Pregenerated sensors for RFWD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033596Ensembl transcript IDs: ENSMUST00000038739.5
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGTTGAGGTCCTGGCACTCCCCCACCCCAATCCAAATTTATTGTaGAAATGCAAATTGCCACGGCAAGGCTTGGTATTTAGCTTAGCT | + |
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Preference number: 1 (lower is better) Translates to: QVEVLALPHPNPNLL*KCKLPRQGLVFSLA Trigger: AGCTAAGCTAAATACCAAGCCTTGCCGTGGCAATTTGCATTTCCACAATAAATTTGGATTGGGGTGGGGGAGTGCCAGGACCTCAACCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR CCA 90 bp | TGCAATGAACTTACTGCACAAAGCTTAAAGCTATGCCTTTACATATaGCTAGCTAGTCAGCCAATTCCACCATTGGACTTATCAACATTC | + |
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Preference number: 1 (lower is better) Translates to: CNELTAQSLKLCLYI*LASQPIPPLDLSTF Trigger: GAATGTTGATAAGTCCAATGGTGGAATTGGCTGACTAGCTAGCCATATGTAAAGGCATAGCTTTAAGCTTTGTGCAGTAAGTTCATTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR CAA 90 bp | CTGGCACTCCCCCACCCCAATCCAAATTTATTGTGGAAATGCAAATaGCCACGGCAAGGCTTGGTATTTAGCTTAGCTTCTGTGGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: LALPHPNPNLLWKCK*PRQGLVFSLASVVA Trigger: TGCTACCACAGAAGCTAAGCTAAATACCAAGCCTTGCCGTGGCAATTTGCATTTCCACAATAAATTTGGATTGGGGTGGGGGAGTGCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR-3UTR TCA 90 bp | AGCGTGCTGGGACCAAAGGCATGTATTACCTCAACTGTCTGGAAGCTGACATTTCCAAGGGTACTCATTTaGTGCCAACAGCACACACAA | + |
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Preference number: 2 (lower is better) Translates to: SVLGPKACITSTVWKLTFPRVLI*CQQHTQ Trigger: TTGTGTGTGCTGTTGGCATCAAATGAGTACCCTTGG...AAATGTCAGCTTCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR-3UTR CCA 90 bp | AAGCTCCAGGCCCAGGCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGTTGGGACCACAAGAATaGAAGTTTCTGAGTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: KLQAQAATLKHHSIKSTWLGPQE*KFLSVF Trigger: GAAGACACTCAGAAACTTCCATTCTTGTGGTCCCAA...CCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGCCTGGGCCTGGAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR-3UTR GCA 90 bp | AAGCTCCAGGCCCAGGCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGCAAGTCTTTAACAATTaGCCAAACACCTCTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: KLQAQAATLKHHSIKSTWQVFNN*PNTSSL Trigger: AAGGGAAGAGGTGTTTGGGCAATTGTTAAAGACTTG...CCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGCCTGGGCCTGGAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR CAA 90 bp | CCCAATCCAAATTTATTGTGGAAATGCAAATTGCCACGGCAAGGCTaGGTATTTAGCTTAGCTTCTGTGGTAGCAAATCCCCAGTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: PNPNLLWKCKLPRQG*VFSLASVVANPQSA Trigger: GGCTGACTGGGGATTTGCTACCACAGAAGCTAAGCTAAATACCAAGCCTTGCCGTGGCAATTTGCATTTCCACAATAAATTTGGATTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR-3UTR GCA 90 bp | AATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCTTAGGGGCAGTGGCTTACCTCACCTCTCACAATaGAATGAACTTACTGCACAA | + |
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Preference number: 2 (lower is better) Translates to: NQTCCLCLETRCLRGSGLPHLSQ*NELTAQ Trigger: TTGTGCAGTAAGTTCATTGCATTGTGAGAGGTGAGG...TAAGCCACTGCCCCTAAGACACCTTGTCTCAAGGCATAGGCAACATGTCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGGGGAAGAAAGGGAGAGAGAAATCAAGTCACTaGAAGGTTATGAGCATTCAG | + |
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Preference number: 2 (lower is better) Translates to: AATLKHHSIKSTWGKKGREKSSH*KVMSIQ Trigger: CTGAATGCTCATAACCTTTCAGTGACTTGATTTCTC...TCTCCCTTTCTTCCCCCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGGGGAAGAAAGGGAGACAAAGCTTAAAGCTATaGCTTTACATATGGCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: AATLKHHSIKSTWGKKGRQSLKL*LYIWLA Trigger: AGCTAGCCATATGTAAAGGCATAGCTTTAAGCTTTG...TCTCCCTTTCTTCCCCCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR-3UTR CCA 90 bp | AGCGTGCTGGGACCAAAGGCATGTATTACCTCAACTGTCTGGAAGCTGACATTTGGGGAAGTTTTTACTTaGGAATTATCTATCCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SVLGPKACITSTVWKLTFGEVFT*ELSILQ Trigger: CTGAAGGATAGATAATTCCCAAGTAAAAACTTCCCC...AAATGTCAGCTTCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR CAA 90 bp | GGTATGGGAGAAATCAAGTCACTGAAAGGTTATGAGCATTCAGACTaGGAAATAGGTCAAATTCCACACAAGATATTAATGGTGCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: GMGEIKSLKGYEHSD*EIGQIPHKILMVPF Trigger: AAAGGGCACCATTAATATCTTGTGTGGAATTTGACCTATTTCCAAGTCTGAATGCTCATAACCTTTCAGTGACTTGATTTCTCCCATACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR GCA 72 bp | CTCACAGAAGTACCAGACACTGGGGGCAGACAGCAGTaGAGGGGTATGGGAGAAATCAAGTCACTGAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: LTEVPDTGGRQQ*RGMGEIKSLKG Trigger: ACCTTTCAGTGACTTGATTTCTCCCATACCCCTGCACTGCTGTCTGCCCCCAGTGTCTGGTACTTCTGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR CCA 72 bp | CTCATAGGGATCTACCAGTTTCTGCCTTCAGCGTGCTaGGACCAAAGGCATGTATTACCTCAACTGTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: LIGIYQFLPSAC*DQRHVLPQLSG Trigger: TCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCTGAAGGCAGAAACTGGTAGATCCCTATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR GCA 72 bp | GAACTCATAGGGATCTACCAGTTTCTGCCTTCAGCGTaGTGGGACCAAAGGCATGTATTACCTCAACTGTCT | + |
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Preference number: 3 (lower is better) Translates to: ELIGIYQFLPSA*WDQRHVLPQLS Trigger: AGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCTGAAGGCAGAAACTGGTAGATCCCTATGAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR GCA 72 bp | GCACTCCCCCACCCCAATCCAAATTTATTGTGGAAATaGAAATTGCCACGGCAAGGCTTGGTATTTAGCTTA | + |
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Preference number: 3 (lower is better) Translates to: ALPHPNPNLLWK*KLPRQGLVFSL Trigger: TAAGCTAAATACCAAGCCTTGCCGTGGCAATTTGCATTTCCACAATAAATTTGGATTGGGGTGGGGGAGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR-3UTR CAA 90 bp | AGCGTGCTGGGACCAAAGGCATGTATTACCTCAACTGTCTGGAAGCTGACATTTACAACCCCAAAATGCTaGGTGCATACTCATATTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SVLGPKACITSTVWKLTFTTPKC*VHTHIL Trigger: TAGAATATGAGTATGCACCAAGCATTTTGGGGTTGT...AAATGTCAGCTTCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR TCA 72 bp | AAAAATTTCCAGGCAAGATTCCCAAGGGTACTCATTTaGTGCCAACAGCACACACAATCCTGGTGTCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: KNFQARFPRVLI*CQQHTQSWCLS Trigger: ACTGAGACACCAGGATTGTGTGTGCTGTTGGCATCAAATGAGTACCCTTGGGAATCTTGCCTGGAAATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR-3UTR CAA 90 bp | GCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGGGGAAGAAAGGGAGATATGAGCATTCAGACTaGGAAATAGGTCAAATTCCA | + |
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Preference number: 3 (lower is better) Translates to: AATLKHHSIKSTWGKKGRYEHSD*EIGQIP Trigger: TGGAATTTGACCTATTTCCAAGTCTGAATGCTCATA...TCTCCCTTTCTTCCCCCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR-3UTR CAA 90 bp | AGACAGCAGTGCAGGGGTATGGGAGAAATCAAGTCACTGAAAGGTTATGAGCATACAAGACAATTTAGGTaGGTTGGTTGGTTATCACAA | + |
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Preference number: 3 (lower is better) Translates to: RQQCRGMGEIKSLKGYEHTRQFR*VGWLSQ Trigger: TTGTGATAACCAACCAACCAACCTAAATTGTCTTGT...ATGCTCATAACCTTTCAGTGACTTGATTTCTCCCATACCCCTGCACTGCTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR TCA 72 bp | AACACCTCTTCCCTTTCCTCACCTCTCACAATGCAATaGACTTACTGCACAAAGCTTAAAGCTATGCCTTTA | + |
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Preference number: 3 (lower is better) Translates to: NTSSLSSPLTMQ*TYCTKLKAMPL Trigger: TAAAGGCATAGCTTTAAGCTTTGTGCAGTAAGTTCATTGCATTGTGAGAGGTGAGGAAAGGGAAGAGGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR GCA 72 bp | CTAAGACTAGAGCCCAGGTTTAGAGATGAAGTTTCTTaGAATAAGGTTGTCTTTGGTCAATCGGTCCATACT | + |
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Preference number: 3 (lower is better) Translates to: LRLEPRFRDEVS*NKVVFGQSVHT Trigger: AGTATGGACCGATTGACCAAAGACAACCTTATTGCAAGAAACTTCATCTCTAAACCTGGGCTCTAGTCTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR-3UTR CAA 90 bp | TTAGAGATGAAGTTTCTTGCAATAAGGTTGTCTTTGGTCAATCGGTCCATACTGCTGGGATGTAACTTGTaGCCACAAAGCATATCTCAC | + |
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Preference number: 3 (lower is better) Translates to: LEMKFLAIRLSLVNRSILLGCNL*PQSISH Trigger: GTGAGATATGCTTTGTGGCAACAAGTTACATCCCAG...CAGTATGGACCGATTGACCAAAGACAACCTTATTGCAAGAAACTTCATCTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR GCA 72 bp | CAATGCAATGAACTTACTGCACAAAGCTTAAAGCTATaGCTTTACATATGGCTAGCTAGTCAGCCAATTCCA | + |
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Preference number: 3 (lower is better) Translates to: QCNELTAQSLKL*LYIWLASQPIP Trigger: TGGAATTGGCTGACTAGCTAGCCATATGTAAAGGCATAGCTTTAAGCTTTGTGCAGTAAGTTCATTGCATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR GCA 72 bp | CTCAAGCTAACTAGAAAATTTCAAGTCTTTAACAATTaGCCAAACACCTCTTCCCTTTCCTCACCTCTCACA | + |
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Preference number: 3 (lower is better) Translates to: LKLTRKFQVFNN*PNTSSLSSPLT Trigger: TGTGAGAGGTGAGGAAAGGGAAGAGGTGTTTGGGCAATTGTTAAAGACTTGAAATTTTCTAGTTAGCTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | GCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGGGGAAGAAAGGGAGATCAGCAGGGGCAGGCTaGAGAGGTGCCCCATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: AATLKHHSIKSTWGKKGRSAGAG*RGAPLL Trigger: CAGCAATGGGGCACCTCTCCAGCCTGCCCCTGCTGA...TCTCCCTTTCTTCCCCCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | TTCAGCGTGCTGGGACCAAAGGCATGTATTACCTCAACTGTCTGGAAGCTGACATGCCTGGGCTCTGGCTaGAGGACAGGCATTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: FSVLGPKACITSTVWKLTCLGSG*RTGISH Trigger: GTGGGAAATGCCTGTCCTCCAGCCAGAGCCCAGGCA...TGTCAGCTTCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR TCA 90 bp | AAGCTCCAGGCCCAGGCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGAATTCCAGCATGTTATaGAGCCTCTGCAGCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: KLQAQAATLKHHSIKSTWNSSML*SLCSPL Trigger: CAGCGGGCTGCAGAGGCTTCATAACATGCTGGAATT...CCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGCCTGGGCCTGGAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | AGCGTGCTGGGACCAAAGGCATGTATTACCTCAACTGTCTGGAAGCTGACATTTATTGGCCCCACACTGTaGTCTGCAGGTGGAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SVLGPKACITSTVWKLTFIGPTL*SAGGGL Trigger: GAGACCTCCACCTGCAGACCACAGTGTGGGGCCAAT...AAATGTCAGCTTCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | AGCGTGCTGGGACCAAAGGCATGTATTACCTCAACTGTCTGGAAGCTGACATTTAGCGCTGAGATCCGGTaGTCCCCAGCATTGGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SVLGPKACITSTVWKLTFSAEIR*SPALVH Trigger: ATGGACCAATGCTGGGGACCACCGGATCTCAGCGCT...AAATGTCAGCTTCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | AAGCTCCAGGCCCAGGCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGAACCTCTTCATCCTCTaGAGAGCCATCGCTGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: KLQAQAATLKHHSIKSTWNLFIL*RAIAVR Trigger: TCTGACAGCGATGGCTCTGCAGAGGATGAAGAGGTT...CCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGCCTGGGCCTGGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | AAGCTCCAGGCCCAGGCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGGGCTTCAGGTTCTTCTaGCTGGACAACAACCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: KLQAQAATLKHHSIKSTWGFRFF*LDNNLF Trigger: GAAGAGGTTGTTGTCCAGGCAGAAGAACCTGAAGCC...CCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGCCTGGGCCTGGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR TCA 90 bp | AAGCTCCAGGCCCAGGCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGCTGTATATCACTTCATaGTCCATCTCTGAGGGGACC | + |
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Preference number: 4 (lower is better) Translates to: KLQAQAATLKHHSIKSTWLYITS*SISEGT Trigger: GGTCCCCTCAGAGATGGATCATGAAGTGATATACAG...CCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGCCTGGGCCTGGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR TCA 90 bp | AAGCTCCAGGCCCAGGCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGCTCCATATTTTCTTCTaGGGGCTGTACTTCCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: KLQAQAATLKHHSIKSTWLHIFF*GLYFLR Trigger: ACGGAGGAAGTACAGCCCTCAGAAGAAAATATGGAG...CCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGCCTGGGCCTGGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | AAGCTCCAGGCCCAGGCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGTATGTGGCACATACCTaGCATTGTCTTGCCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: KLQAQAATLKHHSIKSTWYVAHT*HCLASE Trigger: CTCAGAGGCAAGACAATGGCAGGTATGTGCCACATA...CCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGCCTGGGCCTGGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | GCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGGGGAAGAAAGGGAGACCCACCATAAGGAAATaGAGCCACTGCAGCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: AATLKHHSIKSTWGKKGRPTIRK*SHCSFG Trigger: CCCAAAGCTGCAGTGGCTGCATTTCCTTATGGTGGG...TCTCCCTTTCTTCCCCCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | TTCAGCGTGCTGGGACCAAAGGCATGTATTACCTCAACTGTCTGGAAGCTGACAAGCATGTTGGGCTTCTaGGGAGACTCTTTAGGGACT | + |
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Preference number: 4 (lower is better) Translates to: FSVLGPKACITSTVWKLTSMLGF*GDSLGT Trigger: AGTCCCTAAAGAGTCTCCCCAGAAGCCCAACATGCT...TGTCAGCTTCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | CAAAGAACATCTGAGAGAATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCCCAGCCTTCAGGTTCTaGAGCAACAAGCCACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: QRTSERIRHVAYALRQGVPAFRF*SNKPLP Trigger: TGGCAGTGGCTTGTTGCTGCAGAACCTGAAGGCTGG...GACACCTTGTCTCAAGGCATAGGCAACATGTCTGATTCTCTCAGATGTTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | AGACAGCAGTGCAGGGGTATGGGAGAAATCAAGTCACTGAAAGGTTATGAGCATACTGTGGTCTGCAGGTaGAGGTCTCAGCAATTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RQQCRGMGEIKSLKGYEHTVVCR*RSQQFQ Trigger: CTGGAATTGCTGAGACCTCCACCTGCAGACCACAGT...ATGCTCATAACCTTTCAGTGACTTGATTTCTCCCATACCCCTGCACTGCTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | AGCGTGCTGGGACCAAAGGCATGTATTACCTCAACTGTCTGGAAGCTGACATTTCTGACGGTGGATTCCTaGTCTCTGAATCATGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SVLGPKACITSTVWKLTFLTVDS*SLNHEQ Trigger: CTGCTCATGATTCAGAGACCAGGAATCCACCGTCAG...AAATGTCAGCTTCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | GCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGGGGAAGAAAGGGAGACTTAACACCAAAGCCTaGAAGAAAGGAGGCCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: AATLKHHSIKSTWGKKGRLNTKA*KKGGLR Trigger: CCTCAGGCCTCCTTTCTTCCAGGCTTTGGTGTTAAG...TCTCCCTTTCTTCCCCCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR TCA 90 bp | ATTCCACACAAGATATTAATGGTGCCCTTTATGCTTAGTGGAAGACTCTCTCCTCCATTGTCTTGCCTCTaGGACTCTCCAGCTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: IPHKILMVPFMLSGRLSPPLSCL*DSPALA Trigger: GGCCAGAGCTGGAGAGTCTCAGAGGCAAGACAATGG...AGGAGAGAGTCTTCCACTAAGCATAAAGGGCACCATTAATATCTTGTGTGGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | TTAGAGATGAAGTTTCTTGCAATAAGGTTGTCTTTGGTCAATCGGTCCATACTGGGCAGGCTGGAGAGGTaGCCCATTGCTGACGACTTC | + |
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Preference number: 4 (lower is better) Translates to: LEMKFLAIRLSLVNRSILGRLER*PIADDF Trigger: GAAGTCGTCAGCAATGGGGCACCTCTCCAGCCTGCC...CAGTATGGACCGATTGACCAAAGACAACCTTATTGCAAGAAACTTCATCTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | AGCGTGCTGGGACCAAAGGCATGTATTACCTCAACTGTCTGGAAGCTGACATTTGGTAAGGCTGAGACCTaGTTACCTGAAAGTAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: SVLGPKACITSTVWKLTFGKAET*LPESRH Trigger: ATGCCTACTTTCAGGTAAGCAGGTCTCAGCCTTACC...AAATGTCAGCTTCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | CAAAGAACATCTGAGAGAATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCCCTCCGTCAAATCAATaGATGCTGGTGGCAGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: QRTSERIRHVAYALRQGVPPSNQ*MLVAEA Trigger: AGCCTCTGCCACCAGCATCCATTGATTTGACGGAGG...GACACCTTGTCTCAAGGCATAGGCAACATGTCTGATTCTCTCAGATGTTCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | AGCGTGCTGGGACCAAAGGCATGTATTACCTCAACTGTCTGGAAGCTGACATTTGGTGGTCCCCAGCATTaGTCCATTGTTCCAAACATA | + |
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Preference number: 4 (lower is better) Translates to: SVLGPKACITSTVWKLTFGGPQH*SIVPNI Trigger: TATGTTTGGAACAATGGACCAATGCTGGGGACCACC...AAATGTCAGCTTCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | AGCGTGCTGGGACCAAAGGCATGTATTACCTCAACTGTCTGGAAGCTGACATTTCGATGTCACTGTGCTTaGCTTTCTTGTTGCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVLGPKACITSTVWKLTFRCHCA*LSCCTE Trigger: CTCAGTGCAACAAGAAAGCCAAGCACAGTGACATCG...AAATGTCAGCTTCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | CAAAGAACATCTGAGAGAATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCTATTTGCCTGGGCTCTaGCTGGAGGACAGGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRTSERIRHVAYALRQGVYLPGL*LEDRHF Trigger: GAAATGCCTGTCCTCCAGCCAGAGCCCAGGCAAATA...GACACCTTGTCTCAAGGCATAGGCAACATGTCTGATTCTCTCAGATGTTCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | GCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGGGGAAGAAAGGGAGAAGCTTCTTGGTCTGTTaGGATAACTCCTTGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AATLKHHSIKSTWGKKGRSFLVC*DNSLFW Trigger: CCAGAACAAGGAGTTATCGCAACAGACCAAGAAGCT...TCTCCCTTTCTTCCCCCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | AATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCTTAGGGGCAGTGGCTTAACAACGATGTCACTGTaGTTGGCTTTCTTGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NQTCCLCLETRCLRGSGLTTMSL*LAFLLH Trigger: GTGCAACAAGAAAGCCAAGCACAGTGACATCGTTGT...TAAGCCACTGCCCCTAAGACACCTTGTCTCAAGGCATAGGCAACATGTCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | AGCGTGCTGGGACCAAAGGCATGTATTACCTCAACTGTCTGGAAGCTGACATTTGACTCTAACTCAGCTTaGTTCCTGAGCATTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVLGPKACITSTVWKLTFDSNSA*FLSICS Trigger: TGAGCAAATGCTCAGGAAGCAAGCTGAGTTAGAGTC...AAATGTCAGCTTCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | CAAAGAACATCTGAGAGAATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCGACAGTGTCGGGTGCTaGTCTCTGTCTGAAAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QRTSERIRHVAYALRQGVDSVGC*SLSESL Trigger: TAGACTTTCAGACAGAGAGCAGCACCCGACACTGTC...GACACCTTGTCTCAAGGCATAGGCAACATGTCTGATTCTCTCAGATGTTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | GGTCAAATTCCACACAAGATATTAATGGTGCCCTTTATGCTTAGTGGAAGACTCGAGACTCTCCAGCTCTaGCCCTCAAAATGGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQIPHKILMVPFMLSGRLETLQL*PSKWVP Trigger: TGGCACCCATTTTGAGGGCCAGAGCTGGAGAGTCTC...GAGTCTTCCACTAAGCATAAAGGGCACCATTAATATCTTGTGTGGAATTTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | AGCGTGCTGGGACCAAAGGCATGTATTACCTCAACTGTCTGGAAGCTGACATTTCAGCCACTGCAGCTTTaGGTAAATATGACAGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: SVLGPKACITSTVWKLTFQPLQL*VNMTGI Trigger: TATCCCTGTCATATTTACCCAAAGCTGCAGTGGCTG...AAATGTCAGCTTCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | AGCGTGCTGGGACCAAAGGCATGTATTACCTCAACTGTCTGGAAGCTGACATTTGGAAGATGGCACTTTTaGTCAACAGTTTGCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVLGPKACITSTVWKLTFGRWHF*STVCKW Trigger: CCACTTGCAAACTGTTGACCAAAAGTGCCATCTTCC...AAATGTCAGCTTCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR TCA 90 bp | AGACAGCAGTGCAGGGGTATGGGAGAAATCAAGTCACTGAAAGGTTATGAGCATACTCAGCTTGCTTCCTaGGCATTTGCTCATTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RQQCRGMGEIKSLKGYEHTQLAS*AFAHSV Trigger: TACTGAATGAGCAAATGCTCAGGAAGCAAGCTGAGT...ATGCTCATAACCTTTCAGTGACTTGATTTCTCCCATACCCCTGCACTGCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR TCA 90 bp | AGCGTGCTGGGACCAAAGGCATGTATTACCTCAACTGTCTGGAAGCTGACATTTCTTTGGACTGACTGCTaGAAGATAATCCACGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SVLGPKACITSTVWKLTFLWTDC*KIIHES Trigger: AGATTCGTGGATTATCTTTCAGCAGTCAGTCCAAAG...AAATGTCAGCTTCCAGACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR TCA 90 bp | GGTCAAATTCCACACAAGATATTAATGGTGCCCTTTATGCTTAGTGGAAGACTCGTGCTGCTCTCTGTCTaGAAGTCTACAAAGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQIPHKILMVPFMLSGRLVLLSV*KSTKPP Trigger: AGGGGGCTTTGTAGACTTTCAGACAGAGAGCAGCAC...GAGTCTTCCACTAAGCATAAAGGGCACCATTAATATCTTGTGTGGAATTTGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | ATTCCACACAAGATATTAATGGTGCCCTTTATGCTTAGTGGAAGACTCTCTCCTGGCCCTCAAAATGGGTaGCATCCTCCTCCTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPHKILMVPFMLSGRLSPGPQNG*HPPPCS Trigger: AGAACAAGGAGGAGGATGGCACCCATTTTGAGGGCC...AGGAGAGAGTCTTCCACTAAGCATAAAGGGCACCATTAATATCTTGTGTGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | GGTCAAATTCCACACAAGATATTAATGGTGCCCTTTATGCTTAGTGGAAGACTCTTTCTGAGCTGTATTTaGCTGGGCTCTGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQIPHKILMVPFMLSGRLFLSCI*LGSGWR Trigger: CCTCCAGCCAGAGCCCAGGCAAATACAGCTCAGAAA...GAGTCTTCCACTAAGCATAAAGGGCACCATTAATATCTTGTGTGGAATTTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | AAGCTCCAGGCCCAGGCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGTACATACTAGGACATTaGCATTATTCTCTGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLQAQAATLKHHSIKSTWYILGH*HYSLGF Trigger: AAAGCCCAGAGAATAATGGCAATGTCCTAGTATGTA...CCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGCCTGGGCCTGGAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | AGACAGCAGTGCAGGGGTATGGGAGAAATCAAGTCACTGAAAGGTTATGAGCATTCAGAATTGAACCACTaGCTAGTCCAGCATAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: RQQCRGMGEIKSLKGYEHSELNH*LVQHRR Trigger: ACGTCTATGCTGGACTAGCCAGTGGTTCAATTCTGA...ATGCTCATAACCTTTCAGTGACTTGATTTCTCCCATACCCCTGCACTGCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | TTAGAGATGAAGTTTCTTGCAATAAGGTTGTCTTTGGTCAATCGGTCCATACTGGTCTACAAAGCCCCCTaGCTCCAAGGACAGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: LEMKFLAIRLSLVNRSILVYKAP*LQGQHM Trigger: CATGTGCTGTCCTTGGAGCCAGGGGGCTTTGTAGAC...CAGTATGGACCGATTGACCAAAGACAACCTTATTGCAAGAAACTTCATCTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | AGACAGCAGTGCAGGGGTATGGGAGAAATCAAGTCACTGAAAGGTTATGAGCATTCAACAGTTTGCAAGTaGGTCCCCCAAGGAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQQCRGMGEIKSLKGYEHSTVCK*VPQGMF Trigger: AAACATTCCTTGGGGGACCCACTTGCAAACTGTTGA...ATGCTCATAACCTTTCAGTGACTTGATTTCTCCCATACCCCTGCACTGCTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | AATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCTTAGGGGCAGTGGCTTATTATTCTCTGGGCTTTaGAAGATGGCACTTTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NQTCCLCLETRCLRGSGLLFSGL*KMALLV Trigger: GACCAAAAGTGCCATCTTCCAAAGCCCAGAGAATAA...TAAGCCACTGCCCCTAAGACACCTTGTCTCAAGGCATAGGCAACATGTCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | AATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCTTAGGGGCAGTGGCTTATCCCACTTGTACATATaGACAGTCTTCTCTGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NQTCCLCLETRCLRGSGLSHLYI*TVFSVK Trigger: CTTGACAGAGAAGACTGTCCATATGTACAAGTGGGA...TAAGCCACTGCCCCTAAGACACCTTGTCTCAAGGCATAGGCAACATGTCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR TCA 90 bp | ATTCCACACAAGATATTAATGGTGCCCTTTATGCTTAGTGGAAGACTCTCTCCTGGGATCGGGCATAAATaGCAACGATGTCACTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPHKILMVPFMLSGRLSPGIGHK*QRCHCA Trigger: AGCACAGTGACATCGTTGTCATTTATGCCCGATCCC...AGGAGAGAGTCTTCCACTAAGCATAAAGGGCACCATTAATATCTTGTGTGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR TCA 90 bp | ATTCCACACAAGATATTAATGGTGCCCTTTATGCTTAGTGGAAGACTCTCTCCTCAACAGTGTAGACTGTaGCGCTTCATCCCCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: IPHKILMVPFMLSGRLSPQQCRL*RFIPST Trigger: TGTACTGGGGATGAAGCGTCACAGTCTACACTGTTG...AGGAGAGAGTCTTCCACTAAGCATAAAGGGCACCATTAATATCTTGTGTGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | GGTCAAATTCCACACAAGATATTAATGGTGCCCTTTATGCTTAGTGGAAGACTCCAAGACAGTGTCGGGTaGTGCTCTCTGTCTGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GQIPHKILMVPFMLSGRLQDSVG*CSLSES Trigger: ACTTTCAGACAGAGAGCAGCACCCGACACTGTCTTG...GAGTCTTCCACTAAGCATAAAGGGCACCATTAATATCTTGTGTGGAATTTGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | TTAGAGATGAAGTTTCTTGCAATAAGGTTGTCTTTGGTCAATCGGTCCATACTGCCTCCTTGTTCTTATTaGCCCCACACTGTGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEMKFLAIRLSLVNRSILPPCSY*PHTVVC Trigger: GCAGACCACAGTGTGGGGCCAATAAGAACAAGGAGG...CAGTATGGACCGATTGACCAAAGACAACCTTATTGCAAGAAACTTCATCTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR CAA 72 bp | CCTTTATGCTTAGTGGAAGACTCTCTCCTGTATCTTTaGCATCCAAGAAGCAAGGCAGACCTTTCATGTACC | + |
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Preference number: 4 (lower is better) Translates to: PLCLVEDSLLYL*HPRSKADLSCT Trigger: GGTACATGAAAGGTCTGCCTTGCTTCTTGGATGCAAAAGATACAGGAGAGAGTCTTCCACTAAGCATAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR CAA 72 bp | CCCCACCCCAATCCAAATTTATTGTGGAAATGCAAATaGCCACGGCAAGGCTTGGTATTTAGCTTAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PHPNPNLLWKCK*PRQGLVFSLAS Trigger: AGAAGCTAAGCTAAATACCAAGCCTTGCCGTGGCAATTTGCATTTCCACAATAAATTTGGATTGGGGTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR TCA 90 bp | AGACAGCAGTGCAGGGGTATGGGAGAAATCAAGTCACTGAAAGGTTATGAGCATCTGAAGTTCCAGGATTaGCAACCTCCATATTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: RQQCRGMGEIKSLKGYEHLKFQD*QPPYFL Trigger: AAGAAAATATGGAGGTTGTCAATCCTGGAACTTCAG...ATGCTCATAACCTTTCAGTGACTTGATTTCTCCCATACCCCTGCACTGCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR GCA 90 bp | AATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCTTAGGGGCAGTGGCTTAGTTCCAAACATATTGTaGAAGTTTCACCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NQTCCLCLETRCLRGSGLVPNIL*KFHLPH Trigger: ATGAGGAAGGTGAAACTTGCACAATATGTTTGGAAC...TAAGCCACTGCCCCTAAGACACCTTGTCTCAAGGCATAGGCAACATGTCTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | TTAGAGATGAAGTTTCTTGCAATAAGGTTGTCTTTGGTCAATCGGTCCATACTGTCAGGTTCTTCTGCCTaGACAACAACCTCTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LEMKFLAIRLSLVNRSILSGSSA*TTTSSS Trigger: GGATGAAGAGGTTGTTGTCCAGGCAGAAGAACCTGA...CAGTATGGACCGATTGACCAAAGACAACCTTATTGCAAGAAACTTCATCTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | ATTCCACACAAGATATTAATGGTGCCCTTTATGCTTAGTGGAAGACTCTCTCCTCTTGTTCTGGAATGTTaGCTTCAGGTTCTTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IPHKILMVPFMLSGRLSPLVLEC*LQVLLP Trigger: AGGCAGAAGAACCTGAAGCCAACATTCCAGAACAAG...AGGAGAGAGTCTTCCACTAAGCATAAAGGGCACCATTAATATCTTGTGTGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | CAAAGAACATCTGAGAGAATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCAACTTTTCCAAGTCCTaGACACGGCTATTGAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QRTSERIRHVAYALRQGVNFSKS*TRLLSL Trigger: TAAACTCAATAGCCGTGTCCAGGACTTGGAAAAGTT...GACACCTTGTCTCAAGGCATAGGCAACATGTCTGATTCTCTCAGATGTTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| 3UTR CAA 72 bp | AATTTATTGTGGAAATGCAAATTGCCACGGCAAGGCTaGGTATTTAGCTTAGCTTCTGTGGTAGCAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: NLLWKCKLPRQG*VFSLASVVANP Trigger: GGGATTTGCTACCACAGAAGCTAAGCTAAATACCAAGCCTTGCCGTGGCAATTTGCATTTCCACAATAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR TCA 90 bp | GGTCAAATTCCACACAAGATATTAATGGTGCCCTTTATGCTTAGTGGAAGACTCGCTTTCTTGTTGCACTaGGGACATTTTCGTGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQIPHKILMVPFMLSGRLAFLLH*GHFRVC Trigger: ACAAACACGAAAATGTCCTCAGTGCAACAAGAAAGC...GAGTCTTCCACTAAGCATAAAGGGCACCATTAATATCTTGTGTGGAATTTGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR TCA 90 bp | TTAGAGATGAAGTTTCTTGCAATAAGGTTGTCTTTGGTCAATCGGTCCATACTGAGCAAGCCTTTGGACTaGCTGCTGAAAGATAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEMKFLAIRLSLVNRSILSKPLD*LLKDNP Trigger: TGGATTATCTTTCAGCAGTCAGTCCAAAGGCTTGCT...CAGTATGGACCGATTGACCAAAGACAACCTTATTGCAAGAAACTTCATCTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | TTAGAGATGAAGTTTCTTGCAATAAGGTTGTCTTTGGTCAATCGGTCCATACTGGATAACTCCTTGTTCTaGAATGTTGGCTTCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEMKFLAIRLSLVNRSILDNSLF*NVGFRF Trigger: GAACCTGAAGCCAACATTCCAGAACAAGGAGTTATC...CAGTATGGACCGATTGACCAAAGACAACCTTATTGCAAGAAACTTCATCTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CCA 90 bp | TTAGAGATGAAGTTTCTTGCAATAAGGTTGTCTTTGGTCAATCGGTCCATACTGATACCAGAGGACATCTaGCTTTCTGAGGAACTAATT | + |
|
Preference number: 4 (lower is better) Translates to: LEMKFLAIRLSLVNRSILIPEDI*LSEELI Trigger: AATTAGTTCCTCAGAAAGCCAGATGTCCTCTGGTAT...CAGTATGGACCGATTGACCAAAGACAACCTTATTGCAAGAAACTTCATCTCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS TCA 90 bp | ATGCTGGTGGCAGAGGCTGTAGAGTGGGCAGTCCATCTTGGCTGCTaGCCACTTCAGCAGGGGCAGGCTGAACATGTGCTCCACCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MLVAEAVEWAVHLGC*PLQQGQAEHVLHLG Trigger: GCCAAGGTGGAGCACATGTTCAGCCTGCCCCTGCTGAAGTGGTCAGCAGCCAAGATGGACTGCCCACTCTACAGCCTCTGCCACCAGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 90 bp | CTGCAGAGCCATCGCTGTCAGAGTCAGTGCCTGACGGTGGATTCCTaGTCTCTGAATCATGAGCAGCGGGTAGTGGGTAAGGCTGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: LQSHRCQSQCLTVDS*SLNHEQRVVGKAET Trigger: GGTCTCAGCCTTACCCACTACCCGCTGCTCATGATTCAGAGACCAGGAATCCACCGTCAGGCACTGACTCTGACAGCGATGGCTCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS GCA 90 bp | GGGTGCCATCCTCCTCCTTGTTCTTATTGGCCCCACACTGTGGTCTaGAGGTGGAGGTCTCAGCAATTCCAGCATGTTATGAAGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GCHPPPCSYWPHTVV*RWRSQQFQHVMKPL Trigger: CAGAGGCTTCATAACATGCTGGAATTGCTGAGACCTCCACCTGCAGACCACAGTGTGGGGCCAATAAGAACAAGGAGGAGGATGGCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS GCA 90 bp | ATTGTCTTGCCTCTGAGACTCTCCAGCTCTGGCCCTCAAAATGGGTaGCATCCTCCTCCTTGTTCTTATTGGCCCCACACTGTGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IVLPLRLSSSGPQNG*HPPPCSYWPHTVVC Trigger: GCAGACCACAGTGTGGGGCCAATAAGAACAAGGAGGAGGATGGCACCCATTTTGAGGGCCAGAGCTGGAGAGTCTCAGAGGCAAGACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 90 bp | CATCCTCCTCCTTGTTCTTATTGGCCCCACACTGTGGTCTGCAGGTaGAGGTCTCAGCAATTCCAGCATGTTATGAAGCCTCTGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HPPPCSYWPHTVVCR*RSQQFQHVMKPLQP Trigger: GGGCTGCAGAGGCTTCATAACATGCTGGAATTGCTGAGACCTCCACCTGCAGACCACAGTGTGGGGCCAATAAGAACAAGGAGGAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS TCA 90 bp | CAGCATGTTATGAAGCCTCTGCAGCCCGCTGATGAAGTTGTTCATTaGAACGGATCTAGCAGCTCCGGCGGTTGGGTTAGCACCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: QHVMKPLQPADEVVH*NGSSSSGGWVSTRS Trigger: GGATCTGGTGCTAACCCAACCGCCGGAGCTGCTAGATCCGTTTCAATGAACAACTTCATCAGCGGGCTGCAGAGGCTTCATAACATGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS GCA 90 bp | TCTGGCTGGAGGACAGGCATTTCCCACAAAGTGCTTTCGAGCGACTaGACTGCTGCGCAGCTGAGTTCTGATGCCGCACAACAAACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGWRTGISHKVLSSD*TAAQLSSDAAQQTF Trigger: AAAAGTTTGTTGTGCGGCATCAGAACTCAGCTGCGCAGCAGTGCAGTCGCTCGAAAGCACTTTGTGGGAAATGCCTGTCCTCCAGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS TCA 90 bp | GAAACGGATCTAGCAGCTCCGGCGGTTGGGTTAGCACCAGATCCCTaGCTAGGCTCCTCTGAAGTTCCAGGATTGACAACCTCCATATTT | + |
|
Preference number: 5 (lower is better) Translates to: ETDLAAPAVGLAPDP*LGSSEVPGLTTSIF Trigger: AAATATGGAGGTTGTCAATCCTGGAACTTCAGAGGAGCCTAGTCAGGGATCTGGTGCTAACCCAACCGCCGGAGCTGCTAGATCCGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS GCA 90 bp | TCAAATGGGCAGATGTCCAGGACAGGTTCACCAGCCTTCAGGTTCTaGAGCAACAAGCCACTGCCAGCATTCCACAACAGTGTAGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SNGQMSRTGSPAFRF*SNKPLPAFHNSVDC Trigger: ACAGTCTACACTGTTGTGGAATGCTGGCAGTGGCTTGTTGCTGCAGAACCTGAAGGCTGGTGAACCTGTCCTGGACATCTGCCCATTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 90 bp | CCTCCATATTTTCTTCTGAGGGCTGTACTTCCTCCGTCAAATCAATaGATGCTGGTGGCAGAGGCTGTAGAGTGGGCAGTCCATCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPYFLLRAVLPPSNQ*MLVAEAVEWAVHLG Trigger: GCCAAGATGGACTGCCCACTCTACAGCCTCTGCCACCAGCATCCATTGATTTGACGGAGGAAGTACAGCCCTCAGAAGAAAATATGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS TCA 90 bp | CAAGATTCGGCATTTTCCCGTCTGAGATATGGTGAAGGTCTTTTCTaGGCTGTATTTGCCTGGGCTCTGGCTGGAGGACAGGCATTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QDSAFSRLRYGEGLF*AVFAWALAGGQAFP Trigger: GGGAAATGCCTGTCCTCCAGCCAGAGCCCAGGCAAATACAGCTCAGAAAAGACCTTCACCATATCTCAGACGGGAAAATGCCGAATCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS GCA 90 bp | GTTTGTCCTTTGAGCCATTTAGAAATGCATCTAAATCCAAAGAGGTaGCCACAGCGTAGCGCTGAGATCCGGTGGTCCCCAGCATTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VCPLSHLEMHLNPKR*PQRSAEIRWSPALV Trigger: GACCAATGCTGGGGACCACCGGATCTCAGCGCTACGCTGTGGGCACCTCTTTGGATTTAGATGCATTTCTAAATGGCTCAAAGGACAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 90 bp | TTCCAGCCAGCACCCCACCATAAGGAAATGCAGCCACTGCAGCTTTaGGTAAATATGACAGGGATACCAGAGGACATCTGGCTTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FQPAPHHKEMQPLQL*VNMTGIPEDIWLSE Trigger: CTCAGAAAGCCAGATGTCCTCTGGTATCCCTGTCATATTTACCCAAAGCTGCAGTGGCTGCATTTCCTTATGGTGGGGTGCTGGCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS CCA 90 bp | CTTCTCTGTCAAGGTGGCCAGATAGCTGTTCTGATTCGTTTCAAATaGGCAGATGTCCAGGACAGGTTCACCAGCCTTCAGGTTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLCQGGQIAVLIRFK*ADVQDRFTSLQVLQ Trigger: CTGCAGAACCTGAAGGCTGGTGAACCTGTCCTGGACATCTGCCCATTTGAAACGAATCAGAACAGCTATCTGGCCACCTTGACAGAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS-3UTR CAA 90 bp | CAAAGAACATCTGAGAGAATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCGCTCCACCTTGGCTATaGGCCAGTTCAGCAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QRTSERIRHVAYALRQGVAPPWL*ASSAGA Trigger: TGCCCCTGCTGAACTGGCCAATAGCCAAGGTGGAGC...GACACCTTGTCTCAAGGCATAGGCAACATGTCTGATTCTCTCAGATGTTCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS-3UTR CAA 90 bp | AAGCTCCAGGCCCAGGCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGCCTTGTTCTGGAATGTaGGCTTCAGGTTCTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KLQAQAATLKHHSIKSTWPCSGM*ASGSSA Trigger: GGCAGAAGAACCTGAAGCCAACATTCCAGAACAAGG...CCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGCCTGGGCCTGGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS TCA 90 bp | ACACTGTGGTCTGCAGGTGGAGGTCTCAGCAATTCCAGCATGTTATaGAGCCTCTGCAGCCCGCTGATGAAGTTGTTCATTGAAACGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TLWSAGGGLSNSSML*SLCSPLMKLFIETD Trigger: ATCCGTTTCAATGAACAACTTCATCAGCGGGCTGCAGAGGCTTCATAACATGCTGGAATTGCTGAGACCTCCACCTGCAGACCACAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS TCA 90 bp | TCCTGGACACGGCTATTGAGTTTAGTGCACTTATCAATAAGGACCTaGAGCTGGAGCCGGCACTGTGCAGACTCTAACTCAGCTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SWTRLLSLVHLSIRT*SWSRHCADSNSACF Trigger: GAAGCAAGCTGAGTTAGAGTCTGCACAGTGCCGGCTCCAGCTTCAGGTCCTTATTGATAAGTGCACTAAACTCAATAGCCGTGTCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS TCA 90 bp | CATCACAATAGGCCAAGATTCGGCATTTTCCCGTCTGAGATATGGTaGAGGTCTTTTCTGAGCTGTATTTGCCTGGGCTCTGGCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HHNRPRFGIFPSEIW*RSFLSCICLGSGWR Trigger: CCTCCAGCCAGAGCCCAGGCAAATACAGCTCAGAAAAGACCTTCACCATATCTCAGACGGGAAAATGCCGAATCTTGGCCTATTGTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS GCA 90 bp | TGGTCTCTGAATCATGAGCAGCGGGTAGTGGGTAAGGCTGAGACCTaGTTACCTGAAAGTAGGCATATAGTGGTGTATGTGGCACATACC | + |
|
Preference number: 5 (lower is better) Translates to: WSLNHEQRVVGKAET*LPESRHIVVYVAHT Trigger: GGTATGTGCCACATACACCACTATATGCCTACTTTCAGGTAAGCAGGTCTCAGCCTTACCCACTACCCGCTGCTCATGATTCAGAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS GCA 90 bp | TATGGCTTTTATCAGGTCTGTAAGTCACAAGACAGTGTCGGGTGCTaGTCTCTGTCTGAAAGTCTACAAAGCCCCCTGGCTCCAAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: YGFYQVCKSQDSVGC*SLSESLQSPLAPRT Trigger: TGTCCTTGGAGCCAGGGGGCTTTGTAGACTTTCAGACAGAGAGCAGCACCCGACACTGTCTTGTGACTTACAGACCTGATAAAAGCCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS GCA 90 bp | TGTTATGGCTTTTATCAGGTCTGTAAGTCACAAGACAGTGTCGGGTaGTGCTCTCTGTCTGAAAGTCTACAAAGCCCCCTGGCTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CYGFYQVCKSQDSVG*CSLSESLQSPLAPR Trigger: CCTTGGAGCCAGGGGGCTTTGTAGACTTTCAGACAGAGAGCAGCACCCGACACTGTCTTGTGACTTACAGACCTGATAAAAGCCATAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS CCA 90 bp | CATCTAAATCCAAAGAGGTGCCCACAGCGTAGCGCTGAGATCCGGTaGTCCCCAGCATTGGTCCATTGTTCCAAACATATTGTGCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HLNPKRCPQRSAEIR*SPALVHCSKHIVQV Trigger: AACTTGCACAATATGTTTGGAACAATGGACCAATGCTGGGGACCACCGGATCTCAGCGCTACGCTGTGGGCACCTCTTTGGATTTAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS-3UTR CAA 90 bp | AAGCTCCAGGCCCAGGCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGAGTCATAGATCAGAATaGAACCACTGGCTAGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KLQAQAATLKHHSIKSTWSHRSE*NHWLVQ Trigger: CTGGACTAGCCAGTGGTTCAATTCTGATCTATGACT...CCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGCCTGGGCCTGGAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS CCA 90 bp | GTTTCACCTTCCTCATCTTCCATAGCAGATAGCATGTTGGGCTTCTaGGGAGACTCTTTAGGGACTGCATCATCTCCTGTGACAGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: VSPSSSSIADSMLGF*GDSLGTASSPVTDV Trigger: TACATCTGTCACAGGAGATGATGCAGTCCCTAAAGAGTCTCCCCAGAAGCCCAACATGCTATCTGCTATGGAAGATGAGGAAGGTGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS-3UTR CAA 90 bp | CAAAGAACATCTGAGAGAATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCTCCTCCTTGTTCTTATaGGCCCCACACTGTGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRTSERIRHVAYALRQGVSSLFL*APHCGL Trigger: CAGACCACAGTGTGGGGCCAATAAGAACAAGGAGGA...GACACCTTGTCTCAAGGCATAGGCAACATGTCTGATTCTCTCAGATGTTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS-3UTR CAA 90 bp | CAAAGAACATCTGAGAGAATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCCGGTGGTCCCCAGCATaGGTCCATTGTTCCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: QRTSERIRHVAYALRQGVRWSPA*VHCSKH Trigger: ATGTTTGGAACAATGGACCAATGCTGGGGACCACCG...GACACCTTGTCTCAAGGCATAGGCAACATGTCTGATTCTCTCAGATGTTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS-3UTR CAA 90 bp | AAGCTCCAGGCCCAGGCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGATTATTCTCTGGGCTTaGGAAGATGGCACTTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KLQAQAATLKHHSIKSTWIILWA*EDGTFG Trigger: ACCAAAAGTGCCATCTTCCAAAGCCCAGAGAATAAT...CCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGCCTGGGCCTGGAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS TCA 90 bp | TTAATAGTGCAGTCAAGGGAGGCAGACAGGAGCAAGCCTTTGGACTaGCTGCTGAAAGATAATCCACGAATCTGCTTGTTGTGCATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LIVQSREADRSKPLD*LLKDNPRICLLCIG Trigger: TCCTATGCACAACAAGCAGATTCGTGGATTATCTTTCAGCAGTCAGTCCAAAGGCTTGCTCCTGTCTGCCTCCCTTGACTGCACTATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS CCA 90 bp | CTAGGACATTGCCATTATTCTCTGGGCTTTGGAAGATGGCACTTTTaGTCAACAGTTTGCAAGTGGGTCCCCCAAGGAATGTTTGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: LGHCHYSLGFGRWHF*STVCKWVPQGMFVQ Trigger: CTGTACAAACATTCCTTGGGGGACCCACTTGCAAACTGTTGACCAAAAGTGCCATCTTCCAAAGCCCAGAGAATAATGGCAATGTCCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS-3UTR CAA 90 bp | AATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCTTAGGGGCAGTGGCTTAAGCCCGCTGATGAAGTaGTTCATTGAAACGGATCTA | + |
|
Preference number: 5 (lower is better) Translates to: NQTCCLCLETRCLRGSGLSPLMK*FIETDL Trigger: TAGATCCGTTTCAATGAACAACTTCATCAGCGGGCT...TAAGCCACTGCCCCTAAGACACCTTGTCTCAAGGCATAGGCAACATGTCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS-3UTR CAA 90 bp | ATTCCACACAAGATATTAATGGTGCCCTTTATGCTTAGTGGAAGACTCTCTCCTGTGCCATCCTCCTCCTaGTTCTTATTGGCCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: IPHKILMVPFMLSGRLSPVPSSS*FLLAPH Trigger: GTGTGGGGCCAATAAGAACAAGGAGGAGGATGGCAC...AGGAGAGAGTCTTCCACTAAGCATAAAGGGCACCATTAATATCTTGTGTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CAA 90 bp | GCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGGGGAAGAAAGGGAGATCCTGGACACGGCTATaGAGTTTAGTGCACTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: AATLKHHSIKSTWGKKGRSWTRL*SLVHLS Trigger: TGATAAGTGCACTAAACTCAATAGCCGTGTCCAGGA...TCTCCCTTTCTTCCCCCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS-3UTR CAA 90 bp | ATTCCACACAAGATATTAATGGTGCCCTTTATGCTTAGTGGAAGACTCTCTCCTAACATGTGCTCCACCTaGGCTATTGGCCAGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IPHKILMVPFMLSGRLSPNMCST*AIGQFS Trigger: GCTGAACTGGCCAATAGCCAAGGTGGAGCACATGTT...AGGAGAGAGTCTTCCACTAAGCATAAAGGGCACCATTAATATCTTGTGTGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CAA 90 bp | ATTCCACACAAGATATTAATGGTGCCCTTTATGCTTAGTGGAAGACTCTCTCCTATACCTGCCATTGTCTaGCCTCTGAGACTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IPHKILMVPFMLSGRLSPIPAIV*PLRLSS Trigger: GCTGGAGAGTCTCAGAGGCAAGACAATGGCAGGTAT...AGGAGAGAGTCTTCCACTAAGCATAAAGGGCACCATTAATATCTTGTGTGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CAA 90 bp | AGACAGCAGTGCAGGGGTATGGGAGAAATCAAGTCACTGAAAGGTTATGAGCATCCCAGCATTGGTCCATaGTTCCAAACATATTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RQQCRGMGEIKSLKGYEHPSIGP*FQTYCA Trigger: TGCACAATATGTTTGGAACAATGGACCAATGCTGGG...ATGCTCATAACCTTTCAGTGACTTGATTTCTCCCATACCCCTGCACTGCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CAA 90 bp | CAAAGAACATCTGAGAGAATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCTCTGCACCACAGTATTaGTTTCTAGGCTGGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QRTSERIRHVAYALRQGVSAPQY*FLGWSA Trigger: AGCTGACCAGCCTAGAAACAAATACTGTGGTGCAGA...GACACCTTGTCTCAAGGCATAGGCAACATGTCTGATTCTCTCAGATGTTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CAA 90 bp | AATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCTTAGGGGCAGTGGCTTAGTACATACTAGGACATaGCCATTATTCTCTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NQTCCLCLETRCLRGSGLVHTRT*PLFSGL Trigger: AAGCCCAGAGAATAATGGCAATGTCCTAGTATGTAC...TAAGCCACTGCCCCTAAGACACCTTGTCTCAAGGCATAGGCAACATGTCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CAA 90 bp | GCAGCTACTCTTAAGCATCACTCTATCAAAAGCACCTGGGGGAAGAAAGGGAGATCTGAAGTTCCAGGATaGACAACCTCCATATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AATLKHHSIKSTWGKKGRSEVPG*TTSIFS Trigger: AGAAAATATGGAGGTTGTCAATCCTGGAACTTCAGA...TCTCCCTTTCTTCCCCCAGGTGCTTTTGATAGAGTGATGCTTAAGAGTAGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CAA 90 bp | ATTCCACACAAGATATTAATGGTGCCCTTTATGCTTAGTGGAAGACTCTCTCCTGCAGCCACTGCAGCTTaGGGTAAATATGACAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: IPHKILMVPFMLSGRLSPAATAA*GKYDRD Trigger: ATCCCTGTCATATTTACCCAAAGCTGCAGTGGCTGC...AGGAGAGAGTCTTCCACTAAGCATAAAGGGCACCATTAATATCTTGTGTGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CAA 90 bp | TTAGAGATGAAGTTTCTTGCAATAAGGTTGTCTTTGGTCAATCGGTCCATACTGATAGCAGATAGCATGTaGGGCTTCTGGGGAGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEMKFLAIRLSLVNRSILIADSM*GFWGDS Trigger: AGAGTCTCCCCAGAAGCCCAACATGCTATCTGCTAT...CAGTATGGACCGATTGACCAAAGACAACCTTATTGCAAGAAACTTCATCTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 90 bp | TATAGGTGTTTGTGTTCCGTAAGTCATAGATCAGAATTGAACCACTaGCTAGTCCAGCATAGACGTAATTGTTTTCGTCAAGACACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YRCLCSVSHRSELNH*LVQHRRNCFRQDTS Trigger: GCTGGTGTCTTGACGAAAACAATTACGTCTATGCTGGACTAGCCAGTGGTTCAATTCTGATCTATGACTTACGGAACACAAACACCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS-3UTR CAA 90 bp | AGACAGCAGTGCAGGGGTATGGGAGAAATCAAGTCACTGAAAGGTTATGAGCATTTTCGTGTTTGTCCTTaGAGCCATTTAGAAATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RQQCRGMGEIKSLKGYEHFRVCP*SHLEMH Trigger: ATGCATTTCTAAATGGCTCAAAGGACAAACACGAAA...ATGCTCATAACCTTTCAGTGACTTGATTTCTCCCATACCCCTGCACTGCTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS-3UTR CAA 90 bp | TTAGAGATGAAGTTTCTTGCAATAAGGTTGTCTTTGGTCAATCGGTCCATACTGTGTTGCGATAACTCCTaGTTCTGGAATGTTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LEMKFLAIRLSLVNRSILCCDNS*FWNVGF Trigger: GAAGCCAACATTCCAGAACAAGGAGTTATCGCAACA...CAGTATGGACCGATTGACCAAAGACAACCTTATTGCAAGAAACTTCATCTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS-3UTR CAA 90 bp | CAAAGAACATCTGAGAGAATCAGACATGTTGCCTATGCCTTGAGACAAGGTGTCATTGTTCCAAACATATaGTGCAAGTTTCACCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QRTSERIRHVAYALRQGVIVPNI*CKFHLP Trigger: AGGAAGGTGAAACTTGCACAATATGTTTGGAACAAT...GACACCTTGTCTCAAGGCATAGGCAACATGTCTGATTCTCTCAGATGTTCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS-3UTR CAA 90 bp | TTAGAGATGAAGTTTCTTGCAATAAGGTTGTCTTTGGTCAATCGGTCCATACTGTGGAAGATGGCACTTTaGGTCAACAGTTTGCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LEMKFLAIRLSLVNRSILWKMAL*VNSLQV Trigger: CACTTGCAAACTGTTGACCAAAAGTGCCATCTTCCA...CAGTATGGACCGATTGACCAAAGACAACCTTATTGCAAGAAACTTCATCTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS TCA 90 bp | CTGAAAGATAATCCACGAATCTGCTTGTTGTGCATAGGAATATACTaGCTGCTCTTCATGTTGGCAGTACTCAACATCTTAACACCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKDNPRICLLCIGIY*LLFMLAVLNILTPK Trigger: CTTTGGTGTTAAGATGTTGAGTACTGCCAACATGAAGAGCAGTCAGTATATTCCTATGCACAACAAGCAGATTCGTGGATTATCTTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 72 bp | CAGGGGCAGGCTGAACATGTGCTCCACCTTGGCTATTaGCCAGTTCAGCAGGGGCAGGCTGGAGAGGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QGQAEHVLHLGY*PVQQGQAGEVP Trigger: GGGCACCTCTCCAGCCTGCCCCTGCTGAACTGGCCAATAGCCAAGGTGGAGCACATGTTCAGCCTGCCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS TCA 72 bp | GCAGAGGCTGTAGAGTGGGCAGTCCATCTTGGCTGCTaGCCACTTCAGCAGGGGCAGGCTGAACATGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AEAVEWAVHLGC*PLQQGQAEHVL Trigger: GAGCACATGTTCAGCCTGCCCCTGCTGAAGTGGTCAGCAGCCAAGATGGACTGCCCACTCTACAGCCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS CCA 72 bp | CCACCTTGGCTATTGGCCAGTTCAGCAGGGGCAGGCTaGAGAGGTGCCCCATTGCTGACGACTTCAGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PPWLLASSAGAG*RGAPLLTTSVG Trigger: TCCAACTGAAGTCGTCAGCAATGGGGCACCTCTCCAGCCTGCCCCTGCTGAACTGGCCAATAGCCAAGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS CAA 72 bp | GCCAGTTCAGCAGGGGCAGGCTGGAGAGGTGCCCCATaGCTGACGACTTCAGTTGGAGTAGCTGGTTCTATA | + |
|
Preference number: 6 (lower is better) Translates to: ASSAGAGWRGAP*LTTSVGVAGSI Trigger: TATAGAACCAGCTACTCCAACTGAAGTCGTCAGCAATGGGGCACCTCTCCAGCCTGCCCCTGCTGAACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS CAA 72 bp | CAGCTCTGGCCCTCAAAATGGGTGCCATCCTCCTCCTaGTTCTTATTGGCCCCACACTGTGGTCTGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QLWPSKWVPSSS*FLLAPHCGLQV Trigger: CACCTGCAGACCACAGTGTGGGGCCAATAAGAACAAGGAGGAGGATGGCACCCATTTTGAGGGCCAGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS TCA 72 bp | CTGAAGATGACTGTATATCACTTCATGATCCATCTCTaGGGGGACCAAGTCGGACGCCTGGCCGACCGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: LKMTVYHFMIHL*GDQVGRLADRD Trigger: GTCGCGGTCGGCCAGGCGTCCGACTTGGTCCCCTCAGAGATGGATCATGAAGTGATATACAGTCATCTTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS TCA 72 bp | GGTGTATGTGGCACATACCTGCCATTGTCTTGCCTCTaGGACTCTCCAGCTCTGGCCCTCAAAATGGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GVCGTYLPLSCL*DSPALALKMGA Trigger: GGCACCCATTTTGAGGGCCAGAGCTGGAGAGTCTCAGAGGCAAGACAATGGCAGGTATGTGCCACATACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS GCA 72 bp | CCTCTGAGACTCTCCAGCTCTGGCCCTCAAAATGGGTaGCATCCTCCTCCTTGTTCTTATTGGCCCCACACT | + |
|
Preference number: 6 (lower is better) Translates to: PLRLSSSGPQNG*HPPPCSYWPHT Trigger: AGTGTGGGGCCAATAAGAACAAGGAGGAGGATGGCACCCATTTTGAGGGCCAGAGCTGGAGAGTCTCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS CCA 72 bp | GCCATCCTCCTCCTTGTTCTTATTGGCCCCACACTGTaGTCTGCAGGTGGAGGTCTCAGCAATTCCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: AILLLVLIGPTL*SAGGGLSNSSM Trigger: CATGCTGGAATTGCTGAGACCTCCACCTGCAGACCACAGTGTGGGGCCAATAAGAACAAGGAGGAGGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS CCA 72 bp | CCTCAAAATGGGTGCCATCCTCCTCCTTGTTCTTATTaGCCCCACACTGTGGTCTGCAGGTGGAGGTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PQNGCHPPPCSY*PHTVVCRWRSQ Trigger: CTGAGACCTCCACCTGCAGACCACAGTGTGGGGCCAATAAGAACAAGGAGGAGGATGGCACCCATTTTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
||
| CDS CCA 72 bp | CTTGCCTCTGAGACTCTCCAGCTCTGGCCCTCAAAATaGGTGCCATCCTCCTCCTTGTTCTTATTGGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LASETLQLWPSK*VPSSSLFLLAP Trigger: TGGGGCCAATAAGAACAAGGAGGAGGATGGCACCCATTTTGAGGGCCAGAGCTGGAGAGTCTCAGAGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 72 bp | CATCGCTGTCAGAGTCAGTGCCTGACGGTGGATTCCTaGTCTCTGAATCATGAGCAGCGGGTAGTGGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: HRCQSQCLTVDS*SLNHEQRVVGK Trigger: CTTACCCACTACCCGCTGCTCATGATTCAGAGACCAGGAATCCACCGTCAGGCACTGACTCTGACAGCGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CAA 72 bp | CCCTCAAAATGGGTGCCATCCTCCTCCTTGTTCTTATaGGCCCCACACTGTGGTCTGCAGGTGGAGGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: PSKWVPSSSLFL*APHCGLQVEVS Trigger: TGAGACCTCCACCTGCAGACCACAGTGTGGGGCCAATAAGAACAAGGAGGAGGATGGCACCCATTTTGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS TCA 72 bp | ATGAAGCCTCTGCAGCCCGCTGATGAAGTTGTTCATTaGAACGGATCTAGCAGCTCCGGCGGTTGGGTTAGC | + |
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Preference number: 6 (lower is better) Translates to: MKPLQPADEVVH*NGSSSSGGWVS Trigger: GCTAACCCAACCGCCGGAGCTGCTAGATCCGTTTCAATGAACAACTTCATCAGCGGGCTGCAGAGGCTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS TCA 72 bp | GCTTTCGAGCGACTGCACTGCTGCGCAGCTGAGTTCTaGTGCCGCACAACAAACTTTTCCAAGTCCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: AFERLHCCAAEF*CRTTNFSKSWT Trigger: TGTCCAGGACTTGGAAAAGTTTGTTGTGCGGCATCAGAACTCAGCTGCGCAGCAGTGCAGTCGCTCGAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS GCA 72 bp | CTTCATCCTCTGCAGAGCCATCGCTGTCAGAGTCAGTaGCTGACGGTGGATTCCTGGTCTCTGAATCATGAG | + |
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Preference number: 6 (lower is better) Translates to: LHPLQSHRCQSQ*LTVDSWSLNHE Trigger: CTCATGATTCAGAGACCAGGAATCCACCGTCAGGCACTGACTCTGACAGCGATGGCTCTGCAGAGGATGAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 72 bp | CCAAAGAGGTGCCCACAGCGTAGCGCTGAGATCCGGTaGTCCCCAGCATTGGTCCATTGTTCCAAACATATT | + |
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Preference number: 6 (lower is better) Translates to: PKRCPQRSAEIR*SPALVHCSKHI Trigger: AATATGTTTGGAACAATGGACCAATGCTGGGGACCACCGGATCTCAGCGCTACGCTGTGGGCACCTCTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CAA 72 bp | GGTCAACAGTTTGCAAGTGGGTCCCCCAAGGAATGTTaGTACAGGAAGACAGGAACAGACCGGCTCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GQQFASGSPKEC*YRKTGTDRLSS Trigger: GCTGGAGAGCCGGTCTGTTCCTGTCTTCCTGTACAAACATTCCTTGGGGGACCCACTTGCAAACTGTTGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CAA 90 bp | GGCACTTTTGGTCAACAGTTTGCAAGTGGGTCCCCCAAGGAATGTTaGTACAGGAAGACAGGAACAGACCGGCTCTCCAGCATCGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GTFGQQFASGSPKEC*YRKTGTDRLSSIVQ Trigger: CTGGACGATGCTGGAGAGCCGGTCTGTTCCTGTCTTCCTGTACAAACATTCCTTGGGGGACCCACTTGCAAACTGTTGACCAAAAGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS GCA 72 bp | CCTCCTCCTTGTTCTTATTGGCCCCACACTGTGGTCTaGAGGTGGAGGTCTCAGCAATTCCAGCATGTTATG | + |
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Preference number: 6 (lower is better) Translates to: PPPCSYWPHTVV*RWRSQQFQHVM Trigger: CATAACATGCTGGAATTGCTGAGACCTCCACCTGCAGACCACAGTGTGGGGCCAATAAGAACAAGGAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 72 bp | AGGTCTTTTCTGAGCTGTATTTGCCTGGGCTCTGGCTaGAGGACAGGCATTTCCCACAAAGTGCTTTCGAGC | + |
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Preference number: 6 (lower is better) Translates to: RSFLSCICLGSG*RTGISHKVLSS Trigger: GCTCGAAAGCACTTTGTGGGAAATGCCTGTCCTCCAGCCAGAGCCCAGGCAAATACAGCTCAGAAAAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CAA 90 bp | AAGAGGTGCCCACAGCGTAGCGCTGAGATCCGGTGGTCCCCAGCATaGGTCCATTGTTCCAAACATATTGTGCAAGTTTCACCTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: KRCPQRSAEIRWSPA*VHCSKHIVQVSPSS Trigger: TGAGGAAGGTGAAACTTGCACAATATGTTTGGAACAATGGACCAATGCTGGGGACCACCGGATCTCAGCGCTACGCTGTGGGCACCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS GCA 72 bp | TTGAGCCATTTAGAAATGCATCTAAATCCAAAGAGGTaGCCACAGCGTAGCGCTGAGATCCGGTGGTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: LSHLEMHLNPKR*PQRSAEIRWSP Trigger: TGGGGACCACCGGATCTCAGCGCTACGCTGTGGGCACCTCTTTGGATTTAGATGCATTTCTAAATGGCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 72 bp | GCACCCCACCATAAGGAAATGCAGCCACTGCAGCTTTaGGTAAATATGACAGGGATACCAGAGGACATCTGG | + |
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Preference number: 6 (lower is better) Translates to: APHHKEMQPLQL*VNMTGIPEDIW Trigger: CCAGATGTCCTCTGGTATCCCTGTCATATTTACCCAAAGCTGCAGTGGCTGCATTTCCTTATGGTGGGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 72 bp | GGTGCTGCTCTCTGTCTGAAAGTCTACAAAGCCCCCTaGCTCCAAGGACAGCACATGAGGCTTATGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: GAALCLKVYKAP*LQGQHMRLMRK Trigger: TTTTCTCATAAGCCTCATGTGCTGTCCTTGGAGCCAGGGGGCTTTGTAGACTTTCAGACAGAGAGCAGCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 72 bp | CAAGGTGGCCAGATAGCTGTTCTGATTCGTTTCAAATaGGCAGATGTCCAGGACAGGTTCACCAGCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: QGGQIAVLIRFK*ADVQDRFTSLQ Trigger: CTGAAGGCTGGTGAACCTGTCCTGGACATCTGCCCATTTGAAACGAATCAGAACAGCTATCTGGCCACCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CAA 72 bp | CCACAGCGTAGCGCTGAGATCCGGTGGTCCCCAGCATaGGTCCATTGTTCCAAACATATTGTGCAAGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: PQRSAEIRWSPA*VHCSKHIVQVS Trigger: TGAAACTTGCACAATATGTTTGGAACAATGGACCAATGCTGGGGACCACCGGATCTCAGCGCTACGCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS TCA 72 bp | TCTGCAGGTGGAGGTCTCAGCAATTCCAGCATGTTATaGAGCCTCTGCAGCCCGCTGATGAAGTTGTTCATT | + |
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Preference number: 6 (lower is better) Translates to: SAGGGLSNSSML*SLCSPLMKLFI Trigger: AATGAACAACTTCATCAGCGGGCTGCAGAGGCTTCATAACATGCTGGAATTGCTGAGACCTCCACCTGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS TCA 72 bp | CAGTCAAGGGAGGCAGACAGGAGCAAGCCTTTGGACTaGCTGCTGAAAGATAATCCACGAATCTGCTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: QSREADRSKPLD*LLKDNPRICLL Trigger: CAACAAGCAGATTCGTGGATTATCTTTCAGCAGTCAGTCCAAAGGCTTGCTCCTGTCTGCCTCCCTTGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS GCA 72 bp | GAAAGTAGGCATATAGTGGTGTATGTGGCACATACCTaGCATTGTCTTGCCTCTGAGACTCTCCAGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ESRHIVVYVAHT*HCLASETLQLW Trigger: CCAGAGCTGGAGAGTCTCAGAGGCAAGACAATGGCAGGTATGTGCCACATACACCACTATATGCCTACTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 72 bp | TCCTCATCTTCCATAGCAGATAGCATGTTGGGCTTCTaGGGAGACTCTTTAGGGACTGCATCATCTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSSSIADSMLGF*GDSLGTASSPV Trigger: CACAGGAGATGATGCAGTCCCTAAAGAGTCTCCCCAGAAGCCCAACATGCTATCTGCTATGGAAGATGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS TCA 72 bp | GGTTGGGTTAGCACCAGATCCCTGACTAGGCTCCTCTaGAGTTCCAGGATTGACAACCTCCATATTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GWVSTRSLTRLL*SSRIDNLHIFF Trigger: GAAGAAAATATGGAGGTTGTCAATCCTGGAACTTCAGAGGAGCCTAGTCAGGGATCTGGTGCTAACCCAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS TCA 72 bp | CGGCTATTGAGTTTAGTGCACTTATCAATAAGGACCTaGAGCTGGAGCCGGCACTGTGCAGACTCTAACTCA | + |
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Preference number: 6 (lower is better) Translates to: RLLSLVHLSIRT*SWSRHCADSNS Trigger: TGAGTTAGAGTCTGCACAGTGCCGGCTCCAGCTTCAGGTCCTTATTGATAAGTGCACTAAACTCAATAGCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS TCA 72 bp | AGGCCAAGATTCGGCATTTTCCCGTCTGAGATATGGTaGAGGTCTTTTCTGAGCTGTATTTGCCTGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RPRFGIFPSEIW*RSFLSCICLGS Trigger: AGAGCCCAGGCAAATACAGCTCAGAAAAGACCTTCACCATATCTCAGACGGGAAAATGCCGAATCTTGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CAA 72 bp | TCTGGGCTTTGGAAGATGGCACTTTTGGTCAACAGTTaGCAAGTGGGTCCCCCAAGGAATGTTTGTACAGGA | + |
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Preference number: 6 (lower is better) Translates to: SGLWKMALLVNS*QVGPPRNVCTG Trigger: TCCTGTACAAACATTCCTTGGGGGACCCACTTGCAAACTGTTGACCAAAAGTGCCATCTTCCAAAGCCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CAA 90 bp | CCATTATTCTCTGGGCTTTGGAAGATGGCACTTTTGGTCAACAGTTaGCAAGTGGGTCCCCCAAGGAATGTTTGTACAGGAAGACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PLFSGLWKMALLVNS*QVGPPRNVCTGRQE Trigger: TTCCTGTCTTCCTGTACAAACATTCCTTGGGGGACCCACTTGCAAACTGTTGACCAAAAGTGCCATCTTCCAAAGCCCAGAGAATAATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 72 bp | TGTAGCTTCTTGGTCTGTTGCGATAACTCCTTGTTCTaGAATGTTGGCTTCAGGTTCTTCTGCCTGGACAAC | + |
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Preference number: 6 (lower is better) Translates to: CSFLVCCDNSLF*NVGFRFFCLDN Trigger: GTTGTCCAGGCAGAAGAACCTGAAGCCAACATTCCAGAACAAGGAGTTATCGCAACAGACCAAGAAGCTACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 72 bp | TTTGGAAGATGGCACTTTTGGTCAACAGTTTGCAAGTaGGTCCCCCAAGGAATGTTTGTACAGGAAGACAGG | + |
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Preference number: 6 (lower is better) Translates to: FGRWHFWSTVCK*VPQGMFVQEDR Trigger: CCTGTCTTCCTGTACAAACATTCCTTGGGGGACCCACTTGCAAACTGTTGACCAAAAGTGCCATCTTCCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CAA 72 bp | GACAGATGTAGCTTCTTGGTCTGTTGCGATAACTCCTaGTTCTGGAATGTTGGCTTCAGGTTCTTCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: DRCSFLVCCDNS*FWNVGFRFFCL Trigger: CAGGCAGAAGAACCTGAAGCCAACATTCCAGAACAAGGAGTTATCGCAACAGACCAAGAAGCTACATCTGTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CAA 72 bp | GACTGTGACGCTTCATCCCCAGTACATACTAGGACATaGCCATTATTCTCTGGGCTTTGGAAGATGGCACTT | + |
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Preference number: 6 (lower is better) Translates to: DCDASSPVHTRT*PLFSGLWKMAL Trigger: AAGTGCCATCTTCCAAAGCCCAGAGAATAATGGCAATGTCCTAGTATGTACTGGGGATGAAGCGTCACAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CAA 90 bp | AACAGTGTAGACTGTGACGCTTCATCCCCAGTACATACTAGGACATaGCCATTATTCTCTGGGCTTTGGAAGATGGCACTTTTGGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: NSVDCDASSPVHTRT*PLFSGLWKMALLVN Trigger: GTTGACCAAAAGTGCCATCTTCCAAAGCCCAGAGAATAATGGCAATGTCCTAGTATGTACTGGGGATGAAGCGTCACAGTCTACACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS GCA 72 bp | TGTGCAGACTCTAACTCAGCTTGCTTCCTGAGCATTTaGTCATTCAGTAAGTCACTTTTCATGCGCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: CADSNSACFLSI*SFSKSLFMRSC Trigger: ACAGGAGCGCATGAAAAGTGACTTACTGAATGAGCAAATGCTCAGGAAGCAAGCTGAGTTAGAGTCTGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS GCA 72 bp | ACTGTGACGCTTCATCCCCAGTACATACTAGGACATTaGCATTATTCTCTGGGCTTTGGAAGATGGCACTTT | + |
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Preference number: 6 (lower is better) Translates to: TVTLHPQYILGH*HYSLGFGRWHF Trigger: AAAGTGCCATCTTCCAAAGCCCAGAGAATAATGGCAATGTCCTAGTATGTACTGGGGATGAAGCGTCACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS TCA 72 bp | AATCCACGAATCTGCTTGTTGTGCATAGGAATATACTaGCTGCTCTTCATGTTGGCAGTACTCAACATCTTA | + |
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Preference number: 6 (lower is better) Translates to: NPRICLLCIGIY*LLFMLAVLNIL Trigger: TAAGATGTTGAGTACTGCCAACATGAAGAGCAGTCAGTATATTCCTATGCACAACAAGCAGATTCGTGGATT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CCA 72 bp | TTGTGTTCCGTAAGTCATAGATCAGAATTGAACCACTaGCTAGTCCAGCATAGACGTAATTGTTTTCGTCAA | + |
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Preference number: 6 (lower is better) Translates to: LCSVSHRSELNH*LVQHRRNCFRQ Trigger: TTGACGAAAACAATTACGTCTATGCTGGACTAGCCAGTGGTTCAATTCTGATCTATGACTTACGGAACACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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| CDS CAA 90 bp | ATTCCTGAATATAGGTGTTTGTGTTCCGTAAGTCATAGATCAGAATaGAACCACTGGCTAGTCCAGCATAGACGTAATTGTTTTCGTCAA | + |
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Preference number: 6 (lower is better) Translates to: IPEYRCLCSVSHRSE*NHWLVQHRRNCFRQ Trigger: TTGACGAAAACAATTACGTCTATGCTGGACTAGCCAGTGGTTCAATTCTGATCTATGACTTACGGAACACAAACACCTATATTCAGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038739.5 |
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