Pregenerated sensors for RGL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026482Ensembl transcript IDs: ENSMUST00000027760.14, ENSMUST00000111857.3, ENSMUST00000111859.8, ENSMUST00000149536.3
Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGTCCTGGAGGCAGCTGGTCCCCTTCAACAGGGTAAGAAGGGGTaGTCATCAGTCTGTGAGACTGGAAGCCTGGCAGGCAGACACAAC | + |
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Preference number: 1 (lower is better) Translates to: CVLEAAGPLQQGKKG*SSVCETGSLAGRHN Trigger: GTTGTGTCTGCCTGCCAGGCTTCCAGTCTCACAGACTGATGACCACCCCTTCTTACCCTGTTGAAGGGGACCAGCTGCCTCCAGGACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
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| 3UTR CCA 90 bp | GCCAGGCCCTCAGGATGGAAGCAATGGCATTCCGGATCACGGCCTTaGACTCGGGTGAACTTTGGCTTCCATCGTCTTCACAGTTTGGGC | + |
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Preference number: 1 (lower is better) Translates to: ARPSGWKQWHSGSRP*TRVNFGFHRLHSLG Trigger: GCCCAAACTGTGAAGACGATGGAAGCCAAAGTTCACCCGAGTCCAAGGCCGTGATCCGGAATGCCATTGCTTCCATCCTGAGGGCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
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| 3UTR TCA 90 bp | TCCAGCGTACCAGCTTTGATGGTCCTGATCTTGCAGGTCTCGTACTaGCTGACTGTGTGTCCTGGAGGCAGCTGGTCCCCTTCAACAGGG | + |
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Preference number: 1 (lower is better) Translates to: SSVPALMVLILQVSY*LTVCPGGSWSPSTG Trigger: CCCTGTTGAAGGGGACCAGCTGCCTCCAGGACACACAGTCAGTCAGTACGAGACCTGCAAGATCAGGACCATCAAAGCTGGTACGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
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| 3UTR TCA 90 bp | CAGGATGGAAGCAATGGCATTCCGGATCACGGCCTTGGACTCGGGTaGACTTTGGCTTCCATCGTCTTCACAGTTTGGGCCTGTCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: QDGSNGIPDHGLGLG*TLASIVFTVWACQV Trigger: AACCTGACAGGCCCAAACTGTGAAGACGATGGAAGCCAAAGTTCACCCGAGTCCAAGGCCGTGATCCGGAATGCCATTGCTTCCATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
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| 3UTR GCA 90 bp | GGCCCACAGCTAAAGATGGCAAACGACCGGATGTACACTGCTACATaGAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: GPQLKMANDRMYTAT*KGNQRVVEWSKTEE Trigger: CTCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTGTACATCCGGTCGTTTGCCATCTTTAGCTGTGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR TCA 90 bp | AGAAAGAAGAGCGCGACTCTTCCCTTCTATAAGGGTGCACTGCTGTaGGAAAGGACAGAGACGGCAGTCGCAGTCTCCTTTCTCTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: RKKSATLPFYKGALL*ERTETAVAVSFLSL Trigger: CAGGGAGAGAAAGGAGACTGCGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGAAGGGAAGAGTCGCGCTCTTCTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR GCA 90 bp | GCAGAGACCACTGACCCATCCGAACCTTTCCATGGTGGCCTTTCATaGAGCCTATGGCCATGTCAATCTCTGCTGTTTGGTCATCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: AETTDPSEPFHGGLS*SLWPCQSLLFGHLV Trigger: CACCAGATGACCAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAAGGTTCGGATGGGTCAGTGGTCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR CCA 90 bp | CAAACGACCGGATGTACACTGCTACATGCAAAGGCAATCAGAGGGTaGTGGAGTGGTCCAAGACAGAGGAGAGTCCAGAGGAGTTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: QTTGCTLLHAKAIRG*WSGPRQRRVQRSCC Trigger: ACAGCAACTCCTCTGGACTCTCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTGTACATCCGGTCGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR CCA 90 bp | GAAGCAATGGCATTCCGGATCACGGCCTTGGACTCGGGTGAACTTTaGCTTCCATCGTCTTCACAGTTTGGGCCTGTCAGGTTTCCATAC | + |
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Preference number: 1 (lower is better) Translates to: EAMAFRITALDSGEL*LPSSSQFGPVRFPY Trigger: GTATGGAAACCTGACAGGCCCAAACTGTGAAGACGATGGAAGCCAAAGTTCACCCGAGTCCAAGGCCGTGATCCGGAATGCCATTGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
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| 3UTR GCA 90 bp | AGAGGGTGGTGGAGTGGTCCAAGACAGAGGAGAGTCCAGAGGAGTTaGTGTGCTTCTGCGCTTTCTTCTCTGGCTGAAAAGTTATGGAAG | + |
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Preference number: 1 (lower is better) Translates to: RGWWSGPRQRRVQRS*CASALSSLAEKLWK Trigger: CTTCCATAACTTTTCAGCCAGAGAAGAAAGCGCAGAAGCACAGCAACTCCTCTGGACTCTCCTCTGTCTTGGACCACTCCACCACCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR CCA 90 bp | ACTGACCCATCCGAACCTTTCCATGGTGGCCTTTCATGCAGCCTATaGCCATGTCAATCTCTGCTGTTTGGTCATCTGGTGGCACATGAC | + |
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Preference number: 1 (lower is better) Translates to: TDPSEPFHGGLSCSL*PCQSLLFGHLVAHD Trigger: GTCATGTGCCACCAGATGACCAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAAGGTTCGGATGGGTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR CCA 90 bp | TATAAATATCTGTCGCTTTCACCAATGATGCTCAACACTGGGTGGTaGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: YKYLSLSPMMLNTGW*LASPWLLLSLTLPW Trigger: CCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTGAGCATCATTGGTGAAAGCGACAGATATTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| 3UTR CCA 90 bp | AGGAGTTGCTGTGCTTCTGCGCTTTCTTCTCTGGCTGAAAAGTTATaGAAGACCGAGGCTACCTGTGTGGTAATGATTGTGGTGCGTTCC | + |
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Preference number: 1 (lower is better) Translates to: RSCCASALSSLAEKL*KTEATCVVMIVVRS Trigger: GGAACGCACCACAATCATTACCACACAGGTAGCCTCGGTCTTCCATAACTTTTCAGCCAGAGAAGAAAGCGCAGAAGCACAGCAACTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR TCA 90 bp | GAGAGTCCAGAGGAGTTGCTGTGCTTCTGCGCTTTCTTCTCTGGCTaGAAAGTTATGGAAGACCGAGGCTACCTGTGTGGTAATGATTGT | + |
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Preference number: 1 (lower is better) Translates to: ESPEELLCFCAFFSG*KVMEDRGYLCGNDC Trigger: ACAATCATTACCACACAGGTAGCCTCGGTCTTCCATAACTTTTCAGCCAGAGAAGAAAGCGCAGAAGCACAGCAACTCCTCTGGACTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR GCA 90 bp | CTTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTaGTGTTTGGTCATCTGGTGGCACATGACTGAGAAAGGAATTCTC | + |
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Preference number: 1 (lower is better) Translates to: LSMVAFHAAYGHVNL*CLVIWWHMTEKGIL Trigger: GAGAATTCCTTTCTCAGTCATGTGCCACCAGATGACCAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR CCA 90 bp | CATCAGTCTGTGAGACTGGAAGCCTGGCAGGCAGACACAACAGCATaGGAGAATCTGAACTCGATCTTCACTAGCATAACGATGTTTACA | + |
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Preference number: 1 (lower is better) Translates to: HQSVRLEAWQADTTA*ENLNSIFTSITMFT Trigger: TGTAAACATCGTTATGCTAGTGAAGATCGAGTTCAGATTCTCCCATGCTGTTGTGTCTGCCTGCCAGGCTTCCAGTCTCACAGACTGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
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| 3UTR TCA 90 bp | CTTTTCCATTCAGATCCCAGCATAGCGCAGATCGGAAGCACAGAATaGAACTGTTATTACAGACAAAACCCATCACTTACCAGCGCCACC | + |
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Preference number: 1 (lower is better) Translates to: LFHSDPSIAQIGSTE*NCYYRQNPSLTSAT Trigger: GGTGGCGCTGGTAAGTGATGGGTTTTGTCTGTAATAACAGTTTCATTCTGTGCTTCCGATCTGCGCTATGCTGGGATCTGAATGGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR GCA 90 bp | GGCTACCTGTGTGGTAATGATTGTGGTGCGTTCCTCAGGAGAGAATaGAGAAACACAACAGGGTTTCCAGGAATTGAAACAAGCTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: GYLCGNDCGAFLRRE*RNTTGFPGIETSLC Trigger: ACACAAGCTTGTTTCAATTCCTGGAAACCCTGTTGTGTTTCTGCATTCTCTCCTGAGGAACGCACCACAATCATTACCACACAGGTAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR TCA 90 bp | AGAACACTCCGCATTGGTAGTTCTAATTCTATTTACTTGGAAGTATaGGACCAGGTTCTTGGTCCCTTCTGTTTCCCTGTAAAAAGTGAC | + |
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Preference number: 1 (lower is better) Translates to: RTLRIGSSNSIYLEV*DQVLGPFCFPVKSD Trigger: GTCACTTTTTACAGGGAAACAGAAGGGACCAAGAACCTGGTCTCATACTTCCAAGTAAATAGAATTAGAACTACCAATGCGGAGTGTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR-3UTR TCA 90 bp | CACTGGTCAAGCCAGGCCCTCAGGATGGAAGCAATGGCATTCCGGATCACGGCCGTGGTCATCAGTCTGTaGGACTGGAAGCCTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: HWSSQALRMEAMAFRITAVVISL*DWKPGR Trigger: CCTGCCAGGCTTCCAGTCTCACAGACTGATGACCAC...GGCCGTGATCCGGAATGCCATTGCTTCCATCCTGAGGGCCTGGCTTGACCAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
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| 3UTR CAA 90 bp | CCAATGATGCTCAACACTGGGTGGTGGTTGGCGTCGCCATGGCTTTaGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTGTACTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: PMMLNTGWWLASPWL*LSLTLPWAVGVYCP Trigger: GGGACAGTACACTCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTGAGCATCATTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| 3UTR-3UTR CCA 90 bp | GTGACGGGGACCAGCAAGGCACACAGGCCTCAGATGCTCCAGCAGACTCCAGCACGAACCTTTCCATGGTaGCCTTTCATGCAGCCTATG | + |
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Preference number: 2 (lower is better) Translates to: VTGTSKAHRPQMLQQTPARTFPW*PFMQPM Trigger: CATAGGCTGCATGAAAGGCCACCATGGAAAGGTTCG...TGCTGGAGTCTGCTGGAGCATCTGAGGCCTGTGTGCCTTGCTGGTCCCCGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR-3UTR CCA 90 bp | CACACTGGTCAAGCCAGGCCCTCAGGATGGAAGCAATGGCATTCCGGATCACGGGTGAGACTGGAAGCCTaGCAGGCAGACACAACAGCA | + |
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Preference number: 2 (lower is better) Translates to: HTGQARPSGWKQWHSGSRVRLEA*QADTTA Trigger: TGCTGTTGTGTCTGCCTGCCAGGCTTCCAGTCTCAC...CCGTGATCCGGAATGCCATTGCTTCCATCCTGAGGGCCTGGCTTGACCAGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
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| 3UTR CAA 90 bp | CGGCCTTGGACTCGGGTGAACTTTGGCTTCCATCGTCTTCACAGTTaGGGCCTGTCAGGTTTCCATACCTGTCCAGCAGCAGCTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RPWTRVNFGFHRLHS*GLSGFHTCPAAAPA Trigger: TGCTGGAGCTGCTGCTGGACAGGTATGGAAACCTGACAGGCCCAAACTGTGAAGACGATGGAAGCCAAAGTTCACCCGAGTCCAAGGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
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| 3UTR CAA 90 bp | AGCCAGGCCCTCAGGATGGAAGCAATGGCATTCCGGATCACGGCCTaGGACTCGGGTGAACTTTGGCTTCCATCGTCTTCACAGTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: SQALRMEAMAFRITA*DSGELWLPSSSQFG Trigger: CCCAAACTGTGAAGACGATGGAAGCCAAAGTTCACCCGAGTCCAAGGCCGTGATCCGGAATGCCATTGCTTCCATCCTGAGGGCCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
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| 3UTR-3UTR CCA 90 bp | GTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGCAGTCTCCTTTCTCTCCCGCAATCAGAGGGTGGTaGAGTGGTCCAAGACAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VHCCEKGQRRQSQSPFSPAIRGW*SGPRQR Trigger: CCTCTGTCTTGGACCACTCCACCACCCTCTGATTGC...GGGAGAGAAAGGAGACTGCGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR-3UTR TCA 90 bp | CATTCCGGATCACGGCCTTGGACTCGGGTGAACTTTGGCTTCCATCGTCTTCACAGGTCTCGTACTGACTaGCTGTGTGTCCTGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: HSGSRPWTRVNFGFHRLHRSRTD*LCVLEA Trigger: TGCCTCCAGGACACACAGTCAGTCAGTACGAGACCT...GTGAAGACGATGGAAGCCAAAGTTCACCCGAGTCCAAGGCCGTGATCCGGAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
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| 3UTR-3UTR TCA 90 bp | TCACGGCCTTGGACTCGGGTGAACTTTGGCTTCCATCGTCTTCACAGTTTGGGCTTGCAGGTCTCGTACTaGCTGACTGTGTGTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: SRPWTRVNFGFHRLHSLGLQVSY*LTVCPG Trigger: TCCAGGACACACAGTCAGTCAGTACGAGACCTGCAA...GCCCAAACTGTGAAGACGATGGAAGCCAAAGTTCACCCGAGTCCAAGGCCGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
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| 3UTR CAA 90 bp | AAATATCTGTCGCTTTCACCAATGATGCTCAACACTGGGTGGTGGTaGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: KYLSLSPMMLNTGWW*ASPWLLLSLTLPWA Trigger: TGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTGAGCATCATTGGTGAAAGCGACAGATATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTCCCTTCTATAAGGGTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGGGCCATGTCAATCTCTaGTGTTTGGTCATCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LFPSIRVHCCEKGQRRQSGHVNL*CLVIWW Trigger: CCACCAGATGACCAAACAGCAGAGATTGACATGGCC...CGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGAAGGGAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR-3UTR CCA 90 bp | CACTGCTACATGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGAATCCGAACCTTTCCATaGTGGCCTTTCATGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: HCYMQRQSEGGGVVQDRGIRTFP*WPFMQP Trigger: AGGCTGCATGAAAGGCCACCATGGAAAGGTTCGGAT...TCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTCGTCGCCATGGCTTTTaGTCAGCCTCACTCTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GSLFGPLPQISELFLVFLRRHGF*SASLCL Trigger: AAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACG...AAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR-3UTR CCA 90 bp | TGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGAGAGTCCAGAGTGCTGTTTGGTCATCTaGTGGCACATGACTGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: CKGNQRVVEWSKTEESPECCLVI*WHMTEK Trigger: TTTCTCAGTCATGTGCCACCAGATGACCAAACAGCA...CTCTGGACTCTCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR-3UTR TCA 90 bp | CACTGCTACATGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGACTTGTAATACTGGCATaGAGAACACTCCGCATTGGT | + |
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Preference number: 2 (lower is better) Translates to: HCYMQRQSEGGGVVQDRGLVILA*RTLRIG Trigger: ACCAATGCGGAGTGTTCTTCATGCCAGTATTACAAG...TCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTGTTGAGTTCGCCGCGGTTAGTCAGTaGGAGACAGTTTCTGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: FGPLPQISELFLVFLVEFAAVSQ*ETVSEG Trigger: CCCCTCAGAAACTGTCTCCCACTGACTAACCGCGGC...GAACTCAACAAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR CAA 90 bp | ATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTaGGTCATCTGGTGGCACATGACTGAGAAAGGAATTCTCTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: MVAFHAAYGHVNLCC*VIWWHMTEKGILSL Trigger: AAGGGAGAGAATTCCTTTCTCAGTCATGTGCCACCAGATGACCAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTCTGGTGGCACATGACTaGGAAAGGAATTCTCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: GSLFGPLPQISELFLVFLLVAHD*ERNSLP Trigger: AGGGAGAGAATTCCTTTCTCAGTCATGTGCCACCAG...AAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCACATGGTCATAACATGTATGTCTTGTGTGCCACACCCTAAACCAGGCCAACTGGTGGCACATGACTaGGAAAGGAATTCTCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: EHMVITCMSCVPHPKPGQLVAHD*ERNSLP Trigger: AGGGAGAGAATTCCTTTCTCAGTCATGTGCCACCAG...TTGGCCTGGTTTAGGGTGTGGCACACAAGACATACATGTTATGACCATGTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTTCCCTTCTATAAGGGTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGAGAAATGTCTACACCTaGGGAAGAACTGCTCATAAG | + |
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Preference number: 2 (lower is better) Translates to: LFPSIRVHCCEKGQRRQSRNVYT*GRTAHK Trigger: CTTATGAGCAGTTCTTCCTCAGGTGTAGACATTTCT...CGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGAAGGGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTCCAGAGGAGTTGCTGTaGTTCTGCGCTTTCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: GSLFGPLPQISELFLVFLPEELL*FCAFFS Trigger: AGAGAAGAAAGCGCAGAAGCACAGCAACTCCTCTGG...AAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGTAAAGAAGGAAACAGGAGCCGCGGTTAGTCAGTGGGAGACAGTTTCTGAGAGAGTCCAGAGGAGTTaGTGTGCTTCTGCGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: KVKKETGAAVSQWETVSERVQRS*CASALS Trigger: AGAAAGCGCAGAAGCACAGCAACTCCTCTGGACTCT...CTCAGAAACTGTCTCCCACTGACTAACCGCGGCTCCTGTTTCCTTCTTTACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR-3UTR GCA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAACGTCGCCATGGCTTTTaGTCAGCCTCACTCTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: CTVLSAQLNSINICRFHQRRHGF*SASLCL Trigger: AAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACG...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTCGACCGGATGTACACTaGTACATGCAAAGGCAATCA | + |
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Preference number: 2 (lower is better) Translates to: GSLFGPLPQISELFLVFLRPDVH*YMQRQS Trigger: TGATTGCCTTTGCATGTAGCAGTGTACATCCGGTCG...AAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCACATGGTCATAACATGTATGTCTTGTGTGCCACACCCTAAACCAGGCCAACTTTCATGCAGCCTATaGCCATGTCAATCTCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: EHMVITCMSCVPHPKPGQLSCSL*PCQSLL Trigger: CAGCAGAGATTGACATGGCCATAGGCTGCATGAAAG...TTGGCCTGGTTTAGGGTGTGGCACACAAGACATACATGTTATGACCATGTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTAAAGAAGGAAACAGGAGCCGCGGTTAGTCAGTGGGAGACAGTTTCTGAGCTTTCATGCAGCCTATaGCCATGTCAATCTCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: KVKKETGAAVSQWETVSELSCSL*PCQSLL Trigger: CAGCAGAGATTGACATGGCCATAGGCTGCATGAAAG...CTCAGAAACTGTCTCCCACTGACTAACCGCGGCTCCTGTTTCCTTCTTTACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGCACATGGTCATAACATGTATGTCTTGTGTGCCACACCCTAAACCAGGCCAACTTGTAATACTGGCATaGAGAACACTCCGCATTGGT | + |
|
Preference number: 2 (lower is better) Translates to: EHMVITCMSCVPHPKPGQLVILA*RTLRIG Trigger: ACCAATGCGGAGTGTTCTTCATGCCAGTATTACAAG...TTGGCCTGGTTTAGGGTGTGGCACACAAGACATACATGTTATGACCATGTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGTAAAGAAGGAAACAGGAGCCGCGGTTAGTCAGTGGGAGACAGTTTCTGAGGCTTTCTTCTCTGGCTaGAAAGTTATGGAAGACCGA | + |
|
Preference number: 2 (lower is better) Translates to: KVKKETGAAVSQWETVSEAFFSG*KVMEDR Trigger: TCGGTCTTCCATAACTTTTCAGCCAGAGAAGAAAGC...CTCAGAAACTGTCTCCCACTGACTAACCGCGGCTCCTGTTTCCTTCTTTACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGCACATGGTCATAACATGTATGTCTTGTGTGCCACACCCTAAACCAGGCCAAATGTACACTGCTACATaGAAAGGCAATCAGAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: EHMVITCMSCVPHPKPGQMYTAT*KGNQRV Trigger: CACCCTCTGATTGCCTTTGCATGTAGCAGTGTACAT...TTGGCCTGGTTTAGGGTGTGGCACACAAGACATACATGTTATGACCATGTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTTCTATAAGGGTGCACTaGTGTGAGAAAGGACAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GSLFGPLPQISELFLVFLSIRVH*CEKGQR Trigger: TCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGA...AAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR CAA 90 bp | AGAATGTACAAGACAAGGGAATCTGATGACTTCCTGGCTCTCTCTTaGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: RMYKTRESDDFLALS*VHCHKSLSFSWCFL Trigger: CAAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCCAGGAAGTCATCAGATTCCCTTGTCTTGTACATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGGACAAAAATAAGAGCCTaGGCTTGTAATACTGGCATG | + |
|
Preference number: 2 (lower is better) Translates to: FPWWPFMQPMAMSISAVWTKIRA*ACNTGM Trigger: CATGCCAGTATTACAAGCCCAGGCTCTTATTTTTGT...CCAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAAAGGTAAACAGATGCTGTAGATGCGGAAAGACAAGCGTGCGAGCAGCTGGAACAAAAATAAGAGCCTaGGCTTGTAATACTGGCATG | + |
|
Preference number: 2 (lower is better) Translates to: QKVNRCCRCGKTSVRAAGTKIRA*ACNTGM Trigger: CATGCCAGTATTACAAGCCCAGGCTCTTATTTTTGT...TCCAGCTGCTCGCACGCTTGTCTTTCCGCATCTACAGCATCTGTTTACCTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111859.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTAAAGAAGGAAACAGGAGCCGCGGTTAGTCAGTGGGAGACAGTTTCTGAGCTGCGCTTTCTTCTCTaGCTGAAAAGTTATGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: KVKKETGAAVSQWETVSELRFLL*LKSYGR Trigger: TCTTCCATAACTTTTCAGCCAGAGAAGAAAGCGCAG...CTCAGAAACTGTCTCCCACTGACTAACCGCGGCTCCTGTTTCCTTCTTTACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTCTGCGCTTTCTTCTCTaGCTGAAAAGTTATGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: GSLFGPLPQISELFLVFLLRFLL*LKSYGR Trigger: TCTTCCATAACTTTTCAGCCAGAGAAGAAAGCGCAG...AAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR CCA 72 bp | CACACTGGTCAAGCCAGGCCCTCAGGATGGAAGCAATaGCATTCCGGATCACGGCCTTGGACTCGGGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: HTGQARPSGWKQ*HSGSRPWTRVN Trigger: GTTCACCCGAGTCCAAGGCCGTGATCCGGAATGCCATTGCTTCCATCCTGAGGGCCTGGCTTGACCAGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
||
| 3UTR CCA 72 bp | GCATTCCGGATCACGGCCTTGGACTCGGGTGAACTTTaGCTTCCATCGTCTTCACAGTTTGGGCCTGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: AFRITALDSGEL*LPSSSQFGPVR Trigger: CCTGACAGGCCCAAACTGTGAAGACGATGGAAGCCAAAGTTCACCCGAGTCCAAGGCCGTGATCCGGAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
||
| 3UTR TCA 72 bp | AGCAATGGCATTCCGGATCACGGCCTTGGACTCGGGTaGACTTTGGCTTCCATCGTCTTCACAGTTTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SNGIPDHGLGLG*TLASIVFTVWA Trigger: GGCCCAAACTGTGAAGACGATGGAAGCCAAAGTTCACCCGAGTCCAAGGCCGTGATCCGGAATGCCATTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
||
| 3UTR-3UTR CAA 90 bp | CAAAAGGTAAACAGATGCTGTAGATGCGGAAAGACAAGCGTGCGAGCAGCTGGAGCGTCGCCATGGCTTTaGCTCAGCCTCACTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QKVNRCCRCGKTSVRAAGASPWL*LSLTLP Trigger: AGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGC...TCCAGCTGCTCGCACGCTTGTCTTTCCGCATCTACAGCATCTGTTTACCTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111859.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTCCCTTCTATAAGGGTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGGAGAGTCCAGAGGAGTaGCTGTGCTTCTGCGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LFPSIRVHCCEKGQRRQSESPEE*LCFCAF Trigger: GAAAGCGCAGAAGCACAGCAACTCCTCTGGACTCTC...CGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGAAGGGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR TCA 72 bp | AGCGCGACTCTTCCCTTCTATAAGGGTGCACTGCTGTaGGAAAGGACAGAGACGGCAGTCGCAGTCTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SATLPFYKGALL*ERTETAVAVSF Trigger: AAAGGAGACTGCGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGAAGGGAAGAGTCGCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR GCA 72 bp | AGAAGAGCGCGACTCTTCCCTTCTATAAGGGTGCACTaGTGTGAGAAAGGACAGAGACGGCAGTCGCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: RRARLFPSIRVH*CEKGQRRQSQS Trigger: AGACTGCGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGAAGGGAAGAGTCGCGCTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR CCA 72 bp | TATCTGTCGCTTTCACCAATGATGCTCAACACTGGGTaGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: YLSLSPMMLNTG*WLASPWLLLSL Trigger: GAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTGAGCATCATTGGTGAAAGCGACAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| 3UTR CCA 72 bp | GGATGTACACTGCTACATGCAAAGGCAATCAGAGGGTaGTGGAGTGGTCCAAGACAGAGGAGAGTCCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GCTLLHAKAIRG*WSGPRQRRVQR Trigger: CCTCTGGACTCTCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTGTACATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR CCA 72 bp | AGAAGGGGTGGTCATCAGTCTGTGAGACTGGAAGCCTaGCAGGCAGACACAACAGCATGGGAGAATCTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RRGGHQSVRLEA*QADTTAWENLN Trigger: GTTCAGATTCTCCCATGCTGTTGTGTCTGCCTGCCAGGCTTCCAGTCTCACAGACTGATGACCACCCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
||
| 3UTR CCA 72 bp | TCAGGATGGAAGCAATGGCATTCCGGATCACGGCCTTaGACTCGGGTGAACTTTGGCTTCCATCGTCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SGWKQWHSGSRP*TRVNFGFHRLH Trigger: GTGAAGACGATGGAAGCCAAAGTTCACCCGAGTCCAAGGCCGTGATCCGGAATGCCATTGCTTCCATCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
||
| 3UTR TCA 72 bp | AAACCCATCACTTACCAGCGCCACCAGGAGAGTAAGTaGGAGGTGAGAAAGAAGAGCGCGACTCTTCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KPITYQRHQESK*EVRKKSATLPF Trigger: GAAGGGAAGAGTCGCGCTCTTCTTTCTCACCTCTCACTTACTCTCCTGGTGGCGCTGGTAAGTGATGGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR GCA 72 bp | CCCACAGCTAAAGATGGCAAACGACCGGATGTACACTaGTACATGCAAAGGCAATCAGAGGGTGGTGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PTAKDGKRPDVH*YMQRQSEGGGV Trigger: CACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTGTACATCCGGTCGTTTGCCATCTTTAGCTGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR CCA 72 bp | TGTACACTGCTACATGCAAAGGCAATCAGAGGGTGGTaGAGTGGTCCAAGACAGAGGAGAGTCCAGAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: CTLLHAKAIRGW*SGPRQRRVQRS Trigger: ACTCCTCTGGACTCTCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCATCGTCTTCACAGTTTGGGCCTGTCAGGTTTCCATACCTGTCCAGCAGCATCCAGCGTACCAGCTTaGATGGTCCTGATCTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FHRLHSLGLSGFHTCPAASSVPA*MVLILQ Trigger: CTGCAAGATCAGGACCATCAAAGCTGGTACGCTGGA...TGCTGCTGGACAGGTATGGAAACCTGACAGGCCCAAACTGTGAAGACGATGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
||
| 3UTR TCA 72 bp | TCACTTACCAGCGCCACCAGGAGAGTAAGTGAGAGGTaGGAAAGAAGAGCGCGACTCTTCCCTTCTATAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLTSATRRVSER*ERRARLFPSIR Trigger: CCTTATAGAAGGGAAGAGTCGCGCTCTTCTTTCTCACCTCTCACTTACTCTCCTGGTGGCGCTGGTAAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR GCA 72 bp | ACTGACCCATCCGAACCTTTCCATGGTGGCCTTTCATaGAGCCTATGGCCATGTCAATCTCTGCTGTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TDPSEPFHGGLS*SLWPCQSLLFG Trigger: ACCAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAAGGTTCGGATGGGTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR GCA 72 bp | CTAAAGATGGCAAACGACCGGATGTACACTGCTACATaGAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LKMANDRMYTAT*KGNQRVVEWSK Trigger: CTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTGTACATCCGGTCGTTTGCCATCTTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR CCA 72 bp | TCCGAACCTTTCCATGGTGGCCTTTCATGCAGCCTATaGCCATGTCAATCTCTGCTGTTTGGTCATCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SEPFHGGLSCSL*PCQSLLFGHLV Trigger: CACCAGATGACCAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAAGGTTCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR CCA 72 bp | TCCAGAGGAGTTGCTGTGCTTCTGCGCTTTCTTCTCTaGCTGAAAAGTTATGGAAGACCGAGGCTACCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SRGVAVLLRFLL*LKSYGRPRLPV Trigger: CACAGGTAGCCTCGGTCTTCCATAACTTTTCAGCCAGAGAAGAAAGCGCAGAAGCACAGCAACTCCTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTGCTACATGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGACAGGGTTTCCAGGAATaGAAACAAGCTTGTGTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: HCYMQRQSEGGGVVQDRGQGFQE*KQACVD Trigger: GTCAACACAAGCTTGTTTCAATTCCTGGAAACCCTG...TCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR GCA 72 bp | GTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTaGTGTTTGGTCATCTGGTGGCACATGACTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VAFHAAYGHVNL*CLVIWWHMTEK Trigger: TTTCTCAGTCATGTGCCACCAGATGACCAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR TCA 72 bp | ACAGAGACGGCAGTCGCAGTCTCCTTTCTCTCCCTGTaGCCTGAACACAGGAATGCTACTAAAGTAAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TETAVAVSFLSL*PEHRNATKVKK Trigger: CTTCTTTACTTTAGTAGCATTCCTGTGTTCAGGTCACAGGGAGAGAAAGGAGACTGCGACTGCCGTCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR-3UTR CAA 90 bp | GACTATTTTGTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTGCGTCGCCATGGCTTTaGCTCAGCCTCACTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: DYFVFTLRSKSISEPFILASPWL*LSLTLP Trigger: AGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGC...AAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATACAAAATAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| 3UTR TCA 72 bp | GGGGTTGCTGCTCAGAAATCTTTCACAGGCTTGAAATaGTTGCATGGAGTTGACTGCAGCAGAAATGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: GVAAQKSFTGLK*LHGVDCSRNVY Trigger: GTAGACATTTCTGCTGCAGTCAACTCCATGCAATCATTTCAAGCCTGTGAAAGATTTCTGAGCAGCAACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR GCA 72 bp | TGTGGTAATGATTGTGGTGCGTTCCTCAGGAGAGAATaGAGAAACACAACAGGGTTTCCAGGAATTGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: CGNDCGAFLRRE*RNTTGFPGIET Trigger: TGTTTCAATTCCTGGAAACCCTGTTGTGTTTCTGCATTCTCTCCTGAGGAACGCACCACAATCATTACCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR CCA 72 bp | GAAAGTGCTTCTTATACATGTCAGCTCCTTCATGTATaGCTTTTCCATTCAGATCCCAGCATAGCGCAGATC | + |
|
Preference number: 3 (lower is better) Translates to: ESASYTCQLLHV*LFHSDPSIAQI Trigger: GATCTGCGCTATGCTGGGATCTGAATGGAAAAGCCATACATGAAGGAGCTGACATGTATAAGAAGCACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR CCA 72 bp | AGAAAGGAATTCTCTCCCTTTACAAAAATAAGAGCCTaGGCTTGTAATACTGGCATGAAGAACACTCCGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RKEFSPFTKIRA*ACNTGMKNTPH Trigger: ATGCGGAGTGTTCTTCATGCCAGTATTACAAGCCCAGGCTCTTATTTTTGTAAAGGGAGAGAATTCCTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| 3UTR GCA 72 bp | TATCCTTTTAATGTCAAATTCACTTCCACTCTCCCCTaGACAGTGCTCTCTGCACAGCTGAATTCTATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: YPFNVKFTSTLP*TVLSAQLNSIN Trigger: ATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTGGAAGTGAATTTGACATTAAAAGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTGTGTCCATGGGTGTaGCGGGGCCCTCCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WLASPWLLLSLTLPWAVGVCPWV*RGPPQP Trigger: AGGCTGAGGAGGGCCCCGTCACACCCATGGACACAC...TCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | CAACACTGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCGCTGCGGACTTGGGCTaGTCTTTGGTGGGAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QHWVVVGVAMAFAQPHSAAADLG*SLVGVL Trigger: GAGCACTCCCACCAAAGAGCAGCCCAAGTCCGCAGC...GGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGGTCTCGTACTGACTaGCTGTGTGTCCTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WVVVGVAMAFAQPHSALGRSRTD*LCVLEA Trigger: TGCCTCCAGGACACACAGTCAGTCAGTACGAGACCT...GCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCCTCGCTGCTGAGTTTTaGGTTCCTTGCTCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WVVVGVAMAFAQPHSALGLAAEF*VPCSPG Trigger: TCCTGGGGAGCAAGGAACTCAAAACTCAGCAGCGAG...GCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CAACACTGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCGCCAGGCCCTCAGGATaGAAGCAATGGCATTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QHWVVVGVAMAFAQPHSAARPSG*KQWHSG Trigger: TCCGGAATGCCATTGCTTCCATCCTGAGGGCCTGGC...GGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CAACACTGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCAAGTCTTCCGCACACTaGTCAAGCCAGGCCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QHWVVVGVAMAFAQPHSAKSSAH*SSQALR Trigger: CCTGAGGGCCTGGCTTGACCAGTGTGCGGAAGACTT...GGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCCTGTGCTCTCCTCTCTaGGTCAGAGCCAGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: WVVVGVAMAFAQPHSALGLCSPL*VRARHH Trigger: ATGATGCCTGGCTCTGACCCAGAGAGGAGAGCACAG...GCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCTGGGCAAAGTCAGGCTaGTCCGACTGCGCAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WVVVGVAMAFAQPHSALGWAKSG*SDCATS Trigger: TGAAGTTGCGCAGTCGGACCAGCCTGACTTTGCCCA...GCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| 3UTR CAA 72 bp | CTCAACACTGGGTGGTGGTTGGCGTCGCCATGGCTTTaGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNTGWWLASPWL*LSLTLPWAVGV Trigger: CACTCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | GTGACGGGGACCAGCAAGGCACACAGGCCTCAGATGCTCCAGCAGACTCCAGCATTGCAGGTCTCGTACTaGCTGACTGTGTGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTGTSKAHRPQMLQQTPALQVSY*LTVCPG Trigger: TCCAGGACACACAGTCAGTCAGTACGAGACCTGCAA...TGCTGGAGTCTGCTGGAGCATCTGAGGCCTGTGTGCCTTGCTGGTCCCCGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGGCCTTGGACTCGGGTaGACTTTGGCTTCCATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: WLASPWLLLSLTLPWAVGGLGLG*TLASIV Trigger: GACGATGGAAGCCAAAGTTCACCCGAGTCCAAGGCC...TCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | CAACACTGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCGTTCGTGAATTCTGCTaGCCCTCCGCTCTCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QHWVVVGVAMAFAQPHSAVREFC*PSALQF Trigger: GAACTGGAGAGCGGAGGGTCAGCAGAATTCACGAAC...GGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | CAACACTGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCGAGTGCTCCCGGGGATaGTGTCAGACCCCAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: QHWVVVGVAMAFAQPHSAECSRG*CQTPEI Trigger: TATTTCTGGGGTCTGACATCATCCCCGGGAGCACTC...GGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCCTTTGTCCTCCGAGATaGCCTGCACCAGCTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: WVVVGVAMAFAQPHSALGLCPPR*PAPAHT Trigger: AGTATGAGCTGGTGCAGGTCATCTCGGAGGACAAAG...GCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | CAACACTGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTCTGGTCTGGGCCCATaGAGTAGCTGTTGCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QHWVVVGVAMAFAQPHSASGLGP*SSCCKQ Trigger: CTGCTTGCAACAGCTACTGCATGGGCCCAGACCAGA...GGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGATCAGGCTGGTCCGACTaGGCAACTTCACCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WLASPWLLLSLTLPWAVGSGWSD*ATSPAP Trigger: AGGAGCAGGTGAAGTTGCGCAGTCGGACCAGCCTGA...TCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | CAACACTGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCAGGGTGATCTTGCTGTaGCTGTTACTCCAGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QHWVVVGVAMAFAQPHSARVILL*LLLQQP Trigger: GGGCTGCTGGAGTAACAGGCACAGCAAGATCACCCT...GGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCCTCTGGGTCCGCTTCTaGTTTTCTTTCACGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVVVGVAMAFAQPHSALGLWVRF*FSFTLL Trigger: CAGCAGCGTGAAAGAAAACCAGAAGCGGACCCAGAG...GCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CAACACTGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCAGTTGCAGGCGCCTCTaGGTCCGCTTCTGGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QHWVVVGVAMAFAQPHSASCRRL*VRFWFS Trigger: AGAAAACCAGAAGCGGACCCAGAGGCGCCTGCAACT...GGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGCAGTCTCCTTTCTCTCCCACTTGGGCTGCTCTTTaGTGGGAGTGCTCCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHCCEKGQRRQSQSPFSPTWAAL*WECSRG Trigger: TCCCCGGGAGCACTCCCACCAAAGAGCAGCCCAAGT...GGGAGAGAAAGGAGACTGCGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CACTGCTACATGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGACCCCAGAGCTCCCACTaGCTGCGGACTTGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HCYMQRQSEGGGVVQDRGPQSSH*LRTWAA Trigger: AGCAGCCCAAGTCCGCAGCCAGTGGGAGCTCTGGGG...TCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCTTCGACATCGCTCTCTaGATCACAGCGGGGGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: WVVVGVAMAFAQPHSALGFDIAL*ITAGVL Trigger: TAAGACCCCCGCTGTGATCCAGAGAGCGATGTCGAA...GCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | GCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTGTACGAGTGCTCCCGGGGATaGTGTCAGACCCCAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: ASPWLLLSLTLPWAVGVYECSRG*CQTPEI Trigger: TATTTCTGGGGTCTGACATCATCCCCGGGAGCACTC...GTACACTCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCTCCCATATTCGAGCATaGTCATCCACCAGCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WVVVGVAMAFAQPHSALGSHIRA*SSTSQC Trigger: ACACTGGCTGGTGGATGATCATGCTCGAATATGGGA...GCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | GTGACGGGGACCAGCAAGGCACACAGGCCTCAGATGCTCCAGCAGACTCCAGCATCCCATATTCGAGCATaGTCATCCACCAGCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTGTSKAHRPQMLQQTPASHIRA*SSTSQC Trigger: ACACTGGCTGGTGGATGATCATGCTCGAATATGGGA...TGCTGGAGTCTGCTGGAGCATCTGAGGCCTGTGTGCCTTGCTGGTCCCCGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | GCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTGTACAGGGTGATCTTGCTGTaGCTGTTACTCCAGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASPWLLLSLTLPWAVGVYRVILL*LLLQQP Trigger: GGGCTGCTGGAGTAACAGGCACAGCAAGATCACCCT...GTACACTCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGACTCGGGTGAACTTTaGCTTCCATCGTCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GWWLASPWLLLSLTLPWADSGEL*LPSSSQ Trigger: CTGTGAAGACGATGGAAGCCAAAGTTCACCCGAGTC...TGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCGCAGTGCGGAAACGATaGCCCTCAAGGAGGAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: WVVVGVAMAFAQPHSALGAVRKR*PSRRKN Trigger: ATTTTTCCTCCTTGAGGGCCATCGTTTCCGCACTGC...GCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GTGACGGGGACCAGCAAGGCACACAGGCCTCAGATGCTCCAGCAGACTCCAGCATGCCTCTGGAACCACTaGATAAACTTCTGGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTGTSKAHRPQMLQQTPACLWNH*INFWSG Trigger: CCCAGACCAGAAGTTTATCCAGTGGTTCCAGAGGCA...TGCTGGAGTCTGCTGGAGCATCTGAGGCCTGTGTGCCTTGCTGGTCCCCGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCATGCCTCTGGAACCACTaGATAAACTTCTGGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GWWLASPWLLLSLTLPWACLWNH*INFWSG Trigger: CCCAGACCAGAAGTTTATCCAGTGGTTCCAGAGGCA...TGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGCGGGGGTCTTATCCTaGCTTGTCAGCATGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WLASPWLLLSLTLPWAVGAGVLS*LVSMML Trigger: GAGCATCATGCTGACAAGCCAGGATAAGACCCCCGC...TCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | GCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTGTACCTTCTGAGAAGTTCGTaGATTCTGCTGACCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASPWLLLSLTLPWAVGVYLLRSS*ILLTLR Trigger: GCGGAGGGTCAGCAGAATTCACGAACTTCTCAGAAG...GTACACTCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAACTCTGGCTCGCTGCTaGGTTTTGAGTTCCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WLASPWLLLSLTLPWAVGTLARC*VLSSLL Trigger: GAGCAAGGAACTCAAAACTCAGCAGCGAGCCAGAGT...TCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGGGTGTGTCCATGGGTGTaGCGGGGCCCTCCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FPWWPFMQPMAMSISAVWVCPWV*RGPPQP Trigger: AGGCTGAGGAGGGCCCCGTCACACCCATGGACACAC...CCAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | GGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCATCTGATAGAAGCTGCTaGCTCTGGAACCACTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: GWWLASPWLLLSLTLPWASDRSC*LWNHWI Trigger: TATCCAGTGGTTCCAGAGGCAGCAGCTTCTATCAGA...TGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCATCTCGCTCCTTTATTaGCCGCCTGTTGAATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WVVVGVAMAFAQPHSALGISLLY*PPVESG Trigger: TCCAGATTCAACAGGCGGCCAATAAAGGAGCGAGAT...GCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CAACACTGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCGACTCGGGTGAACTTTaGCTTCCATCGTCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QHWVVVGVAMAFAQPHSADSGEL*LPSSSQ Trigger: CTGTGAAGACGATGGAAGCCAAAGTTCACCCGAGTC...GGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGAGAGTCCAGAGGCCAGGCCCTCAGGATaGAAGCAATGGCATTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CKGNQRVVEWSKTEESPEARPSG*KQWHSG Trigger: TCCGGAATGCCATTGCTTCCATCCTGAGGGCCTGGC...CTCTGGACTCTCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CACTGCTACATGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGAACTTGGGCTGCTCTTTaGTGGGAGTGCTCCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HCYMQRQSEGGGVVQDRGTWAAL*WECSRG Trigger: TCCCCGGGAGCACTCCCACCAAAGAGCAGCCCAAGT...TCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTGTACTCCTCAGCCTCGGAGTaGTTTGATTCACAGGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASPWLLLSLTLPWAVGVYSSASE*FDSQDD Trigger: GTCGTCCTGTGAATCAAACCACTCCGAGGCTGAGGA...GTACACTCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCTCCACGTCCTGCTTTTaGAACTGTTCAAGAAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WVVVGVAMAFAQPHSALGSTSCF*NCSRRF Trigger: GAACCTTCTTGAACAGTTTCAAAAGCAGGACGTGGA...GCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGAGAGTCCAGAGGTTCGTGAATTCTGCTaGCCCTCCGCTCTCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CKGNQRVVEWSKTEESPEVREFC*PSALQF Trigger: GAACTGGAGAGCGGAGGGTCAGCAGAATTCACGAAC...CTCTGGACTCTCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | GCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTGTACGGAATTAGACTGCAGTaGGGAAACGATGGCCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASPWLLLSLTLPWAVGVYGIRLQ*GNDGPQ Trigger: TTGAGGGCCATCGTTTCCGCACTGCAGTCTAATTCC...GTACACTCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGAGAGTCCAGAGTCTGGTCTGGGCCCATaGAGTAGCTGTTGCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CKGNQRVVEWSKTEESPESGLGP*SSCCKQ Trigger: CTGCTTGCAACAGCTACTGCATGGGCCCAGACCAGA...CTCTGGACTCTCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCCTTCTATAAGGGTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGAGAGCTCCCACTGGCTaGGGACTTGGGCTGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFPSIRVHCCEKGQRRQSRAPTG*GLGLLF Trigger: AAAGAGCAGCCCAAGTCCGCAGCCAGTGGGAGCTCT...CGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGAAGGGAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTGGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTGTCCTGGAGGCAGCTaGTCCCCTTCAACCCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGSLFGPLPQISELFLVCPGGS*SPSTPS Trigger: GCTAGGGGTTGAAGGGGACCAGCTGCCTCCAGGACA...CACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCCAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGACTCGGGTGAACTTTaGCTTCCATCGTCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WLASPWLLLSLTLPWAVGDSGEL*LPSSSQ Trigger: CTGTGAAGACGATGGAAGCCAAAGTTCACCCGAGTC...TCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGCAGTCTCCTTTCTCTCCCTCAGGATGGAAGCAATaGCATTCCGGATCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VHCCEKGQRRQSQSPFSPSGWKQ*HSGSRP Trigger: AGGCCGTGATCCGGAATGCCATTGCTTCCATCCTGA...GGGAGAGAAAGGAGACTGCGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCCCCAGAGCTCCCACTaGCTGCGGACTTGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSPLHSALCTAEFYKYLSPQSSH*LRTWAA Trigger: AGCAGCCCAAGTCCGCAGCCAGTGGGAGCTCTGGGG...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| 3UTR CAA 72 bp | TCGCTTTCACCAATGATGCTCAACACTGGGTGGTGGTaGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSPMMLNTGWW*ASPWLLLSLTL Trigger: CAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTGAGCATCATTGGTGAAAGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | GCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTGTACTCTTCACCCCAGTCCTaGATCGAGCTCATTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASPWLLLSLTLPWAVGVYSSPQS*IELILA Trigger: AGCTAAAATGAGCTCGATTCAGGACTGGGGTGAAGA...GTACACTCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027760.14 |
||
| CDS-3UTR TCA 90 bp | CTCTTCCCTTCTATAAGGGTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGCTCGCTGCTGAGTTTTaGGTTCCTTGCTCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFPSIRVHCCEKGQRRQSLAAEF*VPCSPG Trigger: TCCTGGGGAGCAAGGAACTCAAAACTCAGCAGCGAG...CGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGAAGGGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGAGAGTCCAGAGACTCTGGCTCGCTGCTaGGTTTTGAGTTCCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CKGNQRVVEWSKTEESPETLARC*VLSSLL Trigger: GAGCAAGGAACTCAAAACTCAGCAGCGAGCCAGAGT...CTCTGGACTCTCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTGTGTGTCCATGGGTGTaGCGGGGCCCTCCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPLHSALCTAEFYKYLSLVCPWV*RGPPQP Trigger: AGGCTGAGGAGGGCCCCGTCACACCCATGGACACAC...AAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | CACTGCTACATGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGATCTTCACCCCAGTCCTaGATCGAGCTCTCCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HCYMQRQSEGGGVVQDRGSSPQS*IELSSV Trigger: GACAGAGGAGAGCTCGATTCAGGACTGGGGTGAAGA...TCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | GTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGCAGTCTCCTTTCTCTCCCCCATGCAGTAGCTGTTaGAAGCAGACTGTAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VHCCEKGQRRQSQSPFSPPCSSC*KQTVGA Trigger: AGCTCCTACAGTCTGCTTGCAACAGCTACTGCATGG...GGGAGAGAAAGGAGACTGCGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | GCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTGTACTCTGATAGAAGCTGCTaGCTCTGGAACCACTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: ASPWLLLSLTLPWAVGVYSDRSC*LWNHWI Trigger: TATCCAGTGGTTCCAGAGGCAGCAGCTTCTATCAGA...GTACACTCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | CACTGCTACATGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGATCCTCCGAGATGACCTaGACCAGCTCATACTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HCYMQRQSEGGGVVQDRGSSEMT*TSSYSS Trigger: CGAGGAGTATGAGCTGGTGCAGGTCATCTCGGAGGA...TCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTGTACATCTCGCTCCTTTATTaGCCGCCTGTTGAATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASPWLLLSLTLPWAVGVYISLLY*PPVESG Trigger: TCCAGATTCAACAGGCGGCCAATAAAGGAGCGAGAT...GTACACTCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CAACACTGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCATCGTCTTCACAGTTTaGGCCTGTCAGGTTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: QHWVVVGVAMAFAQPHSAIVFTV*ACQVSI Trigger: TATGGAAACCTGACAGGCCCAAACTGTGAAGACGAT...GGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTCCCCAGAGCTCCCACTaGCTGCGGACTTGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPLHSALCTAEFYKYLSLPQSSH*LRTWAA Trigger: AGCAGCCCAAGTCCGCAGCCAGTGGGAGCTCTGGGG...AAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGATTCGTGTCCATGGAATaGATGGAGGAACAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WLASPWLLLSLTLPWAVGFVSME*MEEQEE Trigger: CTCTTCCTGTTCCTCCATCCATTCCATGGACACGAA...TCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGTCAGGCTGGTCCGACTaGGCAACTTCACCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSMVAFHAAYGHVNLCCLSGWSD*ATSPAP Trigger: AGGAGCAGGTGAAGTTGCGCAGTCGGACCAGCCTGA...CAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGAAGTCTTCCGCACACTaGTCAAGCCAGGCCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSMVAFHAAYGHVNLCCLKSSAH*SSQALR Trigger: CCTGAGGGCCTGGCTTGACCAGTGTGCGGAAGACTT...CAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAGGTAAACAGATGCTGTAGATGCGGAAAGACAAGCGTGCGAGCAGCTGGAAAGTCTTCCGCACACTaGTCAAGCCAGGCCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QKVNRCCRCGKTSVRAAGKSSAH*SSQALR Trigger: CCTGAGGGCCTGGCTTGACCAGTGTGCGGAAGACTT...TCCAGCTGCTCGCACGCTTGTCTTTCCGCATCTACAGCATCTGTTTACCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCATGTAGGAGCTTTATCTaGGCAATGACTTCAAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GWWLASPWLLLSLTLPWACRSFI*AMTSNS Trigger: GGAATTTGAAGTCATTGCCCAGATAAAGCTCCTACA...TGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS-3UTR CCA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGACTTGGGCTGCTCTTTaGTGGGAGTGCTCCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSPLHSALCTAEFYKYLSTWAAL*WECSRG Trigger: TCCCCGGGAGCACTCCCACCAAAGAGCAGCCCAAGT...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| 3UTR CAA 72 bp | ACTCGGGTGAACTTTGGCTTCCATCGTCTTCACAGTTaGGGCCTGTCAGGTTTCCATACCTGTCCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TRVNFGFHRLHS*GLSGFHTCPAA Trigger: TGCTGCTGGACAGGTATGGAAACCTGACAGGCCCAAACTGTGAAGACGATGGAAGCCAAAGTTCACCCGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
||
| CDS-3UTR TCA 90 bp | AAGAAGGGGTGGTCATCAGTCTGTGAGACTGGAAGCCTGGCAGGCAGACACAACTTATTGGCCGCCTGTTaGATCTGGACTCTTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKGWSSVCETGSLAGRHNLLAAC*IWTLLR Trigger: CCTCAAAAGAGTCCAGATTCAACAGGCGGCCAATAA...GTTGTGTCTGCCTGCCAGGCTTCCAGTCTCACAGACTGATGACCACCCCTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
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| CDS-3UTR TCA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGGGCCTTGGACTCGGGTaGACTTTGGCTTCCATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSPLHSALCTAEFYKYLSGLGLG*TLASIV Trigger: GACGATGGAAGCCAAAGTTCACCCGAGTCCAAGGCC...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS-3UTR TCA 90 bp | CAAAAGGTAAACAGATGCTGTAGATGCGGAAAGACAAGCGTGCGAGCAGCTGGAGTTCGTGAATTCTGCTaGCCCTCCGCTCTCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QKVNRCCRCGKTSVRAAGVREFC*PSALQF Trigger: GAACTGGAGAGCGGAGGGTCAGCAGAATTCACGAAC...TCCAGCTGCTCGCACGCTTGTCTTTCCGCATCTACAGCATCTGTTTACCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111859.8 |
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| CDS-3UTR TCA 90 bp | GCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTGTACGCTTTATCTGGGCAATaGCTTCAAATTCCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASPWLLLSLTLPWAVGVYALSGQ*LQIPFF Trigger: GAAGAAGGGAATTTGAAGTCATTGCCCAGATAAAGC...GTACACTCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS-3UTR GCA 90 bp | CAAAAGGTAAACAGATGCTGTAGATGCGGAAAGACAAGCGTGCGAGCAGCTGGATCTGGTCTGGGCCCATaGAGTAGCTGTTGCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QKVNRCCRCGKTSVRAAGSGLGP*SSCCKQ Trigger: CTGCTTGCAACAGCTACTGCATGGGCCCAGACCAGA...TCCAGCTGCTCGCACGCTTGTCTTTCCGCATCTACAGCATCTGTTTACCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111859.8 |
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| CDS-3UTR GCA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGAGAGCTCCCACTGGCTaGGGACTTGGGCTGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSPLHSALCTAEFYKYLSRAPTG*GLGLLF Trigger: AAAGAGCAGCCCAAGTCCGCAGCCAGTGGGAGCTCT...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS-3UTR GCA 90 bp | AAAGTAAAGAAGGAAACAGGAGCCGCGGTTAGTCAGTGGGAGACAGTTTCTGAGAGAGCTCCCACTGGCTaGGGACTTGGGCTGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KVKKETGAAVSQWETVSERAPTG*GLGLLF Trigger: AAAGAGCAGCCCAAGTCCGCAGCCAGTGGGAGCTCT...CTCAGAAACTGTCTCCCACTGACTAACCGCGGCTCCTGTTTCCTTCTTTACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| CDS-3UTR GCA 90 bp | AAAGTAAAGAAGGAAACAGGAGCCGCGGTTAGTCAGTGGGAGACAGTTTCTGAGTCAGGCTGGTCCGACTaGGCAACTTCACCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KVKKETGAAVSQWETVSESGWSD*ATSPAP Trigger: AGGAGCAGGTGAAGTTGCGCAGTCGGACCAGCCTGA...CTCAGAAACTGTCTCCCACTGACTAACCGCGGCTCCTGTTTCCTTCTTTACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| CDS-3UTR CCA 90 bp | TTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGGAGTTGCAGGCGCCTCTaGGTCCGCTTCTGGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPWWPFMQPMAMSISAVWSCRRL*VRFWFS Trigger: AGAAAACCAGAAGCGGACCCAGAGGCGCCTGCAACT...CCAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| CDS-3UTR CCA 90 bp | GTTGCTGTGCTTCTGCGCTTTCTTCTCTGGCTGAAAAGTTATGGAAGACCGAGGTGGGCAAAGTCAGGCTaGTCCGACTGCGCAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VAVLLRFLLWLKSYGRPRWAKSG*SDCATS Trigger: TGAAGTTGCGCAGTCGGACCAGCCTGACTTTGCCCA...CCTCGGTCTTCCATAACTTTTCAGCCAGAGAAGAAAGCGCAGAAGCACAGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| CDS-3UTR TCA 90 bp | CTCTTCCCTTCTATAAGGGTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGTTATTGGCCGCCTGTTaGATCTGGACTCTTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFPSIRVHCCEKGQRRQSLLAAC*IWTLLR Trigger: CCTCAAAAGAGTCCAGATTCAACAGGCGGCCAATAA...CGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGAAGGGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| CDS-3UTR TCA 90 bp | GGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTAGGTCTCGTACTGACTaGCTGTGTGTCCTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSLFGPLPQISELFLVFLRSRTD*LCVLEA Trigger: TGCCTCCAGGACACACAGTCAGTCAGTACGAGACCT...AAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGTTGCAGGTCTCGTACTaGCTGACTGTGTGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSMVAFHAAYGHVNLCCLLQVSY*LTVCPG Trigger: TCCAGGACACACAGTCAGTCAGTACGAGACCTGCAA...CAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGCTTCTGAGAAGTTCGTaGATTCTGCTGACCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSMVAFHAAYGHVNLCCLLLRSS*ILLTLR Trigger: GCGGAGGGTCAGCAGAATTCACGAACTTCTCAGAAG...CAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTCCCTTCTATAAGGGTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGTGCCACGAGATCTTCTaGGAAGTTCGTGAATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFPSIRVHCCEKGQRRQSCHEIF*EVREFC Trigger: GCAGAATTCACGAACTTCTCAGAAGATCTCGTGGCA...CGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGAAGGGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTAAAGAAGGAAACAGGAGCCGCGGTTAGTCAGTGGGAGACAGTTTCTGAGCTCGCTGCTGAGTTTTaGGTTCCTTGCTCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KVKKETGAAVSQWETVSELAAEF*VPCSPG Trigger: TCCTGGGGAGCAAGGAACTCAAAACTCAGCAGCGAG...CTCAGAAACTGTCTCCCACTGACTAACCGCGGCTCCTGTTTCCTTCTTTACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | CCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACGGTCAGTCAGGAAGGTaGCCAGGTAAGGCACGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PCTVLSAQLNSINICRFHGQSGR*PGKARY Trigger: GTACCGTGCCTTACCTGGGCACCTTCCTGACTGACC...GTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTGGTCAGTCAGGAAGGTaGCCAGGTAAGGCACGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SPLHSALCTAEFYKYLSLGQSGR*PGKARY Trigger: GTACCGTGCCTTACCTGGGCACCTTCCTGACTGACC...AAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | CAAAAGGTAAACAGATGCTGTAGATGCGGAAAGACAAGCGTGCGAGCAGCTGGATCCTCTGATAGAAGCTaGTGCCTCTGGAACCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKVNRCCRCGKTSVRAAGSSDRS*CLWNHW Trigger: CCAGTGGTTCCAGAGGCAGCAGCTTCTATCAGAGGA...TCCAGCTGCTCGCACGCTTGTCTTTCCGCATCTACAGCATCTGTTTACCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGTCCTCCGAGATGACCTaGACCAGCTCATACTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HSPLHSALCTAEFYKYLSSSEMT*TSSYSS Trigger: CGAGGAGTATGAGCTGGTGCAGGTCATCTCGGAGGA...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTGTTGAGTTCTGTCCTGGAGGCAGCTaGTCCCCTTCAACCCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FGPLPQISELFLVFLVEFCPGGS*SPSTPS Trigger: GCTAGGGGTTGAAGGGGACCAGCTGCCTCCAGGACA...GAACTCAACAAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGTGCTTCTGCGCTTTCTTCTCTGGCTGAAAAGTTATGGAAGACCGAGGTCAGGATGGAAGCAATaGCATTCCGGATCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VAVLLRFLLWLKSYGRPRSGWKQ*HSGSRP Trigger: AGGCCGTGATCCGGAATGCCATTGCTTCCATCCTGA...CCTCGGTCTTCCATAACTTTTCAGCCAGAGAAGAAAGCGCAGAAGCACAGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGGCTCTGGGTCCGCTTCTaGTTTTCTTTCACGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPWWPFMQPMAMSISAVWLWVRF*FSFTLL Trigger: CAGCAGCGTGAAAGAAAACCAGAAGCGGACCCAGAG...CCAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGAGTTGCAGGCGCCTCTaGGTCCGCTTCTGGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSPLHSALCTAEFYKYLSSCRRL*VRFWFS Trigger: AGAAAACCAGAAGCGGACCCAGAGGCGCCTGCAACT...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CACTGCTACATGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGAAGGAATTCGTGTCCATaGAATGGATGGAGGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HCYMQRQSEGGGVVQDRGRNSCP*NGWRNR Trigger: CCTGTTCCTCCATCCATTCCATGGACACGAATTCCT...TCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGATTGTTGTTGCACGTTaGAGGGGAGGACAGGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSMVAFHAAYGHVNLCCLIVVAR*RGGQGV Trigger: AACCCCCTGTCCTCCCCTCCAACGTGCAACAACAAT...CAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGTGGGCAAAGTCAGGCTaGTCCGACTGCGCAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSPLHSALCTAEFYKYLSWAKSG*SDCATS Trigger: TGAAGTTGCGCAGTCGGACCAGCCTGACTTTGCCCA...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS-3UTR TCA 90 bp | TTCCATCGTCTTCACAGTTTGGGCCTGTCAGGTTTCCATACCTGTCCAGCAGCATCTTCACCCCAGTCCTaGATCGAGCTCATTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FHRLHSLGLSGFHTCPAASSPQS*IELILA Trigger: AGCTAAAATGAGCTCGATTCAGGACTGGGGTGAAGA...TGCTGCTGGACAGGTATGGAAACCTGACAGGCCCAAACTGTGAAGACGATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
||
| CDS-3UTR TCA 90 bp | TCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTAGGTCTCGTACTGACTaGCTGTGTGTCCTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLHSALCTAEFYKYLSLRSRTD*LCVLEA Trigger: TGCCTCCAGGACACACAGTCAGTCAGTACGAGACCT...AAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTGTTGAGTTCGGCCTTGGACTCGGGTaGACTTTGGCTTCCATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FGPLPQISELFLVFLVEFGLGLG*TLASIV Trigger: GACGATGGAAGCCAAAGTTCACCCGAGTCCAAGGCC...GAACTCAACAAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGAGAGTCCAGAGGCTTTATCTGGGCAATaGCTTCAAATTCCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CKGNQRVVEWSKTEESPEALSGQ*LQIPFF Trigger: GAAGAAGGGAATTTGAAGTCATTGCCCAGATAAAGC...CTCTGGACTCTCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCCTCCGAGATGACCTaGACCAGCTCATACTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SPLHSALCTAEFYKYLSLSSEMT*TSSYSS Trigger: CGAGGAGTATGAGCTGGTGCAGGTCATCTCGGAGGA...AAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTTGATGGTCCTGATCTTGCAGGTCTCGTACTGACTGACTGTGTGTCCTGGATCTCGCTCCTTTATTaGCCGCCTGTTGAATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFDGPDLAGLVLTDCVSWISLLY*PPVESG Trigger: TCCAGATTCAACAGGCGGCCAATAAAGGAGCGAGAT...CCAGGACACACAGTCAGTCAGTACGAGACCTGCAAGATCAGGACCATCAAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
||
| CDS-3UTR CCA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGATTGTTGTTGCACGTTaGAGGGGAGGACAGGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HSPLHSALCTAEFYKYLSIVVAR*RGGQGV Trigger: AACCCCCTGTCCTCCCCTCCAACGTGCAACAACAAT...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTATTGTTGTTGCACGTTaGAGGGGAGGACAGGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSLFGPLPQISELFLVFLIVVAR*RGGQGV Trigger: AACCCCCTGTCCTCCCCTCCAACGTGCAACAACAAT...AAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACGCGGGGGTCTTATCCTaGCTTGTCAGCATGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCTVLSAQLNSINICRFHAGVLS*LVSMML Trigger: GAGCATCATGCTGACAAGCCAGGATAAGACCCCCGC...GTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCTGGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTCCACGTCCTGCTTTTaGAACTGTTCAAGAAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPGSLFGPLPQISELFLVSTSCF*NCSRRF Trigger: GAACCTTCTTGAACAGTTTCAAAAGCAGGACGTGGA...CACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCCAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| CDS-3UTR TCA 90 bp | TCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTCTTCTGAGAAGTTCGTaGATTCTGCTGACCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLHSALCTAEFYKYLSLLLRSS*ILLTLR Trigger: GCGGAGGGTCAGCAGAATTCACGAACTTCTCAGAAG...AAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGGTGAGCGTATTAAACTaGGAGATGGTGGCACGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HSPLHSALCTAEFYKYLSVSVLN*EMVARI Trigger: GATCCGTGCCACCATCTCTCAGTTTAATACGCTCAC...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTCCTGGCTTGTCAGCATaGTGCTCTTGTACATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLFGPLPQISELFLVFLPGLSA*CSCTCC Trigger: GCAACATGTACAAGAGCATCATGCTGACAAGCCAGG...AAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCCTGGCTTGTCAGCATaGTGCTCTTGTACATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSPLHSALCTAEFYKYLSPGLSA*CSCTCC Trigger: GCAACATGTACAAGAGCATCATGCTGACAAGCCAGG...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGGGAATTAGACTGCAGTaGGGAAACGATGGCCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSPLHSALCTAEFYKYLSGIRLQ*GNDGPQ Trigger: TTGAGGGCCATCGTTTCCGCACTGCAGTCTAATTCC...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCCTTCTATAAGGGTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGGGTTTTCTTTCACGCTaGTGTCCAGGTTTGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LFPSIRVHCCEKGQRRQSGFLSR*CPGLQI Trigger: AATTTGCAAACCTGGACAGCAGCGTGAAAGAAAACC...CGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGAAGGGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAAGGTCAGTCAGGAAGGTaGCCAGGTAAGGCACGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CTVLSAQLNSINICRFHQGQSGR*PGKARY Trigger: GTACCGTGCCTTACCTGGGCACCTTCCTGACTGACC...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS-3UTR CCA 90 bp | ACAAAAATAAGAGCCTGGGCTTGTAATACTGGCATGAAGAACACTCCGCATTGGCTGTGCTCTCCTCTCTaGGTCAGAGCCAGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKIRAWACNTGMKNTPHWLCSPL*VRARHH Trigger: ATGATGCCTGGCTCTGACCCAGAGAGGAGAGCACAG...CCAATGCGGAGTGTTCTTCATGCCAGTATTACAAGCCCAGGCTCTTATTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| CDS-3UTR CCA 90 bp | AAAGTAAAGAAGGAAACAGGAGCCGCGGTTAGTCAGTGGGAGACAGTTTCTGAGTGCCTCTGGAACCACTaGATAAACTTCTGGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVKKETGAAVSQWETVSECLWNH*INFWSG Trigger: CCCAGACCAGAAGTTTATCCAGTGGTTCCAGAGGCA...CTCAGAAACTGTCTCCCACTGACTAACCGCGGCTCCTGTTTCCTTCTTTACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| CDS-3UTR CCA 90 bp | CTTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGAGAAGCTGCTGCCTCTaGAACCACTGGATAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSMVAFHAAYGHVNLCCLRSCCL*NHWINF Trigger: GAAGTTTATCCAGTGGTTCCAGAGGCAGCAGCTTCT...CAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| CDS-3UTR CCA 90 bp | GTTGCTGTGCTTCTGCGCTTTCTTCTCTGGCTGAAAAGTTATGGAAGACCGAGGTTCGTGTCCATGGAATaGATGGAGGAACAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VAVLLRFLLWLKSYGRPRFVSME*MEEQEE Trigger: CTCTTCCTGTTCCTCCATCCATTCCATGGACACGAA...CCTCGGTCTTCCATAACTTTTCAGCCAGAGAAGAAAGCGCAGAAGCACAGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGAGGAATTCGTGTCCATaGAATGGATGGAGGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSMVAFHAAYGHVNLCCLRNSCP*NGWRNR Trigger: CCTGTTCCTCCATCCATTCCATGGACACGAATTCCT...CAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACTTCGACATCGCTCTCTaGATCACAGCGGGGGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PCTVLSAQLNSINICRFHFDIAL*ITAGVL Trigger: TAAGACCCCCGCTGTGATCCAGAGAGCGATGTCGAA...GTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS-3UTR CCA 90 bp | TCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTTCGACATCGCTCTCTaGATCACAGCGGGGGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SPLHSALCTAEFYKYLSLFDIAL*ITAGVL Trigger: TAAGACCCCCGCTGTGATCCAGAGAGCGATGTCGAA...AAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| 3UTR CAA 72 bp | GGAGAGAATGCAGAAACACAACAGGGTTTCCAGGAATaGAAACAAGCTTGTGTTGACCCCAGGGGCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GENAETQQGFQE*KQACVDPRGIV Trigger: CACAATGCCCCTGGGGTCAACACAAGCTTGTTTCAATTCCTGGAAACCCTGTTGTGTTTCTGCATTCTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTTTATTGGCCGCCTGTTaGATCTGGACTCTTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSLFGPLPQISELFLVFLLLAAC*IWTLLR Trigger: CCTCAAAAGAGTCCAGATTCAACAGGCGGCCAATAA...AAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| CDS-3UTR TCA 90 bp | ACAAAAATAAGAGCCTGGGCTTGTAATACTGGCATGAAGAACACTCCGCATTGGACTCTGGCTCGCTGCTaGGTTTTGAGTTCCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKIRAWACNTGMKNTPHWTLARC*VLSSLL Trigger: GAGCAAGGAACTCAAAACTCAGCAGCGAGCCAGAGT...CCAATGCGGAGTGTTCTTCATGCCAGTATTACAAGCCCAGGCTCTTATTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCTGGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTCTTTTCTCGAAGTTaGTCAGTCCACCCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LPGSLFGPLPQISELFLVFFSRS*SVHPQC Trigger: ACATTGAGGGTGGACTGATCAACTTCGAGAAAAGAA...CACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCCAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAAGAGTGCTCCCGGGGATaGTGTCAGACCCCAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: CTVLSAQLNSINICRFHQECSRG*CQTPEI Trigger: TATTTCTGGGGTCTGACATCATCCCCGGGAGCACTC...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAAATAAGAGCCTGGGCTTGTAATACTGGCATGAAGAACACTCCGCATTGGCTTTGTCCTCCGAGATaGCCTGCACCAGCTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: TKIRAWACNTGMKNTPHWLCPPR*PAPAHT Trigger: AGTATGAGCTGGTGCAGGTCATCTCGGAGGACAAAG...CCAATGCGGAGTGTTCTTCATGCCAGTATTACAAGCCCAGGCTCTTATTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAACTGTGCTCTCCTCTCTaGGTCAGAGCCAGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: CTVLSAQLNSINICRFHQLCSPL*VRARHH Trigger: ATGATGCCTGGCTCTGACCCAGAGAGGAGAGCACAG...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACGCAGTGCGGAAACGATaGCCCTCAAGGAGGAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PCTVLSAQLNSINICRFHAVRKR*PSRRKN Trigger: ATTTTTCCTCCTTGAGGGCCATCGTTTCCGCACTGC...GTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTAGAAGCTGCTGCCTCTaGAACCACTGGATAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSLFGPLPQISELFLVFLRSCCL*NHWINF Trigger: GAAGTTTATCCAGTGGTTCCAGAGGCAGCAGCTTCT...AAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTGTTGAGTTCTCCTCAGCCTCGGAGTaGTTTGATTCACAGGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: FGPLPQISELFLVFLVEFSSASE*FDSQDD Trigger: GTCGTCCTGTGAATCAAACCACTCCGAGGCTGAGGA...GAACTCAACAAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAATTGCAGGTCTCGTACTaGCTGACTGTGTGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CTVLSAQLNSINICRFHQLQVSY*LTVCPG Trigger: TCCAGGACACACAGTCAGTCAGTACGAGACCTGCAA...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTGCCACGAGATCTTCTaGGAAGTTCGTGAATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLHSALCTAEFYKYLSLCHEIF*EVREFC Trigger: GCAGAATTCACGAACTTCTCAGAAGATCTCGTGGCA...AAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCTGATAGAAGCTGCTaGCTCTGGAACCACTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: SPLHSALCTAEFYKYLSLSDRSC*LWNHWI Trigger: TATCCAGTGGTTCCAGAGGCAGCAGCTTCTATCAGA...AAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAATCCTCTGATAGAAGCTaGTGCCTCTGGAACCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CTVLSAQLNSINICRFHQSSDRS*CLWNHW Trigger: CCAGTGGTTCCAGAGGCAGCAGCTTCTATCAGAGGA...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTATCGTCTTCACAGTTTaGGCCTGTCAGGTTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: GSLFGPLPQISELFLVFLIVFTV*ACQVSI Trigger: TATGGAAACCTGACAGGCCCAAACTGTGAAGACGAT...AAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTAGAAGCTGCTGCCTCTaGAACCACTGGATAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPLHSALCTAEFYKYLSLRSCCL*NHWINF Trigger: GAAGTTTATCCAGTGGTTCCAGAGGCAGCAGCTTCT...AAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTTCGTGTCCATGGAATaGATGGAGGAACAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLHSALCTAEFYKYLSLFVSME*MEEQEE Trigger: CTCTTCCTGTTCCTCCATCCATTCCATGGACACGAA...AAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACAGGAATTCGTGTCCATaGAATGGATGGAGGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCTVLSAQLNSINICRFHRNSCP*NGWRNR Trigger: CCTGTTCCTCCATCCATTCCATGGACACGAATTCCT...GTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAAGTGAGCGTATTAAACTaGGAGATGGTGGCACGGATC | + |
|
Preference number: 4 (lower is better) Translates to: CTVLSAQLNSINICRFHQVSVLN*EMVARI Trigger: GATCCGTGCCACCATCTCTCAGTTTAATACGCTCAC...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAACCTGGCTTGTCAGCATaGTGCTCTTGTACATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CTVLSAQLNSINICRFHQPGLSA*CSCTCC Trigger: GCAACATGTACAAGAGCATCATGCTGACAAGCCAGG...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAACCATGCAGTAGCTGTTaGAAGCAGACTGTAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CTVLSAQLNSINICRFHQPCSSC*KQTVGA Trigger: AGCTCCTACAGTCTGCTTGCAACAGCTACTGCATGG...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | GACTATTTTGTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTGCTGCGGACTTGGGCTaGTCTTTGGTGGGAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DYFVFTLRSKSISEPFILAADLG*SLVGVL Trigger: GAGCACTCCCACCAAAGAGCAGCCCAAGTCCGCAGC...AAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATACAAAATAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| 3UTR CAA 72 bp | TTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTaGGTCATCTGGTGGCACATGACTGAGAAAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: FHAAYGHVNLCC*VIWWHMTEKGI Trigger: AATTCCTTTCTCAGTCATGTGCCACCAGATGACCAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAAATAAGAGCCTGGGCTTGTAATACTGGCATGAAGAACACTCCGCATTGGTCCACGTCCTGCTTTTaGAACTGTTCAAGAAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKIRAWACNTGMKNTPHWSTSCF*NCSRRF Trigger: GAACCTTCTTGAACAGTTTCAAAAGCAGGACGTGGA...CCAATGCGGAGTGTTCTTCATGCCAGTATTACAAGCCCAGGCTCTTATTTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | CCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACGGTTTTCTTTCACGCTaGTGTCCAGGTTTGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: PCTVLSAQLNSINICRFHGFLSR*CPGLQI Trigger: AATTTGCAAACCTGGACAGCAGCGTGAAAGAAAACC...GTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTTTAATGTCAGCCAGGCCCTCAGGATaGAAGCAATGGCATTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VFTLRSKSISEPFILLMSARPSG*KQWHSG Trigger: TCCGGAATGCCATTGCTTCCATCCTGAGGGCCTGGC...TGACATTAAAAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGTGTAGGAGCTTTATCTaGGCAATGACTTCAAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSPLHSALCTAEFYKYLSCRSFI*AMTSNS Trigger: GGAATTTGAAGTCATTGCCCAGATAAAGCTCCTACA...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTGTTGAGTTCTTCTTTTCTCGAAGTTaGTCAGTCCACCCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: FGPLPQISELFLVFLVEFFFSRS*SVHPQC Trigger: ACATTGAGGGTGGACTGATCAACTTCGAGAAAAGAA...GAACTCAACAAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAAATCGTCTTCACAGTTTaGGCCTGTCAGGTTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: CTVLSAQLNSINICRFHQIVFTV*ACQVSI Trigger: TATGGAAACCTGACAGGCCCAAACTGTGAAGACGAT...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACTGTAGGAGCTTTATCTaGGCAATGACTTCAAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCTVLSAQLNSINICRFHCRSFI*AMTSNS Trigger: GGAATTTGAAGTCATTGCCCAGATAAAGCTCCTACA...GTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAATTCTTTTCTCGAAGTTaGTCAGTCCACCCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: CTVLSAQLNSINICRFHQFFSRS*SVHPQC Trigger: ACATTGAGGGTGGACTGATCAACTTCGAGAAAAGAA...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAAGCTTTATCTGGGCAATaGCTTCAAATTCCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTVLSAQLNSINICRFHQALSGQ*LQIPFF Trigger: GAAGAAGGGAATTTGAAGTCATTGCCCAGATAAAGC...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTTTAATGTCATCAGGATGGAAGCAATaGCATTCCGGATCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFTLRSKSISEPFILLMSSGWKQ*HSGSRP Trigger: AGGCCGTGATCCGGAATGCCATTGCTTCCATCCTGA...TGACATTAAAAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTTTAATGTCACTCTGGGTCCGCTTCTaGTTTTCTTTCACGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFTLRSKSISEPFILLMSLWVRF*FSFTLL Trigger: CAGCAGCGTGAAAGAAAACCAGAAGCGGACCCAGAG...TGACATTAAAAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GACTATTTTGTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTTCCTCAGCCTCGGAGTaGTTTGATTCACAGGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: DYFVFTLRSKSISEPFILSSASE*FDSQDD Trigger: GTCGTCCTGTGAATCAAACCACTCCGAGGCTGAGGA...AAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATACAAAATAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR TCA 90 bp | GACTATTTTGTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTGTGAGCGTATTAAACTaGGAGATGGTGGCACGGATC | + |
|
Preference number: 4 (lower is better) Translates to: DYFVFTLRSKSISEPFILVSVLN*EMVARI Trigger: GATCCGTGCCACCATCTCTCAGTTTAATACGCTCAC...AAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATACAAAATAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR GCA 90 bp | GTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTTTAATGTCACCATGCAGTAGCTGTTaGAAGCAGACTGTAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFTLRSKSISEPFILLMSPCSSC*KQTVGA Trigger: AGCTCCTACAGTCTGCTTGCAACAGCTACTGCATGG...TGACATTAAAAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CCA 90 bp | GACTATTTTGTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTGCAGTGCGGAAACGATaGCCCTCAAGGAGGAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: DYFVFTLRSKSISEPFILAVRKR*PSRRKN Trigger: ATTTTTCCTCCTTGAGGGCCATCGTTTCCGCACTGC...AAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATACAAAATAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS-3UTR TCA 90 bp | GACTATTTTGTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTTGCCACGAGATCTTCTaGGAAGTTCGTGAATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DYFVFTLRSKSISEPFILCHEIF*EVREFC Trigger: GCAGAATTCACGAACTTCTCAGAAGATCTCGTGGCA...AAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATACAAAATAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| 3UTR CAA 72 bp | TGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTGTaGAGTTCGTATGGCTATTTACATAACACAAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: CHKSLSFSWCFL*SSYGYLHNTNP Trigger: AGGGTTTGTGTTATGTAAATAGCCATACGAACTCAACAAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| CDS-3UTR GCA 90 bp | GACTATTTTGTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTGGTTTTCTTTCACGCTaGTGTCCAGGTTTGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: DYFVFTLRSKSISEPFILGFLSR*CPGLQI Trigger: AATTTGCAAACCTGGACAGCAGCGTGAAAGAAAACC...AAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATACAAAATAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS-3UTR CAA 90 bp | TGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCGACTTGGGCTGCTCTTaGGTGGGAGTGCTCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WVVVGVAMAFAQPHSALGDLGCS*VGVLPG Trigger: CCCCGGGAGCACTCCCACCAAAGAGCAGCCCAAGTC...GCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS-3UTR CAA 90 bp | GTGACGGGGACCAGCAAGGCACACAGGCCTCAGATGCTCCAGCAGACTCCAGCACCACTGGCTGCGGACTaGGGCTGCTCTTTGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VTGTSKAHRPQMLQQTPAPLAAD*GCSLVG Trigger: TCCCACCAAAGAGCAGCCCAAGTCCGCAGCCAGTGG...TGCTGGAGTCTGCTGGAGCATCTGAGGCCTGTGTGCCTTGCTGGTCCCCGTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
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| CDS CCA 90 bp | GCTCCCGGAAGTCTTCCGCACACTGGTCAAGCCAGGCCCTCAGGATaGAAGCAATGGCATTCCGGATCACGGCCTTGGACTCGGGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: APGSLPHTGQARPSG*KQWHSGSRPWTRVN Trigger: GTTCACCCGAGTCCAAGGCCGTGATCCGGAATGCCATTGCTTCCATCCTGAGGGCCTGGCTTGACCAGTGTGCGGAAGACTTCCGGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGACCACTGGCTGCGGACTaGGGCTGCTCTTTGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WLASPWLLLSLTLPWAVGPLAAD*GCSLVG Trigger: TCCCACCAAAGAGCAGCCCAAGTCCGCAGCCAGTGG...TCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS TCA 90 bp | TGGCTGCGGACTTGGGCTGCTCTTTGGTGGGAGTGCTCCCGGGGATaGTGTCAGACCCCAGAAATAGCAGGCTCAGCCTCTTCACCATGC | + |
|
Preference number: 5 (lower is better) Translates to: WLRTWAALWWECSRG*CQTPEIAGSASSPC Trigger: GCATGGTGAAGAGGCTGAGCCTGCTATTTCTGGGGTCTGACATCATCCCCGGGAGCACTCCCACCAAAGAGCAGCCCAAGTCCGCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS TCA 90 bp | GGCCCTCCTCAGCCTCGGAGTGGTTTGATTCACAGGACGACACACTaGCTGAGTCCATACTCTCCCCAGAGCTCCCACTGGCTGCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GPPQPRSGLIHRTTH*LSPYSPQSSHWLRT Trigger: AGTCCGCAGCCAGTGGGAGCTCTGGGGAGAGTATGGACTCAGTCAGTGTGTCGTCCTGTGAATCAAACCACTCCGAGGCTGAGGAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCGGGATCACTAGTTCTTaGTCCTCCGAGATGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WVVVGVAMAFAQPHSALGGITSS*SSEMTC Trigger: GCAGGTCATCTCGGAGGACAAAGAACTAGTGATCCC...GCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS TCA 90 bp | AGACGTTTGCAGAGTCCGGGATCACTAGTTCTTTGTCCTCCGAGATaGCCTGCACCAGCTCATACTCCTCGGCGGGGTCCGACTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RRLQSPGSLVLCPPR*PAPAHTPRRGPTPG Trigger: ACCTGGAGTCGGACCCCGCCGAGGAGTATGAGCTGGTGCAGGTCATCTCGGAGGACAAAGAACTAGTGATCCCGGACTCTGCAAACGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS GCA 90 bp | TTTGCAGAGTCCGGGATCACTAGTTCTTTGTCCTCCGAGATGACCTaGACCAGCTCATACTCCTCGGCGGGGTCCGACTCCAGGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FAESGITSSLSSEMT*TSSYSSAGSDSRLC Trigger: GCACAACCTGGAGTCGGACCCCGCCGAGGAGTATGAGCTGGTGCAGGTCATCTCGGAGGACAAAGAACTAGTGATCCCGGACTCTGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS CCA 90 bp | TCTGGTGTGTCCATGGGTGTGACGGGGCCCTCCTCAGCCTCGGAGTaGTTTGATTCACAGGACGACACACTGACTGAGTCCATACTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGVSMGVTGPSSASE*FDSQDDTLTESILS Trigger: GGAGAGTATGGACTCAGTCAGTGTGTCGTCCTGTGAATCAAACCACTCCGAGGCTGAGGAGGGCCCCGTCACACCCATGGACACACCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCATTCAGAGAGCTTCTTTaGGGGCTCATCTGGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GWWLASPWLLLSLTLPWAFRELL*GLIWCV Trigger: GACACACCAGATGAGCCCCAAAAGAAGCTCTCTGAA...TGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS TCA 90 bp | TCCAGCGTACCAGCTTTGATGGTCCTGATCTTGCAGGTCTCGTACTaGCTGACTGTGTGTCCTGGAGGCAGCTGGTCCCCTTCAACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSVPALMVLILQVSY*LTVCPGGSWSPSTP Trigger: AGGGGTTGAAGGGGACCAGCTGCCTCCAGGACACACAGTCAGTCAGTACGAGACCTGCAAGATCAGGACCATCAAAGCTGGTACGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS TCA 90 bp | TCCAGCGTACCAGCTTTGATGGTCCTGATCTTGCAGGTCTCGTACTaGCTGACTGTGTGTCCTGGAGGCAGCTGGTCCCCTTCAACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSVPALMVLILQVSY*LTVCPGGSWSPSTS Trigger: GGAGGTTGAAGGGGACCAGCTGCCTCCAGGACACACAGTCAGTCAGTACGAGACCTGCAAGATCAGGACCATCAAAGCTGGTACGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111857.3 |
||
| CDS-3UTR CAA 90 bp | TGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGACCAGGCATCATCTGTTaGAGGTACTCCAGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WLASPWLLLSLTLPWAVGPGIIC*RYSSSF Trigger: GAAGCTGCTGGAGTACCTCAAACAGATGATGCCTGG...TCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTGTACCCAGGCATCATCTGTTaGAGGTACTCCAGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASPWLLLSLTLPWAVGVYPGIIC*RYSSSF Trigger: GAAGCTGCTGGAGTACCTCAAACAGATGATGCCTGG...GTACACTCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTCCCTTCTATAAGGGTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGCATATCCTTCTGCAGTaGCAGGCGCCTCTGGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LFPSIRVHCCEKGQRRQSHILLQ*QAPLGP Trigger: CGGACCCAGAGGCGCCTGCAACTGCAGAAGGATATG...CGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGAAGGGAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CACTGCTACATGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGATTAGGGGAAGTGGTGTaGGCGTCGGCAGCGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HCYMQRQSEGGGVVQDRGLGEVV*ASAAAS Trigger: TGAAGCCGCTGCCGACGCCAACACCACTTCCCCTAA...TCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS CCA 90 bp | GTACCCTGCATCACACCCATATCCTTCTGCAGTTGCAGGCGCCTCTaGGTCCGCTTCTGGTTTTCTTTCACGCTGCTGTCCAGGTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPCITPISFCSCRRL*VRFWFSFTLLSRFA Trigger: TGCAAACCTGGACAGCAGCGTGAAAGAAAACCAGAAGCGGACCCAGAGGCGCCTGCAACTGCAGAAGGATATGGGTGTGATGCAGGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS CCA 90 bp | GGCAGTACTGTGGAGGTAATGGATGTCACGGAGACGGAGCGCTTGTaGATTTTAGGATTGTTGTTGCACGTTGGAGGGGAGGACAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSTVEVMDVTETERL*ILGLLLHVGGEDRG Trigger: CCCCCTGTCCTCCCCTCCAACGTGCAACAACAATCCTAAAATCCACAAGCGCTCCGTCTCCGTGACATCCATTACCTCCACAGTACTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTGTACCTGAAGGAGCTGGTGTaGAGAAGTCCATTGTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASPWLLLSLTLPWAVGVYLKELV*RSPLSE Trigger: TTCCGACAATGGACTTCTCAACACCAGCTCCTTCAG...GTACACTCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCCTTCTTTTCTCGAAGTaGATCAGTCCACCCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: WVVVGVAMAFAQPHSALGLLFSK*ISPPSM Trigger: CATTGAGGGTGGACTGATCAACTTCGAGAAAAGAAG...GCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGGCATATCCTTCTGCAGTaGCAGGCGCCTCTGGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: FPWWPFMQPMAMSISAVWHILLQ*QAPLGP Trigger: CGGACCCAGAGGCGCCTGCAACTGCAGAAGGATATG...CCAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGTTAGGGGAAGTGGTGTaGGCGTCGGCAGCGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSMVAFHAAYGHVNLCCLLGEVV*ASAAAS Trigger: TGAAGCCGCTGCCGACGCCAACACCACTTCCCCTAA...CAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGAGAGTCCAGAGCTGAAGGAGCTGGTGTaGAGAAGTCCATTGTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CKGNQRVVEWSKTEESPELKELV*RSPLSE Trigger: TTCCGACAATGGACTTCTCAACACCAGCTCCTTCAG...CTCTGGACTCTCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTGTACCTTCTTTTCTCGAAGTaGATCAGTCCACCCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ASPWLLLSLTLPWAVGVYLLFSK*ISPPSM Trigger: CATTGAGGGTGGACTGATCAACTTCGAGAAAAGAAG...GTACACTCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTGTTGAGTTCGACTTGGGCTGCTCTTaGGTGGGAGTGCTCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FGPLPQISELFLVFLVEFDLGCS*VGVLPG Trigger: CCCCGGGAGCACTCCCACCAAAGAGCAGCCCAAGTC...GAACTCAACAAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCCACTGGCTGCGGACTaGGGCTGCTCTTTGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PCTVLSAQLNSINICRFHPLAAD*GCSLVG Trigger: TCCCACCAAAGAGCAGCCCAAGTCCGCAGCCAGTGG...GTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS TCA 90 bp | CTCCCCAGGACGGTGCTGACAACACACTTGGTGAGCGTATTAAACTaGGAGATGGTGGCACGGATCGTAGGAGCCAAATGCTTGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPRTVLTTHLVSVLN*EMVARIVGAKCLFS Trigger: GGAAAACAAGCATTTGGCTCCTACGATCCGTGCCACCATCTCTCAGTTTAATACGCTCACCAAGTGTGTTGTCAGCACCGTCCTGGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGAAATCAAAGTTCACTaGGCTATTCATGGCGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GWWLASPWLLLSLTLPWAEIKVH*AIHGVK Trigger: TTTTACGCCATGAATAGCCAAGTGAACTTTGATTTC...TGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CAACACTGGGTGGTGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCCCAGGTTTGCAAATTTaGAAGTTCCTTCCTTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: QHWVVVGVAMAFAQPHSAPGLQI*KFLPSL Trigger: TAATGAAGGAAGGAACTTCAAAATTTGCAAACCTGG...GGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCACCACCCAGTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CACTGCTACATGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGAATTTTAGGATTGTTGTaGCACGTTGGAGGGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HCYMQRQSEGGGVVQDRGILGLL*HVGGED Trigger: GTCCTCCCCTCCAACGTGCAACAACAATCCTAAAAT...TCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGAGAGTCCAGAGTACATGTTGCCATTGTaGTCTTCTACACTGATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CKGNQRVVEWSKTEESPEYMLPL*SSTLMR Trigger: CCGCATCAGTGTAGAAGACAACAATGGCAACATGTA...CTCTGGACTCTCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TGGTTGGCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAATGCTCTTGTACATGTaGCCATTGTTGTCTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: WLASPWLLLSLTLPWAVGMLLYM*PLLSST Trigger: TGTAGAAGACAACAATGGCAACATGTACAAGAGCAT...TCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGCCAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS TCA 90 bp | GAGCTGGTGTTGAGAAGTCCATTGTCGGAATCCACGTCCTGCTTTTaGAACTGTTCAAGAAGGTTCTGTGCTCTCCTCTCTGGGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ELVLRSPLSESTSCF*NCSRRFCALLSGSE Trigger: CTCTGACCCAGAGAGGAGAGCACAGAACCTTCTTGAACAGTTTCAAAAGCAGGACGTGGATTCCGACAATGGACTTCTCAACACCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS CCA 90 bp | GTCCTGCTTTTGAAACTGTTCAAGAAGGTTCTGTGCTCTCCTCTCTaGGTCAGAGCCAGGCATCATCTGTTTGAGGTACTCCAGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLLLKLFKKVLCSPL*VRARHHLFEVLQQL Trigger: AAGCTGCTGGAGTACCTCAAACAGATGATGCCTGGCTCTGACCCAGAGAGGAGAGCACAGAACCTTCTTGAACAGTTTCAAAAGCAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS CCA 90 bp | GGGTTGATTAGGGACGACATCCCTGAGGAATTCGTGTCCATGGAATaGATGGAGGAACAGGAAGAGGAGGATTCAGAGAGCTTCTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLIRDDIPEEFVSME*MEEQEEEDSESFFW Trigger: CCAAAAGAAGCTCTCTGAATCCTCCTCTTCCTGTTCCTCCATCCATTCCATGGACACGAATTCCTCAGGGATGTCGTCCCTAATCAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTCCCTTCTATAAGGGTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGTTTATTGGCCGCCTGTaGAATCTGGACTCTTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LFPSIRVHCCEKGQRRQSFIGRL*NLDSFE Trigger: CTCAAAAGAGTCCAGATTCAACAGGCGGCCAATAAA...CGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGAAGGGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TGGACTCGGGTGAACTTTGGCTTCCATCGTCTTCACAGTTTGGGCCTGTCAGGTTTTATTGGCCGCCTGTaGAATCTGGACTCTTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: WTRVNFGFHRLHSLGLSGFIGRL*NLDSFE Trigger: CTCAAAAGAGTCCAGATTCAACAGGCGGCCAATAAA...ACCTGACAGGCCCAAACTGTGAAGACGATGGAAGCCAAAGTTCACCCGAGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149536.3 |
||
| CDS-3UTR CAA 90 bp | CTTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGCATCGTCTTCACAGTTaGGGCCTGTCAGGTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSMVAFHAAYGHVNLCCLHRLHS*GLSGFH Trigger: ATGGAAACCTGACAGGCCCAAACTGTGAAGACGATG...CAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCCAGGCATCATCTGTTaGAGGTACTCCAGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSPLHSALCTAEFYKYLSPGIIC*RYSSSF Trigger: GAAGCTGCTGGAGTACCTCAAACAGATGATGCCTGG...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGGCTGAAGGAGCTGGTGTaGAGAAGTCCATTGTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FPWWPFMQPMAMSISAVWLKELV*RSPLSE Trigger: TTCCGACAATGGACTTCTCAACACCAGCTCCTTCAG...CCAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GCGTCGCCATGGCTTTTGCTCAGCCTCACTCTGCCTTGGGCAGTAGGAGTGTACGAAATCAAAGTTCACTaGGCTATTCATGGCGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ASPWLLLSLTLPWAVGVYEIKVH*AIHGVK Trigger: TTTTACGCCATGAATAGCCAAGTGAACTTTGATTTC...GTACACTCCTACTGCCCAAGGCAGAGTGAGGCTGAGCAAAAGCCATGGCGACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS GCA 90 bp | GCAGTTGCAGGCGCCTCTGGGTCCGCTTCTGGTTTTCTTTCACGCTaGTGTCCAGGTTTGCAAATTTTGAAGTTCCTTCCTTCATTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: AVAGASGSASGFLSR*CPGLQILKFLPSLV Trigger: TACTAATGAAGGAAGGAACTTCAAAATTTGCAAACCTGGACAGCAGCGTGAAAGAAAACCAGAAGCGGACCCAGAGGCGCCTGCAACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CACTGCTACATGCAAAGGCAATCAGAGGGTGGTGGAGTGGTCCAAGACAGAGGAATCCACGTCCTGCTTTaGAAACTGTTCAAGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: HCYMQRQSEGGGVVQDRGIHVLL*KLFKKV Trigger: AACCTTCTTGAACAGTTTCAAAAGCAGGACGTGGAT...TCCTCTGTCTTGGACCACTCCACCACCCTCTGATTGCCTTTGCATGTAGCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGTTCAGAGAGCTTCTTTaGGGGCTCATCTGGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HSPLHSALCTAEFYKYLSFRELL*GLIWCV Trigger: GACACACCAGATGAGCCCCAAAAGAAGCTCTCTGAA...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCATCGTCTTCACAGTTaGGGCCTGTCAGGTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PCTVLSAQLNSINICRFHHRLHS*GLSGFH Trigger: ATGGAAACCTGACAGGCCCAAACTGTGAAGACGATG...GTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTCATCGTCTTCACAGTTaGGGCCTGTCAGGTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPLHSALCTAEFYKYLSLHRLHS*GLSGFH Trigger: ATGGAAACCTGACAGGCCCAAACTGTGAAGACGATG...AAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTGGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGATCCACGTCCTGCTTTaGAAACTGTTCAAGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LPGSLFGPLPQISELFLVIHVLL*KLFKKV Trigger: AACCTTCTTGAACAGTTTCAAAAGCAGGACGTGGAT...CACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCCAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GTTGCTGTGCTTCTGCGCTTTCTTCTCTGGCTGAAAAGTTATGGAAGACCGAGGCTTCTTTTCTCGAAGTaGATCAGTCCACCCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VAVLLRFLLWLKSYGRPRLLFSK*ISPPSM Trigger: CATTGAGGGTGGACTGATCAACTTCGAGAAAAGAAG...CCTCGGTCTTCCATAACTTTTCAGCCAGAGAAGAAAGCGCAGAAGCACAGCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GACTATTTTGTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTGACTTGGGCTGCTCTTaGGTGGGAGTGCTCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DYFVFTLRSKSISEPFILDLGCS*VGVLPG Trigger: CCCCGGGAGCACTCCCACCAAAGAGCAGCCCAAGTC...AAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATACAAAATAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTCCCTTCTATAAGGGTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGATGCTCTTGTACATGTaGCCATTGTTGTCTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: LFPSIRVHCCEKGQRRQSMLLYM*PLLSST Trigger: TGTAGAAGACAACAATGGCAACATGTACAAGAGCAT...CGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGAAGGGAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTGTTGAGTTCGGGATCACTAGTTCTTaGTCCTCCGAGATGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FGPLPQISELFLVFLVEFGITSS*SSEMTC Trigger: GCAGGTCATCTCGGAGGACAAAGAACTAGTGATCCC...GAACTCAACAAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS GCA 90 bp | AGCAGCCCAAGCCTTTTTCAACCGATAGATGGAATTAGACTGCAGTaGGGAAACGATGGCCCTCAAGGAGGAAAAATTCTTCAGGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSPSLFQPIDGIRLQ*GNDGPQGGKILQDS Trigger: AGAATCCTGAAGAATTTTTCCTCCTTGAGGGCCATCGTTTCCGCACTGCAGTCTAATTCCATCTATCGGTTGAAAAAGGCTTGGGCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAATCCAGCGTACCAGCTTaGATGGTCCTGATCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CTVLSAQLNSINICRFHQSSVPA*MVLILQ Trigger: CTGCAAGATCAGGACCATCAAAGCTGGTACGCTGGA...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTCCCTTCTATAAGGGTGCACTGCTGTGAGAAAGGACAGAGACGGCAGTCGCCAGGTTTGCAAATTTaGAAGTTCCTTCCTTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: LFPSIRVHCCEKGQRRQSPGLQI*KFLPSL Trigger: TAATGAAGGAAGGAACTTCAAAATTTGCAAACCTGG...CGACTGCCGTCTCTGTCCTTTCTCACAGCAGTGCACCCTTATAGAAGGGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTCGCTGCTGTCCAGGTTaGCAAATTTTGAAGTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GSLFGPLPQISELFLVFLRCCPG*QILKFL Trigger: AAGGAACTTCAAAATTTGCAAACCTGGACAGCAGCG...AAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGTTGTGGATTTTAGGATaGTTGTTGCACGTTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSPLHSALCTAEFYKYLSLWILG*LLHVGG Trigger: CCCTCCAACGTGCAACAACAATCCTAAAATCCACAA...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CACTCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGTACATGTTGCCATTGTaGTCTTCTACACTGATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: HSPLHSALCTAEFYKYLSYMLPL*SSTLMR Trigger: CCGCATCAGTGTAGAAGACAACAATGGCAACATGTA...CGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACTTTATTGGCCGCCTGTaGAATCTGGACTCTTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PCTVLSAQLNSINICRFHFIGRL*NLDSFE Trigger: CTCAAAAGAGTCCAGATTCAACAGGCGGCCAATAAA...GTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTTTAATGTCACATATCCTTCTGCAGTaGCAGGCGCCTCTGGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: VFTLRSKSISEPFILLMSHILLQ*QAPLGP Trigger: CGGACCCAGAGGCGCCTGCAACTGCAGAAGGATATG...TGACATTAAAAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTTTAATGTCATTAGGGGAAGTGGTGTaGGCGTCGGCAGCGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VFTLRSKSISEPFILLMSLGEVV*ASAAAS Trigger: TGAAGCCGCTGCCGACGCCAACACCACTTCCCCTAA...TGACATTAAAAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACTTGTGGATTTTAGGATaGTTGTTGCACGTTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PCTVLSAQLNSINICRFHLWILG*LLHVGG Trigger: CCCTCCAACGTGCAACAACAATCCTAAAATCCACAA...GTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACATCCACGTCCTGCTTTaGAAACTGTTCAAGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PCTVLSAQLNSINICRFHIHVLL*KLFKKV Trigger: AACCTTCTTGAACAGTTTCAAAAGCAGGACGTGGAT...GTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCTCTCTTTGGTCCACTGCCACAAATCTCTGAGCTTTTCCTGGTGTTTCTTTTGTACATGTTGCCATaGTTGTCTTCTACACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GSLFGPLPQISELFLVFLLYMLP*LSSTLM Trigger: CATCAGTGTAGAAGACAACAATGGCAACATGTACAA...AAGAAACACCAGGAAAAGCTCAGAGATTTGTGGCAGTGGACCAAAGAGAGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GAGCACATGGTCATAACATGTATGTCTTGTGTGCCACACCCTAAACCAGGCCAATTGTACATGTTGCCATaGTTGTCTTCTACACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: EHMVITCMSCVPHPKPGQLYMLP*LSSTLM Trigger: CATCAGTGTAGAAGACAACAATGGCAACATGTACAA...TTGGCCTGGTTTAGGGTGTGGCACACAAGACATACATGTTATGACCATGTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCCATGGTGGCCTTTCATGCAGCCTATGGCCATGTCAATCTCTGCTGTTTGTCCACCGAGTTCTTTTaGCGTAAAATGAAATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSMVAFHAAYGHVNLCCLSTEFF*RKMKSK Trigger: CTTTGATTTCATTTTACGCAAAAAGAACTCGGTGGA...CAAACAGCAGAGATTGACATGGCCATAGGCTGCATGAAAGGCCACCATGGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTAAAGAAGGAAACAGGAGCCGCGGTTAGTCAGTGGGAGACAGTTTCTGAGCCAGGTTTGCAAATTTaGAAGTTCCTTCCTTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: KVKKETGAAVSQWETVSEPGLQI*KFLPSL Trigger: TAATGAAGGAAGGAACTTCAAAATTTGCAAACCTGG...CTCAGAAACTGTCTCCCACTGACTAACCGCGGCTCCTGTTTCCTTCTTTACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027760.14 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAACGCTGCTGTCCAGGTTaGCAAATTTTGAAGTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CTVLSAQLNSINICRFHQRCCPG*QILKFL Trigger: AAGGAACTTCAAAATTTGCAAACCTGGACAGCAGCG...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAATTGTGGATTTTAGGATaGTTGTTGCACGTTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CTVLSAQLNSINICRFHQLWILG*LLHVGG Trigger: CCCTCCAACGTGCAACAACAATCCTAAAATCCACAA...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACTTGTACATGTTGCCATaGTTGTCTTCTACACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PCTVLSAQLNSINICRFHLYMLP*LSSTLM Trigger: CATCAGTGTAGAAGACAACAATGGCAACATGTACAA...GTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTTTAATGTCATCCAGCGTACCAGCTTaGATGGTCCTGATCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VFTLRSKSISEPFILLMSSSVPA*MVLILQ Trigger: CTGCAAGATCAGGACCATCAAAGCTGGTACGCTGGA...TGACATTAAAAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCCCTGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCCACCGAGTTCTTTTaGCGTAAAATGAAATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPLHSALCTAEFYKYLSLSTEFF*RKMKSK Trigger: CTTTGATTTCATTTTACGCAAAAAGAACTCGGTGGA...AAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCAGGGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GACTATTTTGTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTTTCAGAGAGCTTCTTTaGGGGCTCATCTGGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DYFVFTLRSKSISEPFILFRELL*GLIWCV Trigger: GACACACCAGATGAGCCCCAAAAGAAGCTCTCTGAA...AAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATACAAAATAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GACTATTTTGTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTATTTTAGGATTGTTGTaGCACGTTGGAGGGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: DYFVFTLRSKSISEPFILILGLL*HVGGED Trigger: GTCCTCCCCTCCAACGTGCAACAACAATCCTAAAAT...AAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATACAAAATAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTTTAATGTCAATTTTAGGATTGTTGTaGCACGTTGGAGGGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VFTLRSKSISEPFILLMSILGLL*HVGGED Trigger: GTCCTCCCCTCCAACGTGCAACAACAATCCTAAAAT...TGACATTAAAAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | TGCACAGTGCTCTCTGCACAGCTGAATTCTATAAATATCTGTCGCTTTCACCAAGAAATCAAAGTTCACTaGGCTATTCATGGCGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CTVLSAQLNSINICRFHQEIKVH*AIHGVK Trigger: TTTTACGCCATGAATAGCCAAGTGAACTTTGATTTC...TTGGTGAAAGCGACAGATATTTATAGAATTCAGCTGTGCAGAGAGCACTGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GACTATTTTGTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTTACATGTTGCCATTGTaGTCTTCTACACTGATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: DYFVFTLRSKSISEPFILYMLPL*SSTLMR Trigger: CCGCATCAGTGTAGAAGACAACAATGGCAACATGTA...AAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATACAAAATAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GACTATTTTGTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTATGCTCTTGTACATGTaGCCATTGTTGTCTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: DYFVFTLRSKSISEPFILMLLYM*PLLSST Trigger: TGTAGAAGACAACAATGGCAACATGTACAAGAGCAT...AAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATACAAAATAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS-3UTR CAA 90 bp | GTATTCACTCTCAGATCTAAGAGCATCAGTGAACCTTTTATCCTTTTAATGTCATCCACCGAGTTCTTTTaGCGTAAAATGAAATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VFTLRSKSISEPFILLMSSTEFF*RKMKSK Trigger: CTTTGATTTCATTTTACGCAAAAAGAACTCGGTGGA...TGACATTAAAAGGATAAAAGGTTCACTGATGCTCTTAGATCTGAGAGTGAATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS GCA 72 bp | CTCTCCCCAGAGCTCCCACTGGCTGCGGACTTGGGCTaGTCTTTGGTGGGAGTGCTCCCGGGGATGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSPELPLAADLG*SLVGVLPGMMS Trigger: TGACATCATCCCCGGGAGCACTCCCACCAAAGAGCAGCCCAAGTCCGCAGCCAGTGGGAGCTCTGGGGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS GCA 72 bp | AGCTCATACTCCTCGGCGGGGTCCGACTCCAGGTTGTaGTTCGACATCGCTCTCTGGATCACAGCGGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSYSSAGSDSRL*FDIALWITAGV Trigger: GACCCCCGCTGTGATCCAGAGAGCGATGTCGAAGCACAACCTGGAGTCGGACCCCGCCGAGGAGTATGAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS CAA 72 bp | ACCAGCTCATACTCCTCGGCGGGGTCCGACTCCAGGTaGTGCTTCGACATCGCTCTCTGGATCACAGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSYSSAGSDSR*CFDIALWITAG Trigger: CCCCGCTGTGATCCAGAGAGCGATGTCGAAGCACAACCTGGAGTCGGACCCCGCCGAGGAGTATGAGCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS CAA 90 bp | CTGACTGAGTCCATACTCTCCCCAGAGCTCCCACTGGCTGCGGACTaGGGCTGCTCTTTGGTGGGAGTGCTCCCGGGGATGATGTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LTESILSPELPLAAD*GCSLVGVLPGMMSD Trigger: GTCTGACATCATCCCCGGGAGCACTCCCACCAAAGAGCAGCCCAAGTCCGCAGCCAGTGGGAGCTCTGGGGAGAGTATGGACTCAGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS CAA 90 bp | ATGACCTGCACCAGCTCATACTCCTCGGCGGGGTCCGACTCCAGGTaGTGCTTCGACATCGCTCTCTGGATCACAGCGGGGGTCTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: MTCTSSYSSAGSDSR*CFDIALWITAGVLS Trigger: GGATAAGACCCCCGCTGTGATCCAGAGAGCGATGTCGAAGCACAACCTGGAGTCGGACCCCGCCGAGGAGTATGAGCTGGTGCAGGTCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS TCA 72 bp | CAGAGTCCGGGATCACTAGTTCTTTGTCCTCCGAGATaGCCTGCACCAGCTCATACTCCTCGGCGGGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: QSPGSLVLCPPR*PAPAHTPRRGP Trigger: CGGACCCCGCCGAGGAGTATGAGCTGGTGCAGGTCATCTCGGAGGACAAAGAACTAGTGATCCCGGACTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS CCA 72 bp | TCCATGGGTGTGACGGGGCCCTCCTCAGCCTCGGAGTaGTTTGATTCACAGGACGACACACTGACTGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SMGVTGPSSASE*FDSQDDTLTES Trigger: GGACTCAGTCAGTGTGTCGTCCTGTGAATCAAACCACTCCGAGGCTGAGGAGGGCCCCGTCACACCCATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS TCA 72 bp | CAGCCTCGGAGTGGTTTGATTCACAGGACGACACACTaGCTGAGTCCATACTCTCCCCAGAGCTCCCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: QPRSGLIHRTTH*LSPYSPQSSHW Trigger: CCAGTGGGAGCTCTGGGGAGAGTATGGACTCAGTCAGTGTGTCGTCCTGTGAATCAAACCACTCCGAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS CAA 72 bp | TTCACCATGCTTTTCCGAGGCTTAGGGGAAGTGGTGTaGGCGTCGGCAGCGGCTTCAATCTCACACGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FTMLFRGLGEVV*ASAAASISHER Trigger: CCTCTCGTGTGAGATTGAAGCCGCTGCCGACGCCAACACCACTTCCCCTAAGCCTCGGAAAAGCATGGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS GCA 72 bp | ACGGTACCCTGCATCACACCCATATCCTTCTGCAGTTaGAGGCGCCTCTGGGTCCGCTTCTGGTTTTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: TVPCITPISFCS*RRLWVRFWFSF Trigger: GAAAGAAAACCAGAAGCGGACCCAGAGGCGCCTGCAACTGCAGAAGGATATGGGTGTGATGCAGGGTACCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS CCA 72 bp | ATCACACCCATATCCTTCTGCAGTTGCAGGCGCCTCTaGGTCCGCTTCTGGTTTTCTTTCACGCTGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ITPISFCSCRRL*VRFWFSFTLLS Trigger: GGACAGCAGCGTGAAAGAAAACCAGAAGCGGACCCAGAGGCGCCTGCAACTGCAGAAGGATATGGGTGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS CCA 72 bp | GAGGAACAGGAAGAGGAGGATTCAGAGAGCTTCTTTTaGGGCTCATCTGGTGTGTCCATGGGTGTGACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EEQEEEDSESFF*GSSGVSMGVTG Trigger: CCCCGTCACACCCATGGACACACCAGATGAGCCCCAAAAGAAGCTCTCTGAATCCTCCTCTTCCTGTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS CAA 72 bp | CACGGTACCCTGCATCACACCCATATCCTTCTGCAGTaGCAGGCGCCTCTGGGTCCGCTTCTGGTTTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: HGTLHHTHILLQ*QAPLGPLLVFF Trigger: AAAGAAAACCAGAAGCGGACCCAGAGGCGCCTGCAACTGCAGAAGGATATGGGTGTGATGCAGGGTACCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS CAA 90 bp | GGAGGCAGTACTGTGGAGGTAATGGATGTCACGGAGACGGAGCGCTaGTGGATTTTAGGATTGTTGTTGCACGTTGGAGGGGAGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GGSTVEVMDVTETER*WILGLLLHVGGEDR Trigger: CCTGTCCTCCCCTCCAACGTGCAACAACAATCCTAAAATCCACAAGCGCTCCGTCTCCGTGACATCCATTACCTCCACAGTACTGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS CCA 72 bp | TCCTTCTGCAGTTGCAGGCGCCTCTGGGTCCGCTTCTaGTTTTCTTTCACGCTGCTGTCCAGGTTTGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SFCSCRRLWVRF*FSFTLLSRFAN Trigger: ATTTGCAAACCTGGACAGCAGCGTGAAAGAAAACCAGAAGCGGACCCAGAGGCGCCTGCAACTGCAGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS CCA 72 bp | GTGGAGGTAATGGATGTCACGGAGACGGAGCGCTTGTaGATTTTAGGATTGTTGTTGCACGTTGGAGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VEVMDVTETERL*ILGLLLHVGGE Trigger: CTCCCCTCCAACGTGCAACAACAATCCTAAAATCCACAAGCGCTCCGTCTCCGTGACATCCATTACCTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS TCA 72 bp | TCAGCTGTTCTGCCACGAGATCTTCTGAGAAGTTCGTaGATTCTGCTGACCCTCCGCTCTCCAGTTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SAVLPRDLLRSS*ILLTLRSPVPL Trigger: AAGAGGAACTGGAGAGCGGAGGGTCAGCAGAATTCACGAACTTCTCAGAAGATCTCGTGGCAGAACAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS TCA 72 bp | ACGGTGCTGACAACACACTTGGTGAGCGTATTAAACTaGGAGATGGTGGCACGGATCGTAGGAGCCAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: TVLTTHLVSVLN*EMVARIVGAKC Trigger: GCATTTGGCTCCTACGATCCGTGCCACCATCTCTCAGTTTAATACGCTCACCAAGTGTGTTGTCAGCACCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS GCA 72 bp | GGCGCCTCTGGGTCCGCTTCTGGTTTTCTTTCACGCTaGTGTCCAGGTTTGCAAATTTTGAAGTTCCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GASGSASGFLSR*CPGLQILKFLP Trigger: AGGAAGGAACTTCAAAATTTGCAAACCTGGACAGCAGCGTGAAAGAAAACCAGAAGCGGACCCAGAGGCGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS GCA 72 bp | GGCAAAGTCAGGCTGGTCCGACTGCGCAACTTCACCTaGTCCTCCACCGAGTTCTTTTTGCGTAAAATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GKVRLVRLRNFT*SSTEFFLRKMK Trigger: TTTCATTTTACGCAAAAAGAACTCGGTGGAGGAGCAGGTGAAGTTGCGCAGTCGGACCAGCCTGACTTTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS CAA 72 bp | ACTGTGGAGGTAATGGATGTCACGGAGACGGAGCGCTaGTGGATTTTAGGATTGTTGTTGCACGTTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TVEVMDVTETER*WILGLLLHVGG Trigger: CCCTCCAACGTGCAACAACAATCCTAAAATCCACAAGCGCTCCGTCTCCGTGACATCCATTACCTCCACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS CAA 90 bp | GGAGCTGGTGTTGAGAAGTCCATTGTCGGAATCCACGTCCTGCTTTaGAAACTGTTCAAGAAGGTTCTGTGCTCTCCTCTCTGGGTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GAGVEKSIVGIHVLL*KLFKKVLCSPLWVR Trigger: TCTGACCCAGAGAGGAGAGCACAGAACCTTCTTGAACAGTTTCAAAAGCAGGACGTGGATTCCGACAATGGACTTCTCAACACCAGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
||
| CDS CAA 90 bp | GCCTCTGGGTCCGCTTCTGGTTTTCTTTCACGCTGCTGTCCAGGTTaGCAAATTTTGAAGTTCCTTCCTTCATTAGTAGCTCCCGACTGG | + |
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Preference number: 6 (lower is better) Translates to: ASGSASGFLSRCCPG*QILKFLPSLVAPDW Trigger: CCAGTCGGGAGCTACTAATGAAGGAAGGAACTTCAAAATTTGCAAACCTGGACAGCAGCGTGAAAGAAAACCAGAAGCGGACCCAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS TCA 72 bp | AAATACAGCCCAGGCAATGGTGAGGCACTACCTTCTTaGATAGTTGTGCGTCCATGTAGGTCAGCTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: KYSPGNGEALPS*IVVRPCRSAVL Trigger: CAGAACAGCTGACCTACATGGACGCACAACTATTCAAGAAGGTAGTGCCTCACCATTGCCTGGGCTGTATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS CCA 72 bp | TTGAAACTGTTCAAGAAGGTTCTGTGCTCTCCTCTCTaGGTCAGAGCCAGGCATCATCTGTTTGAGGTACTC | + |
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Preference number: 6 (lower is better) Translates to: LKLFKKVLCSPL*VRARHHLFEVL Trigger: GAGTACCTCAAACAGATGATGCCTGGCTCTGACCCAGAGAGGAGAGCACAGAACCTTCTTGAACAGTTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS TCA 72 bp | CTCTCCTCTGTCTTCAAAACTTCCCATATTCGAGCATaGTCATCCACCAGCCAGTGTCCTGTGTTTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LSSVFKTSHIRA*SSTSQCPVFSP Trigger: AGGAGAAAACACAGGACACTGGCTGGTGGATGATCATGCTCGAATATGGGAAGTTTTGAAGACAGAGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111859.8 |
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| CDS CAA 72 bp | GTTGAGAAGTCCATTGTCGGAATCCACGTCCTGCTTTaGAAACTGTTCAAGAAGGTTCTGTGCTCTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: VEKSIVGIHVLL*KLFKKVLCSPL Trigger: GAGAGGAGAGCACAGAACCTTCTTGAACAGTTTCAAAAGCAGGACGTGGATTCCGACAATGGACTTCTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS CAA 72 bp | CAAAGTTCACTTGGCTATTCATGGCGTAAAAGACGTTaGCAGAGTCCGGGATCACTAGTTCTTTGTCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: QSSLGYSWRKRR*QSPGSLVLCPP Trigger: CGGAGGACAAAGAACTAGTGATCCCGGACTCTGCAAACGTCTTTTACGCCATGAATAGCCAAGTGAACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS GCA 72 bp | AGCCTTTTTCAACCGATAGATGGAATTAGACTGCAGTaGGGAAACGATGGCCCTCAAGGAGGAAAAATTCTT | + |
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Preference number: 6 (lower is better) Translates to: SLFQPIDGIRLQ*GNDGPQGGKIL Trigger: AAGAATTTTTCCTCCTTGAGGGCCATCGTTTCCGCACTGCAGTCTAATTCCATCTATCGGTTGAAAAAGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS CAA 72 bp | TCCGCTTCTGGTTTTCTTTCACGCTGCTGTCCAGGTTaGCAAATTTTGAAGTTCCTTCCTTCATTAGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: SASGFLSRCCPG*QILKFLPSLVA Trigger: AGCTACTAATGAAGGAAGGAACTTCAAAATTTGCAAACCTGGACAGCAGCGTGAAAGAAAACCAGAAGCGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS TCA 72 bp | TCACCTGCTCCTCCACCGAGTTCTTTTTGCGTAAAATaGAATCAAAGTTCACTTGGCTATTCATGGCGTAAA | + |
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Preference number: 6 (lower is better) Translates to: SPAPPPSSFCVK*NQSSLGYSWRK Trigger: TTTACGCCATGAATAGCCAAGTGAACTTTGATTTCATTTTACGCAAAAAGAACTCGGTGGAGGAGCAGGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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| CDS CCA 72 bp | ATTTTGAAGTTCCTTCCTTCATTAGTAGCTCCCGACTaGTTAGATGGTTATTGTGATCAGAGAAGATATCTG | + |
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Preference number: 6 (lower is better) Translates to: ILKFLPSLVAPD*LDGYCDQRRYL Trigger: CAGATATCTTCTCTGATCACAATAACCATCTAACCAGTCGGGAGCTACTAATGAAGGAAGGAACTTCAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027760.14 ENSMUST00000111857.3 ENSMUST00000111859.8 |
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