Pregenerated sensors for RFTN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025978Ensembl transcript IDs: ENSMUST00000027121.15, ENSMUST00000114428.3, ENSMUST00000132055.8
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTGTCGCTCTGTGCGGGCCGCTCTTCCTTGGTCCAGCACTCCCTaGACGGAGAGAGGGAGCCCTCCTCAAGAGGGGCTCGGCCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: SCRSVRAALPWSSTP*TERGSPPQEGLGLL Trigger: CAGGAGGCCGAGCCCCTCTTGAGGAGGGCTCCCTCTCTCCGTCCAGGGAGTGCTGGACCAAGGAAGAGCGGCCCGCACAGAGCGACAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR CCA 90 bp | GGAGAGAGGGAGCCCTCCTCAAGAGGGGCTCGGCCTCCTGCGGCTTaGGATGCATTTGTGTCCAGGCCTAGGCTCCTGCTGCTGACCTTG | + |
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Preference number: 1 (lower is better) Translates to: GEREPSSRGARPPAA*DAFVSRPRLLLLTL Trigger: CAAGGTCAGCAGCAGGAGCCTAGGCCTGGACACAAATGCATCCCAAGCCGCAGGAGGCCGAGCCCCTCTTGAGGAGGGCTCCCTCTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR GCA 90 bp | GAGGACACTGTCACTGCTACTGAACCCAGAGAAGCTGTCGCTCTGTaGGGGCCGCTCTTCCTTGGTCCAGCACTCCCTGGACGGAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: EDTVTATEPREAVAL*GPLFLGPALPGRRE Trigger: CTCTCTCCGTCCAGGGAGTGCTGGACCAAGGAAGAGCGGCCCGCACAGAGCGACAGCTTCTCTGGGTTCAGTAGCAGTGACAGTGTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR CCA 90 bp | GGCAGCAGGAGGTATGTGGAGTGGGCCAGTGTTATAGACATCACATaGGCTGTGAGCCCCCTCCACTTCTGCAGGACTGGGACGTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: GSRRYVEWASVIDIT*AVSPLHFCRTGTSG Trigger: CCCAGACGTCCCAGTCCTGCAGAAGTGGAGGGGGCTCACAGCCCATGTGATGTCTATAACACTGGCCCACTCCACATACCTCCTGCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR TCA 90 bp | CTGCGGCTTGGGATGCATTTGTGTCCAGGCCTAGGCTCCTGCTGCTaGCCTTGTTTCTGTCTTCACCCTTCAGCAGCCGGCTGCCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: LRLGMHLCPGLGSCC*PCFCLHPSAAGCLS Trigger: GGAAAGGCAGCCGGCTGCTGAAGGGTGAAGACAGAAACAAGGTCAGCAGCAGGAGCCTAGGCCTGGACACAAATGCATCCCAAGCCGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR CCA 90 bp | AAGCTGGCAAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTGGAGTaGGCCAGTGTTATAGACATCACATGGGCTGTGAGCCCCCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: KLARWKAPGSRRYVE*ASVIDITWAVSPLH Trigger: GTGGAGGGGGCTCACAGCCCATGTGATGTCTATAACACTGGCCCACTCCACATACCTCCTGCTGCCAGGAGCCTTCCATCTTGCCAGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR CCA 90 bp | GAAGGCCCCTGTTCTGTACAAGACGAGTCTTTCCCGGGTAGAAGCTaGCAAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTGGAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: EGPCSVQDESFPGRS*QDGRLLAAGGMWSG Trigger: CCCACTCCACATACCTCCTGCTGCCAGGAGCCTTCCATCTTGCCAGCTTCTACCCGGGAAAGACTCGTCTTGTACAGAACAGGGGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR CCA 90 bp | CACCTGGCAACTCACATGCAAGTGACCTGTGTCACGCCCTCTTCCTaGTCAAACTGTCCGTCATCGAGTTCCCGGAGGACACTGTCACTG | + |
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Preference number: 1 (lower is better) Translates to: HLATHMQVTCVTPSS*SNCPSSSSRRTLSL Trigger: CAGTGACAGTGTCCTCCGGGAACTCGATGACGGACAGTTTGACCAGGAAGAGGGCGTGACACAGGTCACTTGCATGTGAGTTGCCAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR CCA 90 bp | AGTTCTGCCTCCTTCTTCACACTGCCTTCTCACAGACTCGGACACTaGTCAGCCTCCCCTCTGCAGTGTCCTCGGAAAGTCCTAGTGACA | + |
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Preference number: 1 (lower is better) Translates to: SSASFFTLPSHRLGH*SASPLQCPRKVLVT Trigger: TGTCACTAGGACTTTCCGAGGACACTGCAGAGGGGAGGCTGACCAGTGTCCGAGTCTGTGAGAAGGCAGTGTGAAGAAGGAGGCAGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
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| 3UTR GCA 90 bp | GCCAGTGTTATAGACATCACATGGGCTGTGAGCCCCCTCCACTTCTaGAGGACTGGGACGTCTGGGCTGTACCATTTTTCCAGGCTTAAC | + |
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Preference number: 1 (lower is better) Translates to: ASVIDITWAVSPLHF*RTGTSGLYHFSRLN Trigger: GTTAAGCCTGGAAAAATGGTACAGCCCAGACGTCCCAGTCCTGCAGAAGTGGAGGGGGCTCACAGCCCATGTGATGTCTATAACACTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR TCA 90 bp | ATTTACAAGGCCTCTGATGGGGTCACCTGGCAACTCACATGCAAGTaGCCTGTGTCACGCCCTCTTCCTGGTCAAACTGTCCGTCATCGA | + |
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Preference number: 1 (lower is better) Translates to: IYKASDGVTWQLTCK*PVSRPLPGQTVRHR Trigger: TCGATGACGGACAGTTTGACCAGGAAGAGGGCGTGACACAGGTCACTTGCATGTGAGTTGCCAGGTGACCCCATCAGAGGCCTTGTAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR CCA 90 bp | CTTTGTAGAACTGGTTCCCTCTACATTTCTATGGGTTCCAGAGACTaGACTCAGGTCACAAGGCTCCTGTGGCGAGCGCCTTTACCTGTC | + |
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Preference number: 1 (lower is better) Translates to: LCRTGSLYISMGSRD*TQVTRLLWRAPLPV Trigger: GACAGGTAAAGGCGCTCGCCACAGGAGCCTTGTGACCTGAGTCCAGTCTCTGGAACCCATAGAAATGTAGAGGGAACCAGTTCTACAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR GCA 90 bp | CAACTATTCAAAACAAAGAGTCCAGTTCTGCCTCCTTCTTCACACTaGCTTCTCACAGACTCGGACACTGGTCAGCCTCCCCTCTGCAGT | + |
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Preference number: 1 (lower is better) Translates to: QLFKTKSPVLPPSSH*LLTDSDTGQPPLCS Trigger: ACTGCAGAGGGGAGGCTGACCAGTGTCCGAGTCTGTGAGAAGGCAGTGTGAAGAAGGAGGCAGAACTGGACTCTTTGTTTTGAATAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
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| 3UTR GCA 90 bp | CACTTTCAGACAAGTGTCCACCAAGGGCTCCTTCATTCCAGCCTTTaGAGTTGTCTTGTGAATCTTGTCTCACGTGTAGCCCCGACTCTG | + |
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Preference number: 1 (lower is better) Translates to: HFQTSVHQGLLHSSL*SCLVNLVSRVAPTL Trigger: CAGAGTCGGGGCTACACGTGAGACAAGATTCACAAGACAACTGCAAAGGCTGGAATGAAGGAGCCCTTGGTGGACACTTGTCTGAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR GCA 90 bp | TCTGACAATATTTGTGATGATGGCAGAAGCAAGACGGAGCAAATCTaGATTGTTTCCTGGTGTGCTCGGGATGGCAGGCATCAACTATTC | + |
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Preference number: 1 (lower is better) Translates to: SDNICDDGRSKTEQI*IVSWCARDGRHQLF Trigger: GAATAGTTGATGCCTGCCATCCCGAGCACACCAGGAAACAATGCAGATTTGCTCCGTCTTGCTTCTGCCATCATCACAAATATTGTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
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| 3UTR CCA 90 bp | TGTGATGATGGCAGAAGCAAGACGGAGCAAATCTGCATTGTTTCCTaGTGTGCTCGGGATGGCAGGCATCAACTATTCAAAACAAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: CDDGRSKTEQICIVS*CARDGRHQLFKTKS Trigger: ACTCTTTGTTTTGAATAGTTGATGCCTGCCATCCCGAGCACACCAGGAAACAATGCAGATTTGCTCCGTCTTGCTTCTGCCATCATCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
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| 3UTR TCA 90 bp | CTGCCTGCCAAATACTTAGAGGTGTGCCAGCTTGCTTGGCATAGATaGAATGTTTTCATAGACCATGGCTTTTATACATTGAGATTGTGG | + |
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Preference number: 1 (lower is better) Translates to: LPAKYLEVCQLAWHR*NVFIDHGFYTLRLW Trigger: CCACAATCTCAATGTATAAAAGCCATGGTCTATGAAAACATTTCATCTATGCCAAGCAAGCTGGCACACCTCTAAGTATTTGGCAGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR TCA 90 bp | GCACTCCCTGGACGGAGAGAGGGAGCCCTCCTCAAGAGGGGCTCGGCCTCCTGCCTAGGCTCCTGCTGCTaGCCTTGTTTCTGTCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: ALPGRREGALLKRGSASCLGSCC*PCFCLH Trigger: GTGAAGACAGAAACAAGGTCAGCAGCAGGAGCCTAG...GCAGGAGGCCGAGCCCCTCTTGAGGAGGGCTCCCTCTCTCCGTCCAGGGAGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR-3UTR TCA 90 bp | CGCCCTCTTCCTGGTCAAACTGTCCGTCATCGAGTTCCCGGAGGACACTGTCACTTTCACAGCCCTCAATaGCTGTCCACTGCTCCACCA | + |
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Preference number: 2 (lower is better) Translates to: RPLPGQTVRHRVPGGHCHFHSPQ*LSTAPP Trigger: TGGTGGAGCAGTGGACAGTCATTGAGGGCTGTGAAA...GTGACAGTGTCCTCCGGGAACTCGATGACGGACAGTTTGACCAGGAAGAGGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR-3UTR CCA 90 bp | CTATTTACAAGGCCTCTGATGGGGTCACCTGGCAACTCACATGCAAGTGACCTGTGGTCCAGCACTCCCTaGACGGAGAGAGGGAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LFTRPLMGSPGNSHASDLWSSTP*TERGSP Trigger: AGGGCTCCCTCTCTCCGTCCAGGGAGTGCTGGACCA...CAGGTCACTTGCATGTGAGTTGCCAGGTGACCCCATCAGAGGCCTTGTAAATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTCCCGGGTAGAAGCTGGCAAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTGAGGCTGTAGCTTCCTaGGAAGGCGCTAATTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: LSRVEAGKMEGSWQQEVCEAVAS*EGANWL Trigger: CAACCAATTAGCGCCTTCTCAGGAAGCTACAGCCTC...ACATACCTCCTGCTGCCAGGAGCCTTCCATCTTGCCAGCTTCTACCCGGGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR GCA 90 bp | AAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTGGAGTGGGCCAGTGTTATAGATGGGGCAGGTGGTTATaGACAGCCATGCAGTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: KMEGSWQQEVCGVGQCYRWGRWL*TAMQCP Trigger: AGGGCACTGCATGGCTGTGCATAACCACCTGCCCCA...TCTATAACACTGGCCCACTCCACATACCTCCTGCTGCCAGGAGCCTTCCATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR TCA 90 bp | GTATGTGGAGTGGGCCAGTGTTATAGACATCACATGGGCTGTGAGCCCCCTCCACTGTGTAGCCCTGGCTaGCCTAGAACTCACAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: VCGVGQCYRHHMGCEPPPLCSPG*PRTHRD Trigger: ATCTCTGTGAGTTCTAGGTCAGCCAGGGCTACACAG...TGGAGGGGGCTCACAGCCCATGTGATGTCTATAACACTGGCCCACTCCACATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR GCA 90 bp | AGAAGCTGTCGCTCTGTGCGGGCCGCTCTTCCTTGGTCCAGCACTCCCTGGACGCTTCATTCCAGCCTTTaGAGTTGTCTTGTGAATCTT | + |
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Preference number: 2 (lower is better) Translates to: RSCRSVRAALPWSSTPWTLHSSL*SCLVNL Trigger: AAGATTCACAAGACAACTGCAAAGGCTGGAATGAAG...CGTCCAGGGAGTGCTGGACCAAGGAAGAGCGGCCCGCACAGAGCGACAGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR-3UTR CCA 90 bp | CACATGCAAGTGACCTGTGTCACGCCCTCTTCCTGGTCAAACTGTCCGTCATCGTCTGCAACTCCATCGTaGCTGGCTCCATTACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: HMQVTCVTPSSWSNCPSSSATPS*LAPLQC Trigger: GCACTGTAATGGAGCCAGCCACGATGGAGTTGCAGA...CGATGACGGACAGTTTGACCAGGAAGAGGGCGTGACACAGGTCACTTGCATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTCCCGGGTAGAAGCTGGCAAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTAAGTTAATGGTTTACTaGAGGACTGGCCACCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: LSRVEAGKMEGSWQQEVCKLMVY*RTGHLV Trigger: CACCAGGTGGCCAGTCCTTCAGTAAACCATTAACTT...ACATACCTCCTGCTGCCAGGAGCCTTCCATCTTGCCAGCTTCTACCCGGGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR GCA 90 bp | CAAGACGGAGCAAATCTGCATTGTTTCCTGGTGTGCTCGGGATGGCAGGCATCACCTCCTTCTTCACACTaGCTTCTCACAGACTCGGAC | + |
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Preference number: 2 (lower is better) Translates to: QDGANLHCFLVCSGWQASPPSSH*LLTDSD Trigger: GTCCGAGTCTGTGAGAAGGCAGTGTGAAGAAGGAGG...TGATGCCTGCCATCCCGAGCACACCAGGAAACAATGCAGATTTGCTCCGTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGTAGCCCTGGCTGACCTAGAACTCACAGAGATCTACCTACATCTGCCTGCCATGGGTTCCAGAGACTaGACTCAGGTCACAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: CVALADLELTEIYLHLPAMGSRD*TQVTRL Trigger: GAGCCTTGTGACCTGAGTCCAGTCTCTGGAACCCAT...GGCAGGCAGATGTAGGTAGATCTCTGTGAGTTCTAGGTCAGCCAGGGCTACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGGTATGTGGAGTGGGCCAGTGTTATAGACATCACATGGGCTGTGAGCCCATGAGTCTGTGTCCATaGGAGAGAGGGACAGAGATA | + |
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Preference number: 2 (lower is better) Translates to: QEVCGVGQCYRHHMGCEPMSLCP*ERGTEI Trigger: TATCTCTGTCCCTCTCTCCCATGGACACAGACTCAT...GGGCTCACAGCCCATGTGATGTCTATAACACTGGCCCACTCCACATACCTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR CAA 90 bp | TCAGACAAGTGTCCACCAAGGGCTCCTTCATTCCAGCCTTTGCAGTaGTCTTGTGAATCTTGTCTCACGTGTAGCCCCGACTCTGCAACT | + |
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Preference number: 2 (lower is better) Translates to: SDKCPPRAPSFQPLQ*SCESCLTCSPDSAT Trigger: AGTTGCAGAGTCGGGGCTACACGTGAGACAAGATTCACAAGACAACTGCAAAGGCTGGAATGAAGGAGCCCTTGGTGGACACTTGTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR CAA 90 bp | CCACTTTCAGACAAGTGTCCACCAAGGGCTCCTTCATTCCAGCCTTaGCAGTTGTCTTGTGAATCTTGTCTCACGTGTAGCCCCGACTCT | + |
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Preference number: 2 (lower is better) Translates to: PLSDKCPPRAPSFQP*QLSCESCLTCSPDS Trigger: AGAGTCGGGGCTACACGTGAGACAAGATTCACAAGACAACTGCAAAGGCTGGAATGAAGGAGCCCTTGGTGGACACTTGTCTGAAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR-3UTR CCA 90 bp | AAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTGGAGTGGGCCAGTGTTATAGACCCTCTACATTTCTATaGGTTCCAGAGACTGGACTC | + |
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Preference number: 2 (lower is better) Translates to: KMEGSWQQEVCGVGQCYRPSTFL*VPETGL Trigger: GAGTCCAGTCTCTGGAACCCATAGAAATGTAGAGGG...TCTATAACACTGGCCCACTCCACATACCTCCTGCTGCCAGGAGCCTTCCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR TCA 90 bp | TGTGTAGCCCTGGCTGACCTAGAACTCACAGAGATCTACCTACATCTGCCTGCCGAAGGTTCAGCCAGTTaGATTCTTCCTAGATTGGAG | + |
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Preference number: 2 (lower is better) Translates to: CVALADLELTEIYLHLPAEGSAS*ILPRLE Trigger: CTCCAATCTAGGAAGAATTCAACTGGCTGAACCTTC...GGCAGGCAGATGTAGGTAGATCTCTGTGAGTTCTAGGTCAGCCAGGGCTACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR GCA 90 bp | AAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTGGAGTGGGCCAGTGTTATAGACTACCTACATCTGCCTaGCAAATACTTAGAGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: KMEGSWQQEVCGVGQCYRLPTSA*QILRGV Trigger: CACACCTCTAAGTATTTGGCAGGCAGATGTAGGTAG...TCTATAACACTGGCCCACTCCACATACCTCCTGCTGCCAGGAGCCTTCCATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR GCA 90 bp | TGTCCGTCATCGAGTTCCCGGAGGACACTGTCACTGCTACTGAACCCAGAGAAGTGGAGAAATACGACTTaGTTGGTAGCCAAATTCCCT | + |
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Preference number: 2 (lower is better) Translates to: CPSSSSRRTLSLLLNPEKWRNTT*LVAKFP Trigger: AGGGAATTTGGCTACCAAGCAAGTCGTATTTCTCCA...CTTCTCTGGGTTCAGTAGCAGTGACAGTGTCCTCCGGGAACTCGATGACGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGGTATGTGGAGTGGGCCAGTGTTATAGACATCACATGGGCTGTGAGCCCGGGGCTTGCTTTGTATaGACATACAACAGTAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: QEVCGVGQCYRHHMGCEPGACFV*TYNSKR Trigger: TCTCTTACTGTTGTATGTCCATACAAAGCAAGCCCC...GGGCTCACAGCCCATGTGATGTCTATAACACTGGCCCACTCCACATACCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR CAA 90 bp | GCAGCTGAGTTCCACGTAACCGGCCTTTGGAGAAATACGACTTGCTaGGTAGCCAAATTCCCTTCACTGTCATGTCTCAATATCGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: AAEFHVTGLWRNTTC*VAKFPSLSCLNIGV Trigger: TACCCCGATATTGAGACATGACAGTGAAGGGAATTTGGCTACCAAGCAAGTCGTATTTCTCCAAAGGCCGGTTACGTGGAACTCAGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGTAGCCCTGGCTGACCTAGAACTCACAGAGATCTACCTACATCTGCCTGCCCCTGATGAGAAATACTaGTATTTGTCCCTTTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: CVALADLELTEIYLHLPAPDEKY*YLSLCG Trigger: CCCACAAAGGGACAAATATCAGTATTTCTCATCAGG...GGCAGGCAGATGTAGGTAGATCTCTGTGAGTTCTAGGTCAGCCAGGGCTACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR CCA 90 bp | AAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTGGAGTGGGCCAGTGTTATAGATCAGTCACCTTTTATTaGACACTCGTTCTCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: KMEGSWQQEVCGVGQCYRSVTFY*TLVLSQ Trigger: CTGACTGAGAACGAGTGTCCAATAAAAGGTGACTGA...TCTATAACACTGGCCCACTCCACATACCTCCTGCTGCCAGGAGCCTTCCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR CCA 90 bp | GTATGTGGAGTGGGCCAGTGTTATAGACATCACATGGGCTGTGAGCCCCCTCCATATACATTGAGATTGTaGGCTCTCCTTTTAATGACT | + |
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Preference number: 2 (lower is better) Translates to: VCGVGQCYRHHMGCEPPPYTLRL*ALLLMT Trigger: AGTCATTAAAAGGAGAGCCCACAATCTCAATGTATA...TGGAGGGGGCTCACAGCCCATGTGATGTCTATAACACTGGCCCACTCCACATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR TCA 90 bp | ACTGTAGTTCTTTTGGAGGTCAGTCTTTCATACCTAAATGAAGGCCCCTGTTCTGAATGGATATTTTCATaGGTCTGTGTCCATGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: TVVLLEVSLSYLNEGPCSEWIFS*VCVHGR Trigger: TCTCCCATGGACACAGACTCATGAAAATATCCATTC...AGAACAGGGGCCTTCATTTAGGTATGAAAGACTGACCTCCAAAAGAACTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR CCA 90 bp | CCAATGTATTTTAAGCTTCTGGACAGGGTTGAGTTTTGTGCTTCCATTTCTCCAGAGGTTTGGCAAAGATaGCGTGGAAGAATGTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: PMYFKLLDRVEFCASISPEVWQR*RGRMSE Trigger: TTCAGACATTCTTCCACGCCATCTTTGCCAAACCTC...TGGAGAAATGGAAGCACAAAACTCAACCCTGTCCAGAAGCTTAAAATACATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
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| 3UTR-3UTR TCA 90 bp | ATAGACCATGGCTTTTATACATTGAGATTGTGGGCTCTCCTTTTAATGACTTTTCCCTTTGTGGGGAAGTaGGCCAGGTTGTTGCTTAAT | + |
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Preference number: 2 (lower is better) Translates to: IDHGFYTLRLWALLLMTFPFVGK*ARLLLN Trigger: ATTAAGCAACAACCTGGCTCACTTCCCCACAAAGGG...AAAAGTCATTAAAAGGAGAGCCCACAATCTCAATGTATAAAAGCCATGGTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR TCA 90 bp | ACTGTAGTTCTTTTGGAGGTCAGTCTTTCATACCTAAATGAAGGCCCCTGTTCTATGGCTTTTATACATTaGGATTGTGGGCTCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: TVVLLEVSLSYLNEGPCSMAFIH*DCGLSF Trigger: AAAGGAGAGCCCACAATCTCAATGTATAAAAGCCAT...AGAACAGGGGCCTTCATTTAGGTATGAAAGACTGACCTCCAAAAGAACTACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR TCA 90 bp | GTGAATTACTTAATGGCAGTCTACTGTAGTTCTTTTGGAGGTCAGTCTTTCATACACCTGGTGGCCTATTaGAAGAAAAGACATAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: VNYLMAVYCSSFGGQSFIHLVAY*KKRHRK Trigger: TTTCCTATGTCTTTTCTTTCAATAGGCCACCAGGTG...TATGAAAGACTGACCTCCAAAAGAACTACAGTAGACTGCCATTAAGTAATTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| 3UTR-3UTR TCA 90 bp | ATAGACCATGGCTTTTATACATTGAGATTGTGGGCTCTCCTTTTAATGACTTTTAGATTAGGGGAAGGCTaGGCCTGGAAATTAAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: IDHGFYTLRLWALLLMTFRLGEG*AWKLKT Trigger: TGTTTTTAATTTCCAGGCTCAGCCTTCCCCTAATCT...AAAAGTCATTAAAAGGAGAGCCCACAATCTCAATGTATAAAAGCCATGGTCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR TCA 72 bp | CGTCATCGAGTTCCCGGAGGACACTGTCACTGCTACTaGACCCAGAGAAGCTGTCGCTCTGTGCGGGCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: RHRVPGGHCHCY*TQRSCRSVRAA Trigger: AGCGGCCCGCACAGAGCGACAGCTTCTCTGGGTTCAGTAGCAGTGACAGTGTCCTCCGGGAACTCGATGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCACTCCCTGGACGGAGAGAGGGAGCCCTCCTCAAGAGGGGCTCGGCCTCCTTTCCAGCCTTTGCAGTaGTCTTGTGAATCTTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: QHSLDGEREPSSRGARPPFQPLQ*SCESCL Trigger: GAGACAAGATTCACAAGACAACTGCAAAGGCTGGAA...AGGAGGCCGAGCCCCTCTTGAGGAGGGCTCCCTCTCTCCGTCCAGGGAGTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
||
| 3UTR GCA 72 bp | CTAGATTGGAGTGGGGCAGGTGGTTATGCACAGCCATaGAGTGCCCTCCATAGTGACCCCTCTTCAGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: LDWSGAGGYAQP*SALHSDPSSGT Trigger: AGTCCCTGAAGAGGGGTCACTATGGAGGGCACTGCATGGCTGTGCATAACCACCTGCCCCACTCCAATCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR CCA 72 bp | AGGTATGTGGAGTGGGCCAGTGTTATAGACATCACATaGGCTGTGAGCCCCCTCCACTTCTGCAGGACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RYVEWASVIDIT*AVSPLHFCRTG Trigger: CCCAGTCCTGCAGAAGTGGAGGGGGCTCACAGCCCATGTGATGTCTATAACACTGGCCCACTCCACATACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR CCA 72 bp | CTTTCCCGGGTAGAAGCTGGCAAGATGGAAGGCTCCTaGCAGCAGGAGGTATGTGGAGTGGGCCAGTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: LSRVEAGKMEGS*QQEVCGVGQCY Trigger: ATAACACTGGCCCACTCCACATACCTCCTGCTGCCAGGAGCCTTCCATCTTGCCAGCTTCTACCCGGGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR CCA 72 bp | TCCTTCTTCACACTGCCTTCTCACAGACTCGGACACTaGTCAGCCTCCCCTCTGCAGTGTCCTCGGAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SFFTLPSHRLGH*SASPLQCPRKV Trigger: GACTTTCCGAGGACACTGCAGAGGGGAGGCTGACCAGTGTCCGAGTCTGTGAGAAGGCAGTGTGAAGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| 3UTR GCA 72 bp | ATAGACATCACATGGGCTGTGAGCCCCCTCCACTTCTaGAGGACTGGGACGTCTGGGCTGTACCATTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: IDITWAVSPLHF*RTGTSGLYHFS Trigger: GGAAAAATGGTACAGCCCAGACGTCCCAGTCCTGCAGAAGTGGAGGGGGCTCACAGCCCATGTGATGTCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR GCA 72 bp | GATGGCGTGGAAGAATGTCTGAAAAGACATTCCAGCTaGACAAAGTGGGAGCGCCGCCCTGGGGCTCTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: DGVEECLKRHSS*TKWERRPGALR Trigger: TCTTAGAGCCCCAGGGCGGCGCTCCCACTTTGTGCAGCTGGAATGTCTTTTCAGACATTCTTCCACGCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| 3UTR CCA 72 bp | ACTGGTTCCCTCTACATTTCTATGGGTTCCAGAGACTaGACTCAGGTCACAAGGCTCCTGTGGCGAGCGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TGSLYISMGSRD*TQVTRLLWRAP Trigger: AGGCGCTCGCCACAGGAGCCTTGTGACCTGAGTCCAGTCTCTGGAACCCATAGAAATGTAGAGGGAACCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR CCA 72 bp | ACTCACATGCAAGTGACCTGTGTCACGCCCTCTTCCTaGTCAAACTGTCCGTCATCGAGTTCCCGGAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: THMQVTCVTPSS*SNCPSSSSRRT Trigger: TGTCCTCCGGGAACTCGATGACGGACAGTTTGACCAGGAAGAGGGCGTGACACAGGTCACTTGCATGTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
||
| 3UTR CCA 72 bp | TGTTCTGTACAAGACGAGTCTTTCCCGGGTAGAAGCTaGCAAGATGGAAGGCTCCTGGCAGCAGGAGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: CSVQDESFPGRS*QDGRLLAAGGM Trigger: CATACCTCCTGCTGCCAGGAGCCTTCCATCTTGCCAGCTTCTACCCGGGAAAGACTCGTCTTGTACAGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR TCA 72 bp | GATAGGCCCAGCTGGCCGCATCTTCCTCAAAAGCATTaGAGACCATGTACAGCTTACCATCTGGGGCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: DRPSWPHLPQKH*RPCTAYHLGLL Trigger: GAGAAGCCCCAGATGGTAAGCTGTACATGGTCTTCAATGCTTTTGAGGAAGATGCGGCCAGCTGGGCCTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
||
| 3UTR CCA 72 bp | GAAGAATGTCTGAAAAGACATTCCAGCTGCACAAAGTaGGAGCGCCGCCCTGGGGCTCTAAGAACTAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EECLKRHSSCTK*ERRPGALRTKA Trigger: GGCTTTAGTTCTTAGAGCCCCAGGGCGGCGCTCCCACTTTGTGCAGCTGGAATGTCTTTTCAGACATTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTGGAGTGGGCCAGTGTTATAGACTGATATTTGTCCCTTaGTGGGGAAGTGAGCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KMEGSWQQEVCGVGQCYRLIFVP*WGSEPG Trigger: ACCTGGCTCACTTCCCCACAAAGGGACAAATATCAG...TCTATAACACTGGCCCACTCCACATACCTCCTGCTGCCAGGAGCCTTCCATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR-3UTR CAA 90 bp | CGTAGCTGGGGCTGCTGTTCCTCTCTGTCTGATGCTGTCCACTTTCATGCTGAGCCTTCATTCCAGCCTTaGCAGTTGTCTTGTGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: RSWGCCSSLSDAVHFHAEPSFQP*QLSCES Trigger: AGATTCACAAGACAACTGCAAAGGCTGGAATGAAGG...CTCAGCATGAAAGTGGACAGCATCAGACAGAGAGGAACAGCAGCCCCAGCTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAAACTGTCCGTCATCGAGTTCCCGGAGGACACTGTCACTGCTACTGAACCCTTGGAGAAATACGACTaGCTTGGTAGCCAAATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VKLSVIEFPEDTVTATEPLEKYD*LGSQIP Trigger: GGGAATTTGGCTACCAAGCAAGTCGTATTTCTCCAA...GGGTTCAGTAGCAGTGACAGTGTCCTCCGGGAACTCGATGACGGACAGTTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
||
| 3UTR CCA 72 bp | AACTCCATCGTGGCTGGCTCCATTACAGTGCATAGATaGCAAGTAGCACTGGGAGACCAGCCCAACAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: NSIVAGSITVHR*QVALGDQPNKL Trigger: AAGTTTGTTGGGCTGGTCTCCCAGTGCTACTTGCCATCTATGCACTGTAATGGAGCCAGCCACGATGGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTAGCCCTGGCTGACCTAGAACTCACAGAGATCTACCTACATCTGCCTGCCGTCAGTCACCTTTTATaGGACACTCGTTCTCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CVALADLELTEIYLHLPAVSHLL*DTRSQS Trigger: TGACTGAGAACGAGTGTCCAATAAAAGGTGACTGAC...GGCAGGCAGATGTAGGTAGATCTCTGTGAGTTCTAGGTCAGCCAGGGCTACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR TCA 72 bp | AGTAGAGGTTTGGCAAAGATGGCGTGGAAGAATGTCTaGAAAGACATTCCAGCTGCACAAAGTGGGAGCGCC | + |
|
Preference number: 3 (lower is better) Translates to: SRGLAKMAWKNV*KDIPAAQSGSA Trigger: GGCGCTCCCACTTTGTGCAGCTGGAATGTCTTTTCAGACATTCTTCCACGCCATCTTTGCCAAACCTCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| 3UTR GCA 72 bp | ATTTGTGATGATGGCAGAAGCAAGACGGAGCAAATCTaGATTGTTTCCTGGTGTGCTCGGGATGGCAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: ICDDGRSKTEQI*IVSWCARDGRH Trigger: ATGCCTGCCATCCCGAGCACACCAGGAAACAATGCAGATTTGCTCCGTCTTGCTTCTGCCATCATCACAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| 3UTR CCA 72 bp | GGTATGAAGGTTCAGCCAGTTGAATTCTTCCTAGATTaGAGTGGGGCAGGTGGTTATGCACAGCCATGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GMKVQPVEFFLD*SGAGGYAQPCS Trigger: ACTGCATGGCTGTGCATAACCACCTGCCCCACTCCAATCTAGGAAGAATTCAACTGGCTGAACCTTCATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTGGAGTGGGCCAGTGTTATAGACATGGCTTTTATACATaGAGATTGTGGGCTCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: KMEGSWQQEVCGVGQCYRHGFYT*RLWALL Trigger: AAGGAGAGCCCACAATCTCAATGTATAAAAGCCATG...TCTATAACACTGGCCCACTCCACATACCTCCTGCTGCCAGGAGCCTTCCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAGGTATGTGGAGTGGGCCAGTGTTATAGACATCACATGGGCTGTGAGCCCAGATTTTGTTGGTTGTaGTTTGAGACATGGTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QEVCGVGQCYRHHMGCEPRFCWL*FETWSH Trigger: GTGAGACCATGTCTCAAACAACAACCAACAAAATCT...GGGCTCACAGCCCATGTGATGTCTATAACACTGGCCCACTCCACATACCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR TCA 72 bp | ACTCGTTCTCAGTCAGGGTATGAAGGTTCAGCCAGTTaGATTCTTCCTAGATTGGAGTGGGGCAGGTGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: TRSQSGYEGSAS*ILPRLEWGRWL Trigger: TAACCACCTGCCCCACTCCAATCTAGGAAGAATTCAACTGGCTGAACCTTCATACCCTGACTGAGAACGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR GCA 72 bp | GAGTTCCACGTAACCGGCCTTTGGAGAAATACGACTTaGTTGGTAGCCAAATTCCCTTCACTGTCATGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: EFHVTGLWRNTT*LVAKFPSLSCL Trigger: GAGACATGACAGTGAAGGGAATTTGGCTACCAAGCAAGTCGTATTTCTCCAAAGGCCGGTTACGTGGAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
||
| 3UTR CCA 72 bp | GGAGCAAATCTGCATTGTTTCCTGGTGTGCTCGGGATaGCAGGCATCAACTATTCAAAACAAAGAGTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GANLHCFLVCSG*QASTIQNKESS Trigger: ACTGGACTCTTTGTTTTGAATAGTTGATGCCTGCCATCCCGAGCACACCAGGAAACAATGCAGATTTGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| 3UTR TCA 72 bp | ACAGTCGGCCTTTTCAATAGGCCTGATGAGAAATACTaGTATTTGTCCCTTTGTGGGGAAGTGAGCCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TVGLFNRPDEKY*YLSLCGEVSQV Trigger: AACCTGGCTCACTTCCCCACAAAGGGACAAATATCAGTATTTCTCATCAGGCCTATTGAAAAGGCCGACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR TCA 72 bp | AGATGGCAGTCATTTAATTACTATTTACAAGGCCTCTaGTGGGGTCACCTGGCAACTCACATGCAAGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: RWQSFNYYLQGL*WGHLATHMQVT Trigger: GGTCACTTGCATGTGAGTTGCCAGGTGACCCCATCAGAGGCCTTGTAAATAGTAATTAAATGACTGCCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
||
| 3UTR TCA 72 bp | TGTAGTTCTTTTGGAGGTCAGTCTTTCATACCTAAATaGAGGCCCCTGTTCTGTACAAGACGAGTCTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: CSSFGGQSFIPK*RPLFCTRRVFP Trigger: GGGAAAGACTCGTCTTGTACAGAACAGGGGCCTTCATTTAGGTATGAAAGACTGACCTCCAAAAGAACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR TCA 72 bp | ATGAGAAATACTGATATTTGTCCCTTTGTGGGGAAGTaGGCCAGGTTGTTGCTTAATGACCAGAGGAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: MRNTDICPFVGK*ARLLLNDQRRH Trigger: ATGTCTCCTCTGGTCATTAAGCAACAACCTGGCTCACTTCCCCACAAAGGGACAAATATCAGTATTTCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR-3UTR CAA 90 bp | GTGAATTACTTAATGGCAGTCTACTGTAGTTCTTTTGGAGGTCAGTCTTTCATAGCTGGTTATTCTTCCTaGTCTCAGAGGTTAAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: VNYLMAVYCSSFGGQSFIAGYSS*SQRLSQ Trigger: TTGGCTTAACCTCTGAGACAAGGAAGAATAACCAGC...TATGAAAGACTGACCTCCAAAAGAACTACAGTAGACTGCCATTAAGTAATTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR-3UTR CAA 90 bp | ATAGACCATGGCTTTTATACATTGAGATTGTGGGCTCTCCTTTTAATGACTTTTCAAATGGGGCTTGCTTaGTATGGACATACAACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: IDHGFYTLRLWALLLMTFQMGLA*YGHTTV Trigger: TACTGTTGTATGTCCATACAAAGCAAGCCCCATTTG...AAAAGTCATTAAAAGGAGAGCCCACAATCTCAATGTATAAAAGCCATGGTCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR TCA 72 bp | AAATACTTAGAGGTGTGCCAGCTTGCTTGGCATAGATaGAATGTTTTCATAGACCATGGCTTTTATACATTG | + |
|
Preference number: 3 (lower is better) Translates to: KYLEVCQLAWHR*NVFIDHGFYTL Trigger: CAATGTATAAAAGCCATGGTCTATGAAAACATTTCATCTATGCCAAGCAAGCTGGCACACCTCTAAGTATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTTGACTTTATCAACCGTCTGTACTTCTTTAAGTATCTTGAAAGGAAGAGATCTTCCTCAAAAGCATaGAAGACCATGTACAGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PFDFINRLYFFKYLERKRSSSKA*KTMYSL Trigger: TAAGCTGTACATGGTCTTCAATGCTTTTGAGGAAGA...TCTCTTCCTTTCAAGATACTTAAAGAAGTACAGACGGTTGATAAAGTCAAAAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
||
| 3UTR CCA 72 bp | GTGAAATGTAAGAATGCTTTTAAACTGATAAATAGCTaGTTATTCTTCCTTGTCTCAGAGGTTAAGCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VKCKNAFKLINS*LFFLVSEVKPK Trigger: CTTTGGCTTAACCTCTGAGACAAGGAAGAATAACCAGCTATTTATCAGTTTAAAAGCATTCTTACATTTCAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTGGAGTGGGCCAGTGTTGGGGTTTGAGCAGCTaGGTTCCACGTAACCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGKMEGSWQQEVCGVGQCWGLSS*VPRNRP Trigger: AGGCCGGTTACGTGGAACTCAGCTGCTCAAACCCCA...ACACTGGCCCACTCCACATACCTCCTGCTGCCAGGAGCCTTCCATCTTGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCAGTGTCCTCGGAAAGTCCTAGTGACACACACTCCAGTGTCCAGACCGCCGCCTGCTGCAGAATaGTTGGGGCTTAGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLQCPRKVLVTHTPVSRPPPAAE*LGLSFS Trigger: GCTGAAGCTAAGCCCCAAGCATTCTGCAGCAGGCGG...CGGTCTGGACACTGGAGTGTGTGTCACTAGGACTTTCCGAGGACACTGCAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR CCA 90 bp | GTATGTGGAGTGGGCCAGTGTTATAGACATCACATGGGCTGTGAGCCCCCTCCACTGCTGCAGAATGCTTaGGGCTTAGCTTCAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCGVGQCYRHHMGCEPPPLLQNA*GLASAG Trigger: CCCGGCTGAAGCTAAGCCCCAAGCATTCTGCAGCAG...TGGAGGGGGCTCACAGCCCATGTGATGTCTATAACACTGGCCCACTCCACATAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR TCA 90 bp | CTTTCCCGGGTAGAAGCTGGCAAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTCTAGGCTCCTGCTGCTaGCCTTGTTTCTGTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSRVEAGKMEGSWQQEVCLGSCC*PCFCLH Trigger: GTGAAGACAGAAACAAGGTCAGCAGCAGGAGCCTAG...ACATACCTCCTGCTGCCAGGAGCCTTCCATCTTGCCAGCTTCTACCCGGGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCAGTGTCCTCGGAAAGTCCTAGTGACACACACTCCAGTGTCCAGACCGGGAAGGTGCTTCCGCTaGCCCACAGGTTGTATAACT | + |
|
Preference number: 4 (lower is better) Translates to: PLQCPRKVLVTHTPVSRPGRCFR*PTGCIT Trigger: AGTTATACAACCTGTGGGGCAGCGGAAGCACCTTCC...CGGTCTGGACACTGGAGTGTGTGTCACTAGGACTTTCCGAGGACACTGCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR TCA 90 bp | CAGGAGGTATGTGGAGTGGGCCAGTGTTATAGACATCACATGGGCTGTGAGCCCTTTCACAGCCCTCAATaGCTGTCCACTGCTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QEVCGVGQCYRHHMGCEPFHSPQ*LSTAPP Trigger: TGGTGGAGCAGTGGACAGTCATTGAGGGCTGTGAAA...GGGCTCACAGCCCATGTGATGTCTATAACACTGGCCCACTCCACATACCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR GCA 90 bp | GCTGGCAAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTGGAGTGGGCCAGTGTGTCTTTGTTTCCACTTaGGGTCTCTTCAGGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGKMEGSWQQEVCGVGQCVFVST*GLFRVE Trigger: TTCTACCCTGAAGAGACCGCAAGTGGAAACAAAGAC...ACACTGGCCCACTCCACATACCTCCTGCTGCCAGGAGCCTTCCATCTTGCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR GCA 90 bp | GTATGTGGAGTGGGCCAGTGTTATAGACATCACATGGGCTGTGAGCCCCCTCCAGGAAGGTGCTTCCGCTaGCCCACAGGTTGTATAACT | + |
|
Preference number: 4 (lower is better) Translates to: VCGVGQCYRHHMGCEPPPGRCFR*PTGCIT Trigger: AGTTATACAACCTGTGGGGCAGCGGAAGCACCTTCC...TGGAGGGGGCTCACAGCCCATGTGATGTCTATAACACTGGCCCACTCCACATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR GCA 90 bp | CCTCGGAAAGTCCTAGTGACACACACTCCAGTGTCCAGACCGCAGGCTGAGGGGAACCGAAAGTTGGAATaGCTCCAACTTAGCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRKVLVTHTPVSRPQAEGNRKLE*LQLSHF Trigger: AAAGTGGCTAAGTTGGAGGCATTCCAACTTTCGGTT...CCCCTCAGCCTGCGGTCTGGACACTGGAGTGTGTGTCACTAGGACTTTCCGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| 3UTR CAA 72 bp | GTGATGATGGCAGAAGCAAGACGGAGCAAATCTGCATaGTTTCCTGGTGTGCTCGGGATGGCAGGCATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VMMAEARRSKSA*FPGVLGMAGIN Trigger: GTTGATGCCTGCCATCCCGAGCACACCAGGAAACAATGCAGATTTGCTCCGTCTTGCTTCTGCCATCATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| 3UTR CAA 72 bp | TGTCCACCAAGGGCTCCTTCATTCCAGCCTTTGCAGTaGTCTTGTGAATCTTGTCTCACGTGTAGCCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: CPPRAPSFQPLQ*SCESCLTCSPD Trigger: GTCGGGGCTACACGTGAGACAAGATTCACAAGACAACTGCAAAGGCTGGAATGAAGGAGCCCTTGGTGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGACATTCCAGCTGCACAAAGTGGGAGCGCCGCCCTGGGGCTCTAAGAACTCACAGGTTGTATAACTaGGTGAATGGCCCCAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: KRHSSCTKWERRPGALRTHRLYN*VNGPNN Trigger: GTTGTTGGGGCCATTCACCCAGTTATACAACCTGTG...AGTTCTTAGAGCCCCAGGGCGGCGCTCCCACTTTGTGCAGCTGGAATGTCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR GCA 90 bp | GTCAAACTGTCCGTCATCGAGTTCCCGGAGGACACTGTCACTGCTACTGAACCCATATTTTTCCAGGGCTaGTTTCATCAGGGTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VKLSVIEFPEDTVTATEPIFFQG*FHQGLP Trigger: TGGAAGACCCTGATGAAAGCAGCCCTGGAAAAATAT...GGGTTCAGTAGCAGTGACAGTGTCCTCCGGGAACTCGATGACGGACAGTTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
||
| CDS-3UTR GCA 90 bp | GTATGTGGAGTGGGCCAGTGTTATAGACATCACATGGGCTGTGAGCCCCCTCCATGGAGAAATACGACTTaGTTGGTAGCCAAATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VCGVGQCYRHHMGCEPPPWRNTT*LVAKFP Trigger: AGGGAATTTGGCTACCAAGCAAGTCGTATTTCTCCA...TGGAGGGGGCTCACAGCCCATGTGATGTCTATAACACTGGCCCACTCCACATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| 3UTR CAA 72 bp | GACAAGTGTCCACCAAGGGCTCCTTCATTCCAGCCTTaGCAGTTGTCTTGTGAATCTTGTCTCACGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: DKCPPRAPSFQP*QLSCESCLTCS Trigger: GCTACACGTGAGACAAGATTCACAAGACAACTGCAAAGGCTGGAATGAAGGAGCCCTTGGTGGACACTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTGGAGTGGGCCAGTGTTATAGAATATTTTTCCAGGGCTaGTTTCATCAGGGTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KMEGSWQQEVCGVGQCYRIFFQG*FHQGLP Trigger: TGGAAGACCCTGATGAAAGCAGCCCTGGAAAAATAT...TCTATAACACTGGCCCACTCCACATACCTCCTGCTGCCAGGAGCCTTCCATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CCA 90 bp | GGCGTGGAAGAATGTCTGAAAAGACATTCCAGCTGCACAAAGTGGGAGCGCCGCAATAGTCTTCCACTTTaGCAACTATATCCAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: GVEECLKRHSSCTKWERRNSLPL*QLYPGL Trigger: CAGTCCTGGATATAGTTGCCAAAGTGGAAGACTATT...GCGGCGCTCCCACTTTGTGCAGCTGGAATGTCTTTTCAGACATTCTTCCACGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR CCA 90 bp | TTTCATAGACCATGGCTTTTATACATTGAGATTGTGGGCTCTCCTTTTAATGACTGGTCCAGCACTCCCTaGACGGAGAGAGGGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FHRPWLLYIEIVGSPFNDWSSTP*TERGSP Trigger: AGGGCTCCCTCTCTCCGTCCAGGGAGTGCTGGACCA...GTCATTAAAAGGAGAGCCCACAATCTCAATGTATAAAAGCCATGGTCTATGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGTTCTTTTGGAGGTCAGTCTTTCATACCTAAATGAAGGCCCCTGTTCTGTCACGCCCTCTTCCTaGTCAAACTGTCCGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: TVVLLEVSLSYLNEGPCSVTPSS*SNCPSS Trigger: CGATGACGGACAGTTTGACCAGGAAGAGGGCGTGAC...AGAACAGGGGCCTTCATTTAGGTATGAAAGACTGACCTCCAAAAGAACTACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR TCA 90 bp | CAAGACGGAGCAAATCTGCATTGTTTCCTGGTGTGCTCGGGATGGCAGGCATCAAACTATATCCAGGACTaGATTTATCTTGATGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: QDGANLHCFLVCSGWQASNYIQD*IYLDDV Trigger: GACGTCATCAAGATAAATTCAGTCCTGGATATAGTT...TGATGCCTGCCATCCCGAGCACACCAGGAAACAATGCAGATTTGCTCCGTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGGTGTGCTCGGGATGGCAGGCATCAACTATTCAAAACAAAGAGTCCAGGTCTTTGTTTCCACTTaGGGTCTCTTCAGGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FPGVLGMAGINYSKQRVQVFVST*GLFRVE Trigger: TTCTACCCTGAAGAGACCGCAAGTGGAAACAAAGAC...CTGGACTCTTTGTTTTGAATAGTTGATGCCTGCCATCCCGAGCACACCAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR CCA 90 bp | CTGATTTCTGACAATATTTGTGATGATGGCAGAAGCAAGACGGAGCAAATCTGCTCTGCAACTCCATCGTaGCTGGCTCCATTACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LISDNICDDGRSKTEQICSATPS*LAPLQC Trigger: GCACTGTAATGGAGCCAGCCACGATGGAGTTGCAGA...GCAGATTTGCTCCGTCTTGCTTCTGCCATCATCACAAATATTGTCAGAAATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| 3UTR CAA 72 bp | TTCCACGTAACCGGCCTTTGGAGAAATACGACTTGCTaGGTAGCCAAATTCCCTTCACTGTCATGTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FHVTGLWRNTTC*VAKFPSLSCLN Trigger: ATTGAGACATGACAGTGAAGGGAATTTGGCTACCAAGCAAGTCGTATTTCTCCAAAGGCCGGTTACGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
||
| CDS-3UTR GCA 90 bp | GCATTGTTTCCTGGTGTGCTCGGGATGGCAGGCATCAACTATTCAAAACAAAGAATATTTTTCCAGGGCTaGTTTCATCAGGGTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALFPGVLGMAGINYSKQRIFFQG*FHQGLP Trigger: TGGAAGACCCTGATGAAAGCAGCCCTGGAAAAATAT...TCTTTGTTTTGAATAGTTGATGCCTGCCATCCCGAGCACACCAGGAAACAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR GCA 90 bp | ATAGACCATGGCTTTTATACATTGAGATTGTGGGCTCTCCTTTTAATGACTTTTCCGCCTGCTGCAGAATaGTTGGGGCTTAGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IDHGFYTLRLWALLLMTFPPAAE*LGLSFS Trigger: GCTGAAGCTAAGCCCCAAGCATTCTGCAGCAGGCGG...AAAAGTCATTAAAAGGAGAGCCCACAATCTCAATGTATAAAAGCCATGGTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGTTCTTTTGGAGGTCAGTCTTTCATACCTAAATGAAGGCCCCTGTTCTCACAGGTTGTATAACTaGGTGAATGGCCCCAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVVLLEVSLSYLNEGPCSHRLYN*VNGPNN Trigger: GTTGTTGGGGCCATTCACCCAGTTATACAACCTGTG...AGAACAGGGGCCTTCATTTAGGTATGAAAGACTGACCTCCAAAAGAACTACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGTTCTTTTGGAGGTCAGTCTTTCATACCTAAATGAAGGCCCCTGTTCTTCTCCTGTTAGAACCTaGGACTCCAGATCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVVLLEVSLSYLNEGPCSSPVRT*DSRSFF Trigger: GAAGAAGGATCTGGAGTCCCAGGTTCTAACAGGAGA...AGAACAGGGGCCTTCATTTAGGTATGAAAGACTGACCTCCAAAAGAACTACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CCA 90 bp | GTGAATTACTTAATGGCAGTCTACTGTAGTTCTTTTGGAGGTCAGTCTTTCATATCTGCAACTCCATCGTaGCTGGCTCCATTACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VNYLMAVYCSSFGGQSFISATPS*LAPLQC Trigger: GCACTGTAATGGAGCCAGCCACGATGGAGTTGCAGA...TATGAAAGACTGACCTCCAAAAGAACTACAGTAGACTGCCATTAAGTAATTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGTTCTTTTGGAGGTCAGTCTTTCATACCTAAATGAAGGCCCCTGTTCTCTTCATTCCAGCCTTTaGAGTTGTCTTGTGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVVLLEVSLSYLNEGPCSLHSSL*SCLVNL Trigger: AAGATTCACAAGACAACTGCAAAGGCTGGAATGAAG...AGAACAGGGGCCTTCATTTAGGTATGAAAGACTGACCTCCAAAAGAACTACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR GCA 90 bp | CTGATTTCTGACAATATTTGTGATGATGGCAGAAGCAAGACGGAGCAAATCTGCCTTCATTCCAGCCTTTaGAGTTGTCTTGTGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LISDNICDDGRSKTEQICLHSSL*SCLVNL Trigger: AAGATTCACAAGACAACTGCAAAGGCTGGAATGAAG...GCAGATTTGCTCCGTCTTGCTTCTGCCATCATCACAAATATTGTCAGAAATCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR TCA 90 bp | GTGAATTACTTAATGGCAGTCTACTGTAGTTCTTTTGGAGGTCAGTCTTTCATAAACTATATCCAGGACTaGATTTATCTTGATGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: VNYLMAVYCSSFGGQSFINYIQD*IYLDDV Trigger: GACGTCATCAAGATAAATTCAGTCCTGGATATAGTT...TATGAAAGACTGACCTCCAAAAGAACTACAGTAGACTGCCATTAAGTAATTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CCA 90 bp | ATAGACCATGGCTTTTATACATTGAGATTGTGGGCTCTCCTTTTAATGACTTTTAATAGTCTTCCACTTTaGCAACTATATCCAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: IDHGFYTLRLWALLLMTFNSLPL*QLYPGL Trigger: CAGTCCTGGATATAGTTGCCAAAGTGGAAGACTATT...AAAAGTCATTAAAAGGAGAGCCCACAATCTCAATGTATAAAAGCCATGGTCTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CAA 90 bp | GCTGGCAAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTGGAGTGGGCCAGTGTGCGGGCCGCTCTTCCTaGGTCCAGCACTCCCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AGKMEGSWQQEVCGVGQCAGRSS*VQHSLD Trigger: GTCCAGGGAGTGCTGGACCAAGGAAGAGCGGCCCGC...ACACTGGCCCACTCCACATACCTCCTGCTGCCAGGAGCCTTCCATCTTGCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CAA 90 bp | CCTCGGAAAGTCCTAGTGACACACACTCCAGTGTCCAGACCGCAGGCTGAGGGGCCGCTGCCCCACAGGTaGTATAACTGGGTGAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRKVLVTHTPVSRPQAEGPLPHR*YNWVNG Trigger: GCCATTCACCCAGTTATACAACCTGTGGGGCAGCGG...CCCCTCAGCCTGCGGTCTGGACACTGGAGTGTGTGTCACTAGGACTTTCCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR CAA 90 bp | CCTCGGAAAGTCCTAGTGACACACACTCCAGTGTCCAGACCGCAGGCTGAGGGGCCCTGTACAGGTGACTaGCTGGAAGGTGCTTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PRKVLVTHTPVSRPQAEGPCTGD*LEGASA Trigger: AGCGGAAGCACCTTCCAGCAAGTCACCTGTACAGGG...CCCCTCAGCCTGCGGTCTGGACACTGGAGTGTGTGTCACTAGGACTTTCCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS TCA 90 bp | TGCTTGGGGCTTAGCTTCAGCCGGGACAGCACCGCCCTGTACAGGTaGCTTGCTGGAAGGTGCTTCCGCTGCCCCACAGGTTGTATAACT | + |
|
Preference number: 5 (lower is better) Translates to: CLGLSFSRDSTALYR*LAGRCFRCPTGCIT Trigger: AGTTATACAACCTGTGGGGCAGCGGAAGCACCTTCCAGCAAGTCACCTGTACAGGGCGGTGCTGTCCCGGCTGAAGCTAAGCCCCAAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027121.15 ENSMUST00000114428.3 |
||
| CDS-3UTR CAA 90 bp | GGCGTGGAAGAATGTCTGAAAAGACATTCCAGCTGCACAAAGTGGGAGCGCCGCCCTCCATCACAAGCCTaGCGCGCCTTTGTCCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVEECLKRHSSCTKWERRPPSQA*RAFVRL Trigger: CAGGCGGACAAAGGCGCGCAAGGCTTGTGATGGAGG...GCGGCGCTCCCACTTTGTGCAGCTGGAATGTCTTTTCAGACATTCTTCCACGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR CAA 90 bp | CTTTCCCGGGTAGAAGCTGGCAAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTCCGCTGCCCCACAGGTaGTATAACTGGGTGAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSRVEAGKMEGSWQQEVCPLPHR*YNWVNG Trigger: GCCATTCACCCAGTTATACAACCTGTGGGGCAGCGG...ACATACCTCCTGCTGCCAGGAGCCTTCCATCTTGCCAGCTTCTACCCGGGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CAA 90 bp | GCTGGCAAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTGGAGTGGGCCAGTGTCTCCTGCTGCTGACCTaGTTTCTGTCTTCACCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGKMEGSWQQEVCGVGQCLLLLT*FLSSPF Trigger: GAAGGGTGAAGACAGAAACAAGGTCAGCAGCAGGAG...ACACTGGCCCACTCCACATACCTCCTGCTGCCAGGAGCCTTCCATCTTGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CAA 90 bp | TGTGTAGCCCTGGCTGACCTAGAACTCACAGAGATCTACCTACATCTGCCTGCCCGGCTTGGGATGCATTaGTGTCCAGGCCTAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CVALADLELTEIYLHLPARLGMH*CPGLGS Trigger: GGAGCCTAGGCCTGGACACAAATGCATCCCAAGCCG...GGCAGGCAGATGTAGGTAGATCTCTGTGAGTTCTAGGTCAGCCAGGGCTACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CAA 90 bp | CTTTCCCGGGTAGAAGCTGGCAAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTTTCCAGCCTTTGCAGTaGTCTTGTGAATCTTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSRVEAGKMEGSWQQEVCFQPLQ*SCESCL Trigger: GAGACAAGATTCACAAGACAACTGCAAAGGCTGGAA...ACATACCTCCTGCTGCCAGGAGCCTTCCATCTTGCCAGCTTCTACCCGGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CAA 90 bp | TGTGTAGCCCTGGCTGACCTAGAACTCACAGAGATCTACCTACATCTGCCTGCCTGTCTTTGTTTCCACTaGCGGTCTCTTCAGGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: CVALADLELTEIYLHLPACLCFH*RSLQGR Trigger: TCTACCCTGAAGAGACCGCAAGTGGAAACAAAGACA...GGCAGGCAGATGTAGGTAGATCTCTGTGAGTTCTAGGTCAGCCAGGGCTACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CAA 90 bp | CAAGACGGAGCAAATCTGCATTGTTTCCTGGTGTGCTCGGGATGGCAGGCATCATGTCTTTGTTTCCACTaGCGGTCTCTTCAGGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: QDGANLHCFLVCSGWQASCLCFH*RSLQGR Trigger: TCTACCCTGAAGAGACCGCAAGTGGAAACAAAGACA...TGATGCCTGCCATCCCGAGCACACCAGGAAACAATGCAGATTTGCTCCGTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR CAA 90 bp | GTTAGCGTAGCTGGGGCTGCTGTTCCTCTCTGTCTGATGCTGTCCACTTTCATGTGTCTTTGTTTCCACTaGCGGTCTCTTCAGGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: VSVAGAAVPLCLMLSTFMCLCFH*RSLQGR Trigger: TCTACCCTGAAGAGACCGCAAGTGGAAACAAAGACA...CATGAAAGTGGACAGCATCAGACAGAGAGGAACAGCAGCCCCAGCTACGCTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132055.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCAGTGTCCTCGGAAAGTCCTAGTGACACACACTCCAGTGTCCAGACCGAAGCAAATTCTGTCTTaGTTTCCACTTGCGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLQCPRKVLVTHTPVSRPKQILS*FPLAVS Trigger: AGAGACCGCAAGTGGAAACAAAGACAGAATTTGCTT...CGGTCTGGACACTGGAGTGTGTGTCACTAGGACTTTCCGAGGACACTGCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR CAA 90 bp | GCTGGCAAGATGGAAGGCTCCTGGCAGCAGGAGGTATGTGGAGTGGGCCAGTGTAGGACTGAATTTATCTaGATGACGTCTGGATTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGKMEGSWQQEVCGVGQCRTEFI*MTSGFV Trigger: AACAAATCCAGACGTCATCAAGATAAATTCAGTCCT...ACACTGGCCCACTCCACATACCTCCTGCTGCCAGGAGCCTTCCATCTTGCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS CCA 90 bp | GTGACTTGCTGGAAGGTGCTTCCGCTGCCCCACAGGTTGTATAACTaGGTGAATGGCCCCAACAACATAGCCCTTAAGATAATAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VTCWKVLPLPHRLYN*VNGPNNIALKIIVF Trigger: GAAGACTATTATCTTAAGGGCTATGTTGTTGGGGCCATTCACCCAGTTATACAACCTGTGGGGCAGCGGAAGCACCTTCCAGCAAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027121.15 ENSMUST00000114428.3 |
||
| CDS-3UTR CAA 90 bp | CAGGAGGTATGTGGAGTGGGCCAGTGTTATAGACATCACATGGGCTGTGAGCCCAAGCAAATTCTGTCTTaGTTTCCACTTGCGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QEVCGVGQCYRHHMGCEPKQILS*FPLAVS Trigger: AGAGACCGCAAGTGGAAACAAAGACAGAATTTGCTT...GGGCTCACAGCCCATGTGATGTCTATAACACTGGCCCACTCCACATACCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CAA 90 bp | ACTGTAGTTCTTTTGGAGGTCAGTCTTTCATACCTAAATGAAGGCCCCTGTTCTCCCTGTACAGGTGACTaGCTGGAAGGTGCTTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: TVVLLEVSLSYLNEGPCSPCTGD*LEGASA Trigger: AGCGGAAGCACCTTCCAGCAAGTCACCTGTACAGGG...AGAACAGGGGCCTTCATTTAGGTATGAAAGACTGACCTCCAAAAGAACTACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CAA 90 bp | CACTGTGTAGCCCTGGCTGACCTAGAACTCACAGAGATCTACCTACATCTGCCTTTGGAGAAATACGACTaGCTTGGTAGCCAAATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HCVALADLELTEIYLHLPLEKYD*LGSQIP Trigger: GGGAATTTGGCTACCAAGCAAGTCGTATTTCTCCAA...AGGCAGATGTAGGTAGATCTCTGTGAGTTCTAGGTCAGCCAGGGCTACACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CAA 90 bp | TGTGTAGCCCTGGCTGACCTAGAACTCACAGAGATCTACCTACATCTGCCTGCCTCTTCCTCAAAAGCATaGAAGACCATGTACAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CVALADLELTEIYLHLPASSSKA*KTMYSL Trigger: TAAGCTGTACATGGTCTTCAATGCTTTTGAGGAAGA...GGCAGGCAGATGTAGGTAGATCTCTGTGAGTTCTAGGTCAGCCAGGGCTACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CAA 90 bp | ATAGACCATGGCTTTTATACATTGAGATTGTGGGCTCTCCTTTTAATGACTTTTCCTCCATCACAAGCCTaGCGCGCCTTTGTCCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IDHGFYTLRLWALLLMTFPPSQA*RAFVRL Trigger: CAGGCGGACAAAGGCGCGCAAGGCTTGTGATGGAGG...AAAAGTCATTAAAAGGAGAGCCCACAATCTCAATGTATAAAAGCCATGGTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CAA 90 bp | GGCAAAGATGGCGTGGAAGAATGTCTGAAAAGACATTCCAGCTGCACAAAGTGGTTCCAGCCTTTGCAGTaGTCTTGTGAATCTTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GKDGVEECLKRHSSCTKWFQPLQ*SCESCL Trigger: GAGACAAGATTCACAAGACAACTGCAAAGGCTGGAA...CCACTTTGTGCAGCTGGAATGTCTTTTCAGACATTCTTCCACGCCATCTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR CAA 90 bp | TTGTTTCCTGGTGTGCTCGGGATGGCAGGCATCAACTATTCAAAACAAAGAGTCGTCACTAACCGAAAGTaGGAATGCCTCCAACTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LFPGVLGMAGINYSKQRVVTNRK*ECLQLS Trigger: GCTAAGTTGGAGGCATTCCAACTTTCGGTTAGTGAC...GACTCTTTGTTTTGAATAGTTGATGCCTGCCATCCCGAGCACACCAGGAAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR CAA 90 bp | GGCAAAGATGGCGTGGAAGAATGTCTGAAAAGACATTCCAGCTGCACAAAGTGGAGGACTGAATTTATCTaGATGACGTCTGGATTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GKDGVEECLKRHSSCTKWRTEFI*MTSGFV Trigger: AACAAATCCAGACGTCATCAAGATAAATTCAGTCCT...CCACTTTGTGCAGCTGGAATGTCTTTTCAGACATTCTTCCACGCCATCTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR CAA 90 bp | CAACTATTCAAAACAAAGAGTCCAGTTCTGCCTCCTTCTTCACACTGCCTTCTCTCTTCCTCAAAAGCATaGAAGACCATGTACAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: QLFKTKSPVLPPSSHCLLSSSKA*KTMYSL Trigger: TAAGCTGTACATGGTCTTCAATGCTTTTGAGGAAGA...GAGAAGGCAGTGTGAAGAAGGAGGCAGAACTGGACTCTTTGTTTTGAATAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR CAA 90 bp | TTTCTCCATAGTCGTCTGATTTCTGACAATATTTGTGATGATGGCAGAAGCAAGCCTTCATTCCAGCCTTaGCAGTTGTCTTGTGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: FLHSRLISDNICDDGRSKPSFQP*QLSCES Trigger: AGATTCACAAGACAACTGCAAAGGCTGGAATGAAGG...CTTGCTTCTGCCATCATCACAAATATTGTCAGAAATCAGACGACTATGGAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
||
| CDS-3UTR CAA 90 bp | TTTCATAGACCATGGCTTTTATACATTGAGATTGTGGGCTCTCCTTTTAATGACCCTTCATTCCAGCCTTaGCAGTTGTCTTGTGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: FHRPWLLYIEIVGSPFNDPSFQP*QLSCES Trigger: AGATTCACAAGACAACTGCAAAGGCTGGAATGAAGG...GTCATTAAAAGGAGAGCCCACAATCTCAATGTATAAAAGCCATGGTCTATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
||
| CDS-3UTR CAA 90 bp | GTGAATTACTTAATGGCAGTCTACTGTAGTTCTTTTGGAGGTCAGTCTTTCATAAGAAATACGACTTGCTaGGTAGCCAAATTCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VNYLMAVYCSSFGGQSFIRNTTC*VAKFPS Trigger: TGAAGGGAATTTGGCTACCAAGCAAGTCGTATTTCT...TATGAAAGACTGACCTCCAAAAGAACTACAGTAGACTGCCATTAAGTAATTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027121.15 |
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| CDS CCA 72 bp | GCCTTGCGCGCCTTTGTCCGCCTGCTGCAGAATGCTTaGGGCTTAGCTTCAGCCGGGACAGCACCGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: ALRAFVRLLQNA*GLASAGTAPPC Trigger: ACAGGGCGGTGCTGTCCCGGCTGAAGCTAAGCCCCAAGCATTCTGCAGCAGGCGGACAAAGGCGCGCAAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027121.15 ENSMUST00000114428.3 |
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| CDS GCA 72 bp | ACAAGCCTTGCGCGCCTTTGTCCGCCTGCTGCAGAATaGTTGGGGCTTAGCTTCAGCCGGGACAGCACCGCC | + |
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Preference number: 6 (lower is better) Translates to: TSLARLCPPAAE*LGLSFSRDSTA Trigger: GGCGGTGCTGTCCCGGCTGAAGCTAAGCCCCAAGCATTCTGCAGCAGGCGGACAAAGGCGCGCAAGGCTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027121.15 ENSMUST00000114428.3 |
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| CDS TCA 72 bp | CTTAGCTTCAGCCGGGACAGCACCGCCCTGTACAGGTaGCTTGCTGGAAGGTGCTTCCGCTGCCCCACAGGT | + |
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Preference number: 6 (lower is better) Translates to: LSFSRDSTALYR*LAGRCFRCPTG Trigger: ACCTGTGGGGCAGCGGAAGCACCTTCCAGCAAGTCACCTGTACAGGGCGGTGCTGTCCCGGCTGAAGCTAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027121.15 ENSMUST00000114428.3 |
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| CDS CAA 72 bp | GCTTCAGCCGGGACAGCACCGCCCTGTACAGGTGACTaGCTGGAAGGTGCTTCCGCTGCCCCACAGGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: ASAGTAPPCTGD*LEGASAAPQVV Trigger: TACAACCTGTGGGGCAGCGGAAGCACCTTCCAGCAAGTCACCTGTACAGGGCGGTGCTGTCCCGGCTGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027121.15 ENSMUST00000114428.3 |
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| CDS GCA 72 bp | CTTCAGCCGGGACAGCACCGCCCTGTACAGGTGACTTaGTGGAAGGTGCTTCCGCTGCCCCACAGGTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: LQPGQHRPVQVT*WKVLPLPHRLY Trigger: ATACAACCTGTGGGGCAGCGGAAGCACCTTCCAGCAAGTCACCTGTACAGGGCGGTGCTGTCCCGGCTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027121.15 ENSMUST00000114428.3 |
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| CDS CCA 72 bp | CAGCCGGGACAGCACCGCCCTGTACAGGTGACTTGCTaGAAGGTGCTTCCGCTGCCCCACAGGTTGTATAAC | + |
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Preference number: 6 (lower is better) Translates to: QPGQHRPVQVTC*KVLPLPHRLYN Trigger: GTTATACAACCTGTGGGGCAGCGGAAGCACCTTCCAGCAAGTCACCTGTACAGGGCGGTGCTGTCCCGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027121.15 ENSMUST00000114428.3 |
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| CDS CAA 72 bp | GTGACTTGCTGGAAGGTGCTTCCGCTGCCCCACAGGTaGTATAACTGGGTGAATGGCCCCAACAACATAGCC | + |
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Preference number: 6 (lower is better) Translates to: VTCWKVLPLPHR*YNWVNGPNNIA Trigger: GGCTATGTTGTTGGGGCCATTCACCCAGTTATACAACCTGTGGGGCAGCGGAAGCACCTTCCAGCAAGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027121.15 ENSMUST00000114428.3 |
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| CDS CAA 90 bp | CCTGTACAGGTGACTTGCTGGAAGGTGCTTCCGCTGCCCCACAGGTaGTATAACTGGGTGAATGGCCCCAACAACATAGCCCTTAAGATA | + |
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Preference number: 6 (lower is better) Translates to: PVQVTCWKVLPLPHR*YNWVNGPNNIALKI Trigger: TATCTTAAGGGCTATGTTGTTGGGGCCATTCACCCAGTTATACAACCTGTGGGGCAGCGGAAGCACCTTCCAGCAAGTCACCTGTACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027121.15 ENSMUST00000114428.3 |
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| CDS CCA 72 bp | TGGAAGGTGCTTCCGCTGCCCCACAGGTTGTATAACTaGGTGAATGGCCCCAACAACATAGCCCTTAAGATA | + |
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Preference number: 6 (lower is better) Translates to: WKVLPLPHRLYN*VNGPNNIALKI Trigger: TATCTTAAGGGCTATGTTGTTGGGGCCATTCACCCAGTTATACAACCTGTGGGGCAGCGGAAGCACCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027121.15 ENSMUST00000114428.3 |
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| CDS CAA 90 bp | ACCAGCCCAACAAACTTCATCCCTCTTTTAGCAGCGGCATTAATCTaGTCCATGAGTTCCTTTGCAGCGTCGTTTGCTTGTGCCTCACAA | + |
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Preference number: 6 (lower is better) Translates to: TSPTNFIPLLAAALI*SMSSFAASFACASQ Trigger: TTGTGAGGCACAAGCAAACGACGCTGCAAAGGAACTCATGGACAAGATTAATGCCGCTGCTAAAAGAGGGATGAAGTTTGTTGGGCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027121.15 ENSMUST00000114428.3 |
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| CDS CAA 72 bp | TTGCTTTCCCTTAGGCAGTTTGTCACTAACCGAAAGTaGGAATGCCTCCAACTTAGCCACTTTAGGTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LLSLRQFVTNRK*ECLQLSHFRCL Trigger: GAGACACCTAAAGTGGCTAAGTTGGAGGCATTCCAACTTTCGGTTAGTGACAAACTGCCTAAGGGAAAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
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| CDS CAA 90 bp | AGAATATTTTTGCTTTCCCTTAGGCAGTTTGTCACTAACCGAAAGTaGGAATGCCTCCAACTTAGCCACTTTAGGTGTCTCCCAGCACAC | + |
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Preference number: 6 (lower is better) Translates to: RIFLLSLRQFVTNRK*ECLQLSHFRCLPAH Trigger: GTGTGCTGGGAGACACCTAAAGTGGCTAAGTTGGAGGCATTCCAACTTTCGGTTAGTGACAAACTGCCTAAGGGAAAGCAAAAATATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114428.3 |
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| CDS CAA 72 bp | ACAAACTTCATCCCTCTTTTAGCAGCGGCATTAATCTaGTCCATGAGTTCCTTTGCAGCGTCGTTTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: TNFIPLLAAALI*SMSSFAASFAC Trigger: ACAAGCAAACGACGCTGCAAAGGAACTCATGGACAAGATTAATGCCGCTGCTAAAAGAGGGATGAAGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027121.15 ENSMUST00000114428.3 |
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