 bp | GGTGGCTGGCCACCTTTCAGGGTTTCTGCTCTAATATTGTGGCCACCATGTGTGGCTGCCCGAAGCCTGTaGATAGGGCTGGACTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGWPPFRVSALILWPPCVAARSL*IGLDCR Trigger: TCTGCAGTCCAGCCCTATCCACAGGCTTCGGGCAGC...CACACATGGTGGCCACAATATTAGAGCAGAAACCCTGAAAGGTGGCCAGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CCA 90 bp | ATTCCGCAGAGGTGGAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCTGTGGGAACCCGGGGTaGCAGCAGAGGGTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IPQRWKLDAGIQHGYVVTCGNPG*QQRVFC Trigger: GCAGAAGACCCTCTGCTGCCACCCCGGGTTCCCACA...GGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTCTGCGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR TCA 90 bp | GCAGAGGTGGAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCAGTCCGCTTCACTTCCTGCATaGGGAGCTCTCTGCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AEVEARCRYPTWLRGHQSASLPA*GALCSG Trigger: CCCAGAGCAGAGAGCTCCTCATGCAGGAAGTGAAGC...GGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CCA 90 bp | CCTGTCACAGGCTGGCATGTGGCAGGGACCAGTACTCTTCCCAGCACAGATGATCCCTGGAGCCATTGCTaGATATCAGAGTTAGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PVTGWHVAGTSTLPSTDDPWSHC*ISELGR Trigger: CCGACCTAACTCTGATATCCAGCAATGGCTCCAGGG...ATCATCTGTGCTGGGAAGAGTACTGGTCCCTGCCACATGCCAGCCTGTGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR GCA 90 bp | ATTCCGCAGAGGTGGAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCCACAACACCCTCCCGTaGTGCATACCCTGTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IPQRWKLDAGIQHGYVVTHNTLP*CIPCPK Trigger: CTTCGGACAGGGTATGCAGCACGGGAGGGTGTTGTG...GGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTCTGCGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR GCA 90 bp | GAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCAGTCCCACGGGGCTGGCTTGTCACCAGGATaGTCTTGTAGACGCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EARCRYPTWLRGHQSHGAGLSPG*SCRRCH Trigger: ATGGCAGCGTCTACAAGAGCATCCTGGTGACAAGCC...AGCCCCGTGGGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGTGGAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCAGTCCGTCACTGGTCCCTGGTaGCTCCACTTCACAGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: AEVEARCRYPTWLRGHQSVTGPW*LHFTGY Trigger: GTATCCTGTGAAGTGGAGCCACCAGGGACCAGTGAC...GGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| 3UTR CAA 72 bp | GGTGGCTGGCCACCTTTCAGGGTTTCTGCTCTAATATaGTGGCCACCATGTGTGGCTGCTCACTCCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GGWPPFRVSALI*WPPCVAAHSWY Trigger: ATACCAGGAGTGAGCAGCCACACATGGTGGCCACAATATTAGAGCAGAAACCCTGAAAGGTGGCCAGCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR TCA 90 bp | GGTGGCTGGCCACCTTTCAGGGTTTCTGCTCTAATATTGTGGCCACCATGTGTGCCAAAATCCTCAGGGTaGGAGGCCAGCCAAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGWPPFRVSALILWPPCVPKSSG*EASQVE Trigger: TTCAACTTGGCTGGCCTCTCACCCTGAGGATTTTGG...CACACATGGTGGCCACAATATTAGAGCAGAAACCCTGAAAGGTGGCCAGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR TCA 90 bp | CTGTCACAGGCTGGCATGTGGCAGGGACCAGTACTCTTCCCAGCACAGATGATAATAGAAGACGTTAGCTaGGTGTGGGATGGTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSQAGMWQGPVLFPAQMIIEDVS*VWDGQL Trigger: GAGCTGACCATCCCACACTCAGCTAACGTCTTCTAT...TATCATCTGTGCTGGGAAGAGTACTGGTCCCTGCCACATGCCAGCCTGTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CCA 90 bp | CCAGGGTGGCTGGCCACCTTTCAGGGTTTCTGCTCTAATATTGTGGCCACCATGTCAAGAGGCCTGTACTaGCGGCTTGTGACAGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGWLATFQGFCSNIVATMSRGLY*RLVTVK Trigger: CTTTACTGTCACAAGCCGCCAGTACAGGCCTCTTGA...CATGGTGGCCACAATATTAGAGCAGAAACCCTGAAAGGTGGCCAGCCACCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CCA 90 bp | CTAATATTGTGGCCACCATGTGTGGCTGCTCACTCCTGGTATGAGTTGCTATGTAGGACACAAGCGGAGTaGGGCCTCCAACAGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LILWPPCVAAHSWYELLCRTQAE*GLQQSP Trigger: TGGGCTCTGTTGGAGGCCCCACTCCGCTTGTGTCCT...ACATAGCAACTCATACCAGGAGTGAGCAGCCACACATGGTGGCCACAATATTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR TCA 90 bp | TGGCTGGCCACCTTTCAGGGTTTCTGCTCTAATATTGTGGCCACCATGTGTGGCAGAGGCCAGCCAAGTTaGAAGTACAGAGATGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: WLATFQGFCSNIVATMCGRGQPS*KYRDGY Trigger: GTAGCCATCTCTGTACTTTCAACTTGGCTGGCCTCT...GCCACACATGGTGGCCACAATATTAGAGCAGAAACCCTGAAAGGTGGCCAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR TCA 90 bp | TGTGGCCACCATGTGTGGCTGCTCACTCCTGGTATGAGTTGCTATGTAAACCAACCATCTGGACTCGGATaGTTCGGCAATCAGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: CGHHVWLLTPGMSCYVNQPSGLG*FGNQRT Trigger: GGTCCTCTGATTGCCGAATCATCCGAGTCCAGATGG...TTGGTTTACATAGCAACTCATACCAGGAGTGAGCAGCCACACATGGTGGCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCAGTCCCACAAATCTGGCACAGGCTaGAAAAGACTCGGAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EVEARCRYPTWLRGHQSHKSGTG*KRLGGC Trigger: ACAGCCTCCGAGTCTTTTCCAGCCTGTGCCAGATTT...GTGGGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCAGTCCCACTTGAAAGTACAGAGATaGCTACCCCTGTGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EVEARCRYPTWLRGHQSHLKVQR*LPLWSS Trigger: AGAGGACCACAGGGGTAGCCATCTCTGTACTTTCAA...GTGGGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR TCA 90 bp | TGTGGCCACCATGTGTGGCTGCTCACTCCTGGTATGAGTTGCTATGTAAACCAATCCGCTTGTCAAAATTaGTGTAGCCATTCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CGHHVWLLTPGMSCYVNQSACQN*CSHSPA Trigger: AGCTGGAGAATGGCTACATCAATTTTGACAAGCGGA...TTGGTTTACATAGCAACTCATACCAGGAGTGAGCAGCCACACATGGTGGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCACCATGTGTGGCTGCTCACTCCTGGTATGAGTTGCTATGTAAACCAAACGACTAATAACACTTaGAGCTTTGTCCTGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CGHHVWLLTPGMSCYVNQTTNNT*SFVLAC Trigger: ACAAGCCAGGACAAAGCTCCAAGTGTTATTAGTCGT...TTGGTTTACATAGCAACTCATACCAGGAGTGAGCAGCCACACATGGTGGCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS TCA 90 bp | GGTCCCTTCTCCTGTGTTTCCACTCAACGGAGACCCACAGGAGGCTaGGCGACGGTGACCCCGGGAAGGCCTAGGGGAGGAGGCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPFSCVSTQRRPTGG*ATVTPGRPRGGGWR Trigger: CCTCCAGCCTCCTCCCCTAGGCCTTCCCGGGGTCACCGTCGCTCAGCCTCCTGTGGGTCTCCGTTGAGTGGAAACACAGGAGAAGGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000173284.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCCCCAGGCTCAGCCTCTAGGCCTTCCCTTGGCCTGTCACAGGCTGGCATTGGCCCCTCTCCAATaGAGGTGGCCCCCAAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: PLPQAQPLGLPLACHRLALAPLQ*RWPPRQ Trigger: CTGTCTTGGGGGCCACCTCAATTGGAGAGGGGCCAA...TGCCAGCCTGTGACAGGCCAAGGGAAGGCCTAGAGGCTGAGCCTGGGGCAGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CAA 90 bp | TGCAGGTATCCAACATGGTTACGTGGTCACCAGTCCCACGGGGCTGGGGCTGGGTTGGCCGAGGTGTCCTaGCAGCGGGGGAGTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: CRYPTWLRGHQSHGAGAGLAEVS*QRGSHW Trigger: CCAGTGACTCCCCCGCTGCAAGGACACCTCGGCCAA...CCCAGCCCCAGCCCCGTGGGACTGGTGACCACGTAACCATGTTGGATACCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS GCA 90 bp | CCGGTGGGTGGCCAGCAAGGCCGGAGTGAACATCATGTCAGCCCCTaGTGTCCTGGCATCCAAGAGGTGTCTGACCAGGGCCTCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PVGGQQGRSEHHVSP*CPGIQEVSDQGLQS Trigger: ACTCTGGAGGCCCTGGTCAGACACCTCTTGGATGCCAGGACAGCAGGGGCTGACATGATGTTCACTCCGGCCTTGCTGGCCACCCACCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CAA 90 bp | CTGCCCCAGGCTCAGCCTCTAGGCCTTCCCTTGGCCTGTCACAGGCTGGCATGTACCGCCCCCGCCACCTaGTTGAACTGTGTGACGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LPQAQPLGLPLACHRLACTAPAT*LNCVTV Trigger: TACCGTCACACAGTTCAACAAGGTGGCGGGGGCGGT...ACATGCCAGCCTGTGACAGGCCAAGGGAAGGCCTAGAGGCTGAGCCTGGGGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCCCCAGGCTCAGCCTCTAGGCCTTCCCTTGGCCTGTCACAGGCTGGCATTCTCCAGCTCATCCTaGGAGGCCGCATCCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: PLPQAQPLGLPLACHRLAFSSSS*EAASSI Trigger: GATGCTGGATGCGGCCTCCAAGGATGAGCTGGAGAA...TGCCAGCCTGTGACAGGCCAAGGGAAGGCCTAGAGGCTGAGCCTGGGGCAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS TCA 90 bp | GCGGAGTGGGGCCTCCAACAGAGCCCAGAACTTCCGTCCACTGTGTaGTCACTAGTGTTGGCCGAGGTGTCCTTGCAGCGGGGGAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: AEWGLQQSPELPSTV*SLVLAEVSLQRGSH Trigger: GTGACTCCCCCGCTGCAAGGACACCTCGGCCAACACTAGTGATCACACAGTGGACGGAAGTTCTGGGCTCTGTTGGAGGCCCCACTCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000173284.2 |
||
| CDS CCA 90 bp | GAGCGAGGTGGAGGCAAGGGAGCCAAGGGGTCAAGAGGCCTGTACTaGCGGCTTGTGACAGTAAAGGTCGCACCATCCTCCTCCTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ERGGGKGAKGSRGLY*RLVTVKVAPSSSSS Trigger: GGACGAGGAGGAGGATGGTGCGACCTTTACTGTCACAAGCCGCCAGTACAGGCCTCTTGACCCCTTGGCTCCCTTGCCTCCACCTCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS CCA 90 bp | CTGTGTGACGGTAGCTCGGACAGACGGGCAGAGGTGAGAATGTCCTaGCCGGTCTCTGTGACCCCAGAGGCCTCCCAAACACTGAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LCDGSSDRRAEVRMS*PVSVTPEASQTLRG Trigger: CCCTCTCAGTGTTTGGGAGGCCTCTGGGGTCACAGAGACCGGCCAGGACATTCTCACCTCTGCCCGTCTGTCCGAGCTACCGTCACACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS TCA 90 bp | CCTGTGGATAGGGCTGGACTGCAGAGCGGACACAACAGCATACACTaGGGAGAAGTTCCGAAGCAGGCGGCACTCCTCGGCCACACGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PVDRAGLQSGHNSIH*GEVPKQAALLGHTD Trigger: ATCCGTGTGGCCGAGGAGTGCCGCCTGCTTCGGAACTTCTCCTCAGTGTATGCTGTTGTGTCCGCTCTGCAGTCCAGCCCTATCCACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS TCA 90 bp | ACAGAGATGGCTACCCCTGTGGTCCTCTCTAGCTCACCGGGAGGATaGGATTCAAGGGCTTCCAGCCTGTCAGCCACAAGCCCAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: TEMATPVVLSSSPGG*DSRASSLSATSPNR Trigger: CCTGTTTGGGCTTGTGGCTGACAGGCTGGAAGCCCTTGAATCTCATCCTCCCGGTGAGCTAGAGAGGACCACAGGGGTAGCCATCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000234226.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTGACTTCACTGTCCCAGGGTGGCTGGCCACCTTTCAGGGTTTCTGCTCTACTCAAGCCGGTCAAGTaGACCCTTGACCTCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QVTSLSQGGWPPFRVSALLKPVK*TLDLRA Trigger: GGCTCTGAGGTCAAGGGTCAACTTGACCGGCTTGAG...TAGAGCAGAAACCCTGAAAGGTGGCCAGCCACCCTGGGACAGTGAAGTCACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS CCA 90 bp | TTAAGAAACAGTTCCGCATCTAGCAGGGTCAGCTGTTCGGCCAAGTaGTCAGCGAGGAACACCAGGACATCCGTGGGGTCAGCAGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LRNSSASSRVSCSAK*SARNTRTSVGSAGE Trigger: TTCCCCTGCTGACCCCACGGATGTCCTGGTGTTCCTCGCTGACCACTTGGCCGAACAGCTGACCCTGCTAGATGCGGAACTGTTTCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS TCA 90 bp | ACCCTGTCCGAAGCAAGAAGCTCTCAAGCCGGTCAAGTTGACCCTTaGCCTCAGAGCCAAAATCCTCAGGGTGAGAGGCCAGCCAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TLSEARSSQAGQVDP*PQSQNPQGERPAKL Trigger: CAACTTGGCTGGCCTCTCACCCTGAGGATTTTGGCTCTGAGGTCAAGGGTCAACTTGACCGGCTTGAGAGCTTCTTGCTTCGGACAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CAA 90 bp | ATTCCGCAGAGGTGGAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCGCCCCCGCCACCTTGTaGAACTGTGTGACGGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPQRWKLDAGIQHGYVVTAPATL*NCVTVA Trigger: AGCTACCGTCACACAGTTCAACAAGGTGGCGGGGGC...GGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTCTGCGGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CAA 90 bp | TGTGGCCACCATGTGTGGCTGCTCACTCCTGGTATGAGTTGCTATGTAAACCAAGACCTTGGGGCCTTCTaGGAGTGTGGCTCCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CGHHVWLLTPGMSCYVNQDLGAF*ECGSTG Trigger: CCCTGTGGAGCCACACTCCAAGAAGGCCCCAAGGTC...TTGGTTTACATAGCAACTCATACCAGGAGTGAGCAGCCACACATGGTGGCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CAA 90 bp | GAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCAGTCCCACGGGGCTATAACACTTGGAGCTTaGTCCTGGCTTGTCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EARCRYPTWLRGHQSHGAITLGA*SWLVTR Trigger: CCTGGTGACAAGCCAGGACAAAGCTCCAAGTGTTAT...AGCCCCGTGGGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGAAGCTAGATGCAGGTATCCAACATGGTTACGTGGTCACCAGTCCCACGAGAGGCCAGCCAAGTaGAAAGTACAGAGATGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: EVEARCRYPTWLRGHQSHERPAK*KVQRWL Trigger: TAGCCATCTCTGTACTTTCAACTTGGCTGGCCTCTC...GTGGGACTGGTGACCACGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS CCA 90 bp | AGCAGAATCACGATTGTTTTTCTTAAGGACACGACTAATAACACTTaGAGCTTTGTCCTGGCTTGTCACCAGGATGCTCTTGTAGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRITIVFLKDTTNNT*SFVLACHQDALVDA Trigger: AGCGTCTACAAGAGCATCCTGGTGACAAGCCAGGACAAAGCTCCAAGTGTTATTAGTCGTGTCCTTAAGAAAAACAATCGTGATTCTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000173284.2 |
||
| CDS CCA 72 bp | TTCCTGAGGCAGAGGGGCCGCTGTGGGAACCCGGGGTaGCAGCAGAGGGTCTTCTGCGCTGCCGCAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: FLRQRGRCGNPG*QQRVFCAAAGG Trigger: TCCTCCTGCGGCAGCGCAGAAGACCCTCTGCTGCCACCCCGGGTTCCCACAGCGGCCCCTCTGCCTCAGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000173284.2 |
||
| CDS TCA 72 bp | TGTCAGCCCCTGCTGTCCTGGCATCCAAGAGGTGTCTaGCCAGGGCCTCCAGAGTGCCAGCGCGGAGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: CQPLLSWHPRGV*PGPPECQRGAV Trigger: GACGGCTCCGCGCTGGCACTCTGGAGGCCCTGGTCAGACACCTCTTGGATGCCAGGACAGCAGGGGCTGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS CCA 72 bp | CCCCGACACTGGGCCGATCCCAGGACACAAGCGGAGTaGGGCCTCCAACAGAGCCCAGAACTTCCGTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: PRHWADPRTQAE*GLQQSPELPST Trigger: AGTGGACGGAAGTTCTGGGCTCTGTTGGAGGCCCCACTCCGCTTGTGTCCTGGGATCGGCCCAGTGTCGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000173284.2 |
||
| CDS TCA 72 bp | TCCTGTGTTTCCACTCAACGGAGACCCACAGGAGGCTaGGCGACGGTGACCCCGGGAAGGCCTAGGGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SCVSTQRRPTGG*ATVTPGRPRGG Trigger: TCCTCCCCTAGGCCTTCCCGGGGTCACCGTCGCTCAGCCTCCTGTGGGTCTCCGTTGAGTGGAAACACAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000173284.2 |
||
| CDS GCA 72 bp | GGCCAGCAAGGCCGGAGTGAACATCATGTCAGCCCCTaGTGTCCTGGCATCCAAGAGGTGTCTGACCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GQQGRSEHHVSP*CPGIQEVSDQG Trigger: GCCCTGGTCAGACACCTCTTGGATGCCAGGACAGCAGGGGCTGACATGATGTTCACTCCGGCCTTGCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
||
| CDS CCA 72 bp | CCGAGGTGTCCTTGCAGCGGGGGAGTCACTGGTCCCTaGTGGCTCCACTTCACAGGATACACGGTGACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PRCPCSGGVTGP*WLHFTGYTVTL Trigger: CAGAGTCACCGTGTATCCTGTGAAGTGGAGCCACCAGGGACCAGTGACTCCCCCGCTGCAAGGACACCTCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000173284.2 |
||
| CDS CCA 72 bp | GTGTTGGCCGAGGTGTCCTTGCAGCGGGGGAGTCACTaGTCCCTGGTGGCTCCACTTCACAGGATACACGGT | + |
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Preference number: 6 (lower is better) Translates to: VLAEVSLQRGSH*SLVAPLHRIHG Trigger: ACCGTGTATCCTGTGAAGTGGAGCCACCAGGGACCAGTGACTCCCCCGCTGCAAGGACACCTCGGCCAACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000173284.2 |
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| CDS CAA 72 bp | GCCCCCAAGACAGAGCTAACTACCGCCCCCGCCACCTaGTTGAACTGTGTGACGGTAGCTCGGACAGACGGG | + |
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Preference number: 6 (lower is better) Translates to: APKTELTTAPAT*LNCVTVARTDG Trigger: CCCGTCTGTCCGAGCTACCGTCACACAGTTCAACAAGGTGGCGGGGGCGGTAGTTAGCTCTGTCTTGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS TCA 72 bp | AGGGCTGGACTGCAGAGCGGACACAACAGCATACACTaGGGAGAAGTTCCGAAGCAGGCGGCACTCCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: RAGLQSGHNSIH*GEVPKQAALLG Trigger: GCCGAGGAGTGCCGCCTGCTTCGGAACTTCTCCTCAGTGTATGCTGTTGTGTCCGCTCTGCAGTCCAGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS GCA 72 bp | CCCCAGGCTGCCCGAAGCCTGTGGATAGGGCTGGACTaGAGAGCGGACACAACAGCATACACTGAGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: PQAARSLWIGLD*RADTTAYTEEK Trigger: CTTCTCCTCAGTGTATGCTGTTGTGTCCGCTCTGCAGTCCAGCCCTATCCACAGGCTTCGGGCAGCCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS CCA 72 bp | GGAGGCAAGGGAGCCAAGGGGTCAAGAGGCCTGTACTaGCGGCTTGTGACAGTAAAGGTCGCACCATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GGKGAKGSRGLY*RLVTVKVAPSS Trigger: GGAGGATGGTGCGACCTTTACTGTCACAAGCCGCCAGTACAGGCCTCTTGACCCCTTGGCTCCCTTGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS CCA 72 bp | CATCTGGACTCGGATGATTCGGCAATCAGAGGACCCTaGCCCAGATACCCCGCCCCCACATCCAGCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: HLDSDDSAIRGP*PRYPAPTSSTP Trigger: AGGAGTGCTGGATGTGGGGGCGGGGTATCTGGGCCAGGGTCCTCTGATTGCCGAATCATCCGAGTCCAGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000173284.2 |
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| CDS CAA 72 bp | CCCAAGACAGAGCTAACTACCGCCCCCGCCACCTTGTaGAACTGTGTGACGGTAGCTCGGACAGACGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PKTELTTAPATL*NCVTVARTDGQ Trigger: CTGCCCGTCTGTCCGAGCTACCGTCACACAGTTCAACAAGGTGGCGGGGGCGGTAGTTAGCTCTGTCTTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS TCA 72 bp | GCTACCCCTGTGGTCCTCTCTAGCTCACCGGGAGGATaGGATTCAAGGGCTTCCAGCCTGTCAGCCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: ATPVVLSSSPGG*DSRASSLSATS Trigger: GCTTGTGGCTGACAGGCTGGAAGCCCTTGAATCTCATCCTCCCGGTGAGCTAGAGAGGACCACAGGGGTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000234226.2 |
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| CDS TCA 72 bp | TGGTCTCACAGTCACCTCTCTTGGCCCCTCTCCAATTaGGGTGGCCCCCAAGACAGAGCTAACTACCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: WSHSHLSWPLSN*GGPQDRANYRP Trigger: GGGGCGGTAGTTAGCTCTGTCTTGGGGGCCACCTCAATTGGAGAGGGGCCAAGAGAGGTGACTGTGAGACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS CCA 72 bp | AGTTCCGCATCTAGCAGGGTCAGCTGTTCGGCCAAGTaGTCAGCGAGGAACACCAGGACATCCGTGGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SSASSRVSCSAK*SARNTRTSVGS Trigger: TGACCCCACGGATGTCCTGGTGTTCCTCGCTGACCACTTGGCCGAACAGCTGACCCTGCTAGATGCGGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS CCA 72 bp | GAGTCCAGAGATGAGACTGATGGCCACTTCATGTGCTaGGCGAGGCGAGTCAGCAGAGGTGCTGGGGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: ESRDETDGHFMC*ARRVSRGAGVP Trigger: TGGAACCCCAGCACCTCTGCTGACTCGCCTCGCCCAGCACATGAAGTGGCCATCAGTCTCATCTCTGGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000173284.2 |
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| CDS CAA 90 bp | TGCTGCATACCCTGTCCGAAGCAAGAAGCTCTCAAGCCGGTCAAGTaGACCCTTGACCTCAGAGCCAAAATCCTCAGGGTGAGAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: CCIPCPKQEALKPVK*TLDLRAKILRVRGQ Trigger: CTGGCCTCTCACCCTGAGGATTTTGGCTCTGAGGTCAAGGGTCAACTTGACCGGCTTGAGAGCTTCTTGCTTCGGACAGGGTATGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS CAA 72 bp | CCCTGTCCGAAGCAAGAAGCTCTCAAGCCGGTCAAGTaGACCCTTGACCTCAGAGCCAAAATCCTCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PCPKQEALKPVK*TLDLRAKILRV Trigger: CACCCTGAGGATTTTGGCTCTGAGGTCAAGGGTCAACTTGACCGGCTTGAGAGCTTCTTGCTTCGGACAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS TCA 72 bp | GAAGCAAGAAGCTCTCAAGCCGGTCAAGTTGACCCTTaGCCTCAGAGCCAAAATCCTCAGGGTGAGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: EARSSQAGQVDP*PQSQNPQGERP Trigger: TGGCCTCTCACCCTGAGGATTTTGGCTCTGAGGTCAAGGGTCAACTTGACCGGCTTGAGAGCTTCTTGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047503.16 |
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| CDS CAA 72 bp | CAGAGCCAAAATCCTCAGGGTGAGAGGCCAGCCAAGTaGAAAGTACAGAGATGGCTACCCCTGTGGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: QSQNPQGERPAK*KVQRWLPLWSS Trigger: AGAGGACCACAGGGGTAGCCATCTCTGTACTTTCAACTTGGCTGGCCTCTCACCCTGAGGATTTTGGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000234226.2 |
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| CDS TCA 72 bp | AGCCACGACATTCTTTCTTCCTCCGCTTGTCAAAATTaGTGTAGCCATTCTCCAGCTCATCCTTGGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: SHDILSSSACQN*CSHSPAHPWRP Trigger: CGGCCTCCAAGGATGAGCTGGAGAATGGCTACATCAATTTTGACAAGCGGAGGAAGAAAGAATGTCGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173284.2 |
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| CDS CAA 90 bp | AGCAGCTGCACCAGCTCGAACTCTGAAGCCACAGCAGAATCACGATaGTTTTTCTTAAGGACACGACTAATAACACTTGGAGCTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSCTSSNSEATAESR*FFLRTRLITLGALS Trigger: GGACAAAGCTCCAAGTGTTATTAGTCGTGTCCTTAAGAAAAACAATCGTGATTCTGCTGTGGCTTCAGAGTTCGAGCTGGTGCAGCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000173284.2 |
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| CDS CCA 72 bp | ACGATTGTTTTTCTTAAGGACACGACTAATAACACTTaGAGCTTTGTCCTGGCTTGTCACCAGGATGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: TIVFLKDTTNNT*SFVLACHQDAL Trigger: AAGAGCATCCTGGTGACAAGCCAGGACAAAGCTCCAAGTGTTATTAGTCGTGTCCTTAAGAAAAACAATCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000173284.2 |
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| CDS CAA 72 bp | ACCAGCTCGAACTCTGAAGCCACAGCAGAATCACGATaGTTTTTCTTAAGGACACGACTAATAACACTTGGA | + |
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Preference number: 6 (lower is better) Translates to: TSSNSEATAESR*FFLRTRLITLG Trigger: TCCAAGTGTTATTAGTCGTGTCCTTAAGAAAAACAATCGTGATTCTGCTGTGGCTTCAGAGTTCGAGCTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047503.16 ENSMUST00000173284.2 |
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