Pregenerated sensors for RFX6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019900Ensembl transcript IDs: ENSMUST00000050455.5, ENSMUST00000122922.10, ENSMUST00000219364.2, ENSMUST00000219771.2
Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTTATCAGTGTCCTCAGTTGAGAATGGGTGCAGAGCAGGGGGTATaGCTCCAGGCTGGCTGGAAGGCAGAGGGACATAGGATGTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: CYQCPQLRMGAEQGV*LQAGWKAEGHRMSP Trigger: TGGAGACATCCTATGTCCCTCTGCCTTCCAGCCAGCCTGGAGCCATACCCCCTGCTCTGCACCCATTCTCAACTGAGGACACTGATAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR CCA 90 bp | GAGAGAACTGTGCCCACGCTCGGGGGTCTGCTCGCCATTGGCCCTTaGTTAATAACACTTCCTCTGCTTGCTATGGCTGGAGAAATCGGT | + |
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Preference number: 1 (lower is better) Translates to: ERTVPTLGGLLAIGP*LITLPLLAMAGEIG Trigger: ACCGATTTCTCCAGCCATAGCAAGCAGAGGAAGTGTTATTAACCAAGGGCCAATGGCGAGCAGACCCCCGAGCGTGGGCACAGTTCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR TCA 90 bp | GGATGTCTCCACGTGGCTTTCGTTCTTCACAGTGTCACTGGCAAGTaGGCTAGCCTTATTTCGGTTGGCCAGAAAGCAAGAGCTCGGGGA | + |
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Preference number: 1 (lower is better) Translates to: GCLHVAFVLHSVTGK*ASLISVGQKARARG Trigger: TCCCCGAGCTCTTGCTTTCTGGCCAACCGAAATAAGGCTAGCTCACTTGCCAGTGACACTGTGAAGAACGAAAGCCACGTGGAGACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR GCA 90 bp | GGGTCTGCTCGCCATTGGCCCTTGGTTAATAACACTTCCTCTGCTTaGTATGGCTGGAGAAATCGGTGGTGTCATCAGATGGCCAGTACT | + |
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Preference number: 1 (lower is better) Translates to: GSARHWPLVNNTSSA*YGWRNRWCHQMAST Trigger: AGTACTGGCCATCTGATGACACCACCGATTTCTCCAGCCATAGCAAGCAGAGGAAGTGTTATTAACCAAGGGCCAATGGCGAGCAGACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR CCA 90 bp | CCTGCATGCTGTGTGACTCTTGTGTGTGTGTGGATGGTCCATAACTaGAAGGTGGCCTACAATTATATGGAGACCCAGCACAACTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: PACCVTLVCVWMVHN*KVAYNYMETQHNCH Trigger: GTGGCAGTTGTGCTGGGTCTCCATATAATTGTAGGCCACCTTCCAGTTATGGACCATCCACACACACACAAGAGTCACACAGCATGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR TCA 90 bp | ATCGGTGGTGTCATCAGATGGCCAGTACTTTGTGAAAGCTCTATTTaGCCTGGGAGTGGCATGTTATCAGTGTCCTCAGTTGAGAATGGG | + |
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Preference number: 1 (lower is better) Translates to: IGGVIRWPVLCESSI*PGSGMLSVSSVENG Trigger: CCCATTCTCAACTGAGGACACTGATAACATGCCACTCCCAGGTCAAATAGAGCTTTCACAAAGTACTGGCCATCTGATGACACCACCGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR TCA 90 bp | TATGGCTGGAGAAATCGGTGGTGTCATCAGATGGCCAGTACTTTGTaGAAGCTCTATTTGACCTGGGAGTGGCATGTTATCAGTGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: YGWRNRWCHQMASTL*KLYLTWEWHVISVL Trigger: GAGGACACTGATAACATGCCACTCCCAGGTCAAATAGAGCTTTCACAAAGTACTGGCCATCTGATGACACCACCGATTTCTCCAGCCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR CCA 90 bp | TGTGTGTGTGGATGGTCCATAACTGGAAGGTGGCCTACAATTATATaGAGACCCAGCACAACTGCCACCAAAGAAGTCTCTAGAAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: CVCGWSITGRWPTII*RPSTTATKEVSRKL Trigger: CAGCTTTCTAGAGACTTCTTTGGTGGCAGTTGTGCTGGGTCTCCATATAATTGTAGGCCACCTTCCAGTTATGGACCATCCACACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR TCA 90 bp | ACTAAGGAAATTGAAGCTTCCTGTGTTCAAAACCTGCATGCTGTGTaGCTCTTGTGTGTGTGTGGATGGTCCATAACTGGAAGGTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: TKEIEASCVQNLHAV*LLCVCGWSITGRWP Trigger: AGGCCACCTTCCAGTTATGGACCATCCACACACACACAAGAGTCACACAGCATGCAGGTTTTGAACACAGGAAGCTTCAATTTCCTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR CCA 90 bp | TGCTTGCTGCATTGGAGTCCAGACTATCTTGCACTGGATACTGATTaGAAGTTCCATACATACACTGGGATGAAGATGAAGGAATCTGGG | + |
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Preference number: 1 (lower is better) Translates to: CLLHWSPDYLALDTD*KFHTYTGMKMKESG Trigger: CCCAGATTCCTTCATCTTCATCCCAGTGTATGTATGGAACTTCCAATCAGTATCCAGTGCAAGATAGTCTGGACTCCAATGCAGCAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR TCA 90 bp | CTGTTGCTTGCTGCATTGGAGTCCAGACTATCTTGCACTGGATACTaGTTGGAAGTTCCATACATACACTGGGATGAAGATGAAGGAATC | + |
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Preference number: 1 (lower is better) Translates to: LLLAALESRLSCTGY*LEVPYIHWDEDEGI Trigger: GATTCCTTCATCTTCATCCCAGTGTATGTATGGAACTTCCAATCAGTATCCAGTGCAAGATAGTCTGGACTCCAATGCAGCAAGCAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR GCA 90 bp | AGGAATCTGGGTTTGCAAGTTGGAAGCTACTACAGTAGTACGACATaGAACAGGAGACAATGTGTCTGCATAAAACGAGTTGTTCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: RNLGLQVGSYYSSTT*NRRQCVCIKRVVLL Trigger: AAGCAGAACAACTCGTTTTATGCAGACACATTGTCTCCTGTTGCATGTCGTACTACTGTAGTAGCTTCCAACTTGCAAACCCAGATTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR TCA 90 bp | TATATTGTTTCCATAGTATCCATTGGGAGAATTAGAAGGCAATGTTaGCCCTTGGCAGCTGCCAGCTCCTGCATTACTAAGGAAATTGAA | + |
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Preference number: 1 (lower is better) Translates to: YIVSIVSIGRIRRQC*PLAAASSCITKEIE Trigger: TTCAATTTCCTTAGTAATGCAGGAGCTGGCAGCTGCCAAGGGTCAACATTGCCTTCTAATTCTCCCAATGGATACTATGGAAACAATATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR CCA 90 bp | CTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATaGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTC | + |
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Preference number: 1 (lower is better) Translates to: LFVCSTSISIHYGVV*HSSDLKITFSHCTF Trigger: GAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
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| 3UTR-3UTR CCA 90 bp | AGGCCATGCACCGCCCATGCTCTGCACGGTGAGCATAGAGGCTTGATGCAGGGTTGGCTCCAGGCTGGCTaGAAGGCAGAGGGACATAGG | + |
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Preference number: 2 (lower is better) Translates to: RPCTAHALHGEHRGLMQGWLQAG*KAEGHR Trigger: CCTATGTCCCTCTGCCTTCCAGCCAGCCTGGAGCCA...ACCCTGCATCAAGCCTCTATGCTCACCGTGCAGAGCATGGGCGGTGCATGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGGCAGAGGGACATAGGATGTCTCCACGTGGCTTTCGTTCTTCACAGTGTAGCTCGGGGAAGCTGTaGAGGCAGCTTTACTCGCAT | + |
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Preference number: 2 (lower is better) Translates to: WKAEGHRMSPRGFRSSQCSSGKL*RQLYSH Trigger: ATGCGAGTAAAGCTGCCTTCACAGCTTCCCCGAGCT...ACACTGTGAAGAACGAAAGCCACGTGGAGACATCCTATGTCCCTCTGCCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGGAGCGCACACTGCTGATGACTGAAACATGTTGGTTCACCATCGATCCATCAGTTGAGAATGGGTaGAGAGCAGGGGGTATGGCT | + |
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Preference number: 2 (lower is better) Translates to: GRERTLLMTETCWFTIDPSVENG*RAGGMA Trigger: AGCCATACCCCCTGCTCTGCACCCATTCTCAACTGA...TGGATCGATGGTGAACCAACATGTTTCAGTCATCAGCAGTGTGCGCTCCCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACTGTGCCCACGCTCGGGGGTCTGCTCGCCATTGGCCCTTGGTTAATAACAGGTGGTGTCATCAGATaGCCAGTACTTTGTGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: RTVPTLGGLLAIGPWLITGGVIR*PVLCES Trigger: GCTTTCACAAAGTACTGGCCATCTGATGACACCACC...TGTTATTAACCAAGGGCCAATGGCGAGCAGACCCCCGAGCGTGGGCACAGTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR-3UTR GCA 90 bp | CCATTGGGAGAATTAGAAGGCAATGTTGACCCTTGGCAGCTGCCAGCTCCTGCACCTGTGTTCAAAACCTaGATGCTGTGTGACTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: PLGELEGNVDPWQLPAPAPVFKT*MLCDSC Trigger: ACAAGAGTCACACAGCATGCAGGTTTTGAACACAGG...TGCAGGAGCTGGCAGCTGCCAAGGGTCAACATTGCCTTCTAATTCTCCCAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGAAGGCAATGTTGACCCTTGGCAGCTGCCAGCTCCTGCATTACTAAGGAAAGGCTGGAGAAATCGGTaGTGTCATCAGATGGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: LEGNVDPWQLPAPALLRKGWRNR*CHQMAS Trigger: ACTGGCCATCTGATGACACCACCGATTTCTCCAGCC...TTTCCTTAGTAATGCAGGAGCTGGCAGCTGCCAAGGGTCAACATTGCCTTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGAATTAGAAGGCAATGTTGACCCTTGGCAGCTGCCAGCTCCTGCATTACTAAAGTCTCTAGAAAGCTaGTGTTCAGTCCAGGCCATG | + |
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Preference number: 2 (lower is better) Translates to: GELEGNVDPWQLPAPALLKSLES*CSVQAM Trigger: CATGGCCTGGACTGAACAGCAGCTTTCTAGAGACTT...TAGTAATGCAGGAGCTGGCAGCTGCCAAGGGTCAACATTGCCTTCTAATTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGATGAAGGAATCTGGGTTTGCAAGTTGGAAGCTACTACAGTAGTACGACATGCAATGTGTTGGAGCTaGGAGAACTGTGCCCACGCT | + |
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Preference number: 2 (lower is better) Translates to: EDEGIWVCKLEATTVVRHAMCWS*ENCAHA Trigger: AGCGTGGGCACAGTTCTCTCAGCTCCAACACATTGC...ATGTCGTACTACTGTAGTAGCTTCCAACTTGCAAACCCAGATTCCTTCATCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGGAGTCCAGACTATCTTGCACTGGATACTGATTGGAAGTTCCATACATACAGGCAATGTTGACCCTTaGCAGCTGCCAGCTCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: IGVQTILHWILIGSSIHTGNVDP*QLPAPA Trigger: TGCAGGAGCTGGCAGCTGCCAAGGGTCAACATTGCC...TGTATGTATGGAACTTCCAATCAGTATCCAGTGCAAGATAGTCTGGACTCCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR CAA 90 bp | AATGTTGACCCTTGGCAGCTGCCAGCTCCTGCATTACTAAGGAAATaGAAGCTTCCTGTGTTCAAAACCTGCATGCTGTGTGACTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: NVDPWQLPAPALLRK*KLPVFKTCMLCDSC Trigger: ACAAGAGTCACACAGCATGCAGGTTTTGAACACAGGAAGCTTCAATTTCCTTAGTAATGCAGGAGCTGGCAGCTGCCAAGGGTCAACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGGTGGTAAAGAGGACACCATTTCTCTGTTGCTTGCTGCATTGGAGTCCAGAACTCTTGTGTGTGTGTaGATGGTCCATAACTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: MGGKEDTISLLLAALESRTLVCV*MVHNWK Trigger: CTTCCAGTTATGGACCATCCACACACACACAAGAGT...TCTGGACTCCAATGCAGCAAGCAACAGAGAAATGGTGTCCTCTTTACCACCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGATGACTGAAACATGTTGGTTCACCATCGATCCAAGCCTATGTGCCTCTTTGTCATTGTTAAATTaGGTCTCCATGGCCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LLMTETCWFTIDPSLCASLSLLN*VSMARR Trigger: TCTCCTGGCCATGGAGACTCAATTTAACAATGACAA...AGAGGCACATAGGCTTGGATCGATGGTGAACCAACATGTTTCAGTCATCAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCATTGGAGTCCAGACTATCTTGCACTGGATACTGATTGGAAGTTCCATACATGGCCTACAATTATATaGAGACCCAGCACAACTGCC | + |
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Preference number: 2 (lower is better) Translates to: LHWSPDYLALDTDWKFHTWPTII*RPSTTA Trigger: GGCAGTTGTGCTGGGTCTCCATATAATTGTAGGCCA...TGTATGGAACTTCCAATCAGTATCCAGTGCAAGATAGTCTGGACTCCAATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR-3UTR CCA 90 bp | GGCATCAAGGCAGCAGAGCGTTTGAGTTTCACCTGCATTCTACATTGTTCATTTTATTTGACCTGGGAGTaGCATGTTATCAGTGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: GIKAAERLSFTCILHCSFYLTWE*HVISVL Trigger: GAGGACACTGATAACATGCCACTCCCAGGTCAAATA...AAATGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCTTCTCTCGTGGCAGCTaGAGGTGGATAATGGCATCA | + |
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Preference number: 2 (lower is better) Translates to: SIHYGVVWHSSDLKITFSFSRGS*RWIMAS Trigger: TGATGCCATTATCCACCTCCAGCTGCCACGAGAGAA...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
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| 3UTR-3UTR CCA 90 bp | ATCTCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCCCCTCTCTTCTCTCGTaGCAGCTGGAGGTGGATAAT | + |
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Preference number: 2 (lower is better) Translates to: ISIHYGVVWHSSDLKITFPSLLS*QLEVDN Trigger: ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGG...GAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
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| 3UTR-3UTR CCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTTCTCTCGTGGCAGCTaGAGGTGGATAATGGCATCA | + |
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Preference number: 2 (lower is better) Translates to: IHYGVVWHSSDLKITFSHFSRGS*RWIMAS Trigger: TGATGCCATTATCCACCTCCAGCTGCCACGAGAGAA...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
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| 3UTR-3UTR CCA 90 bp | CTGCATTGGAGTCCAGACTATCTTGCACTGGATACTGATTGGAAGTTCCATACATCCATAACTGGAAGGTaGCCTACAATTATATGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LHWSPDYLALDTDWKFHTSITGR*PTIIWR Trigger: TCTCCATATAATTGTAGGCCACCTTCCAGTTATGGA...TGTATGGAACTTCCAATCAGTATCCAGTGCAAGATAGTCTGGACTCCAATGCAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR CCA 72 bp | TGTCCTCAGTTGAGAATGGGTGCAGAGCAGGGGGTATaGCTCCAGGCTGGCTGGAAGGCAGAGGGACATAGG | + |
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Preference number: 3 (lower is better) Translates to: CPQLRMGAEQGV*LQAGWKAEGHR Trigger: CCTATGTCCCTCTGCCTTCCAGCCAGCCTGGAGCCATACCCCCTGCTCTGCACCCATTCTCAACTGAGGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR GCA 72 bp | CATATGTTGAGCAATGTGTTGGAGCTGAGAGAACTGTaGCCACGCTCGGGGGTCTGCTCGCCATTGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: HMLSNVLELREL*PRSGVCSPLAL Trigger: AAGGGCCAATGGCGAGCAGACCCCCGAGCGTGGGCACAGTTCTCTCAGCTCCAACACATTGCTCAACATATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCAGGGGGTATGGCTCCAGGCTGGCTGGAAGGCAGAGGGACATAGGATGTCTAAGGCAGCAGAGCGTTaGAGTTTCACCTGCATTCTA | + |
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Preference number: 3 (lower is better) Translates to: EQGVWLQAGWKAEGHRMSKAAER*SFTCIL Trigger: TAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTT...AGACATCCTATGTCCCTCTGCCTTCCAGCCAGCCTGGAGCCATACCCCCTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR TCA 72 bp | TTGACCTGGGAGTGGCATGTTATCAGTGTCCTCAGTTaGGAATGGGTGCAGAGCAGGGGGTATGGCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: LTWEWHVISVLS*EWVQSRGYGSR Trigger: CCTGGAGCCATACCCCCTGCTCTGCACCCATTCTCAACTGAGGACACTGATAACATGCCACTCCCAGGTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR TCA 72 bp | GCACCGCCCATGCTCTGCACGGTGAGCATAGAGGCTTaGTGCAGGGTGAGACTGTGTCCTAAACATAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: APPMLCTVSIEA*CRVRLCPKHSL Trigger: CAGACTATGTTTAGGACACAGTCTCACCCTGCATCAAGCCTCTATGCTCACCGTGCAGAGCATGGGCGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR GCA 72 bp | CCAGCACAACTGCCACCAAAGAAGTCTCTAGAAAGCTaGTGTTCAGTCCAGGCCATGCACCGCCCATGCTCT | + |
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Preference number: 3 (lower is better) Translates to: PAQLPPKKSLES*CSVQAMHRPCS Trigger: AGAGCATGGGCGGTGCATGGCCTGGACTGAACAGCAGCTTTCTAGAGACTTCTTTGGTGGCAGTTGTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR CCA 72 bp | GAGAACTGTGCCCACGCTCGGGGGTCTGCTCGCCATTaGCCCTTGGTTAATAACACTTCCTCTGCTTGCTAT | + |
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Preference number: 3 (lower is better) Translates to: ENCAHARGSARH*PLVNNTSSACY Trigger: ATAGCAAGCAGAGGAAGTGTTATTAACCAAGGGCCAATGGCGAGCAGACCCCCGAGCGTGGGCACAGTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR CCA 72 bp | GGCAGGGAGCGCACACTGCTGATGACTGAAACATGTTaGTTCACCATCGATCCAAGCCTATGTGCCTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: GRERTLLMTETC*FTIDPSLCASE Trigger: CTCAGAGGCACATAGGCTTGGATCGATGGTGAACCAACATGTTTCAGTCATCAGCAGTGTGCGCTCCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATAAGGCAGCAGAGCGTTaGAGTTTCACCTGCATTCTA | + |
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Preference number: 3 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNKAAER*SFTCIL Trigger: TAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTT...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
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| 3UTR-3UTR CAA 90 bp | TTGATGGGTGGTAAAGAGGACACCATTTCTCTGTTGCTTGCTGCATTGGAGTCCGGTGAGCATAGAGGCTaGATGCAGGGTGAGACTGTG | + |
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Preference number: 3 (lower is better) Translates to: LMGGKEDTISLLLAALESGEHRG*MQGETV Trigger: CACAGTCTCACCCTGCATCAAGCCTCTATGCTCACC...GGACTCCAATGCAGCAAGCAACAGAGAAATGGTGTCCTCTTTACCACCCATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR TCA 72 bp | TTCGGTTGGCCAGAAAGCAAGAGCTCGGGGAAGCTGTaGAGGCAGCTTTACTCGCATCCGAGTTCTTCATAT | + |
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Preference number: 3 (lower is better) Translates to: FGWPESKSSGKL*RQLYSHPSSSY Trigger: ATATGAAGAACTCGGATGCGAGTAAAGCTGCCTTCACAGCTTCCCCGAGCTCTTGCTTTCTGGCCAACCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR TCA 72 bp | CACGTGGCTTTCGTTCTTCACAGTGTCACTGGCAAGTaGGCTAGCCTTATTTCGGTTGGCCAGAAAGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: HVAFVLHSVTGK*ASLISVGQKAR Trigger: TCTTGCTTTCTGGCCAACCGAAATAAGGCTAGCTCACTTGCCAGTGACACTGTGAAGAACGAAAGCCACGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR GCA 72 bp | TGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTaGACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: WHSSDLKITFSH*TFHPLFSRGSW Trigger: CCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
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| 3UTR GCA 72 bp | CGCCATTGGCCCTTGGTTAATAACACTTCCTCTGCTTaGTATGGCTGGAGAAATCGGTGGTGTCATCAGATG | + |
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Preference number: 3 (lower is better) Translates to: RHWPLVNNTSSA*YGWRNRWCHQM Trigger: CATCTGATGACACCACCGATTTCTCCAGCCATAGCAAGCAGAGGAAGTGTTATTAACCAAGGGCCAATGGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
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| 3UTR CCA 72 bp | CTCTTGTGTGTGTGTGGATGGTCCATAACTGGAAGGTaGCCTACAATTATATGGAGACCCAGCACAACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLCVCGWSITGR*PTIIWRPSTTA Trigger: GGCAGTTGTGCTGGGTCTCCATATAATTGTAGGCCACCTTCCAGTTATGGACCATCCACACACACACAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR CCA 72 bp | CCCTTGGTTAATAACACTTCCTCTGCTTGCTATGGCTaGAGAAATCGGTGGTGTCATCAGATGGCCAGTACT | + |
|
Preference number: 3 (lower is better) Translates to: PLVNNTSSACYG*RNRWCHQMAST Trigger: AGTACTGGCCATCTGATGACACCACCGATTTCTCCAGCCATAGCAAGCAGAGGAAGTGTTATTAACCAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR CCA 72 bp | GGATGGTCCATAACTGGAAGGTGGCCTACAATTATATaGAGACCCAGCACAACTGCCACCAAAGAAGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GWSITGRWPTII*RPSTTATKEVS Trigger: AGAGACTTCTTTGGTGGCAGTTGTGCTGGGTCTCCATATAATTGTAGGCCACCTTCCAGTTATGGACCATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR CCA 72 bp | TGTGTGACTCTTGTGTGTGTGTGGATGGTCCATAACTaGAAGGTGGCCTACAATTATATGGAGACCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: CVTLVCVWMVHN*KVAYNYMETQH Trigger: GTGCTGGGTCTCCATATAATTGTAGGCCACCTTCCAGTTATGGACCATCCACACACACACAAGAGTCACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR TCA 72 bp | GTCATCAGATGGCCAGTACTTTGTGAAAGCTCTATTTaGCCTGGGAGTGGCATGTTATCAGTGTCCTCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: VIRWPVLCESSI*PGSGMLSVSSV Trigger: AACTGAGGACACTGATAACATGCCACTCCCAGGTCAAATAGAGCTTTCACAAAGTACTGGCCATCTGATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR TCA 72 bp | ATTGAAGCTTCCTGTGTTCAAAACCTGCATGCTGTGTaGCTCTTGTGTGTGTGTGGATGGTCCATAACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: IEASCVQNLHAV*LLCVCGWSITG Trigger: TCCAGTTATGGACCATCCACACACACACAAGAGTCACACAGCATGCAGGTTTTGAACACAGGAAGCTTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR CCA 72 bp | TCAAAACCTGCATGCTGTGTGACTCTTGTGTGTGTGTaGATGGTCCATAACTGGAAGGTGGCCTACAATTAT | + |
|
Preference number: 3 (lower is better) Translates to: SKPACCVTLVCV*MVHNWKVAYNY Trigger: ATAATTGTAGGCCACCTTCCAGTTATGGACCATCCACACACACACAAGAGTCACACAGCATGCAGGTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR CCA 72 bp | TATCCATTGGGAGAATTAGAAGGCAATGTTGACCCTTaGCAGCTGCCAGCTCCTGCATTACTAAGGAAATTG | + |
|
Preference number: 3 (lower is better) Translates to: YPLGELEGNVDP*QLPAPALLRKL Trigger: CAATTTCCTTAGTAATGCAGGAGCTGGCAGCTGCCAAGGGTCAACATTGCCTTCTAATTCTCCCAATGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR CCA 72 bp | GTTGCTTGCTGCATTGGAGTCCAGACTATCTTGCACTaGATACTGATTGGAAGTTCCATACATACACTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VACCIGVQTILH*ILIGSSIHTLG Trigger: TCCCAGTGTATGTATGGAACTTCCAATCAGTATCCAGTGCAAGATAGTCTGGACTCCAATGCAGCAAGCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR CCA 72 bp | GTAAAGAGGACACCATTTCTCTGTTGCTTGCTGCATTaGAGTCCAGACTATCTTGCACTGGATACTGATTGG | + |
|
Preference number: 3 (lower is better) Translates to: VKRTPFLCCLLH*SPDYLALDTDW Trigger: CCAATCAGTATCCAGTGCAAGATAGTCTGGACTCCAATGCAGCAAGCAACAGAGAAATGGTGTCCTCTTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGATGAAGGAATCTGGGTTTGCAAGTTGGAAGCTACTACAGTAGTACGACATATGTTGAGCAATGTGTaGGAGCTGAGAGAACTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: EDEGIWVCKLEATTVVRHMLSNV*ELRELC Trigger: GCACAGTTCTCTCAGCTCCAACACATTGCTCAACAT...ATGTCGTACTACTGTAGTAGCTTCCAACTTGCAAACCCAGATTCCTTCATCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR TCA 72 bp | GCTGCATTGGAGTCCAGACTATCTTGCACTGGATACTaGTTGGAAGTTCCATACATACACTGGGATGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: AALESRLSCTGY*LEVPYIHWDED Trigger: ATCTTCATCCCAGTGTATGTATGGAACTTCCAATCAGTATCCAGTGCAAGATAGTCTGGACTCCAATGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR GCA 72 bp | AATGGCATCAAGGCAGCAGAGCGTTTGAGTTTCACCTaGATTCTACATTGTTCATTTAAGTGTCTCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: NGIKAAERLSFT*ILHCSFKCLQL Trigger: CAGCTGGAGACACTTAAATGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATAAAGGCAGCAGAGCGTTaGAGTTTCACCTGCATTCTA | + |
|
Preference number: 3 (lower is better) Translates to: AYLCAVQVSPFTMELYGIKAAER*SFTCIL Trigger: TAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTT...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| 3UTR GCA 72 bp | GGTTTGCAAGTTGGAAGCTACTACAGTAGTACGACATaGAACAGGAGACAATGTGTCTGCATAAAACGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GLQVGSYYSSTT*NRRQCVCIKRV Trigger: AACTCGTTTTATGCAGACACATTGTCTCCTGTTGCATGTCGTACTACTGTAGTAGCTTCCAACTTGCAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR GCA 72 bp | TACATACACTGGGATGAAGATGAAGGAATCTGGGTTTaGAAGTTGGAAGCTACTACAGTAGTACGACATGCA | + |
|
Preference number: 3 (lower is better) Translates to: YIHWDEDEGIWV*KLEATTVVRHA Trigger: TGCATGTCGTACTACTGTAGTAGCTTCCAACTTGCAAACCCAGATTCCTTCATCTTCATCCCAGTGTATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR CCA 72 bp | ATAGTTAGAGTTGGTCCCATAAAAGTCGTGGTTGGCTaGAGAGAGCGTAGGATAAATTGGTTCTGCATATGT | + |
|
Preference number: 3 (lower is better) Translates to: IVRVGPIKVVVG*RERRINWFCIC Trigger: ACATATGCAGAACCAATTTATCCTACGCTCTCTCCAGCCAACCACGACTTTTATGGGACCAACTCTAACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR CCA 72 bp | CATTGGAGTCCAGACTATCTTGCACTGGATACTGATTaGAAGTTCCATACATACACTGGGATGAAGATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HWSPDYLALDTD*KFHTYTGMKMK Trigger: CTTCATCTTCATCCCAGTGTATGTATGGAACTTCCAATCAGTATCCAGTGCAAGATAGTCTGGACTCCAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR TCA 72 bp | ATGTTGGTTCACCATCGATCCAAGCCTATGTGCCTCTaGGTAGTTTATATTGTTTCCATAGTATCCATTGGG | + |
|
Preference number: 3 (lower is better) Translates to: MLVHHRSKPMCL*VVYIVSIVSIG Trigger: CCCAATGGATACTATGGAAACAATATAAACTACTCAGAGGCACATAGGCTTGGATCGATGGTGAACCAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| 3UTR CCA 72 bp | TGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATaGCATAGCAGTGATCTGAAAATAACATTCAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: CSTSISIHYGVV*HSSDLKITFSH Trigger: ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATAGCTCGGGGAAGCTGTaGAGGCAGCTTTACTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNSSGKL*RQLYSH Trigger: ATGCGAGTAAAGCTGCCTTCACAGCTTCCCCGAGCT...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATGCAATGTGTTGGAGCTaGGAGAACTGTGCCCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNAMCWS*ENCAHA Trigger: AGCGTGGGCACAGTTCTCTCAGCTCCAACACATTGC...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGCTGGCTGGAAGGCAGAGGGACATAGGATGTCTCCACGTGGCTTTCGTCTGGTCAAAGAGAGCTaGTCTGGCAATCTGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQAGWKAEGHRMSPRGFRLVKES*SGNLSK Trigger: CTTGCTCAGATTGCCAGACCAGCTCTCTTTGACCAG...ACGAAAGCCACGTGGAGACATCCTATGTCCCTCTGCCTTCCAGCCAGCCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATATTAGAAGGCAATGTTaGCCCTTGGCAGCTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNIRRQC*PLAAAS Trigger: GCTGGCAGCTGCCAAGGGTCAACATTGCCTTCTAAT...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATGGCTGGAGAAATCGGTaGTGTCATCAGATGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNGWRNR*CHQMAS Trigger: ACTGGCCATCTGATGACACCACCGATTTCTCCAGCC...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATGGTGGCTGCACAAGCTaGCTCCAGTTTCTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNGGCTS*LQFLFP Trigger: AGGAAAGAGAAACTGGAGCCAGCTTGTGCAGCCACC...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| 3UTR CAA 72 bp | TTTGACCTGGGAGTGGCATGTTATCAGTGTCCTCAGTaGAGAATGGGTGCAGAGCAGGGGGTATGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FDLGVACYQCPQ*RMGAEQGVWLQ Trigger: CTGGAGCCATACCCCCTGCTCTGCACCCATTCTCAACTGAGGACACTGATAACATGCCACTCCCAGGTCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATGCATTCACCACATGCTaGTCAAAGAGAGCTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNAFTTC*SKRAGL Trigger: CAGACCAGCTCTCTTTGACCAGCATGTGGTGAATGC...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | GTGCCCACGCTCGGGGGTCTGCTCGCCATTGGCCCTTGGTTAATAACACTTCCTCAAGATGTTGAGCGCTaGGAAATTCTGGAAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VPTLGGLLAIGPWLITLPQDVER*EILEEV Trigger: CACTTCTTCCAGAATTTCCCAGCGCTCAACATCTTG...AGGAAGTGTTATTAACCAAGGGCCAATGGCGAGCAGACCCCCGAGCGTGGGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATATGGCATTCACCACATaGTGGTCAAAGAGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNMAFTT*WSKRAG Trigger: ACCAGCTCTCTTTGACCAGCATGTGGTGAATGCCAT...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATTGTTGCTTGCTGCATTaGAGTCCAGACTATCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNCCLLH*SPDYLA Trigger: TGCAAGATAGTCTGGACTCCAATGCAGCAAGCAACA...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATATAAAGAATGCACCGTaGGAGGCAAACTCCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNIKNAP*EANSFT Trigger: TGTGAAGGAGTTTGCCTCCCACGGTGCATTCTTTAT...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATAAGACCAGCAAGCCCTTaGCAAGCAGCTGCGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AYLCAVQVSPFTMELYGIRPASP*QAAARS Trigger: GCTGCGCGCAGCTGCTTGGCAAGGGCTTGCTGGTCT...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | AATGGCATCAAGGCAGCAGAGCGTTTGAGTTTCACCTGCATTCTACATTGTTCACGGCTGCTTTGGTCTTaGTCTCCTGGGTGTCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NGIKAAERLSFTCILHCSRLLWS*SPGCPH Trigger: ATGCGGACACCCAGGAGAGCAAGACCAAAGCAGCCG...TGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | GCATGTTATCAGTGTCCTCAGTTGAGAATGGGTGCAGAGCAGGGGGTATGGCTCGCCTTAATAACTCTCTaGTCTACCACAGTGTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ACYQCPQLRMGAEQGVWLALITL*STTVSN Trigger: GTTGGACACTGTGGTAGAGCAGAGAGTTATTAAGGC...GAGCCATACCCCCTGCTCTGCACCCATTCTCAACTGAGGACACTGATAACATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAATTAGAAGGCAATGTTGACCCTTGGCAGCTGCCAGCTCCTGCATTACTAGCATTCACCACATGCTaGTCAAAGAGAGCTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GELEGNVDPWQLPAPALLAFTTC*SKRAGL Trigger: CAGACCAGCTCTCTTTGACCAGCATGTGGTGAATGC...TAGTAATGCAGGAGCTGGCAGCTGCCAAGGGTCAACATTGCCTTCTAATTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATCAATATCAGATACCATaGCATTCACCACATGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNQYQIP*HSPHAG Trigger: ACCAGCATGTGGTGAATGCCATGGTATCTGATATTG...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TATGTTGAGCAATGTGTTGGAGCTGAGAGAACTGTGCCCACGCTCGGGGGTCTGCAATATCAGATACCATaGCATTCACCACATGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YVEQCVGAERTVPTLGGLQYQIP*HSPHAG Trigger: ACCAGCATGTGGTGAATGCCATGGTATCTGATATTG...CAGACCCCCGAGCGTGGGCACAGTTCTCTCAGCTCCAACACATTGCTCAACATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR CCA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACGGTATGGCTCCAGGCTaGCTGGAAGGCAGAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VVWHSSDLKITFSHCTFHGMAPG*LEGRGT Trigger: TGTCCCTCTGCCTTCCAGCCAGCCTGGAGCCATACC...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATAGTTCAGTCCAGGCCATaGACCGCCCATGCTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AYLCAVQVSPFTMELYGIVQSRP*TAHALH Trigger: GTGCAGAGCATGGGCGGTGCATGGCCTGGACTGAAC...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATAACAGAGTGGTAATATaGACTGCTTTCTTTGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNNRVVI*TAFFDA Trigger: GGCATCAAAGAAAGCAGTGCATATTACCACTCTGTT...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATAGGTATGGCTCCAGGCTaGCTGGAAGGCAGAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AYLCAVQVSPFTMELYGIGMAPG*LEGRGT Trigger: TGTCCCTCTGCCTTCCAGCCAGCCTGGAGCCATACC...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATTCCATAACTGGAAGGTaGCCTACAATTATATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNSITGR*PTIIWR Trigger: TCTCCATATAATTGTAGGCCACCTTCCAGTTATGGA...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | AATGGCATCAAGGCAGCAGAGCGTTTGAGTTTCACCTGCATTCTACATTGTTCAATTAGAAGGCAATGTTaGCCCTTGGCAGCTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NGIKAAERLSFTCILHCSIRRQC*PLAAAS Trigger: GCTGGCAGCTGCCAAGGGTCAACATTGCCTTCTAAT...TGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TGGAAGGCAGAGGGACATAGGATGTCTCCACGTGGCTTTCGTTCTTCACAGTGTAGCGCTGGGAAATTCTaGAAGAAGTGTTCCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WKAEGHRMSPRGFRSSQCSAGKF*KKCSCF Trigger: AAAACAGGAACACTTCTTCCAGAATTTCCCAGCGCT...ACACTGTGAAGAACGAAAGCCACGTGGAGACATCCTATGTCCCTCTGCCTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR TCA 90 bp | TTGATGGGTGGTAAAGAGGACACCATTTCTCTGTTGCTTGCTGCATTGGAGTCCCTTCAAAGTTCCCATTaGTGGCATTGTCGAGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: LMGGKEDTISLLLAALESLQSSH*WHCRVC Trigger: GCATACTCGACAATGCCATCAATGGGAACTTTGAAG...GGACTCCAATGCAGCAAGCAACAGAGAAATGGTGTCCTCTTTACCACCCATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR GCA 90 bp | ATAACACTTCCTCTGCTTGCTATGGCTGGAGAAATCGGTGGTGTCATCAGATGGTGGCATTGTCGAGTATaGACTGGCAGTGAGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ITLPLLAMAGEIGGVIRWWHCRV*TGSEFC Trigger: ACAAAACTCACTGCCAGTGCATACTCGACAATGCCA...CCATCTGATGACACCACCGATTTCTCCAGCCATAGCAAGCAGAGGAAGTGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAGGCAGAGGGACATAGGATGTCTCCACGTGGCTTTCGTTCTTCACAGTGTCATTTCTTGCATTGTTaGAGGAATGAGGACATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WKAEGHRMSPRGFRSSQCHFLHC*RNEDIC Trigger: ACAGATGTCCTCATTCCTGCAACAATGCAAGAAATG...ACACTGTGAAGAACGAAAGCCACGTGGAGACATCCTATGTCCCTCTGCCTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR CCA 90 bp | AATGGCATCAAGGCAGCAGAGCGTTTGAGTTTCACCTGCATTCTACATTGTTCACTGGTCAAAGAGAGCTaGTCTGGCAATCTGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NGIKAAERLSFTCILHCSLVKES*SGNLSK Trigger: CTTGCTCAGATTGCCAGACCAGCTCTCTTTGACCAG...TGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 ENSMUST00000219771.2 |
||
| CDS-3UTR CCA 90 bp | TCACATTTTAGCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTTGGCTCCAGGCTGGCTaGAAGGCAGAGGGACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHFSLFVCSTSISIHYGVWLQAG*KAEGHR Trigger: CCTATGTCCCTCTGCCTTCCAGCCAGCCTGGAGCCA...AACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGCTAAAATGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGGCTCCAGGCTGGCTaGAAGGCAGAGGGACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHWLQAG*KAEGHR Trigger: CCTATGTCCCTCTGCCTTCCAGCCAGCCTGGAGCCA...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACGGCTGGAGAAATCGGTaGTGTCATCAGATGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VVWHSSDLKITFSHCTFHGWRNR*CHQMAS Trigger: ACTGGCCATCTGATGACACCACCGATTTCTCCAGCC...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | AATGGCATCAAGGCAGCAGAGCGTTTGAGTTTCACCTGCATTCTACATTGTTCATTCCTCTGCTTGCTATaGCTGGAGAAATCGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NGIKAAERLSFTCILHCSFLCLL*LEKSVV Trigger: CACCACCGATTTCTCCAGCCATAGCAAGCAGAGGAA...TGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATATCTCGGAGGGAAGTTaGGGCGAAGGCTGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHISEGS*GEGCSC Trigger: GCAGGAGCAGCCTTCGCCCCAACTTCCCTCCGAGAT...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCGCAATGTGTTGGAGCTaGGAGAACTGTGCCCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: SIHYGVVWHSSDLKITFSAMCWS*ENCAHA Trigger: AGCGTGGGCACAGTTCTCTCAGCTCCAACACATTGC...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | AATGGCATCAAGGCAGCAGAGCGTTTGAGTTTCACCTGCATTCTACATTGTTCACCTTCATCATCTGCGTaGTGCTCTTCTTCTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NGIKAAERLSFTCILHCSPSSSA*CSSSER Trigger: TCTCTCAGAAGAAGAGCATCACGCAGATGATGAAGG...TGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | AATGGCATCAAGGCAGCAGAGCGTTTGAGTTTCACCTGCATTCTACATTGTTCATGGTACACAAGATGTTaGGCGCTGGGAAATTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NGIKAAERLSFTCILHCSWYTRC*ALGNSG Trigger: TCCAGAATTTCCCAGCGCTCAACATCTTGTGTACCA...TGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219771.2 |
||
| CDS-3UTR GCA 90 bp | GGCATCAAGGCAGCAGAGCGTTTGAGTTTCACCTGCATTCTACATTGTTCATTTATGGCATTCACCACATaGTGGTCAAAGAGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GIKAAERLSFTCILHCSFMAFTT*WSKRAG Trigger: ACCAGCTCTCTTTGACCAGCATGTGGTGAATGCCAT...AAATGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR GCA 90 bp | AATGGCATCAAGGCAGCAGAGCGTTTGAGTTTCACCTGCATTCTACATTGTTCAAACACTTCCTCTGCTTaGTATGGCTGGAGAAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: NGIKAAERLSFTCILHCSNTSSA*YGWRNR Trigger: CCGATTTCTCCAGCCATAGCAAGCAGAGGAAGTGTT...TGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTACATAGAATTGGAACACTACTATGTAACAGAAATCACCACACTAGTGGTTCAGTCCAGGCCATaGACCGCCCATGCTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSYIELEHYYVTEITTLVVQSRP*TAHALH Trigger: GTGCAGAGCATGGGCGGTGCATGGCCTGGACTGAAC...CACTAGTGTGGTGATTTCTGTTACATAGTAGTGTTCCAATTCTATGTAACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACCTTTCCAAAGGTGGCTaGACAAGCTGGCTCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVWHSSDLKITFSHCTFHLSKGG*TSWLQF Trigger: AAACTGGAGCCAGCTTGTGCAGCCACCTTTGGAAAG...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACGGGAAGGAGATGGTCTaGCATTCCTTGCCAAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VVWHSSDLKITFSHCTFHGKEMV*HSLPKV Trigger: CACTTTTGGCAAGGAATGCCAGACCATCTCCTTCCC...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | AATGGCATCAAGGCAGCAGAGCGTTTGAGTTTCACCTGCATTCTACATTGTTCATCTGCTTGCTATGGCTaGAGAAATCGGTGGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NGIKAAERLSFTCILHCSSACYG*RNRWCH Trigger: ATGACACCACCGATTTCTCCAGCCATAGCAAGCAGA...TGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | AATGGCATCAAGGCAGCAGAGCGTTTGAGTTTCACCTGCATTCTACATTGTTCATGGCCTACAATTATATaGAGACCCAGCACAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NGIKAAERLSFTCILHCSWPTII*RPSTTA Trigger: GGCAGTTGTGCTGGGTCTCCATATAATTGTAGGCCA...TGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATGGCAATGTTGACCCTTaGCAGCTGCCAGCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHGNVDP*QLPAPA Trigger: TGCAGGAGCTGGCAGCTGCCAAGGGTCAACATTGCC...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TCACATTTTAGCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGGCAATGTTGACCCTTaGCAGCTGCCAGCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHFSLFVCSTSISIHYGVGNVDP*QLPAPA Trigger: TGCAGGAGCTGGCAGCTGCCAAGGGTCAACATTGCC...AACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGCTAAAATGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | ATAACACTTCCTCTGCTTGCTATGGCTGGAGAAATCGGTGGTGTCATCAGATGGATGGTAAGAAGAGCCTaGGACCCAATACTATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ITLPLLAMAGEIGGVIRWMVRRA*DPILFK Trigger: CTTAAATAGTATTGGGTCTCAGGCTCTTCTTACCAT...CCATCTGATGACACCACCGATTTCTCCAGCCATAGCAAGCAGAGGAAGTGTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR TCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATAGCTCGGGGAAGCTGTaGAGGCAGCTTTACTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHSSGKL*RQLYSH Trigger: ATGCGAGTAAAGCTGCCTTCACAGCTTCCCCGAGCT...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATGTGATGCTCTTCTTCTaGGAGAGCTGTGGGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHVMLFF*ESCGSA Trigger: AGCCGACCCACAGCTCTCTCAGAAGAAGAGCATCAC...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACAAGTCTCTAGAAAGCTaGTGTTCAGTCCAGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VVWHSSDLKITFSHCTFHKSLES*CSVQAM Trigger: CATGGCCTGGACTGAACAGCAGCTTTCTAGAGACTT...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACCAAAGAGAGCTGGTCTaGCAATCTGAGCAAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: VVWHSSDLKITFSHCTFHQRELV*QSEQDA Trigger: TGCATCTTGCTCAGATTGCCAGACCAGCTCTCTTTG...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATAGCATTCACCACATGCTaGTCAAAGAGAGCTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AYLCAVQVSPFTMELYGIAFTTC*SKRAGL Trigger: CAGACCAGCTCTCTTTGACCAGCATGTGGTGAATGC...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| 3UTR CAA 72 bp | ACCACACTAGTGCACAGGGGTAGAAGGTCAAGTCACTaGGATCTAGCTACATACAATAAAGTCTTGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TTLVHRGRRSSH*DLATYNKVLTL Trigger: CAAGGTCAAGACTTTATTGTATGTAGCTAGATCCAAGTGACTTGACCTTCTACCCCTGTGCACTAGTGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| 3UTR CAA 72 bp | CTGGAGGTGGATAATGGCATCAAGGCAGCAGAGCGTTaGAGTTTCACCTGCATTCTACATTGTTCATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LEVDNGIKAAER*SFTCILHCSFK Trigger: CTTAAATGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCCATTATCCACCTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR GCA 90 bp | TCACATTTTAGCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTTCAGTTGAGAATGGGTaGAGAGCAGGGGGTATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHFSLFVCSTSISIHYGVSVENG*RAGGMA Trigger: AGCCATACCCCCTGCTCTGCACCCATTCTCAACTGA...AACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGCTAAAATGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTCAGTTGAGAATGGGTaGAGAGCAGGGGGTATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHSVENG*RAGGMA Trigger: AGCCATACCCCCTGCTCTGCACCCATTCTCAACTGA...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATAAACACTTCCTCTGCTTaGTATGGCTGGAGAAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: AYLCAVQVSPFTMELYGINTSSA*YGWRNR Trigger: CCGATTTCTCCAGCCATAGCAAGCAGAGGAAGTGTT...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TGCTTGCTATGGCTGGAGAAATCGGTGGTGTCATCAGATGGCCAGTACTTTGTGAGATCTTTCAGTTCTTaGAACACAGTAATAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLLWLEKSVVSSDGQYFVRSFSS*NTVIES Trigger: TGACTCTATTACTGTGTTCCAAGAACTGAAAGATCT...CACAAAGTACTGGCCATCTGATGACACCACCGATTTCTCCAGCCATAGCAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR CCA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATAGGTGGTGTCATCAGATaGCCAGTACTTTGTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AYLCAVQVSPFTMELYGIGGVIR*PVLCES Trigger: GCTTTCACAAAGTACTGGCCATCTGATGACACCACC...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATATGGCCTACAATTATATaGAGACCCAGCACAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AYLCAVQVSPFTMELYGIWPTII*RPSTTA Trigger: GGCAGTTGTGCTGGGTCTCCATATAATTGTAGGCCA...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| 3UTR CAA 72 bp | TTCTCTGTTGCTTGCTGCATTGGAGTCCAGACTATCTaGCACTGGATACTGATTGGAAGTTCCATACATACA | + |
|
Preference number: 4 (lower is better) Translates to: FSVACCIGVQTI*HWILIGSSIHT Trigger: TGTATGTATGGAACTTCCAATCAGTATCCAGTGCAAGATAGTCTGGACTCCAATGCAGCAAGCAACAGAGAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR TCA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATACTTCAAAGTTCCCATTaGTGGCATTGTCGAGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: AYLCAVQVSPFTMELYGILQSSH*WHCRVC Trigger: GCATACTCGACAATGCCATCAATGGGAACTTTGAAG...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | TTCAGTTACATAGAATTGGAACACTACTATGTAACAGAAATCACCACACTAGTGCACTGCAGGGTGAGCTaGGTCTGCTTCTTCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: FSYIELEHYYVTEITTLVHCRVS*VCFFLS Trigger: GGATAAGAAGAAGCAGACTCAGCTCACCCTGCAGTG...CACTAGTGTGGTGATTTCTGTTACATAGTAGTGTTCCAATTCTATGTAACTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | TTACTCGCATCCGAGTTCTTCATATACTTGTCCAATAAATTCTGTAGTTCCTGCTGGTACACAAGATGTTaGGCGCTGGGAAATTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLASEFFIYLSNKFCSSCWYTRC*ALGNSG Trigger: TCCAGAATTTCCCAGCGCTCAACATCTTGTGTACCA...GCAGGAACTACAGAATTTATTGGACAAGTATATGAAGAACTCGGATGCGAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR GCA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATATGGCATTGTCGAGTATaGACTGGCAGTGAGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AYLCAVQVSPFTMELYGIWHCRV*TGSEFC Trigger: ACAAAACTCACTGCCAGTGCATACTCGACAATGCCA...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | AATGGCATCAAGGCAGCAGAGCGTTTGAGTTTCACCTGCATTCTACATTGTTCACATTTCTTGCATTGTTaGAGGAATGAGGACATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NGIKAAERLSFTCILHCSHFLHC*RNEDIC Trigger: ACAGATGTCCTCATTCCTGCAACAATGCAAGAAATG...TGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 ENSMUST00000219771.2 |
||
| CDS-3UTR GCA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCATGGCATTCACCACATaGTGGTCAAAGAGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SIHYGVVWHSSDLKITFSMAFTT*WSKRAG Trigger: ACCAGCTCTCTTTGACCAGCATGTGGTGAATGCCAT...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACGAAGGAATCTGGGTTTaGAAGTTGGAAGCTACTACA | + |
|
Preference number: 4 (lower is better) Translates to: VVWHSSDLKITFSHCTFHEGIWV*KLEATT Trigger: TGTAGTAGCTTCCAACTTGCAAACCCAGATTCCTTC...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATATTCTCTGTTGCTTGCTaGATTGGAGTCCAGACTATC | + |
|
Preference number: 4 (lower is better) Translates to: AYLCAVQVSPFTMELYGIFSVAC*IGVQTI Trigger: GATAGTCTGGACTCCAATGCAGCAAGCAACAGAGAA...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACCCAGTTTCTCTTTCCTaGAGAAATCTAGGTAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VVWHSSDLKITFSHCTFHPVSLS*RNLGSE Trigger: CTCACTACCTAGATTTCTGCAGGAAAGAGAAACTGG...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCGGGAAGGAGATGGTCTaGCATTCCTTGCCAAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISIHYGVVWHSSDLKITFGKEMV*HSLPKV Trigger: CACTTTTGGCAAGGAATGCCAGACCATCTCCTTCCC...GAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TTACTCGCATCCGAGTTCTTCATATACTTGTCCAATAAATTCTGTAGTTCCTGCCAAAGAGAGCTGGTCTaGCAATCTGAGCAAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLASEFFIYLSNKFCSSCQRELV*QSEQDA Trigger: TGCATCTTGCTCAGATTGCCAGACCAGCTCTCTTTG...GCAGGAACTACAGAATTTATTGGACAAGTATATGAAGAACTCGGATGCGAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR CCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATCTGGTCAAAGAGAGCTaGTCTGGCAATCTGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHLVKES*SGNLSK Trigger: CTTGCTCAGATTGCCAGACCAGCTCTCTTTGACCAG...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCGGTGGTGTCATCAGATaGCCAGTACTTTGTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIHYGVVWHSSDLKITFSGGVIR*PVLCES Trigger: GCTTTCACAAAGTACTGGCCATCTGATGACACCACC...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCTCTGCTTGCTATGGCTaGAGAAATCGGTGGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SIHYGVVWHSSDLKITFSSACYG*RNRWCH Trigger: ATGACACCACCGATTTCTCCAGCCATAGCAAGCAGA...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACCAGACTATCTTGCACTaGATACTGATTGGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVWHSSDLKITFSHCTFHQTILH*ILIGSS Trigger: GGAACTTCCAATCAGTATCCAGTGCAAGATAGTCTG...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTTGTCTTTCCAAAGGTaGCTGCACAAGCTGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHLSFQR*LHKLAP Trigger: TGGAGCCAGCTTGTGCAGCCACCTTTGGAAAGACAA...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATATTGTCATTGTTAAATTaGGTCTCCATGGCCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AYLCAVQVSPFTMELYGILSLLN*VSMARR Trigger: TCTCCTGGCCATGGAGACTCAATTTAACAATGACAA...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATAGGCTTGATGCAGGGTaGGACTGTGTCCTAAACATA | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHRLDAG*DCVLNI Trigger: TATGTTTAGGACACAGTCTCACCCTGCATCAAGCCT...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCTGGCATTGTCGAGTATaGACTGGCAGTGAGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SIHYGVVWHSSDLKITFSWHCRV*TGSEFC Trigger: ACAAAACTCACTGCCAGTGCATACTCGACAATGCCA...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACTGGTCTGGCATTCCTTaGCAAAAGTGTAGTAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VVWHSSDLKITFSHCTFHWSGIP*QKCSKK Trigger: TTTCTTACTACACTTTTGGCAAGGAATGCCAGACCA...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCCTGTGTTCAAAACCTaGATGCTGTGTGACTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SIHYGVVWHSSDLKITFSPVFKT*MLCDSC Trigger: ACAAGAGTCACACAGCATGCAGGTTTTGAACACAGG...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATATACAGTAGTACGACATaGAACAGGAGACAATGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AYLCAVQVSPFTMELYGIYSSTT*NRRQCV Trigger: GACACATTGTCTCCTGTTGCATGTCGTACTACTGTA...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATAGTGAGCATAAAGAATaGACCGTGGGAGGCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHSEHKE*TVGGKL Trigger: GAGTTTGCCTCCCACGGTGCATTCTTTATGCTCACT...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATCAAAGAGAGCTGGTCTaGCAATCTGAGCAAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHQRELV*QSEQDA Trigger: TGCATCTTGCTCAGATTGCCAGACCAGCTCTCTTTG...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCTATTTGACCTGGGAGTaGCATGTTATCAGTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIHYGVVWHSSDLKITFSYLTWE*HVISVL Trigger: GAGGACACTGATAACATGCCACTCCCAGGTCAAATA...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACTCCATAACTGGAAGGTaGCCTACAATTATATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVWHSSDLKITFSHCTFHSITGR*PTIIWR Trigger: TCTCCATATAATTGTAGGCCACCTTCCAGTTATGGA...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCACTCTTGTGTGTGTGTaGATGGTCCATAACTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SIHYGVVWHSSDLKITFSTLVCV*MVHNWK Trigger: CTTCCAGTTATGGACCATCCACACACACACAAGAGT...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | TCACATTTTAGCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTCTTCAAAGTTCCCATTaGTGGCATTGTCGAGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: SHFSLFVCSTSISIHYGVLQSSH*WHCRVC Trigger: GCATACTCGACAATGCCATCAATGGGAACTTTGAAG...AACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGCTAAAATGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTTGAGCAGAAAGTCTTaGGCCCTCTTCTTCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHLSRKS*ALFFRD Trigger: ATCTCTGAAGAAGAGGGCTCAAGACTTTCTGCTCAA...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATCACACTGCTGATGACTaGAACATGTTGGTTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHHTADD*NMLVHH Trigger: ATGGTGAACCAACATGTTTCAGTCATCAGCAGTGTG...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATATCTTGCACTGGATACTaGTTGGAAGTTCCATACATA | + |
|
Preference number: 4 (lower is better) Translates to: AYLCAVQVSPFTMELYGISCTGY*LEVPYI Trigger: TATGTATGGAACTTCCAATCAGTATCCAGTGCAAGA...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | ATTGGAGTCCAGACTATCTTGCACTGGATACTGATTGGAAGTTCCATACATACATGGTCTGGCATTCCTTaGCAAAAGTGTAGTAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IGVQTILHWILIGSSIHTWSGIP*QKCSKK Trigger: TTTCTTACTACACTTTTGGCAAGGAATGCCAGACCA...TGTATGTATGGAACTTCCAATCAGTATCCAGTGCAAGATAGTCTGGACTCCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR GCA 90 bp | GAAGATGAAGGAATCTGGGTTTGCAAGTTGGAAGCTACTACAGTAGTACGACATCAACCATTCAATAAATaGCTCCACTGTAGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EDEGIWVCKLEATTVVRHQPFNK*LHCSIL Trigger: AAGAATGCTACAGTGGAGGCATTTATTGAATGGTTG...ATGTCGTACTACTGTAGTAGCTTCCAACTTGCAAACCCAGATTCCTTCATCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTACATAGAATTGGAACACTACTATGTAACAGAAATCACCACACTAGTGAAGTCTCTAGAAAGCTaGTGTTCAGTCCAGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FSYIELEHYYVTEITTLVKSLES*CSVQAM Trigger: CATGGCCTGGACTGAACAGCAGCTTTCTAGAGACTT...CACTAGTGTGGTGATTTCTGTTACATAGTAGTGTTCCAATTCTATGTAACTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATCCTGTGTTCAAAACCTaGATGCTGTGTGACTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHPVFKT*MLCDSC Trigger: ACAAGAGTCACACAGCATGCAGGTTTTGAACACAGG...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTTCTCTGTTGCTTGCTaGATTGGAGTCCAGACTATC | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHFSVAC*IGVQTI Trigger: GATAGTCTGGACTCCAATGCAGCAAGCAACAGAGAA...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | ATCTCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCCATTTCTCTGTTGCTTaGTGCATTGGAGTCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: ISIHYGVVWHSSDLKITFHFSVA*CIGVQT Trigger: AGTCTGGACTCCAATGCAGCAAGCAACAGAGAAATG...GAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | ATCTCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCACACCATTTCTCTGTTaGTTGCTGCATTGGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISIHYGVVWHSSDLKITFTPFLC*LLHWSP Trigger: TGGACTCCAATGCAGCAAGCAACAGAGAAATGGTGT...GAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACTTGCCGTTGTTTAACTaGATTTCTGATTTAACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VVWHSSDLKITFSHCTFHLPLFN*ISDLTP Trigger: GGGAGTTAAATCAGAAATGCAGTTAAACAACGGCAA...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCAATATCAGATACCATaGCATTCACCACATGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SIHYGVVWHSSDLKITFSQYQIP*HSPHAG Trigger: ACCAGCATGTGGTGAATGCCATGGTATCTGATATTG...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TCACATTTTAGCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTTATTTGACCTGGGAGTaGCATGTTATCAGTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHFSLFVCSTSISIHYGVYLTWE*HVISVL Trigger: GAGGACACTGATAACATGCCACTCCCAGGTCAAATA...AACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGCTAAAATGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TCACATTTTAGCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTACTCTTGTGTGTGTGTaGATGGTCCATAACTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHFSLFVCSTSISIHYGVTLVCV*MVHNWK Trigger: CTTCCAGTTATGGACCATCCACACACACACAAGAGT...AACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGCTAAAATGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCAGACTATCTTGCACTaGATACTGATTGGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIHYGVVWHSSDLKITFSQTILH*ILIGSS Trigger: GGAACTTCCAATCAGTATCCAGTGCAAGATAGTCTG...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGTTGCTTGCTGCATTaGAGTCCAGACTATCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHCCLLH*SPDYLA Trigger: TGCAAGATAGTCTGGACTCCAATGCAGCAAGCAACA...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCAGCGCTGGGAAATTCTaGAAGAAGTGTTCCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SIHYGVVWHSSDLKITFSSAGKF*KKCSCF Trigger: AAAACAGGAACACTTCTTCCAGAATTTCCCAGCGCT...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TCACATTTTAGCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTCAAGATGTTGAGCGCTaGGAAATTCTGGAAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHFSLFVCSTSISIHYGVQDVER*EILEEV Trigger: CACTTCTTCCAGAATTTCCCAGCGCTCAACATCTTG...AACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGCTAAAATGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTTGTCATTGTTAAATTaGGTCTCCATGGCCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHLSLLN*VSMARR Trigger: TCTCCTGGCCATGGAGACTCAATTTAACAATGACAA...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | TTCAGTTACATAGAATTGGAACACTACTATGTAACAGAAATCACCACACTAGTGCACACTGCTGATGACTaGAACATGTTGGTTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSYIELEHYYVTEITTLVHTADD*NMLVHH Trigger: ATGGTGAACCAACATGTTTCAGTCATCAGCAGTGTG...CACTAGTGTGGTGATTTCTGTTACATAGTAGTGTTCCAATTCTATGTAACTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACAAGTGTAGTAAGAAATaGTGGATCTCTTCAAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVWHSSDLKITFSHCTFHKCSKK*WISSKF Trigger: GAACTTTGAAGAGATCCAGCATTTCTTACTACACTT...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCTGGTCTGGCATTCCTTaGCAAAAGTGTAGTAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SIHYGVVWHSSDLKITFSWSGIP*QKCSKK Trigger: TTTCTTACTACACTTTTGGCAAGGAATGCCAGACCA...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATACAACCATTCAATAAATaGCTCCACTGTAGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AYLCAVQVSPFTMELYGIQPFNK*LHCSIL Trigger: AAGAATGCTACAGTGGAGGCATTTATTGAATGGTTG...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTACATAGAATTGGAACACTACTATGTAACAGAAATCACCACACTAGTGCATTTCTCTGTTGCTTaGTGCATTGGAGTCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FSYIELEHYYVTEITTLVHFSVA*CIGVQT Trigger: AGTCTGGACTCCAATGCAGCAAGCAACAGAGAAATG...CACTAGTGTGGTGATTTCTGTTACATAGTAGTGTTCCAATTCTATGTAACTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | ATTGGAGTCCAGACTATCTTGCACTGGATACTGATTGGAAGTTCCATACATACATGTAGTAAGAAATGCTaGATCTCTTCAAAGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IGVQTILHWILIGSSIHTCSKKC*ISSKFP Trigger: TGGGAACTTTGAAGAGATCCAGCATTTCTTACTACA...TGTATGTATGGAACTTCCAATCAGTATCCAGTGCAAGATAGTCTGGACTCCAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR CCA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACAGATCTTTCAGTTCTTaGAACACAGTAATAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VVWHSSDLKITFSHCTFHRSFSS*NTVIES Trigger: TGACTCTATTACTGTGTTCCAAGAACTGAAAGATCT...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCGCACTGGATACTGATTaGAAGTTCCATACATACACT | + |
|
Preference number: 4 (lower is better) Translates to: SIHYGVVWHSSDLKITFSALDTD*KFHTYT Trigger: AGTGTATGTATGGAACTTCCAATCAGTATCCAGTGC...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | TCACATTTTAGCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGGATTTTCTTATCAATaGGGGCTTCTGGCAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SHFSLFVCSTSISIHYGVGFSYQ*GLLASF Trigger: AAAACTTGCCAGAAGCCCTCATTGATAAGAAAATCC...AACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGCTAAAATGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATGGATTTTCTTATCAATaGGGGCTTCTGGCAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHGFSYQ*GLLASF Trigger: AAAACTTGCCAGAAGCCCTCATTGATAAGAAAATCC...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCATGGTAAGAAGAGCCTaGGACCCAATACTATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISIHYGVVWHSSDLKITFMVRRA*DPILFK Trigger: CTTAAATAGTATTGGGTCTCAGGCTCTTCTTACCAT...GAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCTCTTGCACTGGATACTaGTTGGAAGTTCCATACATA | + |
|
Preference number: 4 (lower is better) Translates to: ISIHYGVVWHSSDLKITFSCTGY*LEVPYI Trigger: TATGTATGGAACTTCCAATCAGTATCCAGTGCAAGA...GAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTACATAGAATTGGAACACTACTATGTAACAGAAATCACCACACTAGTGTACAGTAGTACGACATaGAACAGGAGACAATGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSYIELEHYYVTEITTLVYSSTT*NRRQCV Trigger: GACACATTGTCTCCTGTTGCATGTCGTACTACTGTA...CACTAGTGTGGTGATTTCTGTTACATAGTAGTGTTCCAATTCTATGTAACTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCTGTAGTAAGAAATGCTaGATCTCTTCAAAGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIHYGVVWHSSDLKITFSCSKKC*ISSKFP Trigger: TGGGAACTTTGAAGAGATCCAGCATTTCTTACTACA...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | TCACATTTTAGCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGCACTGGATACTGATTaGAAGTTCCATACATACACT | + |
|
Preference number: 4 (lower is better) Translates to: SHFSLFVCSTSISIHYGVALDTD*KFHTYT Trigger: AGTGTATGTATGGAACTTCCAATCAGTATCCAGTGC...AACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGCTAAAATGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGGAGGGGAAATTTTTaGCGAATTGTCTTTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISIHYGVVWHSSDLKITFRRGNF*RIVFPK Trigger: CTTTGGAAAGACAATTCGCCAAAAATTTCCCCTCCT...GAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | TTCAGTTACATAGAATTGGAACACTACTATGTAACAGAAATCACCACACTAGTGATGGTAAGAAGAGCCTaGGACCCAATACTATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSYIELEHYYVTEITTLVMVRRA*DPILFK Trigger: CTTAAATAGTATTGGGTCTCAGGCTCTTCTTACCAT...CACTAGTGTGGTGATTTCTGTTACATAGTAGTGTTCCAATTCTATGTAACTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR TCA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATATAGTAATGGTACTTTaGATGTCCTCTTGTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IHYGVVWHSSDLKITFSHIVMVL*MSSCSK Trigger: CTTGGAACAAGAGGACATTCAAAGTACCATTACTAT...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTACATAGAATTGGAACACTACTATGTAACAGAAATCACCACACTAGTGCATTTCTTGCATTGTTaGAGGAATGAGGACATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSYIELEHYYVTEITTLVHFLHC*RNEDIC Trigger: ACAGATGTCCTCATTCCTGCAACAATGCAAGAAATG...CACTAGTGTGGTGATTTCTGTTACATAGTAGTGTTCCAATTCTATGTAACTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | TCACATTTTAGCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTCAACCATTCAATAAATaGCTCCACTGTAGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHFSLFVCSTSISIHYGVQPFNK*LHCSIL Trigger: AAGAATGCTACAGTGGAGGCATTTATTGAATGGTTG...AACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGCTAAAATGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCTGTAGTAAGAAATGCTaGATCTCTTCAAAGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISIHYGVVWHSSDLKITFCSKKC*ISSKFP Trigger: TGGGAACTTTGAAGAGATCCAGCATTTCTTACTACA...GAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR GCA 90 bp | ATCTCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAAGTGTAGTAAGAAATaGTGGATCTCTTCAAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISIHYGVVWHSSDLKITFKCSKK*WISSKF Trigger: GAACTTTGAAGAGATCCAGCATTTCTTACTACACTT...GAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGATCTTTCAGTTCTTaGAACACAGTAATAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISIHYGVVWHSSDLKITFRSFSS*NTVIES Trigger: TGACTCTATTACTGTGTTCCAAGAACTGAAAGATCT...GAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS CCA 90 bp | CCAAGCAGCTGCGCGCAGCACTCCTCCGCGATCTCGGAGGGAAGTTaGGGCGAAGGCTGCTCCTGCACGAAAGCTTCCTCCAGTTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSSCAQHSSAISEGS*GEGCSCTKASSSSR Trigger: CCGGGAACTGGAGGAAGCTTTCGTGCAGGAGCAGCCTTCGCCCCAACTTCCCTCCGAGATCGCGGAGGAGTGCTGCGCGCAGCTGCTTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS GCA 90 bp | CAGCCAGCAGGTAAGCACTGTCCTCAGGGTAGACCAGCAAGCCCTTaGCAAGCAGCTGCGCGCAGCACTCCTCCGCGATCTCGGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QPAGKHCPQGRPASP*QAAARSTPPRSRRE Trigger: TTCCCTCCGAGATCGCGGAGGAGTGCTGCGCGCAGCTGCTTGGCAAGGGCTTGCTGGTCTACCCTGAGGACAGTGCTTACCTGCTGGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS GCA 90 bp | GAAAAGTTGCCGTTGTTTAACTGCATTTCTGATTTAACTCCCACCTaGAGCCCGGGATCTCCGCCTTTCTCACCGCTGCTCCGAGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EKLPLFNCISDLTPT*SPGSPPFSPLLRAP Trigger: GGGCGCTCGGAGCAGCGGTGAGAAAGGCGGAGATCCCGGGCTGCAGGTGGGAGTTAAATCAGAAATGCAGTTAAACAACGGCAACTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS GCA 90 bp | CATCATCTGCGTGATGCTCTTCTTCTGAGAGAGCTGTGGGTCGGCTaGTTTGGTCTTGCTCTCCTGGGTGTCCGCATCCTCTTCTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: HHLRDALLLRELWVG*FGLALLGVRILFFR Trigger: TCGGAAGAAGAGGATGCGGACACCCAGGAGAGCAAGACCAAAGCAGCCGACCCACAGCTCTCTCAGAAGAAGAGCATCACGCAGATGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATGGTGAGCATAGAGGCTaGATGCAGGGTGAGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNGEHRG*MQGETV Trigger: CACAGTCTCACCCTGCATCAAGCCTCTATGCTCACC...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS CCA 90 bp | CTTATCCTTCATCATCTGCGTGATGCTCTTCTTCTGAGAGAGCTGTaGGTCGGCTGCTTTGGTCTTGCTCTCCTGGGTGTCCGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LILHHLRDALLLREL*VGCFGLALLGVRIL Trigger: GAGGATGCGGACACCCAGGAGAGCAAGACCAAAGCAGCCGACCCACAGCTCTCTCAGAAGAAGAGCATCACGCAGATGATGAAGGATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATTCCGTGTCTGTGCTGTaGGATATGGTAAGAAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNSVSVL*DMVRRA Trigger: GGCTCTTCTTACCATATCCAACAGCACAGACACGGA...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | TATGTTGAGCAATGTGTTGGAGCTGAGAGAACTGTGCCCACGCTCGGGGGTCTGTCCGTGTCTGTGCTGTaGGATATGGTAAGAAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: YVEQCVGAERTVPTLGGLSVSVL*DMVRRA Trigger: GGCTCTTCTTACCATATCCAACAGCACAGACACGGA...CAGACCCCCGAGCGTGGGCACAGTTCTCTCAGCTCCAACACATTGCTCAACATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATCCCATAAACACGGTGTaGATGGGTGGTAAAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNPINTV*MGGKED Trigger: GTCCTCTTTACCACCCATCAACACCGTGTTTATGGG...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS TCA 90 bp | GTCTGCTTCTTCTTATCCTTCATCATCTGCGTGATGCTCTTCTTCTaGGAGAGCTGTGGGTCGGCTGCTTTGGTCTTGCTCTCCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VCFFLSFIICVMLFF*ESCGSAALVLLSWV Trigger: CACCCAGGAGAGCAAGACCAAAGCAGCCGACCCACAGCTCTCTCAGAAGAAGAGCATCACGCAGATGATGAAGGATAAGAAGAAGCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS GCA 90 bp | GTGTCCGCATCCTCTTCTTCCGAGGAAAAGTTGCCGTTGTTTAACTaGATTTCTGATTTAACTCCCACCTGCAGCCCGGGATCTCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VSASSSSEEKLPLFN*ISDLTPTCSPGSPP Trigger: AGGCGGAGATCCCGGGCTGCAGGTGGGAGTTAAATCAGAAATGCAGTTAAACAACGGCAACTTTTCCTCGGAAGAAGAGGATGCGGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCATTGCACCTTCCACCCTCTCTTCTCTCGTGGCAGCTGGAGGTGGATAATGGAGTCCAGACTATCTaGCACTGGATACTGATTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QPLHLPPSLLSWQLEVDNGVQTI*HWILIG Trigger: TCCAATCAGTATCCAGTGCAAGATAGTCTGGACTCC...ATTATCCACCTCCAGCTGCCACGAGAGAAGAGAGGGTGGAAGGTGCAATGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | AGAACTGTGCCCACGCTCGGGGGTCTGCTCGCCATTGGCCCTTGGTTAATAACATCTTCAAAGTTCCCATaGATGGCATTGTCGAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: RTVPTLGGLLAIGPWLITSSKFP*MALSSM Trigger: CATACTCGACAATGCCATCAATGGGAACTTTGAAGA...TGTTATTAACCAAGGGCCAATGGCGAGCAGACCCCCGAGCGTGGGCACAGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR CAA 90 bp | GAGCTCGGGGAAGCTGTGAAGGCAGCTTTACTCGCATCCGAGTTCTTCATATACCTTAGAAATGCATCCTaGGTACACAAGATGTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ELGEAVKAALLASEFFIYLRNAS*VHKMLS Trigger: GCTCAACATCTTGTGTACCAAGGATGCATTTCTAAG...GTATATGAAGAACTCGGATGCGAGTAAAGCTGCCTTCACAGCTTCCCCGAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR CAA 90 bp | CCATTGGGAGAATTAGAAGGCAATGTTGACCCTTGGCAGCTGCCAGCTCCTGCAATGAGAGTATCAACCTaGTCCTTAGAAATGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PLGELEGNVDPWQLPAPAMRVST*SLEMHP Trigger: AGGATGCATTTCTAAGGACAAGGTTGATACTCTCAT...TGCAGGAGCTGGCAGCTGCCAAGGGTCAACATTGCCTTCTAATTCTCCCAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAGGCAGAGGGACATAGGATGTCTCCACGTGGCTTTCGTTCTTCACAGTGTGAGATCTTTCAGTTCTaGGAACACAGTAATAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: WKAEGHRMSPRGFRSSQCEIFQF*EHSNRV Trigger: GACTCTATTACTGTGTTCCAAGAACTGAAAGATCTC...ACACTGTGAAGAACGAAAGCCACGTGGAGACATCCTATGTCCCTCTGCCTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219771.2 |
||
| CDS TCA 90 bp | GTACTCATCCAGAAGCATTCGGATCAGATGGAAAGAGCCAAAACTTaGTGCGTTGTTCAAGGTAAGATTATGCATCACGCGGGCACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VLIQKHSDQMERAKT*CVVQGKIMHHAGTK Trigger: TTTGGTGCCCGCGTGATGCATAATCTTACCTTGAACAACGCATCAAGTTTTGGCTCTTTCCATCTGATCCGAATGCTTCTGGATGAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS-3UTR CAA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACCCCATAAACACGGTGTaGATGGGTGGTAAAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VVWHSSDLKITFSHCTFHPINTV*MGGKED Trigger: GTCCTCTTTACCACCCATCAACACCGTGTTTATGGG...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATATCCGTGTCTGTGCTGTaGGATATGGTAAGAAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AYLCAVQVSPFTMELYGISVSVL*DMVRRA Trigger: GGCTCTTCTTACCATATCCAACAGCACAGACACGGA...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | AATGGCATCAAGGCAGCAGAGCGTTTGAGTTTCACCTGCATTCTACATTGTTCATTTGAGCAGAAAGTCTaGAGCCCTCTTCTTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NGIKAAERLSFTCILHCSFEQKV*SPLLQR Trigger: TCTCTGAAGAAGAGGGCTCAAGACTTTCTGCTCAAA...TGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | ATCTCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCGGTGAGCATAGAGGCTaGATGCAGGGTGAGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ISIHYGVVWHSSDLKITFGEHRG*MQGETV Trigger: CACAGTCTCACCCTGCATCAAGCCTCTATGCTCACC...GAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATATGCTCCCCGAAAACCTaGTCAAGCCCTTTCCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: AYLCAVQVSPFTMELYGICSPKT*SSPFQN Trigger: ATTCTGGAAAGGGCTTGACAAGGTTTTCGGGGAGCA...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATACCCTCATTCTTCAGTTaGCTCCCCGAAAACCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AYLCAVQVSPFTMELYGIPSFFS*LPENLV Trigger: GACAAGGTTTTCGGGGAGCAAACTGAAGAATGAGGG...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS GCA 90 bp | CCAGTTTCTCTTTCCTGCAGAAATCTAGGTAGTGAGCATAAAGAATaGACCGTGGGAGGCAAACTCCTTCACACACTATGTAATTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PVSLSCRNLGSEHKE*TVGGKLLHTLCNCL Trigger: AAGACAATTACATAGTGTGTGAAGGAGTTTGCCTCCCACGGTGCATTCTTTATGCTCACTACCTAGATTTCTGCAGGAAAGAGAAACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS-3UTR CAA 90 bp | AATGGCATCAAGGCAGCAGAGCGTTTGAGTTTCACCTGCATTCTACATTGTTCATCTTCAAAGTTCCCATaGATGGCATTGTCGAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: NGIKAAERLSFTCILHCSSSKFP*MALSSM Trigger: CATACTCGACAATGCCATCAATGGGAACTTTGAAGA...TGAACAATGTAGAATGCAGGTGAAACTCAAACGCTCTGCTGCCTTGATGCCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 ENSMUST00000219771.2 |
||
| CDS-3UTR CAA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATAATGTTGAGCAATGTGTaGGAGCTGAGAGAACTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AYLCAVQVSPFTMELYGIMLSNV*ELRELC Trigger: GCACAGTTCTCTCAGCTCCAACACATTGCTCAACAT...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS TCA 90 bp | GTATCAACCTTGTCCTTAGAAATGCATCCTTGGTACACAAGATGTTaGGCGCTGGGAAATTCTGGAAGAAGTGTTCCTGTTTTTGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VSTLSLEMHPWYTRC*ALGNSGRSVPVFEL Trigger: TAGCTCAAAAACAGGAACACTTCTTCCAGAATTTCCCAGCGCTCAACATCTTGTGTACCAAGGATGCATTTCTAAGGACAAGGTTGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 ENSMUST00000219771.2 |
||
| CDS-3UTR CAA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACTTTGTCATTGTTAAATaGAGTCTCCATGGCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VVWHSSDLKITFSHCTFHFVIVK*SLHGQE Trigger: CTCCTGGCCATGGAGACTCAATTTAACAATGACAAA...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCGGAGTCCAGACTATCTaGCACTGGATACTGATTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SIHYGVVWHSSDLKITFSGVQTI*HWILIG Trigger: TCCAATCAGTATCCAGTGCAAGATAGTCTGGACTCC...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | TCACATTTTAGCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTCTGTTGCTTGCTGCATaGGAGTCCAGACTATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SHFSLFVCSTSISIHYGVLLLAA*ESRLSC Trigger: GCAAGATAGTCTGGACTCCAATGCAGCAAGCAACAG...AACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGCTAAAATGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATCCATTTCTCTGTTGCTaGCTGCATTGGAGTCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: IHYGVVWHSSDLKITFSHPFLCC*LHWSPD Trigger: GTCTGGACTCCAATGCAGCAAGCAACAGAGAAATGG...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | ATCTCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCGACACCATTTCTCTGTaGCTTGCTGCATTGGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISIHYGVVWHSSDLKITFDTISL*LAALES Trigger: GGACTCCAATGCAGCAAGCAACAGAGAAATGGTGTC...GAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATATCTTCAAAGTTCCCATaGATGGCATTGTCGAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: AYLCAVQVSPFTMELYGISSKFP*MALSSM Trigger: CATACTCGACAATGCCATCAATGGGAACTTTGAAGA...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATAACTTTCAGGCATTTCTaGCATTGTTGCAGGAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: AYLCAVQVSPFTMELYGITFRHF*HCCRNE Trigger: CTCATTCCTGCAACAATGCAAGAAATGCCTGAAAGT...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | GTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTGCACCTTCCACGAGATCTTTCAGTTCTaGGAACACAGTAATAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VVWHSSDLKITFSHCTFHEIFQF*EHSNRV Trigger: GACTCTATTACTGTGTTCCAAGAACTGAAAGATCTC...GTGGAAGGTGCAATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATATTTGTCATTGTTAAATaGAGTCTCCATGGCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AYLCAVQVSPFTMELYGIFVIVK*SLHGQE Trigger: CTCCTGGCCATGGAGACTCAATTTAACAATGACAAA...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | TTCAGTTACATAGAATTGGAACACTACTATGTAACAGAAATCACCACACTAGTGGACACCATTTCTCTGTaGCTTGCTGCATTGGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSYIELEHYYVTEITTLVDTISL*LAALES Trigger: GGACTCCAATGCAGCAAGCAACAGAGAAATGGTGTC...CACTAGTGTGGTGATTTCTGTTACATAGTAGTGTTCCAATTCTATGTAACTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS TCA 90 bp | ATGTCAGATTCCGTGTCTGTGCTGTTGGATATGGTAAGAAGAGCCTaGGACCCAATACTATTTAAGTCAACCTTTTCAATATCAGATACC | + |
|
Preference number: 5 (lower is better) Translates to: MSDSVSVLLDMVRRA*DPILFKSTFSISDT Trigger: GGTATCTGATATTGAAAAGGTTGACTTAAATAGTATTGGGTCTCAGGCTCTTCTTACCATATCCAACAGCACAGACACGGAATCTGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 ENSMUST00000219364.2 ENSMUST00000219771.2 |
||
| CDS TCA 90 bp | TCTTCAAAGTTCCCATTGATGGCATTGTCGAGTATGCACTGGCAGTaGGTTTTGTACATCATTATGAGAGTATCAACCTTGTCCTTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSKFPLMALSSMHWQ*VLYIIMRVSTLSLE Trigger: TTCTAAGGACAAGGTTGATACTCTCATAATGATGTACAAAACTCACTGCCAGTGCATACTCGACAATGCCATCAATGGGAACTTTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 ENSMUST00000219771.2 |
||
| CDS-3UTR CAA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTTTGAGCAGAAAGTCTaGAGCCCTCTTCTTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: IHYGVVWHSSDLKITFSHFEQKV*SPLLQR Trigger: TCTCTGAAGAAGAGGGCTCAAGACTTTCTGCTCAAA...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | TTCAGTTACATAGAATTGGAACACTACTATGTAACAGAAATCACCACACTAGTGATGTTGAGCAATGTGTaGGAGCTGAGAGAACTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSYIELEHYYVTEITTLVMLSNV*ELRELC Trigger: GCACAGTTCTCTCAGCTCCAACACATTGCTCAACAT...CACTAGTGTGGTGATTTCTGTTACATAGTAGTGTTCCAATTCTATGTAACTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATAGAGGAAAAGTTGCCGTaGTTTAACTGCATTTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: AYLCAVQVSPFTMELYGIEEKLP*FNCISD Trigger: ATCAGAAATGCAGTTAAACAACGGCAACTTTTCCTC...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCTCTTCCGAGGAAAAGTaGCCGTTGTTTAACTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: SIHYGVVWHSSDLKITFSSSEEK*PLFNCI Trigger: AATGCAGTTAAACAACGGCAACTTTTCCTCGGAAGA...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | GCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTGTATGGCATAATGAGAGTATCAACCTaGTCCTTAGAAATGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: AYLCAVQVSPFTMELYGIMRVST*SLEMHP Trigger: AGGATGCATTTCTAAGGACAAGGTTGATACTCTCAT...TATGCCATACAACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS GCA 90 bp | TTCTTCAGAGATCTTCCATTTTGTTTGCTCATCTTAATAACTCTCTaGTCTACCACAGTGTCCAACCATTCAATAAATGCCTCCACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: FFRDLPFCLLILITL*STTVSNHSINASTV Trigger: TACAGTGGAGGCATTTATTGAATGGTTGGACACTGTGGTAGAGCAGAGAGTTATTAAGATGAGCAAACAAAATGGAAGATCTCTGAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS-3UTR CAA 90 bp | TCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCGAGATCTTTCAGTTCTaGGAACACAGTAATAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SIHYGVVWHSSDLKITFSEIFQF*EHSNRV Trigger: GACTCTATTACTGTGTTCCAAGAACTGAAAGATCTC...GCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | ATCTCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCATCTGGGTTTGCAAGTaGGAAGCTACTACAGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: ISIHYGVVWHSSDLKITFIWVCK*EATTVV Trigger: TACTACTGTAGTAGCTTCCAACTTGCAAACCCAGAT...GAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | TCACATTTTAGCCTATTTGTGTGCAGTACAAGTATCTCCATTCACTATGGAGTTATCTGGGTTTGCAAGTaGGAAGCTACTACAGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SHFSLFVCSTSISIHYGVIWVCK*EATTVV Trigger: TACTACTGTAGTAGCTTCCAACTTGCAAACCCAGAT...AACTCCATAGTGAATGGAGATACTTGTACTGCACACAAATAGGCTAAAATGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | TTCAGTTACATAGAATTGGAACACTACTATGTAACAGAAATCACCACACTAGTGACTTTCAGGCATTTCTaGCATTGTTGCAGGAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: FSYIELEHYYVTEITTLVTFRHF*HCCRNE Trigger: CTCATTCCTGCAACAATGCAAGAAATGCCTGAAAGT...CACTAGTGTGGTGATTTCTGTTACATAGTAGTGTTCCAATTCTATGTAACTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | ATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCAGCCATTTCCAAGTCTTCGAGTaGTTAGGAGGGGAAATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: IHYGVVWHSSDLKITFSHFQVFE*LGGEIF Trigger: AAAAATTTCCCCTCCTAACAACTCGAAGACTTGGAA...ATGGCTGAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | TTCAGTTACATAGAATTGGAACACTACTATGTAACAGAAATCACCACACTAGTGCTTAGAAATGCATCCTaGGTACACAAGATGTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSYIELEHYYVTEITTLVLRNAS*VHKMLS Trigger: GCTCAACATCTTGTGTACCAAGGATGCATTTCTAAG...CACTAGTGTGGTGATTTCTGTTACATAGTAGTGTTCCAATTCTATGTAACTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS-3UTR CAA 90 bp | ATCTCCATTCACTATGGAGTTGTATGGCATAGCAGTGATCTGAAAATAACATTCCATAGTAATGGTACTTaGAATGTCCTCTTGTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ISIHYGVVWHSSDLKITFHSNGT*NVLLFQ Trigger: TTGGAACAAGAGGACATTCAAAGTACCATTACTATG...GAATGTTATTTTCAGATCACTGCTATGCCATACAACTCCATAGTGAATGGAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122922.10 |
||
| CDS CCA 72 bp | TGCGCGCAGCACTCCTCCGCGATCTCGGAGGGAAGTTaGGGCGAAGGCTGCTCCTGCACGAAAGCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CAQHSSAISEGS*GEGCSCTKASS Trigger: GGAGGAAGCTTTCGTGCAGGAGCAGCCTTCGCCCCAACTTCCCTCCGAGATCGCGGAGGAGTGCTGCGCGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS CCA 72 bp | GAGAGCTGTGGGTCGGCTGCTTTGGTCTTGCTCTCCTaGGTGTCCGCATCCTCTTCTTCCGAGGAAAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ESCGSAALVLLS*VSASSSSEEKL Trigger: CAACTTTTCCTCGGAAGAAGAGGATGCGGACACCCAGGAGAGCAAGACCAAAGCAGCCGACCCACAGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS CCA 72 bp | TGCTCTTCTTCTGAGAGAGCTGTGGGTCGGCTGCTTTaGTCTTGCTCTCCTGGGTGTCCGCATCCTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: CSSSERAVGRLL*SCSPGCPHPLL Trigger: AAGAAGAGGATGCGGACACCCAGGAGAGCAAGACCAAAGCAGCCGACCCACAGCTCTCTCAGAAGAAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS CCA 72 bp | CATCATCTGCGTGATGCTCTTCTTCTGAGAGAGCTGTaGGTCGGCTGCTTTGGTCTTGCTCTCCTGGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HHLRDALLLREL*VGCFGLALLGV Trigger: GACACCCAGGAGAGCAAGACCAAAGCAGCCGACCCACAGCTCTCTCAGAAGAAGAGCATCACGCAGATGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS GCA 72 bp | CCGTTGTTTAACTGCATTTCTGATTTAACTCCCACCTaGAGCCCGGGATCTCCGCCTTTCTCACCGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PLFNCISDLTPT*SPGSPPFSPLL Trigger: GAGCAGCGGTGAGAAAGGCGGAGATCCCGGGCTGCAGGTGGGAGTTAAATCAGAAATGCAGTTAAACAACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
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| CDS CAA 90 bp | CTCTCCTGGGTGTCCGCATCCTCTTCTTCCGAGGAAAAGTTGCCGTaGTTTAACTGCATTTCTGATTTAACTCCCACCTGCAGCCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSWVSASSSSEEKLP*FNCISDLTPTCSPG Trigger: TCCCGGGCTGCAGGTGGGAGTTAAATCAGAAATGCAGTTAAACAACGGCAACTTTTCCTCGGAAGAAGAGGATGCGGACACCCAGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS TCA 72 bp | GCTGAGTCTGCTTCTTCTTATCCTTCATCATCTGCGTaGTGCTCTTCTTCTGAGAGAGCTGTGGGTCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AESASSYPSSSA*CSSSERAVGRL Trigger: CAGCCGACCCACAGCTCTCTCAGAAGAAGAGCATCACGCAGATGATGAAGGATAAGAAGAAGCAGACTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS CAA 90 bp | GTCTTGCTCTCCTGGGTGTCCGCATCCTCTTCTTCCGAGGAAAAGTaGCCGTTGTTTAACTGCATTTCTGATTTAACTCCCACCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VLLSWVSASSSSEEK*PLFNCISDLTPTCS Trigger: GCTGCAGGTGGGAGTTAAATCAGAAATGCAGTTAAACAACGGCAACTTTTCCTCGGAAGAAGAGGATGCGGACACCCAGGAGAGCAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS TCA 72 bp | TTCTTATCCTTCATCATCTGCGTGATGCTCTTCTTCTaGGAGAGCTGTGGGTCGGCTGCTTTGGTCTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FLSFIICVMLFF*ESCGSAALVLL Trigger: GAGCAAGACCAAAGCAGCCGACCCACAGCTCTCTCAGAAGAAGAGCATCACGCAGATGATGAAGGATAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS GCA 72 bp | TCCTCTTCTTCCGAGGAAAAGTTGCCGTTGTTTAACTaGATTTCTGATTTAACTCCCACCTGCAGCCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSEEKLPLFN*ISDLTPTCSPG Trigger: TCCCGGGCTGCAGGTGGGAGTTAAATCAGAAATGCAGTTAAACAACGGCAACTTTTCCTCGGAAGAAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS GCA 72 bp | GGGAAATTTTTGGCGAATTGTCTTTCCAAAGGTGGCTaGACAAGCTGGCTCCAGTTTCTCTTTCCTGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GKFLANCLSKGG*TSWLQFLFPAE Trigger: TTCTGCAGGAAAGAGAAACTGGAGCCAGCTTGTGCAGCCACCTTTGGAAAGACAATTCGCCAAAAATTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS CCA 72 bp | TACCATGGCATTCACCACATGCTGGTCAAAGAGAGCTaGTCTGGCAATCTGAGCAAGATGCAAGAAAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: YHGIHHMLVKES*SGNLSKMQERC Trigger: ACATCTTTCTTGCATCTTGCTCAGATTGCCAGACCAGCTCTCTTTGACCAGCATGTGGTGAATGCCATGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 ENSMUST00000219364.2 ENSMUST00000219771.2 |
||
| CDS CAA 72 bp | GTGTCCGCATCCTCTTCTTCCGAGGAAAAGTTGCCGTaGTTTAACTGCATTTCTGATTTAACTCCCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSASSSSEEKLP*FNCISDLTPTC Trigger: GCAGGTGGGAGTTAAATCAGAAATGCAGTTAAACAACGGCAACTTTTCCTCGGAAGAAGAGGATGCGGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS GCA 72 bp | CTTTCCTGCAGAAATCTAGGTAGTGAGCATAAAGAATaGACCGTGGGAGGCAAACTCCTTCACACACTATGT | + |
|
Preference number: 6 (lower is better) Translates to: LSCRNLGSEHKE*TVGGKLLHTLC Trigger: ACATAGTGTGTGAAGGAGTTTGCCTCCCACGGTGCATTCTTTATGCTCACTACCTAGATTTCTGCAGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS CCA 72 bp | GTTCCAAGTCTTCGAGTTGTTAGGAGGGGAAATTTTTaGCGAATTGTCTTTCCAAAGGTGGCTGCACAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VPSLRVVRRGNF*RIVFPKVAAQA Trigger: AGCTTGTGCAGCCACCTTTGGAAAGACAATTCGCCAAAAATTTCCCCTCCTAACAACTCGAAGACTTGGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS CAA 72 bp | ATTCGGATCAGATGGAAAGAGCCAAAACTTGATGCGTaGTTCAAGGTAAGATTATGCATCACGCGGGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: IRIRWKEPKLDA*FKVRLCITRAP Trigger: TGGTGCCCGCGTGATGCATAATCTTACCTTGAACAACGCATCAAGTTTTGGCTCTTTCCATCTGATCCGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS TCA 72 bp | CAGAAGCATTCGGATCAGATGGAAAGAGCCAAAACTTaGTGCGTTGTTCAAGGTAAGATTATGCATCACGCG | + |
|
Preference number: 6 (lower is better) Translates to: QKHSDQMERAKT*CVVQGKIMHHA Trigger: CGCGTGATGCATAATCTTACCTTGAACAACGCATCAAGTTTTGGCTCTTTCCATCTGATCCGAATGCTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS CAA 72 bp | AACCACCCTCATTCTTCAGTTTGCTCCCCGAAAACCTaGTCAAGCCCTTTCCAGAATAAACAGAGTGGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: NHPHSSVCSPKT*SSPFQNKQSGN Trigger: ATTACCACTCTGTTTATTCTGGAAAGGGCTTGACAAGGTTTTCGGGGAGCAAACTGAAGAATGAGGGTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
||
| CDS CAA 72 bp | CTTGTCCTTAGAAATGCATCCTTGGTACACAAGATGTaGAGCGCTGGGAAATTCTGGAAGAAGTGTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LVLRNASLVHKM*SAGKFWKKCSC Trigger: ACAGGAACACTTCTTCCAGAATTTCCCAGCGCTCAACATCTTGTGTACCAAGGATGCATTTCTAAGGACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 ENSMUST00000219771.2 |
||
| CDS CAA 72 bp | TATGAGAGTATCAACCTTGTCCTTAGAAATGCATCCTaGGTACACAAGATGTTGAGCGCTGGGAAATTCTGG | + |
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Preference number: 6 (lower is better) Translates to: YESINLVLRNAS*VHKMLSAGKFW Trigger: CCAGAATTTCCCAGCGCTCAACATCTTGTGTACCAAGGATGCATTTCTAAGGACAAGGTTGATACTCTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 ENSMUST00000219771.2 |
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| CDS TCA 72 bp | TCCGTGTCTGTGCTGTTGGATATGGTAAGAAGAGCCTaGGACCCAATACTATTTAAGTCAACCTTTTCAATA | + |
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Preference number: 6 (lower is better) Translates to: SVSVLLDMVRRA*DPILFKSTFSI Trigger: TATTGAAAAGGTTGACTTAAATAGTATTGGGTCTCAGGCTCTTCTTACCATATCCAACAGCACAGACACGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 ENSMUST00000219364.2 ENSMUST00000219771.2 |
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| CDS GCA 72 bp | TGTCAAGCCCTTTCCAGAATAAACAGAGTGGTAATATaGACTGCTTTCTTTGATGCCAATCCCATAGTAATG | + |
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Preference number: 6 (lower is better) Translates to: CQALSRINRVVI*TAFFDANPIVM Trigger: CATTACTATGGGATTGGCATCAAAGAAAGCAGTGCATATTACCACTCTGTTTATTCTGGAAAGGGCTTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122922.10 ENSMUST00000219364.2 |
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| CDS CAA 90 bp | AAATGCCTCCACTGTAGCATTCTTCTTAAGGAGATCTTTCAGTTCTaGGAACACAGTAATAGAGTCATGTTCACTGTAGATGTCAGATTC | + |
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Preference number: 6 (lower is better) Translates to: KCLHCSILLKEIFQF*EHSNRVMFTVDVRF Trigger: GAATCTGACATCTACAGTGAACATGACTCTATTACTGTGTTCCAAGAACTGAAAGATCTCCTTAAGAAGAATGCTACAGTGGAGGCATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 ENSMUST00000219364.2 ENSMUST00000219771.2 |
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| CDS GCA 72 bp | ACTGCAAAGAAAACTTTCAGGCATTTCTTGCATTGTTaGAGGAATGAGGACATCTGTAAGAACCTCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: TAKKTFRHFLHC*RNEDICKNLFK Trigger: TTTGAAGAGGTTCTTACAGATGTCCTCATTCCTGCAACAATGCAAGAAATGCCTGAAAGTTTTCTTTGCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219364.2 |
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| CDS GCA 72 bp | TTTCTTATATCTGCTAACAAACTTTCAGGCATTTCTTaGATTGTTGCAGGAATGAGGACATCTGTAAGAACC | + |
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Preference number: 6 (lower is better) Translates to: FLISANKLSGIS*IVAGMRTSVRT Trigger: GGTTCTTACAGATGTCCTCATTCCTGCAACAATGCAAGAAATGCCTGAAAGTTTGTTAGCAGATATAAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050455.5 ENSMUST00000122922.10 ENSMUST00000219771.2 |
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