Pregenerated sensors for RFX8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057173Ensembl transcript IDs: ENSMUST00000151913.3
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACGCTGCCCATGCCCATaGGACCGCAGCTCTGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: YKNFRVPHMFGELKPASSRCPCP*DRSSGS Trigger: CGAGCCAGAGCTGCGGTCCCATGGGCATGGGCAGCG...TGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR GCA 90 bp | CAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTGGCACTTCCTCGTGTaGCCAGCCTCCGGGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QYKNFRVPHMFGELKPASWHFLV*PASGCP Trigger: TGGGCACCCGGAGGCTGGGCACACGAGGAAGTGCCA...GGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | ACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACTCTGACAGCAGGTCCTaGAGGCTCCCCAGGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TKTLGFHTCLENSSLLPHSDSRS*RLPRSS Trigger: GGAGGACCTGGGGAGCCTCCAGGACCTGCTGTCAGA...GTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR TCA 90 bp | ACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACCAGCGTCACCTGAGGTaGCTCCACATTCCGGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: TKTLGFHTCLENSSLLPHQRHLR*LHIPAC Trigger: GCAAGCCGGAATGTGGAGTCACCTCAGGTGACGCTG...GTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | AAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACACGGGTGGAAAAGGGCCTaGTCTGGCTGGGTGAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: KNFRVPHMFGELKPASSHGWKRA*SGWVRN Trigger: GTTCCTCACCCAGCCAGACCAGGCCCTTTTCCACCC...GTGTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | ACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACAGGAAGCCCAGCACCTaGAGAACCACGCTGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: TKTLGFHTCLENSSLLPHRKPST*RTTLPM Trigger: CATGGGCAGCGTGGTTCTCCAGGTGCTGGGCTTCCT...GTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR TCA 90 bp | AAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACACGAGGAACTGGTCATCTaGCAGCAGGTCCTGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KNFRVPHMFGELKPASSHEELVI*QQVLEA Trigger: AGCCTCCAGGACCTGCTGTCAGATGACCAGTTCCTC...GTGTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR TCA 90 bp | AAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACACCCTGGTCTGGCTGGGTaGGGAACTGGTCATCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KNFRVPHMFGELKPASSHPGLAG*GTGHLT Trigger: TGTCAGATGACCAGTTCCTCACCCAGCCAGACCAGG...GTGTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR TCA 90 bp | TACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCAGGGTTGACTTGGTTCTaGGCACTCTGCCCACAGGTC | + |
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Preference number: 4 (lower is better) Translates to: YKNFRVPHMFGELKPASSGLTWF*ALCPQV Trigger: GACCTGTGGGCAGAGTGCTCAGAACCAAGTCAACCC...TGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR TCA 90 bp | AAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACACTCCAAGAGCAGCAGATaGAACAGATGCCAGGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: KNFRVPHMFGELKPASSHSKSSR*NRCQAP Trigger: CGGTGCCTGGCATCTGTTTCATCTGCTGCTCTTGGA...GTGTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | TACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCAAGGGCCTGGTCTGGCTaGGTGAGGAACTGGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: YKNFRVPHMFGELKPASSRAWSG*VRNWSS Trigger: AGATGACCAGTTCCTCACCCAGCCAGACCAGGCCCT...TGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | CAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCGAAAAGGGCCTGGTCTaGCTGGGTGAGGAACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QYKNFRVPHMFGELKPASEKGLV*LGEELV Trigger: GACCAGTTCCTCACCCAGCCAGACCAGGCCCTTTTC...GGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | ACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACCAAGCTTATTGCCTGTaGCGGTGTCCACCAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: TKTLGFHTCLENSSLLPHQAYCL*RCPPGS Trigger: GCTTCCTGGTGGACACCGCCACAGGCAATAAGCTTG...GTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR TCA 90 bp | ACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACTTGTCAACCAGCCATTaGATGATACCCCGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TKTLGFHTCLENSSLLPHLSTSH*MIPRCR Trigger: CCTGCACCGGGGTATCATTCAATGGCTGGTTGACAA...GTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR TCA 90 bp | TACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCAAGACCGGACATCTTCTaGATGGAGACACAGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: YKNFRVPHMFGELKPASSRPDIF*METQVS Trigger: GCTCACCTGTGTCTCCATTCAGAAGATGTCCGGTCT...TGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | CGAGATCAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTCTCTGTGTGGCTCTCTaGCTCCTCTTCATGGTCGGA | + |
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Preference number: 4 (lower is better) Translates to: RDQYKNFRVPHMFGELKPLCVAL*LLFMVG Trigger: TCCGACCATGAAGAGGAGCCAGAGAGCCACACAGAG...AGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTGATCTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | TACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACTTCCCAAATGTCGCTaGGTTGACTTGGTTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YKNFRVPHMFGELKPASSLPKCR*VDLVLS Trigger: GCTCAGAACCAAGTCAACCCAGCGACATTTGGGAAG...TGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | ACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACCATTTCATCTCTGTGTaGCTCTCTGGCTCCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: TKTLGFHTCLENSSLLPHHFISV*LSGSSS Trigger: TGAAGAGGAGCCAGAGAGCCACACAGAGATGAAATG...GTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | CGAGATCAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTCCGAAACTGTCTCTGTaGCTCAGGGTCATGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: RDQYKNFRVPHMFGELKPPKLSL*LRVMAL Trigger: CAAAGCCATGACCCTGAGCCACAGAGACAGTTTCGG...AGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTGATCTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | CGAGATCAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTAAAGAATCCAGAGGGTaGAAAAGGGCCTGGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RDQYKNFRVPHMFGELKPKESRG*KRAWSG Trigger: GCCAGACCAGGCCCTTTTCCACCCTCTGGATTCTTT...AGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTGATCTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR TCA 90 bp | ACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACATAAGATTGCCACTGTaGCAGCTCTTTTTACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKTLGFHTCLENSSLLPHIRLPL*QLFLPS Trigger: GCTGGGTAAAAAGAGCTGTCACAGTGGCAATCTTAT...GTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCAACAGGAGTACTTGTTTaGCAGCTCTTGTTCCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: YKNFRVPHMFGELKPASSTGVLV*QLLFPD Trigger: GTCTGGGAACAAGAGCTGGCAAACAAGTACTCCTGT...TGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR GCA 90 bp | AAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACACATGACTGTGTCTTGCTaGCGAGATTTCCAGAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: KNFRVPHMFGELKPASSHMTVSC*RDFQKD Trigger: ATCCTTCTGGAAATCTCGGCAGCAAGACACAGTCAT...GTGTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR GCA 90 bp | AAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACACTCGCGTTGCTTTTCCTaGAATACGTGTTTTCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: KNFRVPHMFGELKPASSHSRCFS*NTCFLS Trigger: GCTCAGAAAACACGTATTGCAGGAAAAGCAACGCGA...GTGTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | CAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCGTCTTCGCCATGTTaGAAAGGTACGTCTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: QYKNFRVPHMFGELKPASSSSPC*KGTSFS Trigger: GGAGAAAGACGTACCTTTCCAACATGGCGAAGACGA...GGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | TACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCATGCACATTCCGATGTTaGCAAAGAATCCAGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: YKNFRVPHMFGELKPASSCTFRC*QRIQRV Trigger: CACCCTCTGGATTCTTTGCCAACATCGGAATGTGCA...TGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | AAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACACGTGTTTTCTGAGCTTTaGGGCACATCTGATATGTGG | + |
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Preference number: 4 (lower is better) Translates to: KNFRVPHMFGELKPASSHVFSEL*GTSDMW Trigger: CCACATATCAGATGTGCCCCAAAGCTCAGAAAACAC...GTGTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR TCA 90 bp | TACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACATGACTCCAGGATGTaGATCACATATTCCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: YKNFRVPHMFGELKPASSHDSRM*ITYSKS Trigger: GCTCTTGGAATATGTGATTCACATCCTGGAGTCATG...TGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR TCA 90 bp | CGAGATCAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTCTCCTCTTCTATGCATaGCTCCAGGATGTGAATCAC | + |
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Preference number: 4 (lower is better) Translates to: RDQYKNFRVPHMFGELKPLLFYA*LQDVNH Trigger: GTGATTCACATCCTGGAGTCATGCATAGAAGAGGAG...AGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTGATCTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR GCA 90 bp | AAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACACCCTGCTGGAGAACGTTaGTATAGTCAGGAAATTTTC | + |
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Preference number: 4 (lower is better) Translates to: KNFRVPHMFGELKPASSHPAGER*YSQEIF Trigger: GAAAATTTCCTGACTATAGCAACGTTCTCCAGCAGG...GTGTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR GCA 90 bp | CGAGATCAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTAGCATGACTGTGTCTTaGTGCCGAGATTTCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: RDQYKNFRVPHMFGELKPSMTVS*CRDFQK Trigger: CTTCTGGAAATCTCGGCAGCAAGACACAGTCATGCT...AGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTGATCTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | TACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCAGGCACATCTGATATGTaGATCACAAACCTCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: YKNFRVPHMFGELKPASSGTSDM*ITNLCP Trigger: TGGACAGAGGTTTGTGATCCACATATCAGATGTGCC...TGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCAAATCCTCTTTGTTTTTaGTCGGCTGGAAGACAAGCA | + |
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Preference number: 4 (lower is better) Translates to: YKNFRVPHMFGELKPASSNPLCF*SAGRQA Trigger: TGCTTGTCTTCCAGCCGAGCAAAAACAAAGAGGATT...TGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR GCA 90 bp | CGAGATCAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTCTTCCTCCTCTTCTATaGATGACTCCAGGATGTGAA | + |
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Preference number: 4 (lower is better) Translates to: RDQYKNFRVPHMFGELKPLPPLL*MTPGCE Trigger: TTCACATCCTGGAGTCATGCATAGAAGAGGAGGAAG...AGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTGATCTCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR CCA 90 bp | CGAGATCAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTACAGATTTCAGGTACTaGATACTAACGTCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RDQYKNFRVPHMFGELKPTDFRY*ILTSSR Trigger: CCTGGAGGACGTTAGTATCCAGTACCTGAAATCTGT...AGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTGATCTCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR TCA 90 bp | AAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACACTTCAGCAAGATCTGTTaGAGTTTCCAGCAAAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: KNFRVPHMFGELKPASSHFSKIC*SFQQRN Trigger: ATTTCTTTGCTGGAAACTTCAACAGATCTTGCTGAA...GTGTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS-3UTR TCA 90 bp | CGAGATCAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTAGAAGGAGCTCTTCTTaGTGTAGATCCCATCATAAT | + |
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Preference number: 4 (lower is better) Translates to: RDQYKNFRVPHMFGELKPRRSSS*CRSHHN Trigger: ATTATGATGGGATCTACATCAAGAAGAGCTCCTTCT...AGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTGATCTCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS CCA 90 bp | CCACCAGGAAGCCCAGCACCTGGAGAACCACGCTGCCCATGCCCATaGGACCGCAGCTCTGGCTCGTGTGTTTCAGCGTCACCTGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: PPGSPAPGEPRCPCP*DRSSGSCVSASPEV Trigger: CACCTCAGGTGACGCTGAAACACACGAGCCAGAGCTGCGGTCCCATGGGCATGGGCAGCGTGGTTCTCCAGGTGCTGGGCTTCCTGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS CCA 90 bp | ACAAGCTTATTGCCTGTGGCGGTGTCCACCAGGAAGCCCAGCACCTaGAGAACCACGCTGCCCATGCCCATGGGACCGCAGCTCTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: TSLLPVAVSTRKPST*RTTLPMPMGPQLWL Trigger: GAGCCAGAGCTGCGGTCCCATGGGCATGGGCAGCGTGGTTCTCCAGGTGCTGGGCTTCCTGGTGGACACCGCCACAGGCAATAAGCTTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS CCA 90 bp | GATGTTGGCAAAGAATCCAGAGGGTGGAAAAGGGCCTGGTCTGGCTaGGTGAGGAACTGGTCATCTGACAGCAGGTCCTGGAGGCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: DVGKESRGWKRAWSG*VRNWSSDSRSWRLP Trigger: GGGGAGCCTCCAGGACCTGCTGTCAGATGACCAGTTCCTCACCCAGCCAGACCAGGCCCTTTTCCACCCTCTGGATTCTTTGCCAACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS GCA 90 bp | CATCATAATGATACCTGGCACTTCCTCGTGTGCCCAGCCTCCGGGTaGCCAGGTCAGGGAAAACCAAGCGCACAAGCTTCCCAAATGTCG | + |
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Preference number: 5 (lower is better) Translates to: HHNDTWHFLVCPASG*PGQGKPSAQASQMS Trigger: CGACATTTGGGAAGCTTGTGCGCTTGGTTTTCCCTGACCTGGGCACCCGGAGGCTGGGCACACGAGGAAGTGCCAGGTATCATTATGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS CCA 90 bp | CTGAGCTTCACAGCGCTCTCAGTGGTTTTGTCCTCCAGCAATACCTaGACAAGCTTATTGCCTGTGGCGGTGTCCACCAGGAAGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LSFTALSVVLSSSNT*TSLLPVAVSTRKPS Trigger: GCTGGGCTTCCTGGTGGACACCGCCACAGGCAATAAGCTTGTCCAGGTATTGCTGGAGGACAAAACCACTGAGAGCGCTGTGAAGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS CCA 90 bp | GCCCAGGTCAGGGAAAACCAAGCGCACAAGCTTCCCAAATGTCGCTaGGTTGACTTGGTTCTGAGCACTCTGCCCACAGGTCTCGACATA | + |
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Preference number: 5 (lower is better) Translates to: AQVRENQAHKLPKCR*VDLVLSTLPTGLDI Trigger: TATGTCGAGACCTGTGGGCAGAGTGCTCAGAACCAAGTCAACCCAGCGACATTTGGGAAGCTTGTGCGCTTGGTTTTCCCTGACCTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS CCA 90 bp | ACATTCCGGCTTGCACATTCCGATGTTGGCAAAGAATCCAGAGGGTaGAAAAGGGCCTGGTCTGGCTGGGTGAGGAACTGGTCATCTGAC | + |
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Preference number: 5 (lower is better) Translates to: TFRLAHSDVGKESRG*KRAWSGWVRNWSSD Trigger: GTCAGATGACCAGTTCCTCACCCAGCCAGACCAGGCCCTTTTCCACCCTCTGGATTCTTTGCCAACATCGGAATGTGCAAGCCGGAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS GCA 90 bp | AGCTGGCGCACGTCGGGCAGAGACATGAGCATGACTGTGTCTTGCTaGCGAGATTTCCAGAAGGATGTGATTAAATCCTCCACCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SWRTSGRDMSMTVSC*RDFQKDVIKSSTFS Trigger: GGAGAAGGTGGAGGATTTAATCACATCCTTCTGGAAATCTCGGCAGCAAGACACAGTCATGCTCATGTCTCTGCCCGACGTGCGCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS TCA 90 bp | GGTCAGGGAAAACCAAGCGCACAAGCTTCCCAAATGTCGCTGGGTTaGCTTGGTTCTGAGCACTCTGCCCACAGGTCTCGACATAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: GQGKPSAQASQMSLG*LGSEHSAHRSRHKS Trigger: AGATTTATGTCGAGACCTGTGGGCAGAGTGCTCAGAACCAAGTCAACCCAGCGACATTTGGGAAGCTTGTGCGCTTGGTTTTCCCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS GCA 90 bp | AAGAGCTGGCGCACGTCGGGCAGAGACATGAGCATGACTGTGTCTTaGTGCCGAGATTTCCAGAAGGATGTGATTAAATCCTCCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSWRTSGRDMSMTVS*CRDFQKDVIKSSTF Trigger: GAAGGTGGAGGATTTAATCACATCCTTCTGGAAATCTCGGCAGCAAGACACAGTCATGCTCATGTCTCTGCCCGACGTGCGCCAGCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS TCA 90 bp | AGGAGTACTTGTTTGCCAGCTCTTGTTCCCAGACCGGACATCTTCTaGATGGAGACACAGGTGAGCCCATCGGGTCCTTCTTTATTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSTCLPALVPRPDIF*METQVSPSGPSLLV Trigger: CACCAATAAAGAAGGACCCGATGGGCTCACCTGTGTCTCCATTCAGAAGATGTCCGGTCTGGGAACAAGAGCTGGCAAACAAGTACTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CCA 90 bp | CAGCCTAAGCATTTCATCTCTGTGTGGCTCTCTGGCTCCTCTTCATaGTCGGAGTCACCTTCCAGGACCTTCTTCGAAATATCCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QPKHFISVWLSGSSS*SESPSRTFFEISRV Trigger: CACTCTGGATATTTCGAAGAAGGTCCTGGAAGGTGACTCCGACCATGAAGAGGAGCCAGAGAGCCACACAGAGATGAAATGCTTAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS-3UTR CAA 90 bp | ACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACCTCAGGGTCATGGCTTaGCTCACGGCGGTGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TKTLGFHTCLENSSLLPHLRVMA*LTAVRR Trigger: TCTTCTCACCGCCGTGAGCAAAGCCATGACCCTGAG...GTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS-3UTR CAA 90 bp | TACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCATGTCGCTGGGTTGACTaGGTTCTGAGCACTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YKNFRVPHMFGELKPASSCRWVD*VLSTLP Trigger: GGGCAGAGTGCTCAGAACCAAGTCAACCCAGCGACA...TGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS-3UTR CAA 90 bp | CGAGATCAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGGTTATGAGGGCCTCTaGTCCCACGGGAAGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RDQYKNFRVPHMFGELKPGYEGL*SHGKAE Trigger: CTCAGCCTTCCCGTGGGACAAGAGGCCCTCATAACC...AGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTGATCTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CCA 90 bp | AAGCTGGCAGCGAGCTTGATAAAATCCTCTTTGTTTTTGCTCGGCTaGAAGACAAGCACTTGGAGGTTTGAAGACACACAGTTCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KLAASLIKSSLFLLG*KTSTWRFEDTQFRS Trigger: ACTCCTGAACTGTGTGTCTTCAAACCTCCAAGTGCTTGTCTTCCAGCCGAGCAAAAACAAAGAGGATTTTATCAAGCTCGCTGCCAGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS-3UTR CAA 90 bp | CGAGATCAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCGCTCTCAGTGGTTTaGTCCTCCAGCAATACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RDQYKNFRVPHMFGELKPALSVV*SSSNTW Trigger: CCAGGTATTGCTGGAGGACAAAACCACTGAGAGCGC...AGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTGATCTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS-3UTR CAA 90 bp | CAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCGAGCATGACTGTGTCTaGCTGCCGAGATTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QYKNFRVPHMFGELKPASEHDCV*LPRFPE Trigger: TTCTGGAAATCTCGGCAGCAAGACACAGTCATGCTC...GGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS-3UTR CAA 90 bp | CAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCAGCTTACAGGAGTACTaGTTTGCCAGCTCTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QYKNFRVPHMFGELKPASSLQEY*FASSCS Trigger: GGAACAAGAGCTGGCAAACAAGTACTCCTGTAAGCT...GGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS-3UTR CAA 90 bp | TACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCAATCGTCTTCGCCATGTaGGAAAGGTACGTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: YKNFRVPHMFGELKPASSIVFAM*ERYVFL Trigger: GAGAAAGACGTACCTTTCCAACATGGCGAAGACGAT...TGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS-3UTR CAA 90 bp | AAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACACAAGCTGGCAGCGAGCTaGATAAAATCCTCTTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KNFRVPHMFGELKPASSHKLAAS*IKSSLF Trigger: AAACAAAGAGGATTTTATCAAGCTCGCTGCCAGCTT...GTGTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS-3UTR CAA 90 bp | ACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACAAAATTCCATTTCAGTaGAAAGCTGGCAGCGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TKTLGFHTCLENSSLLPHKIPFQ*KAGSEL Trigger: AAGCTCGCTGCCAGCTTTCAACTGAAATGGAATTTT...GTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS-3UTR CAA 90 bp | CGAGATCAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTTTGCACATTCCGATGTaGGCAAAGAATCCAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RDQYKNFRVPHMFGELKPLHIPM*AKNPEG Trigger: ACCCTCTGGATTCTTTGCCAACATCGGAATGTGCAA...AGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTGATCTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS-3UTR CAA 90 bp | AAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTCACACTCGGGTCCTTCTTTATaGGTGAATGATTTTCACATG | + |
|
Preference number: 5 (lower is better) Translates to: KNFRVPHMFGELKPASSHSGPSL*VNDFHM Trigger: CATGTGAAAATCATTCACCAATAAAGAAGGACCCGA...GTGTGAGGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS-3UTR CAA 90 bp | CAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGCTTCCTTTCTCCTGAGTCTTTaGACGAATCCAGTGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QYKNFRVPHMFGELKPASFLLSL*TNPVTS Trigger: AGAAGTCACTGGATTCGTCAAAAGACTCAGGAGAAA...GGAAGCAGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS-3UTR CAA 90 bp | CGAGATCAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTGTTCAGCAAGATCTGTaGAAGTTTCCAGCAAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RDQYKNFRVPHMFGELKPVQQDL*KFPAKK Trigger: TTTCTTTGCTGGAAACTTCAACAGATCTTGCTGAAC...AGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTGATCTCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS-3UTR CAA 90 bp | CGAGATCAATACAAAAACTTTAGGGTTCCACACATGTTTGGAGAACTCAAGCCTTTGATAAAATCCTCTTaGTTTTTGCTCGGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RDQYKNFRVPHMFGELKPLIKSS*FLLGWK Trigger: CTTCCAGCCGAGCAAAAACAAAGAGGATTTTATCAA...AGGCTTGAGTTCTCCAAACATGTGTGGAACCCTAAAGTTTTTGTATTGATCTCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CCA 72 bp | TTGCCTGTGGCGGTGTCCACCAGGAAGCCCAGCACCTaGAGAACCACGCTGCCCATGCCCATGGGACCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LPVAVSTRKPST*RTTLPMPMGPQ Trigger: CTGCGGTCCCATGGGCATGGGCAGCGTGGTTCTCCAGGTGCTGGGCTTCCTGGTGGACACCGCCACAGGCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS GCA 72 bp | CCAGGAAGCCCAGCACCTGGAGAACCACGCTGCCCATaGCCATGGGACCGCAGCTCTGGCTCGTGTGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PGSPAPGEPRCP*PWDRSSGSCVS Trigger: TGAAACACACGAGCCAGAGCTGCGGTCCCATGGGCATGGGCAGCGTGGTTCTCCAGGTGCTGGGCTTCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS TCA 72 bp | AATCCAGAGGGTGGAAAAGGGCCTGGTCTGGCTGGGTaGGGAACTGGTCATCTGACAGCAGGTCCTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: NPEGGKGPGLAG*GTGHLTAGPGG Trigger: GCCTCCAGGACCTGCTGTCAGATGACCAGTTCCTCACCCAGCCAGACCAGGCCCTTTTCCACCCTCTGGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CAA 90 bp | GGGCACGCTGAACCCTTCACAGATGCAGAAATTGTCAACCAGCCATaGAATGATACCCCGGTGCAGGCCCAGGCCACTCGCAGGAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GHAEPFTDAEIVNQP*NDTPVQAQATRRRG Trigger: GCCTCTCCTGCGAGTGGCCTGGGCCTGCACCGGGGTATCATTCAATGGCTGGTTGACAATTTCTGCATCTGTGAAGGGTTCAGCGTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CAA 90 bp | GCGTCACCTGAGGTGACTCCACATTCCGGCTTGCACATTCCGATGTaGGCAAAGAATCCAGAGGGTGGAAAAGGGCCTGGTCTGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ASPEVTPHSGLHIPM*AKNPEGGKGPGLAG Trigger: CCCAGCCAGACCAGGCCCTTTTCCACCCTCTGGATTCTTTGCCAACATCGGAATGTGCAAGCCGGAATGTGGAGTCACCTCAGGTGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS TCA 72 bp | GCAGCTCTGGCTCGTGTGTTTCAGCGTCACCTGAGGTaGCTCCACATTCCGGCTTGCACATTCCGATGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AALARVFQRHLR*LHIPACTFRCW Trigger: CCAACATCGGAATGTGCAAGCCGGAATGTGGAGTCACCTCAGGTGACGCTGAAACACACGAGCCAGAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS GCA 72 bp | AGATCCCATCATAATGATACCTGGCACTTCCTCGTGTaGCCAGCCTCCGGGTGCCCAGGTCAGGGAAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: RSHHNDTWHFLV*PASGCPGQGKP Trigger: TGGTTTTCCCTGACCTGGGCACCCGGAGGCTGGGCACACGAGGAAGTGCCAGGTATCATTATGATGGGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CCA 72 bp | AAAGAATCCAGAGGGTGGAAAAGGGCCTGGTCTGGCTaGGTGAGGAACTGGTCATCTGACAGCAGGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KESRGWKRAWSG*VRNWSSDSRSW Trigger: CCAGGACCTGCTGTCAGATGACCAGTTCCTCACCCAGCCAGACCAGGCCCTTTTCCACCCTCTGGATTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CAA 90 bp | TCTTGTCCCACGGGAAGGCTGAGCTTCACAGCGCTCTCAGTGGTTTaGTCCTCCAGCAATACCTGGACAAGCTTATTGCCTGTGGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SCPTGRLSFTALSVV*SSSNTWTSLLPVAV Trigger: CACCGCCACAGGCAATAAGCTTGTCCAGGTATTGCTGGAGGACAAAACCACTGAGAGCGCTGTGAAGCTCAGCCTTCCCGTGGGACAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS GCA 72 bp | TGGTTTTGTCCTCCAGCAATACCTGGACAAGCTTATTaGCTGTGGCGGTGTCCACCAGGAAGCCCAGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: WFCPPAIPGQAY*LWRCPPGSPAP Trigger: AGGTGCTGGGCTTCCTGGTGGACACCGCCACAGGCAATAAGCTTGTCCAGGTATTGCTGGAGGACAAAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CCA 72 bp | ACAGCGCTCTCAGTGGTTTTGTCCTCCAGCAATACCTaGACAAGCTTATTGCCTGTGGCGGTGTCCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TALSVVLSSSNT*TSLLPVAVSTR Trigger: CCTGGTGGACACCGCCACAGGCAATAAGCTTGTCCAGGTATTGCTGGAGGACAAAACCACTGAGAGCGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CAA 72 bp | GAACCCTTCACAGATGCAGAAATTGTCAACCAGCCATaGAATGATACCCCGGTGCAGGCCCAGGCCACTCGC | + |
|
Preference number: 6 (lower is better) Translates to: EPFTDAEIVNQP*NDTPVQAQATR Trigger: GCGAGTGGCCTGGGCCTGCACCGGGGTATCATTCAATGGCTGGTTGACAATTTCTGCATCTGTGAAGGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS TCA 72 bp | AACCCTTCACAGATGCAGAAATTGTCAACCAGCCATTaGATGATACCCCGGTGCAGGCCCAGGCCACTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: NPSQMQKLSTSH*MIPRCRPRPLA Trigger: TGCGAGTGGCCTGGGCCTGCACCGGGGTATCATTCAATGGCTGGTTGACAATTTCTGCATCTGTGAAGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS TCA 72 bp | TGTTTGCCAGCTCTTGTTCCCAGACCGGACATCTTCTaGATGGAGACACAGGTGAGCCCATCGGGTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CLPALVPRPDIF*METQVSPSGPS Trigger: AGAAGGACCCGATGGGCTCACCTGTGTCTCCATTCAGAAGATGTCCGGTCTGGGAACAAGAGCTGGCAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CAA 72 bp | CAAGCGCACAAGCTTCCCAAATGTCGCTGGGTTGACTaGGTTCTGAGCACTCTGCCCACAGGTCTCGACATA | + |
|
Preference number: 6 (lower is better) Translates to: QAHKLPKCRWVD*VLSTLPTGLDI Trigger: TATGTCGAGACCTGTGGGCAGAGTGCTCAGAACCAAGTCAACCCAGCGACATTTGGGAAGCTTGTGCGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CAA 72 bp | GAGGTGACTCCACATTCCGGCTTGCACATTCCGATGTaGGCAAAGAATCCAGAGGGTGGAAAAGGGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: EVTPHSGLHIPM*AKNPEGGKGPG Trigger: ACCAGGCCCTTTTCCACCCTCTGGATTCTTTGCCAACATCGGAATGTGCAAGCCGGAATGTGGAGTCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CAA 72 bp | ACGGGAAGGCTGAGCTTCACAGCGCTCTCAGTGGTTTaGTCCTCCAGCAATACCTGGACAAGCTTATTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TGRLSFTALSVV*SSSNTWTSLLP Trigger: AGGCAATAAGCTTGTCCAGGTATTGCTGGAGGACAAAACCACTGAGAGCGCTGTGAAGCTCAGCCTTCCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS TCA 72 bp | ATCCAGAGTGCCTTCTCTGATGATGGCACGAAGGTCTaGCTTCAAGAGGCCGATTCTCCTGCTGTTCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: IQSAFSDDGTKV*LQEADSPAVLQ Trigger: CTGAAGAACAGCAGGAGAATCGGCCTCTTGAAGTCAGACCTTCGTGCCATCATCAGAGAAGGCACTCTGGAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS GCA 72 bp | CGCACGTCGGGCAGAGACATGAGCATGACTGTGTCTTaGTGCCGAGATTTCCAGAAGGATGTGATTAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: RTSGRDMSMTVS*CRDFQKDVIKS Trigger: GGATTTAATCACATCCTTCTGGAAATCTCGGCAGCAAGACACAGTCATGCTCATGTCTCTGCCCGACGTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CAA 72 bp | GACCACCAGCTTACAGGAGTACTTGTTTGCCAGCTCTaGTTCCCAGACCGGACATCTTCTGAATGGAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: DHQLTGVLVCQL*FPDRTSSEWRH Trigger: GTGTCTCCATTCAGAAGATGTCCGGTCTGGGAACAAGAGCTGGCAAACAAGTACTCCTGTAAGCTGGTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CAA 72 bp | GCACCGAAACTGTCTCTGTGGCTCAGGGTCATGGCTTaGCTCACGGCGGTGAGAAGAAAATTCCATTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: APKLSLWLRVMA*LTAVRRKFHFS Trigger: ACTGAAATGGAATTTTCTTCTCACCGCCGTGAGCAAAGCCATGACCCTGAGCCACAGAGACAGTTTCGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CAA 72 bp | GGCACATCTGATATGTGGATCACAAACCTCTGTCCATaGCTTAGGGTTATGAGGGCCTCTTGTCCCACGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GTSDMWITNLCP*LRVMRASCPTG Trigger: TCCCGTGGGACAAGAGGCCCTCATAACCCTAAGCAATGGACAGAGGTTTGTGATCCACATATCAGATGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CAA 90 bp | AGGGAAAACCAAGCGCACAAGCTTCCCAAATGTCGCTGGGTTGACTaGGTTCTGAGCACTCTGCCCACAGGTCTCGACATAAATCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: RENQAHKLPKCRWVD*VLSTLPTGLDINLI Trigger: TATGAGATTTATGTCGAGACCTGTGGGCAGAGTGCTCAGAACCAAGTCAACCCAGCGACATTTGGGAAGCTTGTGCGCTTGGTTTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CCA 72 bp | CATTTCATCTCTGTGTGGCTCTCTGGCTCCTCTTCATaGTCGGAGTCACCTTCCAGGACCTTCTTCGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: HFISVWLSGSSS*SESPSRTFFEI Trigger: TATTTCGAAGAAGGTCCTGGAAGGTGACTCCGACCATGAAGAGGAGCCAGAGAGCCACACAGAGATGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CAA 72 bp | TCATCAGCAAGAAAGACCACCAGCTTACAGGAGTACTaGTTTGCCAGCTCTTGTTCCCAGACCGGACATCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSARKTTSLQEY*FASSCSQTGHL Trigger: AAGATGTCCGGTCTGGGAACAAGAGCTGGCAAACAAGTACTCCTGTAAGCTGGTGGTCTTTCTTGCTGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CAA 90 bp | TTGCAGTATTCATCAGCAAGAAAGACCACCAGCTTACAGGAGTACTaGTTTGCCAGCTCTTGTTCCCAGACCGGACATCTTCTGAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: LQYSSARKTTSLQEY*FASSCSQTGHLLNG Trigger: TCCATTCAGAAGATGTCCGGTCTGGGAACAAGAGCTGGCAAACAAGTACTCCTGTAAGCTGGTGGTCTTTCTTGCTGATGAATACTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CAA 90 bp | AGGTACGTCTTTCTCCTGAGTCTTTTGACGAATCCAGTGACTTCTTaGAGCTTAGAGATCTGTAAGATGGCAGGAAACCCTTCCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RYVFLLSLLTNPVTS*SLEICKMAGNPSRA Trigger: TGCTCTGGAAGGGTTTCCTGCCATCTTACAGATCTCTAAGCTCAAAGAAGTCACTGGATTCGTCAAAAGACTCAGGAGAAAGACGTACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CAA 90 bp | ATTCTCCTGCTGTTCTTCAGGACCATTTTCATCGTCTTCGCCATGTaGGAAAGGTACGTCTTTCTCCTGAGTCTTTTGACGAATCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ILLLFFRTIFIVFAM*ERYVFLLSLLTNPV Trigger: CACTGGATTCGTCAAAAGACTCAGGAGAAAGACGTACCTTTCCAACATGGCGAAGACGATGAAAATGGTCCTGAAGAACAGCAGGAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
||
| CDS CCA 72 bp | AAAGAAATTAAACAGCCTAAGCATTTCATCTCTGTGTaGCTCTCTGGCTCCTCTTCATGGTCGGAGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: KEIKQPKHFISV*LSGSSSWSESP Trigger: AGGTGACTCCGACCATGAAGAGGAGCCAGAGAGCCACACAGAGATGAAATGCTTAGGCTGTTTAATTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS CCA 72 bp | GCGAGCTTGATAAAATCCTCTTTGTTTTTGCTCGGCTaGAAGACAAGCACTTGGAGGTTTGAAGACACACAG | + |
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Preference number: 6 (lower is better) Translates to: ASLIKSSLFLLG*KTSTWRFEDTQ Trigger: CTGTGTGTCTTCAAACCTCCAAGTGCTTGTCTTCCAGCCGAGCAAAAACAAAGAGGATTTTATCAAGCTCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS CAA 72 bp | ATGGAGACACAGGTGAGCCCATCGGGTCCTTCTTTATaGGTGAATGATTTTCACATGTTTCTTCCTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: METQVSPSGPSL*VNDFHMFLPAG Trigger: TCCAGCAGGAAGAAACATGTGAAAATCATTCACCAATAAAGAAGGACCCGATGGGCTCACCTGTGTCTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS CAA 72 bp | CTGTTCTTCAGGACCATTTTCATCGTCTTCGCCATGTaGGAAAGGTACGTCTTTCTCCTGAGTCTTTTGACG | + |
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Preference number: 6 (lower is better) Translates to: LFFRTIFIVFAM*ERYVFLLSLLT Trigger: CGTCAAAAGACTCAGGAGAAAGACGTACCTTTCCAACATGGCGAAGACGATGAAAATGGTCCTGAAGAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS CAA 72 bp | AAGCTGGCAGCGAGCTTGATAAAATCCTCTTTGTTTTaGCTCGGCTGGAAGACAAGCACTTGGAGGTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: KLAASLIKSSLF*LGWKTSTWRFE Trigger: TTCAAACCTCCAAGTGCTTGTCTTCCAGCCGAGCAAAAACAAAGAGGATTTTATCAAGCTCGCTGCCAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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| CDS CCA 72 bp | TACGTGTTTTCTGAGCTTTGGGGCACATCTGATATGTaGATCACAAACCTCTGTCCATTGCTTAGGGTTATG | + |
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Preference number: 6 (lower is better) Translates to: YVFSELWGTSDM*ITNLCPLLRVM Trigger: CATAACCCTAAGCAATGGACAGAGGTTTGTGATCCACATATCAGATGTGCCCCAAAGCTCAGAAAACACGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151913.3 |
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