Pregenerated sensors for RFXANK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036120Ensembl transcript IDs: ENSMUST00000075724.9, ENSMUST00000212320.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACGAGGCCCAGATGGCAGCTAGCTGGGGTCCAGAATCAGGAACCTaGAGCAGCCTGGGGGCGGAGCCAGGTGGTAGAGTCCCGTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: DEAQMAASWGPESGT*SSLGAEPGGRVPWF Trigger: AAACCACGGGACTCTACCACCTGGCTCCGCCCCCAGGCTGCTCCAGGTTCCTGATTCTGGACCCCAGCTAGCTGCCATCTGGGCCTCGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR CCA 90 bp | AACTGGGAGCTGAGTTGTGGAGACGAGGCCCAGATGGCAGCTAGCTaGGGTCCAGAATCAGGAACCTGGAGCAGCCTGGGGGCGGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: NWELSCGDEAQMAAS*GPESGTWSSLGAEP Trigger: TGGCTCCGCCCCCAGGCTGCTCCAGGTTCCTGATTCTGGACCCCAGCTAGCTGCCATCTGGGCCTCGTCTCCACAACTCAGCTCCCAGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR CCA 90 bp | AGATGGCAGCTAGCTGGGGTCCAGAATCAGGAACCTGGAGCAGCCTaGGGGCGGAGCCAGGTGGTAGAGTCCCGTGGTTTAAGTGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: RWQLAGVQNQEPGAA*GRSQVVESRGLSGV Trigger: CACACCACTTAAACCACGGGACTCTACCACCTGGCTCCGCCCCCAGGCTGCTCCAGGTTCCTGATTCTGGACCCCAGCTAGCTGCCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR GCA 90 bp | AGTGGGTGTCACTCGAGTTTCCCCAGTGTGTTCAGATCACACAGCTaGAGGTGCAGTTCCAGGGTGGCTTCTCCAGTCGCCACAGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: SGCHSSFPSVFRSHS*RCSSRVASPVATAA Trigger: GGCAGCTGTGGCGACTGGAGAAGCCACCCTGGAACTGCACCTGCAGCTGTGTGATCTGAACACACTGGGGAAACTCGAGTGACACCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR TCA 90 bp | GCAGGAGATGGATTTAGGGTCGGAGCAGGACGCAAGGGCTGGGGGTaGCTGATGCACCCAGTAGCACGGCCTCTTCAACATTTATTTTGG | + |
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Preference number: 1 (lower is better) Translates to: AGDGFRVGAGRKGWG*LMHPVARPLQHLFW Trigger: CCAAAATAAATGTTGAAGAGGCCGTGCTACTGGGTGCATCAGTCACCCCCAGCCCTTGCGTCCTGCTCCGACCCTAAATCCATCTCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR GCA 90 bp | CAGCAAGGATGTCCAAGTGTTGAGGCCCCTAACCTGGTCCTGTCCTaGAGGGTCAGTTCTGTGCTCAATCGCAACAGCCGGCAATTTGGA | + |
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Preference number: 1 (lower is better) Translates to: QQGCPSVEAPNLVLS*RVSSVLNRNSRQFG Trigger: TCCAAATTGCCGGCTGTTGCGATTGAGCACAGAACTGACCCTGCAGGACAGGACCAGGTTAGGGGCCTCAACACTTGGACATCCTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR CCA 90 bp | CTCCAGTCGCCACAGCTGCCTGGAAGGTACAAGAAAGCTGAGAGGTaGGGTGTCCACAGGGTTCCCTGGATTCTTAGCCCATTTCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: LQSPQLPGRYKKAER*GVHRVPWILSPFLH Trigger: ATGGAGAAATGGGCTAAGAATCCAGGGAACCCTGTGGACACCCCACCTCTCAGCTTTCTTGTACCTTCCAGGCAGCTGTGGCGACTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR CCA 90 bp | ATGCACCCAGTAGCACGGCCTCTTCAACATTTATTTTGGCCTCTTTaGAAGGCAATGGGGTGCAGGGCTCCCAAGCTGCATCCACGGCGA | + |
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Preference number: 1 (lower is better) Translates to: MHPVARPLQHLFWPL*KAMGCRAPKLHPRR Trigger: TCGCCGTGGATGCAGCTTGGGAGCCCTGCACCCCATTGCCTTCCAAAGAGGCCAAAATAAATGTTGAAGAGGCCGTGCTACTGGGTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR TCA 90 bp | TTCACGGGGTGGGGAGGCACTCAGCAAGATTGTAGATTTCTACCCTaGGGACACCAATGCCCTTCAGATATCCTGCCTGTCTTGTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: FTGWGGTQQDCRFLP*GHQCPSDILPVLWW Trigger: CCACCACAAGACAGGCAGGATATCTGAAGGGCATTGGTGTCCTCAGGGTAGAAATCTACAATCTTGCTGAGTGCCTCCCCACCCCGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR GCA 90 bp | ATCAAAGCTTTGACCTCCTCCGCAGGAGTAGGAACTGCTTCTCTGTaGTTTAGTGCCCTGGAGGGGCAGCAGGAAGATCAGGAGTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: IKALTSSAGVGTASL*FSALEGQQEDQEFK Trigger: CTTGAACTCCTGATCTTCCTGCTGCCCCTCCAGGGCACTAAAGCACAGAGAAGCAGTTCCTACTCCTGCGGAGGAGGTCAAAGCTTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR CCA 90 bp | CCAATGCCCTTCAGATATCCTGCCTGTCTTGTGGTGGGAGGGATCTaGTTTTCTACAAGCTTCAGGTCTTTGGGTGTGGTGGTAATGGCA | + |
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Preference number: 1 (lower is better) Translates to: PMPFRYPACLVVGGI*FSTSFRSLGVVVMA Trigger: TGCCATTACCACCACACCCAAAGACCTGAAGCTTGTAGAAAACCAGATCCCTCCCACCACAAGACAGGCAGGATATCTGAAGGGCATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR TCA 90 bp | GGCAGCAGGAAGATCAGGAGTTCAAGGTCAGCCTCAACTACAGTTTaGGGCCAGCCTGGGTTACCTGAGACCCCCATATTTAAAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: GSRKIRSSRSASTTV*GQPGLPETPIFKRK Trigger: TTTTCTTTTAAATATGGGGGTCTCAGGTAACCCAGGCTGGCCTCAAACTGTAGTTGAGGCTGACCTTGAACTCCTGATCTTCCTGCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR GCA 90 bp | ATTGTAGATTTCTACCCTGAGGACACCAATGCCCTTCAGATATCCTaGCTGTCTTGTGGTGGGAGGGATCTGGTTTTCTACAAGCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: IVDFYPEDTNALQIS*LSCGGRDLVFYKLQ Trigger: CTGAAGCTTGTAGAAAACCAGATCCCTCCCACCACAAGACAGGCAGGATATCTGAAGGGCATTGGTGTCCTCAGGGTAGAAATCTACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAGCAGCCTGGGGGCGGAGCCAGGTGGTAGAGTCCCGTGGTTTAAGTGGTGGCCGGCCTGGTGGGTaGCTCACAGCAAGGATGTCC | + |
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Preference number: 2 (lower is better) Translates to: PGAAWGRSQVVESRGLSGGRPGG*LTARMS Trigger: GGACATCCTTGCTGTGAGCCACCCACCAGGCCGGCC...ACCACTTAAACCACGGGACTCTACCACCTGGCTCCGCCCCCAGGCTGCTCCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGTCAGTGGCCCATCGGGTGGTCTCTGGACTGGGAAGGTGGGGCCTGATGGGCTGACTGTCCCTGAGTaGCTGGGTTCCCAGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LVSGPSGGLWTGKVGPDGLTVPE*LGSQQA Trigger: AGCCTGCTGGGAACCCAGGCACTCAGGGACAGTCAG...CCCATCAGGCCCCACCTTCCCAGTCCAGAGACCACCCGATGGGCCACTGACTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGGAGCAGCCTGGGGGCGGAGCCAGGTGGTAGAGTCCCGTGGTTTAAGTGGTCTCAGTTTATCCCTCTaGTTCCAGGGCCCCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PGAAWGRSQVVESRGLSGLSLSL*FQGPSQ Trigger: CTGGGAGGGGCCCTGGAAGCAGAGGGATAAACTGAG...ACCACTTAAACCACGGGACTCTACCACCTGGCTCCGCCCCCAGGCTGCTCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGTGGCTCACAGCAAGGATGTCCAAGTGTTGAGGCCCCTAACCTGGTCCTGTCCTGCGGGTGCTGGGTaGGAAGGCAGGGTGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: WVAHSKDVQVLRPLTWSCPAGAG*EGRVRS Trigger: GCTTCTCACCCTGCCTTCTCACCCAGCACCCGCAGG...ACAGGACCAGGTTAGGGGCCTCAACACTTGGACATCCTTGCTGTGAGCCACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGGAGCAGCCTGGGGGCGGAGCCAGGTGGTAGAGTCCCGTGGTTTAAGTGGTTGGGAAGGTGGGGCCTaGTGGGTCAGAGATAAAACC | + |
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Preference number: 2 (lower is better) Translates to: PGAAWGRSQVVESRGLSGWEGGA*WVRDKT Trigger: GGTTTTATCTCTGACCCATCAGGCCCCACCTTCCCA...ACCACTTAAACCACGGGACTCTACCACCTGGCTCCGCCCCCAGGCTGCTCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR TCA 90 bp | CCGGCCGGCCTGGTGGGTGGCTCACAGCAAGGATGTCCAAGTGTTGAGGCCCCTAAGGTACAAGAAAGCTaGGAGGTGGGGTGTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: PAGLVGGSQQGCPSVEAPKVQES*EVGCPQ Trigger: CTGTGGACACCCCACCTCTCAGCTTTCTTGTACCTT...AGGGGCCTCAACACTTGGACATCCTTGCTGTGAGCCACCCACCAGGCCGGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGTGGCTCACAGCAAGGATGTCCAAGTGTTGAGGCCCCTAACCTGGTCCTGTAAGCCAGTTGTGGGCTaGCTGTCCCTGAGTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: WVAHSKDVQVLRPLTWSCKPVVG*LSLSAW Trigger: CCAGGCACTCAGGGACAGTCAGCCCACAACTGGCTT...ACAGGACCAGGTTAGGGGCCTCAACACTTGGACATCCTTGCTGTGAGCCACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGTGGCTCACAGCAAGGATGTCCAAGTGTTGAGGCCCCTAACCTGGTCCTGTGGTGCAGTTCCAGGGTaGCTTCTCCAGTCGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: WVAHSKDVQVLRPLTWSCGAVPG*LLQSPQ Trigger: CTGTGGCGACTGGAGAAGCCACCCTGGAACTGCACC...ACAGGACCAGGTTAGGGGCCTCAACACTTGGACATCCTTGCTGTGAGCCACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR CCA 90 bp | GCACAGTGTGCTTGTACCCTTCCTGTGCTGGCCGTGGCAGTGACACTTGAAAGACAGGGCCCCTCCCAGTaGGTGTCACTCGAGTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: AQCACTLPVLAVAVTLERQGPSQ*VSLEFP Trigger: GGGAAACTCGAGTGACACCCACTGGGAGGGGCCCTG...TCTTTCAAGTGTCACTGCCACGGCCAGCACAGGAAGGGTACAAGCACACTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGGAGCAGCCTGGGGGCGGAGCCAGGTGGTAGAGTCCCGTGGTTTAAGTGGTTGTAGATTTCTACCCTaGGGACACCAATGCCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: PGAAWGRSQVVESRGLSGCRFLP*GHQCPS Trigger: TGAAGGGCATTGGTGTCCTCAGGGTAGAAATCTACA...ACCACTTAAACCACGGGACTCTACCACCTGGCTCCGCCCCCAGGCTGCTCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGTCAGTGGCCCATCGGGTGGTCTCTGGACTGGGAAGGTGGGGCCTGATGGGTTTATTGGTTCCTGTTaGGGAGGGCTCTTCCCACCA | + |
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Preference number: 2 (lower is better) Translates to: LVSGPSGGLWTGKVGPDGFIGSC*GGLFPP Trigger: TGGTGGGAAGAGCCCTCCGCAACAGGAACCAATAAA...CCCATCAGGCCCCACCTTCCCAGTCCAGAGACCACCCGATGGGCCACTGACTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR GCA 90 bp | GCACAGTGTGCTTGTACCCTTCCTGTGCTGGCCGTGGCAGTGACACTTGAAAGATCTACCACCTGCGGGTaGTGGGTGAGAAGGCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: AQCACTLPVLAVAVTLERSTTCG*WVRRQG Trigger: ACCCTGCCTTCTCACCCAGCACCCGCAGGTGGTAGA...TCTTTCAAGTGTCACTGCCACGGCCAGCACAGGAAGGGTACAAGCACACTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR CCA 90 bp | GATCAGGAGTTCAAGGTCAGCCTCAACTACAGTTTGAGGCCAGCCTGGGTTACCCCATCGGGTGGTCTCTaGACTGGGAAGGTGGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: DQEFKVSLNYSLRPAWVTPSGGL*TGKVGP Trigger: AGGCCCCACCTTCCCAGTCCAGAGACCACCCGATGG...GGTAACCCAGGCTGGCCTCAAACTGTAGTTGAGGCTGACCTTGAACTCCTGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR CAA 90 bp | CCCCTGGGAGGCACCCTGAAGACCTTCAAGTTCTGCACAGATTTATaGGTTCCTGTTGCGGAGGGCTCTTCCCACCACTGTCCAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: PLGGTLKTFKFCTDL*VPVAEGSSHHCPGA Trigger: AGCTCCTGGACAGTGGTGGGAAGAGCCCTCCGCAACAGGAACCAATAAATCTGTGCAGAACTTGAAGGTCTTCAGGGTGCCTCCCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR GCA 90 bp | CTTAGCCCATTTCTCCATTGCAGGTTCACGGGGTGGGGAGGCACTCAGCAAGATCAGGAGGATCCAGAATaGCAGGCCAGCTTGGACCAG | + |
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Preference number: 2 (lower is better) Translates to: LSPFLHCRFTGWGGTQQDQEDPE*QASLDQ Trigger: CTGGTCCAAGCTGGCCTGGCATTCTGGATCCTCCTG...ATCTTGCTGAGTGCCTCCCCACCCCGTGAACCTGCAATGGAGAAATGGGCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR TCA 90 bp | CGGGGTGGGGAGGCACTCAGCAAGATTGTAGATTTCTACCCTGAGGACACCAATCCCTGGGAGGCACCCTaGAGACCTTCAAGTTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: RGGEALSKIVDFYPEDTNPWEAP*RPSSSA Trigger: TGCAGAACTTGAAGGTCTTCAGGGTGCCTCCCAGGG...ATTGGTGTCCTCAGGGTAGAAATCTACAATCTTGCTGAGTGCCTCCCCACCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR GCA 90 bp | CTTAGCCCATTTCTCCATTGCAGGTTCACGGGGTGGGGAGGCACTCAGCAAGATGGAACTGCTTCTCTGTaGTTTAGTGCCCTGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LSPFLHCRFTGWGGTQQDGTASL*FSALEG Trigger: CCCCTCCAGGGCACTAAAGCACAGAGAAGCAGTTCC...ATCTTGCTGAGTGCCTCCCCACCCCGTGAACCTGCAATGGAGAAATGGGCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR TCA 90 bp | GATGCACCCAGTAGCACGGCCTCTTCAACATTTATTTTGGCCTCTTTGGAAGGCGGAAGAACTGGGAGCTaGGTTGTGGAGACGAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: DAPSSTASSTFILASLEGGRTGS*VVETRP Trigger: GGGCCTCGTCTCCACAACTCAGCTCCCAGTTCTTCC...GCCTTCCAAAGAGGCCAAAATAAATGTTGAAGAGGCCGTGCTACTGGGTGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR CCA 90 bp | GATGCACCCAGTAGCACGGCCTCTTCAACATTTATTTTGGCCTCTTTGGAAGGCCTGTCCCTGAGTGCCTaGGTTCCCAGCAGGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: DAPSSTASSTFILASLEGLSLSA*VPSRLS Trigger: AGACAGCCTGCTGGGAACCCAGGCACTCAGGGACAG...GCCTTCCAAAGAGGCCAAAATAAATGTTGAAGAGGCCGTGCTACTGGGTGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGATGAAGAGACGTGCTGGAACTCTGACCAGGTGAGGTGCTTCTATACCCCTAAGAAAGCTGAGAGGTaGGGTGTCCACAGGGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: QDEETCWNSDQVRCFYTPKKAER*GVHRVP Trigger: GGGAACCCTGTGGACACCCCACCTCTCAGCTTTCTT...AGGGGTATAGAAGCACCTCACCTGGTCAGAGTTCCAGCACGTCTCTTCATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR CCA 90 bp | CTTAGCCCATTTCTCCATTGCAGGTTCACGGGGTGGGGAGGCACTCAGCAAGATATCCTGCCTGTCTTGTaGTGGGAGGGATCTGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LSPFLHCRFTGWGGTQQDILPVL*WEGSGF Trigger: AAAACCAGATCCCTCCCACCACAAGACAGGCAGGAT...ATCTTGCTGAGTGCCTCCCCACCCCGTGAACCTGCAATGGAGAAATGGGCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR CCA 90 bp | GCACAGTGTGCTTGTACCCTTCCTGTGCTGGCCGTGGCAGTGACACTTGAAAGATCTGCACAGATTTATTaGTTCCTGTTGCGGAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: AQCACTLPVLAVAVTLERSAQIY*FLLRRA Trigger: AGCCCTCCGCAACAGGAACCAATAAATCTGTGCAGA...TCTTTCAAGTGTCACTGCCACGGCCAGCACAGGAAGGGTACAAGCACACTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR TCA 90 bp | CTTAGCCCATTTCTCCATTGCAGGTTCACGGGGTGGGGAGGCACTCAGCAAGATAAACCACCATTTCCTTaGCTGCAAGAAGTCACACCT | + |
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Preference number: 2 (lower is better) Translates to: LSPFLHCRFTGWGGTQQDKPPFP*LQEVTP Trigger: AGGTGTGACTTCTTGCAGTCAAGGAAATGGTGGTTT...ATCTTGCTGAGTGCCTCCCCACCCCGTGAACCTGCAATGGAGAAATGGGCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR TCA 90 bp | GATGCACCCAGTAGCACGGCCTCTTCAACATTTATTTTGGCCTCTTTGGAAGGCTTTGTCCGGACACTGTaGGCAGGTGAGACTCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: DAPSSTASSTFILASLEGFVRTL*AGETQC Trigger: ACACTGAGTCTCACCTGCTCACAGTGTCCGGACAAA...GCCTTCCAAAGAGGCCAAAATAAATGTTGAAGAGGCCGTGCTACTGGGTGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCCATGGGAACATTTTGTAGCCACTAGGTGTGTAGTTCAACAGAACCAGAAATGGCACTGGGGAGGCTaGGGCAGGAGGATCCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: RPWEHFVATRCVVQQNQKWHWGG*GRRIQN Trigger: ATTCTGGATCCTCCTGCCCCAGCCTCCCCAGTGCCA...TTTCTGGTTCTGTTGAACTACACACCTAGTGGCTACAAAATGTTCCCATGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR CAA 90 bp | TGTCCTGCAGGGTCAGTTCTGTGCTCAATCGCAACAGCCGGCAATTaGGAAAGAAACATCTTTTTGACCAGGATGAAGAGACGTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: CPAGSVLCSIATAGN*ERNIFLTRMKRRAG Trigger: TCCAGCACGTCTCTTCATCCTGGTCAAAAAGATGTTTCTTTCCAAATTGCCGGCTGTTGCGATTGAGCACAGAACTGACCCTGCAGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR CCA 90 bp | AATCTACACGAGACCCTGTCTCAAAAATATATTAGGCAGATCTGCTACTGTCCATGCAGGTTCACGGGGTaGGGAGGCACTCAGCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: NLHETLSQKYIRQICYCPCRFTG*GGTQQD Trigger: ATCTTGCTGAGTGCCTCCCCACCCCGTGAACCTGCA...TGGACAGTAGCAGATCTGCCTAATATATTTTTGAGACAGGGTCTCGTGTAGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGATGAAGAGACGTGCTGGAACTCTGACCAGGTGAGGTGCTTCTATACCCCTAAGACCTTCAAGTTCTaGACAGATTTATTGGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: QDEETCWNSDQVRCFYTPKTFKF*TDLLVP Trigger: AGGAACCAATAAATCTGTGCAGAACTTGAAGGTCTT...AGGGGTATAGAAGCACCTCACCTGGTCAGAGTTCCAGCACGTCTCTTCATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR CCA 72 bp | TGGCCGGGGGTAGGGAGTGTGGCCGCTAGATCAAGTTaGGAGTGGCAGCGCCGGGCTTCGAACTCGCGTTCC | + |
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Preference number: 3 (lower is better) Translates to: WPGVGSVAARSS*EWQRRASNSRS Trigger: GGAACGCGAGTTCGAAGCCCGGCGCTGCCACTCCCAACTTGATCTAGCGGCCACACTCCCTACCCCCGGCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR-3UTR CAA 90 bp | CCTGGAGCAGCCTGGGGGCGGAGCCAGGTGGTAGAGTCCCGTGGTTTAAGTGGTGAATGCCAGGCCAGCTaGGACCAGACCCTGTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: PGAAWGRSQVVESRGLSGECQAS*DQTLSQ Trigger: TTGAGACAGGGTCTGGTCCAAGCTGGCCTGGCATTC...ACCACTTAAACCACGGGACTCTACCACCTGGCTCCGCCCCCAGGCTGCTCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR CCA 72 bp | GGGGCGGAGCCAGGTGGTAGAGTCCCGTGGTTTAAGTaGTGTGTTGCCTGGTGCATCTGTTCCCTGGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: GAEPGGRVPWFK*CVAWCICSLAG Trigger: CCCAGCCAGGGAACAGATGCACCAGGCAACACACCACTTAAACCACGGGACTCTACCACCTGGCTCCGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR CCA 72 bp | CTGAGTTGTGGAGACGAGGCCCAGATGGCAGCTAGCTaGGGTCCAGAATCAGGAACCTGGAGCAGCCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: LSCGDEAQMAAS*GPESGTWSSLG Trigger: CCCCAGGCTGCTCCAGGTTCCTGATTCTGGACCCCAGCTAGCTGCCATCTGGGCCTCGTCTCCACAACTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
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| 3UTR TCA 72 bp | ACTGTCCAGGAGCTGCCTTTCAAGCCAGTTGTGGGCTaGCTGTCCCTGAGTGCCTGGGTTCCCAGCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: TVQELPFKPVVG*LSLSAWVPSRL Trigger: CAGCCTGCTGGGAACCCAGGCACTCAGGGACAGTCAGCCCACAACTGGCTTGAAAGGCAGCTCCTGGACAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
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| 3UTR GCA 72 bp | CTCTTTGGAAGGCAATGGGGTGCAGGGCTCCCAAGCTaGATCCACGGCGAGCAAGGCCTTCTGCAGGTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LFGRQWGAGLPS*IHGEQGLLQVD Trigger: GTCTACCTGCAGAAGGCCTTGCTCGCCGTGGATGCAGCTTGGGAGCCCTGCACCCCATTGCCTTCCAAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CCA 72 bp | AGCAGCCTGGGGGCGGAGCCAGGTGGTAGAGTCCCGTaGTTTAAGTGGTGTGTTGCCTGGTGCATCTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSLGAEPGGRVP*FKWCVAWCICS Trigger: GGAACAGATGCACCAGGCAACACACCACTTAAACCACGGGACTCTACCACCTGGCTCCGCCCCCAGGCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR TCA 72 bp | TGGCCGTGTAGTCATCTACCACCTGCGGGTGCTGGGTaGGAAGGCAGGGTGAGAAGCGGCTATTCTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: WPCSHLPPAGAG*EGRVRSGYSSR Trigger: CCTGGAAGAATAGCCGCTTCTCACCCTGCCTTCTCACCCAGCACCCGCAGGTGGTAGATGACTACACGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR TCA 72 bp | GGATTTAGGGTCGGAGCAGGACGCAAGGGCTGGGGGTaGCTGATGCACCCAGTAGCACGGCCTCTTCAACAT | + |
|
Preference number: 3 (lower is better) Translates to: GFRVGAGRKGWG*LMHPVARPLQH Trigger: ATGTTGAAGAGGCCGTGCTACTGGGTGCATCAGTCACCCCCAGCCCTTGCGTCCTGCTCCGACCCTAAATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR TCA 72 bp | CCAGTCGCCACAGCTGCCTGGAAGGTACAAGAAAGCTaGGAGGTGGGGTGTCCACAGGGTTCCCTGGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: PVATAAWKVQES*EVGCPQGSLDS Trigger: AGAATCCAGGGAACCCTGTGGACACCCCACCTCTCAGCTTTCTTGTACCTTCCAGGCAGCTGTGGCGACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR GCA 72 bp | CACTCGAGTTTCCCCAGTGTGTTCAGATCACACAGCTaGAGGTGCAGTTCCAGGGTGGCTTCTCCAGTCGCC | + |
|
Preference number: 3 (lower is better) Translates to: HSSFPSVFRSHS*RCSSRVASPVA Trigger: GGCGACTGGAGAAGCCACCCTGGAACTGCACCTGCAGCTGTGTGATCTGAACACACTGGGGAAACTCGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CCA 72 bp | CAAGAGCCTTTAGTCAGTGGCCCATCGGGTGGTCTCTaGACTGGGAAGGTGGGGCCTGATGGGTCAGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: QEPLVSGPSGGL*TGKVGPDGSEI Trigger: TATCTCTGACCCATCAGGCCCCACCTTCCCAGTCCAGAGACCACCCGATGGGCCACTGACTAAAGGCTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CCA 72 bp | TGTTCAGATCACACAGCTGCAGGTGCAGTTCCAGGGTaGCTTCTCCAGTCGCCACAGCTGCCTGGAAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: CSDHTAAGAVPG*LLQSPQLPGRY Trigger: GTACCTTCCAGGCAGCTGTGGCGACTGGAGAAGCCACCCTGGAACTGCACCTGCAGCTGTGTGATCTGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR GCA 72 bp | AACCTTGCAGTTACCAAGTGCCTCAGTTTATCCCTCTaGTTCCAGGGCCCCTCCCAGTGGGTGTCACTCGAG | + |
|
Preference number: 3 (lower is better) Translates to: NLAVTKCLSLSL*FQGPSQWVSLE Trigger: CTCGAGTGACACCCACTGGGAGGGGCCCTGGAAGCAGAGGGATAAACTGAGGCACTTGGTAACTGCAAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR GCA 72 bp | GCCTTGAGATCTCTGGGGAGACTAGAAAGCACAGTGTaGTTGTACCCTTCCTGTGCTGGCCGTGGCAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: ALRSLGRLESTV*LYPSCAGRGSD Trigger: GTCACTGCCACGGCCAGCACAGGAAGGGTACAAGCACACTGTGCTTTCTAGTCTCCCCAGAGATCTCAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CCA 72 bp | CCACAGCTGCCTGGAAGGTACAAGAAAGCTGAGAGGTaGGGTGTCCACAGGGTTCCCTGGATTCTTAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PQLPGRYKKAER*GVHRVPWILSP Trigger: TGGGCTAAGAATCCAGGGAACCCTGTGGACACCCCACCTCTCAGCTTTCTTGTACCTTCCAGGCAGCTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR GCA 72 bp | CAACATTTATTTTGGCCTCTTTGGAAGGCAATGGGGTaGAGGGCTCCCAAGCTGCATCCACGGCGAGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QHLFWPLWKAMG*RAPKLHPRRAR Trigger: CCTTGCTCGCCGTGGATGCAGCTTGGGAGCCCTGCACCCCATTGCCTTCCAAAGAGGCCAAAATAAATGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CCA 72 bp | GGCTGGGGCAGGAGGATCCAGAATGCCAGGCCAGCTTaGACCAGACCCTGTCTCAAAAGAATCAAAGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GWGRRIQNARPA*TRPCLKRIKAL Trigger: CAAAGCTTTGATTCTTTTGAGACAGGGTCTGGTCCAAGCTGGCCTGGCATTCTGGATCCTCCTGCCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CCA 72 bp | CACAGCAAGGATGTCCAAGTGTTGAGGCCCCTAACCTaGTCCTGTCCTGCAGGGTCAGTTCTGTGCTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: HSKDVQVLRPLT*SCPAGSVLCSI Trigger: GATTGAGCACAGAACTGACCCTGCAGGACAGGACCAGGTTAGGGGCCTCAACACTTGGACATCCTTGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR GCA 72 bp | GACCTTCAAGTTCTGCACAGATTTATTGGTTCCTGTTaGGGAGGGCTCTTCCCACCACTGTCCAGGAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: DLQVLHRFIGSC*GGLFPPLSRSC Trigger: GCAGCTCCTGGACAGTGGTGGGAAGAGCCCTCCGCAACAGGAACCAATAAATCTGTGCAGAACTTGAAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR GCA 72 bp | CCCCTAACCTGGTCCTGTCCTGCAGGGTCAGTTCTGTaGTCAATCGCAACAGCCGGCAATTTGGAAAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PLTWSCPAGSVL*SIATAGNLERN Trigger: GTTTCTTTCCAAATTGCCGGCTGTTGCGATTGAGCACAGAACTGACCCTGCAGGACAGGACCAGGTTAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CCA 72 bp | CTCTTCAACATTTATTTTGGCCTCTTTGGAAGGCAATaGGGTGCAGGGCTCCCAAGCTGCATCCACGGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: LFNIYFGLFGRQ*GAGLPSCIHGE Trigger: CTCGCCGTGGATGCAGCTTGGGAGCCCTGCACCCCATTGCCTTCCAAAGAGGCCAAAATAAATGTTGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CCA 72 bp | AAGAAAGCTGAGAGGTGGGGTGTCCACAGGGTTCCCTaGATTCTTAGCCCATTTCTCCATTGCAGGTTCACG | + |
|
Preference number: 3 (lower is better) Translates to: KKAERWGVHRVP*ILSPFLHCRFT Trigger: CGTGAACCTGCAATGGAGAAATGGGCTAAGAATCCAGGGAACCCTGTGGACACCCCACCTCTCAGCTTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CCA 72 bp | GTAGCACGGCCTCTTCAACATTTATTTTGGCCTCTTTaGAAGGCAATGGGGTGCAGGGCTCCCAAGCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VARPLQHLFWPL*KAMGCRAPKLH Trigger: ATGCAGCTTGGGAGCCCTGCACCCCATTGCCTTCCAAAGAGGCCAAAATAAATGTTGAAGAGGCCGTGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGCCCATTTCTCCATTGCAGGTTCACGGGGTGGGGAGGCACTCAGCAAGATAAAACCACCATTTCCTaGACTGCAAGAAGTCACACC | + |
|
Preference number: 3 (lower is better) Translates to: LSPFLHCRFTGWGGTQQDKTTIS*TARSHT Trigger: GGTGTGACTTCTTGCAGTCAAGGAAATGGTGGTTTT...ATCTTGCTGAGTGCCTCCCCACCCCGTGAACCTGCAATGGAGAAATGGGCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR TCA 72 bp | TGGGGAGGCACTCAGCAAGATTGTAGATTTCTACCCTaGGGACACCAATGCCCTTCAGATATCCTGCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: WGGTQQDCRFLP*GHQCPSDILPV Trigger: GACAGGCAGGATATCTGAAGGGCATTGGTGTCCTCAGGGTAGAAATCTACAATCTTGCTGAGTGCCTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR TCA 72 bp | ACCAGGATGAAGAGACGTGCTGGAACTCTGACCAGGTaGGGTGCTTCTATACCCCTTCATTCCAAGTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: TRMKRRAGTLTR*GASIPLHSKCR Trigger: CCTACACTTGGAATGAAGGGGTATAGAAGCACCTCACCTGGTCAGAGTTCCAGCACGTCTCTTCATCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CCA 72 bp | GGACACCAATGCCCTTCAGATATCCTGCCTGTCTTGTaGTGGGAGGGATCTGGTTTTCTACAAGCTTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GHQCPSDILPVL*WEGSGFLQASG Trigger: ACCTGAAGCTTGTAGAAAACCAGATCCCTCCCACCACAAGACAGGCAGGATATCTGAAGGGCATTGGTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR TCA 72 bp | GGGCCTGATGGGTCAGAGATAAAACCACCATTTCCTTaGCTGCAAGAAGTCACACCTTCTCCATCCCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: GPDGSEIKPPFP*LQEVTPSPSPQ Trigger: TTGTGGGGATGGAGAAGGTGTGACTTCTTGCAGTCAAGGAAATGGTGGTTTTATCTCTGACCCATCAGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CCA 72 bp | TTCAGATATCCTGCCTGTCTTGTGGTGGGAGGGATCTaGTTTTCTACAAGCTTCAGGTCTTTGGGTGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FRYPACLVVGGI*FSTSFRSLGVV Trigger: CACCACACCCAAAGACCTGAAGCTTGTAGAAAACCAGATCCCTCCCACCACAAGACAGGCAGGATATCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CCA 72 bp | CACCAATGCCCTTCAGATATCCTGCCTGTCTTGTGGTaGGAGGGATCTGGTTTTCTACAAGCTTCAGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HQCPSDILPVLW*EGSGFLQASGL Trigger: AAGACCTGAAGCTTGTAGAAAACCAGATCCCTCCCACCACAAGACAGGCAGGATATCTGAAGGGCATTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CCA 72 bp | ATTCTTAGCCCATTTCTCCATTGCAGGTTCACGGGGTaGGGAGGCACTCAGCAAGATTGTAGATTTCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: ILSPFLHCRFTG*GGTQQDCRFLP Trigger: GGGTAGAAATCTACAATCTTGCTGAGTGCCTCCCCACCCCGTGAACCTGCAATGGAGAAATGGGCTAAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR-3UTR CAA 90 bp | AATCTACACGAGACCCTGTCTCAAAAATATATTAGGCAGATCTGCTACTGTCCAGAAAGCACAGTGTGCTaGTACCCTTCCTGTGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: NLHETLSQKYIRQICYCPESTVC*YPSCAG Trigger: GCCAGCACAGGAAGGGTACAAGCACACTGTGCTTTC...TGGACAGTAGCAGATCTGCCTAATATATTTTTGAGACAGGGTCTCGTGTAGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR GCA 72 bp | GGAAAGAAACATCTTTTTGACCAGGATGAAGAGACGTaGTGGAACTCTGACCAGGTGAGGTGCTTCTATACC | + |
|
Preference number: 3 (lower is better) Translates to: GKKHLFDQDEET*WNSDQVRCFYT Trigger: GGTATAGAAGCACCTCACCTGGTCAGAGTTCCAGCACGTCTCTTCATCCTGGTCAAAAAGATGTTTCTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CCA 72 bp | AAGAAACATCTTTTTGACCAGGATGAAGAGACGTGCTaGAACTCTGACCAGGTGAGGTGCTTCTATACCCCT | + |
|
Preference number: 3 (lower is better) Translates to: KKHLFDQDEETC*NSDQVRCFYTP Trigger: AGGGGTATAGAAGCACCTCACCTGGTCAGAGTTCCAGCACGTCTCTTCATCCTGGTCAAAAAGATGTTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR TCA 90 bp | GTGGCCCATCGGGTGGTCTCTGGACTGGGAAGGTGGGGCCTGATGGGTCAGAGAAGTCAGCCTCTGTGGTaGGGTCAGCACCCCGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VAHRVVSGLGRWGLMGQRSQPLW*GQHPGP Trigger: TGGCCCGGGGTGCTGACCTCACCACAGAGGCTGACT...TCTCTGACCCATCAGGCCCCACCTTCCCAGTCCAGAGACCACCCGATGGGCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCAGCCTGGGGGCGGAGCCAGGTGGTAGAGTCCCGTGGTTTAAGTGGTAGGATTCACAGCGTCTaGGGTGCAGGGGAACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGAAWGRSQVVESRGLSGRIHSV*GAGEQA Trigger: AGCCTGTTCCCCTGCACCCCAGACGCTGTGAATCCT...ACCACTTAAACCACGGGACTCTACCACCTGGCTCCGCCCCCAGGCTGCTCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR CCA 90 bp | CCGGCCGGCCTGGTGGGTGGCTCACAGCAAGGATGTCCAAGTGTTGAGGCCCCTTGGGCTGCAAGCTGGTaGATAGAAAGGGAGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAGLVGGSQQGCPSVEAPWAASW*IERESR Trigger: CCTGGACTCCCTTTCTATCCACCAGCTTGCAGCCCA...AGGGGCCTCAACACTTGGACATCCTTGCTGTGAGCCACCCACCAGGCCGGCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGCAGGAGGATCCAGAATGCCAGGCCAGCTTGGACCAGACCCTGTCTCATCCTTGGCCAGGATGTaGGGGTCAGCACCCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGAGGSRMPGQLGPDPVSSLARM*GSAPQS Trigger: AGACTGGGGTGCTGACCCCCACATCCTGGCCAAGGA...TGAGACAGGGTCTGGTCCAAGCTGGCCTGGCATTCTGGATCCTCCTGCCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR GCA 90 bp | TTAGTCAGTGGCCCATCGGGTGGTCTCTGGACTGGGAAGGTGGGGCCTGATGGGGTATCCCAGGGCCACTaGGAGATCCATTGGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LVSGPSGGLWTGKVGPDGVSQGH*EIHWGV Trigger: TACACCCCAATGGATCTCGCAGTGGCCCTGGGATAC...CCCATCAGGCCCCACCTTCCCAGTCCAGAGACCACCCGATGGGCCACTGACTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR GCA 90 bp | CCGGCCGGCCTGGTGGGTGGCTCACAGCAAGGATGTCCAAGTGTTGAGGCCCCTTTCAAGAAACTTCCCTaGAGTGAGGATGCACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PAGLVGGSQQGCPSVEAPFKKLP*SEDALA Trigger: TGCCAGTGCATCCTCACTGCAGGGAAGTTTCTTGAA...AGGGGCCTCAACACTTGGACATCCTTGCTGTGAGCCACCCACCAGGCCGGCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR CCA 90 bp | GATCAGGAGTTCAAGGTCAGCCTCAACTACAGTTTGAGGCCAGCCTGGGTTACCCGCTCTCCCGCTCCTTaGCCAGGATGTGGGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DQEFKVSLNYSLRPAWVTRSPAP*PGCGGQ Trigger: CTGACCCCCACATCCTGGCCAAGGAGCGGGAGAGCG...GGTAACCCAGGCTGGCCTCAAACTGTAGTTGAGGCTGACCTTGAACTCCTGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGCTCACAGCAAGGATGTCCAAGTGTTGAGGCCCCTAACCTGGTCCTGTTGGCTCAGCTCCCCTTaGGCTGCAAGCTGGTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: WVAHSKDVQVLRPLTWSCWLSSP*AASWWI Trigger: TATCCACCAGCTTGCAGCCCAAGGGGAGCTGAGCCA...ACAGGACCAGGTTAGGGGCCTCAACACTTGGACATCCTTGCTGTGAGCCACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR TCA 90 bp | CTTAGCCCATTTCTCCATTGCAGGTTCACGGGGTGGGGAGGCACTCAGCAAGATTGCAGGGGAACAGGCTaGGGACGACAGTGTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSPFLHCRFTGWGGTQQDCRGTG*GRQCLS Trigger: ACTCAGACACTGTCGTCCTCAGCCTGTTCCCCTGCA...ATCTTGCTGAGTGCCTCCCCACCCCGTGAACCTGCAATGGAGAAATGGGCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGCTCACAGCAAGGATGTCCAAGTGTTGAGGCCCCTAACCTGGTCCTGTCACAGCGTAGAGCAGTaGTGTTCCTCCATTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WVAHSKDVQVLRPLTWSCHSVEQ*CSSIPV Trigger: GACTGGAATGGAGGAACACCACTGCTCTACGCTGTG...ACAGGACCAGGTTAGGGGCCTCAACACTTGGACATCCTTGCTGTGAGCCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR TCA 90 bp | CAGGATGAAGAGACGTGCTGGAACTCTGACCAGGTGAGGTGCTTCTATACCCCTGAGGACGACAGTGTCTaGGTTCTCTGGGGACTCATC | + |
|
Preference number: 4 (lower is better) Translates to: QDEETCWNSDQVRCFYTPEDDSV*VLWGLI Trigger: GATGAGTCCCCAGAGAACTCAGACACTGTCGTCCTC...AGGGGTATAGAAGCACCTCACCTGGTCAGAGTTCCAGCACGTCTCTTCATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR TCA 90 bp | GACACCAATGCCCTTCAGATATCCTGCCTGTCTTGTGGTGGGAGGGATCTGGTTGAAACTTCCCTGCAGTaGGGATGCACTGGCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DTNALQISCLSCGGRDLVETSLQ*GCTGIC Trigger: GCAGATGCCAGTGCATCCTCACTGCAGGGAAGTTTC...AACCAGATCCCTCCCACCACAAGACAGGCAGGATATCTGAAGGGCATTGGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR TCA 90 bp | GACACCAATGCCCTTCAGATATCCTGCCTGTCTTGTGGTGGGAGGGATCTGGTTCACGTTGCCGGTTTGTaGGGGTTGTGGAGTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DTNALQISCLSCGGRDLVHVAGL*GLWSAS Trigger: TGAAGCACTCCACAACCCTCACAAACCGGCAACGTG...AACCAGATCCCTCCCACCACAAGACAGGCAGGATATCTGAAGGGCATTGGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGTCAGCCTCAACTACAGTTTGAGGCCAGCCTGGGTTACCTGAGACCCCCAGGAACAGGAGGTTGCTaGTTTGGGACAAGGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGQPQLQFEASLGYLRPPGTGGC*FGTRFS Trigger: AGAGAACCTTGTCCCAAACCAGCAACCTCCTGTTCC...TGGGGGTCTCAGGTAACCCAGGCTGGCCTCAAACTGTAGTTGAGGCTGACCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR CCA 90 bp | GACACCAATGCCCTTCAGATATCCTGCCTGTCTTGTGGTGGGAGGGATCTGGTTCACTGCGAGATCCATTaGGGTGTAGCCAGAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DTNALQISCLSCGGRDLVHCEIH*GVARVS Trigger: GCTGACTCTGGCTACACCCCAATGGATCTCGCAGTG...AACCAGATCCCTCCCACCACAAGACAGGCAGGATATCTGAAGGGCATTGGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CAA 72 bp | AGGCTGGGGCAGGAGGATCCAGAATGCCAGGCCAGCTaGGACCAGACCCTGTCTCAAAAGAATCAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLGQEDPECQAS*DQTLSQKNQSF Trigger: AAAGCTTTGATTCTTTTGAGACAGGGTCTGGTCCAAGCTGGCCTGGCATTCTGGATCCTCCTGCCCCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CAA 72 bp | TTGAGATCTCTGGGGAGACTAGAAAGCACAGTGTGCTaGTACCCTTCCTGTGCTGGCCGTGGCAGTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: LRSLGRLESTVC*YPSCAGRGSDT Trigger: AGTGTCACTGCCACGGCCAGCACAGGAAGGGTACAAGCACACTGTGCTTTCTAGTCTCCCCAGAGATCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CAA 72 bp | GATGCACCCAGTAGCACGGCCTCTTCAACATTTATTTaGGCCTCTTTGGAAGGCAATGGGGTGCAGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DAPSSTASSTFI*ASLEGNGVQGS Trigger: GGAGCCCTGCACCCCATTGCCTTCCAAAGAGGCCAAAATAAATGTTGAAGAGGCCGTGCTACTGGGTGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR TCA 90 bp | CAAGGTCAGCCTCAACTACAGTTTGAGGCCAGCCTGGGTTACCTGAGACCCCCATCCAGTCATAGATGTTaGTGTCCACGTCACGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGQPQLQFEASLGYLRPPSSHRC*CPRHGQ Trigger: TTGACCGTGACGTGGACATCAACATCTATGACTGGA...TGGGGGTCTCAGGTAACCCAGGCTGGCCTCAAACTGTAGTTGAGGCTGACCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR CCA 90 bp | GCACAGTGTGCTTGTACCCTTCCTGTGCTGGCCGTGGCAGTGACACTTGAAAGAGCAGTGAGGATGCACTaGCATCTGCTTCAGGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: AQCACTLPVLAVAVTLERAVRMH*HLLQDS Trigger: TGAATCCTGAAGCAGATGCCAGTGCATCCTCACTGC...TCTTTCAAGTGTCACTGCCACGGCCAGCACAGGAAGGGTACAAGCACACTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CAA 72 bp | AGACCTTCAAGTTCTGCACAGATTTATTGGTTCCTGTaGCGGAGGGCTCTTCCCACCACTGTCCAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPSSSAQIYWFL*RRALPTTVQEL Trigger: CAGCTCCTGGACAGTGGTGGGAAGAGCCCTCCGCAACAGGAACCAATAAATCTGTGCAGAACTTGAAGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CAA 72 bp | GGCACCCTGAAGACCTTCAAGTTCTGCACAGATTTATaGGTTCCTGTTGCGGAGGGCTCTTCCCACCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTLKTFKFCTDL*VPVAEGSSHHC Trigger: ACAGTGGTGGGAAGAGCCCTCCGCAACAGGAACCAATAAATCTGTGCAGAACTTGAAGGTCTTCAGGGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CAA 72 bp | AGTAGCACGGCCTCTTCAACATTTATTTTGGCCTCTTaGGAAGGCAATGGGGTGCAGGGCTCCCAAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTASSTFILAS*EGNGVQGSQAA Trigger: TGCAGCTTGGGAGCCCTGCACCCCATTGCCTTCCAAAGAGGCCAAAATAAATGTTGAAGAGGCCGTGCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR TCA 90 bp | GATCAGGAGTTCAAGGTCAGCCTCAACTACAGTTTGAGGCCAGCCTGGGTTACCTGCTCTGGAACAATCTaGGGATGTGGCTCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: DQEFKVSLNYSLRPAWVTCSGTI*GCGSPS Trigger: TGATGGAGAGCCACATCCTCAGATTGTTCCAGAGCA...GGTAACCCAGGCTGGCCTCAAACTGTAGTTGAGGCTGACCTTGAACTCCTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR GCA 90 bp | CGGGGTGGGGAGGCACTCAGCAAGATTGTAGATTTCTACCCTGAGGACACCAATTCAGGAACAGGAGGTTaGTGGTTTGGGACAAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGGEALSKIVDFYPEDTNSGTGG*WFGTRF Trigger: GAACCTTGTCCCAAACCAGCAACCTCCTGTTCCTGA...ATTGGTGTCCTCAGGGTAGAAATCTACAATCTTGCTGAGTGCCTCCCCACCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR GCA 90 bp | GACACCAATGCCCTTCAGATATCCTGCCTGTCTTGTGGTGGGAGGGATCTGGTTGTGAGGGTTGTGGAGTaGTTCAAGAAACTTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DTNALQISCLSCGGRDLVVRVVE*FKKLPC Trigger: GCAGGGAAGTTTCTTGAAGCACTCCACAACCCTCAC...AACCAGATCCCTCCCACCACAAGACAGGCAGGATATCTGAAGGGCATTGGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR GCA 90 bp | GATGCACCCAGTAGCACGGCCTCTTCAACATTTATTTTGGCCTCTTTGGAAGGCCAGCTCCCCTTGGGCTaGAAGCTGGTGGATAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DAPSSTASSTFILASLEGQLPLG*KLVDRK Trigger: CTTTCTATCCACCAGCTTGCAGCCCAAGGGGAGCTG...GCCTTCCAAAGAGGCCAAAATAAATGTTGAAGAGGCCGTGCTACTGGGTGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR GCA 90 bp | ACCAGACCCTGTCTCAAAAGAATCAAAGCTTTGACCTCCTCCGCAGGAGTAGGAGGATGCACTGGCATCTaGTTCAGGATTCACAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TRPCLKRIKALTSSAGVGGCTGI*FRIHSV Trigger: GACGCTGTGAATCCTGAAGCAGATGCCAGTGCATCC...TCCTACTCCTGCGGAGGAGGTCAAAGCTTTGATTCTTTTGAGACAGGGTCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CAA 72 bp | GCTTGGACCAGACCCTGTCTCAAAAGAATCAAAGCTTaGACCTCCTCCGCAGGAGTAGGAACTGCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AWTRPCLKRIKA*TSSAGVGTASL Trigger: CAGAGAAGCAGTTCCTACTCCTGCGGAGGAGGTCAAAGCTTTGATTCTTTTGAGACAGGGTCTGGTCCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| 3UTR CAA 72 bp | GGGTCAGTTCTGTGCTCAATCGCAACAGCCGGCAATTaGGAAAGAAACATCTTTTTGACCAGGATGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSVLCSIATAGN*ERNIFLTRMKR Trigger: TCTCTTCATCCTGGTCAAAAAGATGTTTCTTTCCAAATTGCCGGCTGTTGCGATTGAGCACAGAACTGACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR CCA 90 bp | AATCTACACGAGACCCTGTCTCAAAAATATATTAGGCAGATCTGCTACTGTCCAAACAATCTGAGGATGTaGCTCTCCATCACCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLHETLSQKYIRQICYCPNNLRM*LSITCC Trigger: GCAACAGGTGATGGAGAGCCACATCCTCAGATTGTT...TGGACAGTAGCAGATCTGCCTAATATATTTTTGAGACAGGGTCTCGTGTAGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR CAA 90 bp | GTGGCCCATCGGGTGGTCTCTGGACTGGGAAGGTGGGGCCTGATGGGTCAGAGAGCGCTCTCCCGCTCCTaGGCCAGGATGTGGGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VAHRVVSGLGRWGLMGQRALSRS*ARMWGS Trigger: TGACCCCCACATCCTGGCCAAGGAGCGGGAGAGCGC...TCTCTGACCCATCAGGCCCCACCTTCCCAGTCCAGAGACCACCCGATGGGCCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR CAA 90 bp | CCGGCCGGCCTGGTGGGTGGCTCACAGCAAGGATGTCCAAGTGTTGAGGCCCCTTTGGCTCAGCTCCCCTaGGGCTGCAAGCTGGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PAGLVGGSQQGCPSVEAPLAQLP*GCKLVD Trigger: ATCCACCAGCTTGCAGCCCAAGGGGAGCTGAGCCAA...AGGGGCCTCAACACTTGGACATCCTTGCTGTGAGCCACCCACCAGGCCGGCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS TCA 90 bp | CCACTGCGAGATCCATTGGGGTGTAGCCAGAGTCAGCCTCTGTGGTaGGGTCAGCACCCCGGGCCAGTAAGGCCTCCACACACTTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: PLRDPLGCSQSQPLW*GQHPGPVRPPHTSR Trigger: ACGTGAAGTGTGTGGAGGCCTTACTGGCCCGGGGTGCTGACCTCACCACAGAGGCTGACTCTGGCTACACCCCAATGGATCTCGCAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS CCA 90 bp | TGTAGCCACCCATACTGGCAAGTGACAGTGCGCTCTCCCGCTCCTTaGCCAGGATGTGGGGGTCAGCACCCCAGTCTAGCAGGAAGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: CSHPYWQVTVRSPAP*PGCGGQHPSLAGSE Trigger: TTCGCTTCCTGCTAGACTGGGGTGCTGACCCCCACATCCTGGCCAAGGAGCGGGAGAGCGCACTGTCACTTGCCAGTATGGGTGGCTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS CCA 90 bp | CACGGTCAAGCAGCAACCTCACGATGTCCGTGTAGCCACCCATACTaGCAAGTGACAGTGCGCTCTCCCGCTCCTTGGCCAGGATGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HGQAATSRCPCSHPY*QVTVRSPAPWPGCG Trigger: CCCACATCCTGGCCAAGGAGCGGGAGAGCGCACTGTCACTTGCCAGTATGGGTGGCTACACGGACATCGTGAGGTTGCTGCTTGACCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS CCA 90 bp | CACCTGTTGCACTTTGCGGTATCCCAGGGCCACTGCGAGATCCATTaGGGTGTAGCCAGAGTCAGCCTCTGTGGTGAGGTCAGCACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: HLLHFAVSQGHCEIH*GVARVSLCGEVSTP Trigger: CGGGGTGCTGACCTCACCACAGAGGCTGACTCTGGCTACACCCCAATGGATCTCGCAGTGGCCCTGGGATACCGCAAAGTGCAACAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS TCA 90 bp | TTTCCAGACAGGCATGTGCAGGCAGGACACGCACCCTTCCGCAGATaGTCCTTCAGTTGGCTCAGCTCCCCTTGGGCTGCAAGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FPDRHVQAGHAPFRR*SFSWLSSPWAASWW Trigger: CCACCAGCTTGCAGCCCAAGGGGAGCTGAGCCAACTGAAGGATCATCTGCGGAAGGGTGCGTGTCCTGCCTGCACATGCCTGTCTGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212320.2 |
||
| CDS GCA 90 bp | TCCCTTCCGCAGATGATCCTTCAGTTGGCTCAGCTCCCCTTGGGCTaGAAGCTGGTGGATAGAAAGGGAGTCCAGGGTGGCTGGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLPQMILQLAQLPLG*KLVDRKGVQGGWQS Trigger: GCTCTGCCAGCCACCCTGGACTCCCTTTCTATCCACCAGCTTGCAGCCCAAGGGGAGCTGAGCCAACTGAAGGATCATCTGCGGAAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS GCA 90 bp | ACCCTTCCGCAGATGATCCTTCAGTTGGCTCAGCTCCCCTTGGGCTaGAAGCTGGTGGATAGAAAGGGAGTCCAGGGTGGCTGGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLPQMILQLAQLPLG*KLVDRKGVQGGWQS Trigger: GCTCTGCCAGCCACCCTGGACTCCCTTTCTATCCACCAGCTTGCAGCCCAAGGGGAGCTGAGCCAACTGAAGGATCATCTGCGGAAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212320.2 |
||
| CDS CCA 90 bp | TCGGGGTCCACAGGCCCCAGGGTGCTCTGGAACAATCTGAGGATGTaGCTCTCCATCACCTGTTGCACTTTGCGGTATCCCAGGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SGSTGPRVLWNNLRM*LSITCCTLRYPRAT Trigger: AGTGGCCCTGGGATACCGCAAAGTGCAACAGGTGATGGAGAGCCACATCCTCAGATTGTTCCAGAGCACCCTGGGGCCTGTGGACCCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS GCA 90 bp | GTGGCTCTCCATCACCTGTTGCACTTTGCGGTATCCCAGGGCCACTaGGAGATCCATTGGGGTGTAGCCAGAGTCAGCCTCTGTGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VALHHLLHFAVSQGH*EIHWGVARVSLCGE Trigger: CTCACCACAGAGGCTGACTCTGGCTACACCCCAATGGATCTCGCAGTGGCCCTGGGATACCGCAAAGTGCAACAGGTGATGGAGAGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
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| CDS TCA 90 bp | TGCAAGCTGGTGGATAGAAAGGGAGTCCAGGGTGGCTGGCAGAGCTaGGACCTCATTCCCACGTTGCCGGTTTGTGAGGGTTGTGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CKLVDRKGVQGGWQS*DLIPTLPVCEGCGV Trigger: CACTCCACAACCCTCACAAACCGGCAACGTGGGAATGAGGTCTCAGCTCTGCCAGCCACCCTGGACTCCCTTTCTATCCACCAGCTTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGTCAGCCTCAACTACAGTTTGAGGCCAGCCTGGGTTACCTGAGACCCCCACAGATGATCCTTCAGTaGGCTCAGCTCCCCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QGQPQLQFEASLGYLRPPQMILQ*AQLPLG Trigger: GCCCAAGGGGAGCTGAGCCAACTGAAGGATCATCTG...TGGGGGTCTCAGGTAACCCAGGCTGGCCTCAAACTGTAGTTGAGGCTGACCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR CAA 90 bp | CAGGATGAAGAGACGTGCTGGAACTCTGACCAGGTGAGGTGCTTCTATACCCCTCCACTGCGAGATCCATaGGGGTGTAGCCAGAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QDEETCWNSDQVRCFYTPPLRDP*GCSQSQ Trigger: CTGACTCTGGCTACACCCCAATGGATCTCGCAGTGG...AGGGGTATAGAAGCACCTCACCTGGTCAGAGTTCCAGCACGTCTCTTCATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS-3UTR CAA 90 bp | CTTAGCCCATTTCTCCATTGCAGGTTCACGGGGTGGGGAGGCACTCAGCAAGATGTCAGGAACAGGAGGTaGCTGGTTTGGGACAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSPFLHCRFTGWGGTQQDVRNRR*LVWDKV Trigger: AACCTTGTCCCAAACCAGCAACCTCCTGTTCCTGAC...ATCTTGCTGAGTGCCTCCCCACCCCGTGAACCTGCAATGGAGAAATGGGCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS CAA 72 bp | CCCATACTGGCAAGTGACAGTGCGCTCTCCCGCTCCTaGGCCAGGATGTGGGGGTCAGCACCCCAGTCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: PILASDSALSRS*ARMWGSAPQSS Trigger: GCTAGACTGGGGTGCTGACCCCCACATCCTGGCCAAGGAGCGGGAGAGCGCACTGTCACTTGCCAGTATGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS TCA 72 bp | GATCCATTGGGGTGTAGCCAGAGTCAGCCTCTGTGGTaGGGTCAGCACCCCGGGCCAGTAAGGCCTCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: DPLGCSQSQPLW*GQHPGPVRPPH Trigger: GTGTGGAGGCCTTACTGGCCCGGGGTGCTGACCTCACCACAGAGGCTGACTCTGGCTACACCCCAATGGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS CCA 72 bp | CCATACTGGCAAGTGACAGTGCGCTCTCCCGCTCCTTaGCCAGGATGTGGGGGTCAGCACCCCAGTCTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PYWQVTVRSPAP*PGCGGQHPSLA Trigger: TGCTAGACTGGGGTGCTGACCCCCACATCCTGGCCAAGGAGCGGGAGAGCGCACTGTCACTTGCCAGTATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS TCA 72 bp | AGGCATGTGCAGGCAGGACACGCACCCTTCCGCAGATaGTCCTTCAGTTGGCTCAGCTCCCCTTGGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RHVQAGHAPFRR*SFSWLSSPWAA Trigger: TGCAGCCCAAGGGGAGCTGAGCCAACTGAAGGATCATCTGCGGAAGGGTGCGTGTCCTGCCTGCACATGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212320.2 |
||
| CDS CAA 72 bp | GGCAGGACACGCACCCTTCCGCAGATGATCCTTCAGTaGGCTCAGCTCCCCTTGGGCTGCAAGCTGGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GRTRTLPQMILQ*AQLPLGCKLVD Trigger: ATCCACCAGCTTGCAGCCCAAGGGGAGCTGAGCCAACTGAAGGATCATCTGCGGAAGGGTGCGTGTCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212320.2 |
||
| CDS CAA 90 bp | ACACGCACCCTTCCGCAGATGATCCTTCAGTTGGCTCAGCTCCCCTaGGGCTGCAAGCTGGTGGATAGAAAGGGAGTCCAGGGTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TRTLPQMILQLAQLP*GCKLVDRKGVQGGW Trigger: CCAGCCACCCTGGACTCCCTTTCTATCCACCAGCTTGCAGCCCAAGGGGAGCTGAGCCAACTGAAGGATCATCTGCGGAAGGGTGCGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212320.2 |
||
| CDS TCA 72 bp | CGGGGTCCACAGGCCCCAGGGTGCTCTGGAACAATCTaGGGATGTGGCTCTCCATCACCTGTTGCACTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RGPQAPGCSGTI*GCGSPSPVALC Trigger: GCAAAGTGCAACAGGTGATGGAGAGCCACATCCTCAGATTGTTCCAGAGCACCCTGGGGCCTGTGGACCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS CCA 72 bp | GGATGCACTGGCATCTGCTTCAGGATTCACAGCGTCTaGGGTGCAGGGGAACAGGCTGAGGACGACAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GCTGICFRIHSV*GAGEQAEDDSV Trigger: GACACTGTCGTCCTCAGCCTGTTCCCCTGCACCCCAGACGCTGTGAATCCTGAAGCAGATGCCAGTGCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS CCA 72 bp | TTCAGTTGGCTCAGCTCCCCTTGGGCTGCAAGCTGGTaGATAGAAAGGGAGTCCAGGGTGGCTGGCAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FSWLSSPWAASW*IERESRVAGRA Trigger: AGCTCTGCCAGCCACCCTGGACTCCCTTTCTATCCACCAGCTTGCAGCCCAAGGGGAGCTGAGCCAACTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS CCA 72 bp | TCCTTCAGTTGGCTCAGCTCCCCTTGGGCTGCAAGCTaGTGGATAGAAAGGGAGTCCAGGGTGGCTGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SFSWLSSPWAAS*WIERESRVAGR Trigger: TCTGCCAGCCACCCTGGACTCCCTTTCTATCCACCAGCTTGCAGCCCAAGGGGAGCTGAGCCAACTGAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS CCA 72 bp | CACTTTGCGGTATCCCAGGGCCACTGCGAGATCCATTaGGGTGTAGCCAGAGTCAGCCTCTGTGGTGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HFAVSQGHCEIH*GVARVSLCGEV Trigger: GACCTCACCACAGAGGCTGACTCTGGCTACACCCCAATGGATCTCGCAGTGGCCCTGGGATACCGCAAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS CAA 90 bp | GCATGTGCAGGCAGGACACGCACCCTTCCGCAGATGATCCTTCAGTaGGCTCAGCTCCCCTTGGGCTGCAAGCTGGTGGATAGAAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ACAGRTRTLPQMILQ*AQLPLGCKLVDRKG Trigger: TCCCTTTCTATCCACCAGCTTGCAGCCCAAGGGGAGCTGAGCCAACTGAAGGATCATCTGCGGAAGGGTGCGTGTCCTGCCTGCACATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212320.2 |
||
| CDS CAA 90 bp | GTTGTTTCCCTTCCGCAGATGATCCTTCAGTTGGCTCAGCTCCCCTaGGGCTGCAAGCTGGTGGATAGAAAGGGAGTCCAGGGTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VVSLPQMILQLAQLP*GCKLVDRKGVQGGW Trigger: CCAGCCACCCTGGACTCCCTTTCTATCCACCAGCTTGCAGCCCAAGGGGAGCTGAGCCAACTGAAGGATCATCTGCGGAAGGGAAACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS CCA 72 bp | ACAGGCCCCAGGGTGCTCTGGAACAATCTGAGGATGTaGCTCTCCATCACCTGTTGCACTTTGCGGTATCCC | + |
|
Preference number: 6 (lower is better) Translates to: TGPRVLWNNLRM*LSITCCTLRYP Trigger: GGGATACCGCAAAGTGCAACAGGTGATGGAGAGCCACATCCTCAGATTGTTCCAGAGCACCCTGGGGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS CCA 72 bp | GGACGACAGTGTCTGAGTTCTCTGGGGACTCATCTCTaGTGTCCTCAGGATCCTCTAGGTCAGGAACAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRQCLSSLGTHL*CPQDPLGQEQE Trigger: CTCCTGTTCCTGACCTAGAGGATCCTGAGGACACCAGAGATGAGTCCCCAGAGAACTCAGACACTGTCGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS CAA 72 bp | CAGGATCCTCTAGGTCAGGAACAGGAGGTTGCTGGTTaGGGACAAGGTTCTCTGCAACCTGAGTGGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QDPLGQEQEVAG*GQGSLQPEWAP Trigger: TGGAGCCCACTCAGGTTGCAGAGAACCTTGTCCCAAACCAGCAACCTCCTGTTCCTGACCTAGAGGATCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS CAA 72 bp | GATCAGGTTGTTTCCCTTCCGCAGATGATCCTTCAGTaGGCTCAGCTCCCCTTGGGCTGCAAGCTGGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: DQVVSLPQMILQ*AQLPLGCKLVD Trigger: ATCCACCAGCTTGCAGCCCAAGGGGAGCTGAGCCAACTGAAGGATCATCTGCGGAAGGGAAACAACCTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS CAA 90 bp | CGGTTTGTTGATCAGGTTGTTTCCCTTCCGCAGATGATCCTTCAGTaGGCTCAGCTCCCCTTGGGCTGCAAGCTGGTGGATAGAAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RFVDQVVSLPQMILQ*AQLPLGCKLVDRKG Trigger: TCCCTTTCTATCCACCAGCTTGCAGCCCAAGGGGAGCTGAGCCAACTGAAGGATCATCTGCGGAAGGGAAACAACCTGATCAACAAACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075724.9 |
||
| CDS TCA 72 bp | GAGGGTTGTGGAGTGCTTCAAGAAACTTCCCTGCAGTaGGGATGCACTGGCATCTGCTTCAGGATTCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: EGCGVLQETSLQ*GCTGICFRIHS Trigger: GCTGTGAATCCTGAAGCAGATGCCAGTGCATCCTCACTGCAGGGAAGTTTCTTGAAGCACTCCACAACCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS GCA 72 bp | TCATTCCCACGTTGCCGGTTTGTGAGGGTTGTGGAGTaGTTCAAGAAACTTCCCTGCAGTGAGGATGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SFPRCRFVRVVE*FKKLPCSEDAL Trigger: CAGTGCATCCTCACTGCAGGGAAGTTTCTTGAAGCACTCCACAACCCTCACAAACCGGCAACGTGGGAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS TCA 72 bp | AGAGCAGTGGTGTTCCTCCATTCCAGTCATAGATGTTaGTGTCCACGTCACGGTCAAGCAGCAACCTCACGA | + |
|
Preference number: 6 (lower is better) Translates to: RAVVFLHSSHRC*CPRHGQAATSR Trigger: TCGTGAGGTTGCTGCTTGACCGTGACGTGGACATCAACATCTATGACTGGAATGGAGGAACACCACTGCTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
||
| CDS GCA 72 bp | TTTGTGAGGGTTGTGGAGTGCTTCAAGAAACTTCCCTaGAGTGAGGATGCACTGGCATCTGCTTCAGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: FVRVVECFKKLP*SEDALASASGF Trigger: GAATCCTGAAGCAGATGCCAGTGCATCCTCACTGCAGGGAAGTTTCTTGAAGCACTCCACAACCCTCACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075724.9 ENSMUST00000212320.2 |
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