Pregenerated sensors for RFTN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039316Ensembl transcript IDs: ENSMUST00000044503.14, ENSMUST00000113195.8
Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATGTGCCCTGGAGTCCTGTGGGGCAGTACAGGCACTATGGTCCATaGCCTTCCTTGTGGAAGAGGCGGACCAGAGTCGGGCCTCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: DVPWSPVGQYRHYGP*PSLWKRRTRVGPPA Trigger: GGCTGGAGGCCCGACTCTGGTCCGCCTCTTCCACAAGGAAGGGCATGGACCATAGTGCCTGTACTGCCCCACAGGACTCCAGGGCACATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR CCA 90 bp | TGGTTTGTAGCAAAGGATGTCCCAGAAGTTGACCCAGATGTGCCCTaGAGTCCTGTGGGGCAGTACAGGCACTATGGTCCATGCCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: WFVAKDVPEVDPDVP*SPVGQYRHYGPCPS Trigger: GGAAGGGCATGGACCATAGTGCCTGTACTGCCCCACAGGACTCCAGGGCACATCTGGGTCAACTTCTGGGACATCCTTTGCTACAAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR GCA 90 bp | GGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCACTATGTTCTTaGCCAGAGCAGCAGCATGTAGGAGTGAGCAGAAAAACCTTGGTT | + |
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Preference number: 1 (lower is better) Translates to: GKASRQAAGLMSLCS*PEQQHVGVSRKTLV Trigger: AACCAAGGTTTTTCTGCTCACTCCTACATGCTGCTGCTCTGGGCAAGAACATAGTGACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR TCA 90 bp | GTGAGCAGAAAAACCTTGGTTTGTAGCAAAGGATGTCCCAGAAGTTaGCCCAGATGTGCCCTGGAGTCCTGTGGGGCAGTACAGGCACTA | + |
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Preference number: 1 (lower is better) Translates to: VSRKTLVCSKGCPRS*PRCALESCGAVQAL Trigger: TAGTGCCTGTACTGCCCCACAGGACTCCAGGGCACATCTGGGTCAACTTCTGGGACATCCTTTGCTACAAACCAAGGTTTTTCTGCTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR TCA 90 bp | TCTACCACACTGGCAGGAGGTAAAAATGTAATCGTCACCAGGAGGTaGAGGGTTGACACCATGCTGGGGCCTCTGCCAGGTCATGGTAAA | + |
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Preference number: 1 (lower is better) Translates to: STTLAGGKNVIVTRR*RVDTMLGPLPGHGK Trigger: TTTACCATGACCTGGCAGAGGCCCCAGCATGGTGTCAACCCTTCACCTCCTGGTGACGATTACATTTTTACCTCCTGCCAGTGTGGTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| 3UTR GCA 90 bp | CAGGGCTGTTTCCATCGAGACAACTGGTGTTCTCGCTCCATGGTTTaGCAGATGCTTCTACTTAAAGCCTTAACAACACGTTATGGACAG | + |
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Preference number: 1 (lower is better) Translates to: QGCFHRDNWCSRSMV*QMLLLKALTTRYGQ Trigger: CTGTCCATAACGTGTTGTTAAGGCTTTAAGTAGAAGCATCTGGCAAACCATGGAGCGAGAACACCAGTTGTCTCGATGGAAACAGCCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR TCA 90 bp | GTTGTTGCTGTTAACTGCCTCAGTTTTTCTAATGTACAGCTAGTTTaGGAACTTCTATGCTACAGTGACATCTTGTCAGAACCATCAGGG | + |
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Preference number: 1 (lower is better) Translates to: VVAVNCLSFSNVQLV*ELLCYSDILSEPSG Trigger: CCCTGATGGTTCTGACAAGATGTCACTGTAGCATAGAAGTTCTCAAACTAGCTGTACATTAGAAAAACTGAGGCAGTTAACAGCAACAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| 3UTR-3UTR TCA 90 bp | CCACAACAGCAGGGTCTCCAGAGCTCAGGTGGGGAAGGCCAGCCGGCAGGCTGCTCGGGCCTCCAGCCCTaGGGTCTGGGAGGAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: PQQQGLQSSGGEGQPAGCSGLQP*GLGGTG Trigger: GCCTGTTCCTCCCAGACCTCAGGGCTGGAGGCCCGA...GCAGCCTGCCGGCTGGCCTTCCCCACCTGAGCTCTGGAGACCCTGCTGTTGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGCAGTACAGGCACTATGGTCCATGCCCTTCCTTGTGGAAGAGGCGGACCTCGGGCCTCCAGCCCTaGGGTCTGGGAGGAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: VGQYRHYGPCPSLWKRRTSGLQP*GLGGTG Trigger: GCCTGTTCCTCCCAGACCTCAGGGCTGGAGGCCCGA...GGTCCGCCTCTTCCACAAGGAAGGGCATGGACCATAGTGCCTGTACTGCCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGCTGAGTGGCTGAAGCCATCTGGTCTGGGAGGCTGCCAACCATCAGTCACCTCTCCAGAGCTCAGGTaGGGAAGGCCAGCCGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: KAEWLKPSGLGGCQPSVTSPELR*GRPAGR Trigger: CCTGCCGGCTGGCCTTCCCCACCTGAGCTCTGGAGA...GGTGACTGATGGTTGGCAGCCTCCCAGACCAGATGGCTTCAGCCACTCAGCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| 3UTR-3UTR GCA 90 bp | GGTCTCCAGAGCTCAGGTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCGCTTTCCAGTGGATGTaGAGAAAACAACACCATCAG | + |
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Preference number: 2 (lower is better) Translates to: GLQSSGGEGQPAGCRVNVAFQWM*RKQHHQ Trigger: CTGATGGTGTTGTTTTCTGCACATCCACTGGAAAGC...GACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCACCTGAGCTCTGGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCCTTGTGGAAGAGGCGGACCAGAGTCGGGCCTCCAGCCCTGAGGTCTGGAAGACAGCTTTCCAGTaGATGTGCAGAAAACAACAC | + |
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Preference number: 2 (lower is better) Translates to: PFLVEEADQSRASSPEVWKTAFQ*MCRKQH Trigger: GTGTTGTTTTCTGCACATCCACTGGAAAGCTGTCTT...CCAGACCTCAGGGCTGGAGGCCCGACTCTGGTCCGCCTCTTCCACAAGGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR CAA 90 bp | GGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCACTATGTTCTaGCCCAGAGCAGCAGCATGTAGGAGTGAGCAGAAAAACCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: GEGQPAGCRVNVTMF*PRAAACRSEQKNLG Trigger: ACCAAGGTTTTTCTGCTCACTCCTACATGCTGCTGCTCTGGGCAAGAACATAGTGACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR CAA 90 bp | TTAAGACAGGCAGGAGGCTTGGGTACCTCCTATTCTCCAACATCCTaGCCTTCCACAACAGCAGGGTCTCCAGAGCTCAGGTGGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LRQAGGLGTSYSPTS*PSTTAGSPELRWGR Trigger: CCTTCCCCACCTGAGCTCTGGAGACCCTGCTGTTGTGGAAGGCAAGGATGTTGGAGAATAGGAGGTACCCAAGCCTCCTGCCTGTCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR-3UTR GCA 90 bp | CTTAAGACAGGCAGGAGGCTTGGGTACCTCCTATTCTCCAACATCCTTGCCTTCAAGTTGACCCAGATGTaGCCTGGAGTCCTGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: LKTGRRLGYLLFSNILAFKLTQM*PGVLWG Trigger: GCCCCACAGGACTCCAGGGCACATCTGGGTCAACTT...GAAGGCAAGGATGTTGGAGAATAGGAGGTACCCAAGCCTCCTGCCTGTCTTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR-3UTR CCA 90 bp | CTTAAGACAGGCAGGAGGCTTGGGTACCTCCTATTCTCCAACATCCTTGCCTTCTGCCCTGGAGTCCTGTaGGGCAGTACAGGCACTATG | + |
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Preference number: 2 (lower is better) Translates to: LKTGRRLGYLLFSNILAFCPGVL*GSTGTM Trigger: CATAGTGCCTGTACTGCCCCACAGGACTCCAGGGCA...GAAGGCAAGGATGTTGGAGAATAGGAGGTACCCAAGCCTCCTGCCTGTCTTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR-3UTR TCA 90 bp | AGAACTACCTTAAGACAGGCAGGAGGCTTGGGTACCTCCTATTCTCCAACATCCGGATGTCCCAGAAGTTaGCCCAGATGTGCCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RTTLRQAGGLGTSYSPTSGCPRS*PRCALE Trigger: CTCCAGGGCACATCTGGGTCAACTTCTGGGACATCC...GGATGTTGGAGAATAGGAGGTACCCAAGCCTCCTGCCTGTCTTAAGGTAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCACTATGTTCTTGCCCAGCTTTCCAGTGGATGTaGAGAAAACAACACCATCAG | + |
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Preference number: 2 (lower is better) Translates to: VGKASRQAAGLMSLCSCPAFQWM*RKQHHQ Trigger: CTGATGGTGTTGTTTTCTGCACATCCACTGGAAAGC...TGGGCAAGAACATAGTGACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR-3UTR CCA 90 bp | AGAACTACCTTAAGACAGGCAGGAGGCTTGGGTACCTCCTATTCTCCAACATCCTGCCCTGGAGTCCTGTaGGGCAGTACAGGCACTATG | + |
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Preference number: 2 (lower is better) Translates to: RTTLRQAGGLGTSYSPTSCPGVL*GSTGTM Trigger: CATAGTGCCTGTACTGCCCCACAGGACTCCAGGGCA...GGATGTTGGAGAATAGGAGGTACCCAAGCCTCCTGCCTGTCTTAAGGTAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR CAA 90 bp | AGAGTCGGGCCTCCAGCCCTGAGGTCTGGGAGGAACAGGCCAACTTaGCACTCTAAAAGAAGTGGATCATTAAGACAGCTTTCCAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: RVGPPALRSGRNRPT*HSKRSGSLRQLSSG Trigger: TCCACTGGAAAGCTGTCTTAATGATCCACTTCTTTTAGAGTGCAAAGTTGGCCTGTTCCTCCCAGACCTCAGGGCTGGAGGCCCGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCACTATGTTCTTGCCCAGGAACAGGCCAACTTTaGACTCTAAAAGAAGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: VGKASRQAAGLMSLCSCPGTGQL*TLKEVD Trigger: ATCCACTTCTTTTAGAGTGCAAAGTTGGCCTGTTCC...TGGGCAAGAACATAGTGACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTGTTCTCGCTCCATGGTTTGCCAGATGCTTCTACTTAAAGCCTTAACAACACGCTCACGGGGCCAATaGGCTAACAATGGGAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: WCSRSMVCQMLLLKALTTRSRGQ*ANNGRS Trigger: TGACCTCCCATTGTTAGCTCATTGGCCCCGTGAGCG...TGTTGTTAAGGCTTTAAGTAGAAGCATCTGGCAAACCATGGAGCGAGAACACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGACATCTTGTCAGAACCATCAGGGTGTGTGGGAGGGGAAAAGAGTAAGTCCATGCTGGGGCCTCTaGCAGGTCATGGTAAATACT | + |
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Preference number: 2 (lower is better) Translates to: TVTSCQNHQGVWEGKRVSPCWGL*QVMVNT Trigger: AGTATTTACCATGACCTGGCAGAGGCCCCAGCATGG...ACTTACTCTTTTCCCCTCCCACACACCCTGATGGTTCTGACAAGATGTCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| 3UTR-3UTR CCA 90 bp | CCTGTTTGTTTCCAGATCACCAGTATCTATAGAACTACCTTAAGACAGGCAGGAGACCCAGATGTGCCCTaGAGTCCTGTGGGGCAGTAC | + |
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Preference number: 2 (lower is better) Translates to: PVCFQITSIYRTTLRQAGDPDVP*SPVGQY Trigger: GTACTGCCCCACAGGACTCCAGGGCACATCTGGGTC...TCCTGCCTGTCTTAAGGTAGTTCTATAGATACTGGTGATCTGGAAACAAACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTGGATCATTAAGACAGCTTTCCAGTGGATGTGCAGAAAACAACACCATCAGCGCTCACGGGGCCAATaGGCTAACAATGGGAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: KWIIKTAFQWMCRKQHHQRSRGQ*ANNGRS Trigger: TGACCTCCCATTGTTAGCTCATTGGCCCCGTGAGCG...CTGATGGTGTTGTTTTCTGCACATCCACTGGAAAGCTGTCTTAATGATCCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR CAA 90 bp | CAGATCACCAGTATCTATAGAACTACCTTAAGACAGGCAGGAGGCTaGGGTACCTCCTATTCTCCAACATCCTTGCCTTCCACAACAGCA | + |
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Preference number: 2 (lower is better) Translates to: QITSIYRTTLRQAGG*GTSYSPTSLPSTTA Trigger: TGCTGTTGTGGAAGGCAAGGATGTTGGAGAATAGGAGGTACCCAAGCCTCCTGCCTGTCTTAAGGTAGTTCTATAGATACTGGTGATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR-3UTR CCA 90 bp | TTGACACCATGCTGGGGCCTCTGCCAGGTCATGGTAAATACTTCTCACCACACAAAGACAGCTTTCCAGTaGATGTGCAGAAAACAACAC | + |
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Preference number: 2 (lower is better) Translates to: LTPCWGLCQVMVNTSHHTKTAFQ*MCRKQH Trigger: GTGTTGTTTTCTGCACATCCACTGGAAAGCTGTCTT...TGTGTGGTGAGAAGTATTTACCATGACCTGGCAGAGGCCCCAGCATGGTGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| 3UTR-3UTR TCA 90 bp | GAACTTCTATGCTACAGTGACATCTTGTCAGAACCATCAGGGTGTGTGGGAGGGCTTTTTAGCAAAGCTTaGAACCCTGGTATGTTTAGG | + |
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Preference number: 2 (lower is better) Translates to: ELLCYSDILSEPSGCVGGLFSKA*NPGMFR Trigger: CCTAAACATACCAGGGTTTCAAGCTTTGCTAAAAAG...CCCTCCCACACACCCTGATGGTTCTGACAAGATGTCACTGTAGCATAGAAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| 3UTR-3UTR GCA 90 bp | TTGTTTGATAGCCTGATACTGGCACAGCACCCTGAAATCATTTTAAAAATTTCCGGAACAGGCCAACTTTaGACTCTAAAAGAAGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: LFDSLILAQHPEIILKISGTGQL*TLKEVD Trigger: ATCCACTTCTTTTAGAGTGCAAAGTTGGCCTGTTCC...GGAAATTTTTAAAATGATTTCAGGGTGCTGTGCCAGTATCAGGCTATCAAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| 3UTR-3UTR CAA 90 bp | CCACAACAGCAGGGTCTCCAGAGCTCAGGTGGGGAAGGCCAGCCGGCAGGCTGCAGGATGTCCCAGAAGTaGACCCAGATGTGCCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: PQQQGLQSSGGEGQPAGCRMSQK*TQMCPG Trigger: TCCAGGGCACATCTGGGTCAACTTCTGGGACATCCT...GCAGCCTGCCGGCTGGCCTTCCCCACCTGAGCTCTGGAGACCCTGCTGTTGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR GCA 72 bp | TGGAGTCCTGTGGGGCAGTACAGGCACTATGGTCCATaGCCTTCCTTGTGGAAGAGGCGGACCAGAGTCGGG | + |
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Preference number: 3 (lower is better) Translates to: WSPVGQYRHYGP*PSLWKRRTRVG Trigger: CCCGACTCTGGTCCGCCTCTTCCACAAGGAAGGGCATGGACCATAGTGCCTGTACTGCCCCACAGGACTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR CCA 72 bp | TGTGCCCTGGAGTCCTGTGGGGCAGTACAGGCACTATaGTCCATGCCCTTCCTTGTGGAAGAGGCGGACCAG | + |
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Preference number: 3 (lower is better) Translates to: CALESCGAVQAL*SMPFLVEEADQ Trigger: CTGGTCCGCCTCTTCCACAAGGAAGGGCATGGACCATAGTGCCTGTACTGCCCCACAGGACTCCAGGGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGCTGAGTGGCTGAAGCCATCTGGTCTGGGAGGCTGCCAACCATCAGTCACCCCAGGAGGTGAAGGGTaGACACCATGCTGGGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: KAEWLKPSGLGGCQPSVTPGGEG*TPCWGL Trigger: GAGGCCCCAGCATGGTGTCAACCCTTCACCTCCTGG...GGTGACTGATGGTTGGCAGCCTCCCAGACCAGATGGCTTCAGCCACTCAGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| 3UTR GCA 72 bp | CTCCAGAGCTCAGGTGGGGAAGGCCAGCCGGCAGGCTaGAGGGTTAATGTCACTATGTTCTTGCCCAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: LQSSGGEGQPAG*RVNVTMFLPRA Trigger: TGCTCTGGGCAAGAACATAGTGACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCACCTGAGCTCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR TCA 72 bp | GGCTGCCAACCATCAGTCACCCCAGCTCCAGGGATCTaGCACCCTTCTCTGACATCAGCAGGCTTCAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: GCQPSVTPAPGI*HPSLTSAGFRH Trigger: ATGCCTGAAGCCTGCTGATGTCAGAGAAGGGTGTCAGATCCCTGGAGCTGGGGTGACTGATGGTTGGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| 3UTR CCA 72 bp | TCCCAGAAGTTGACCCAGATGTGCCCTGGAGTCCTGTaGGGCAGTACAGGCACTATGGTCCATGCCCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: SQKLTQMCPGVL*GSTGTMVHALP Trigger: AGGAAGGGCATGGACCATAGTGCCTGTACTGCCCCACAGGACTCCAGGGCACATCTGGGTCAACTTCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR CCA 72 bp | GCAAAGGATGTCCCAGAAGTTGACCCAGATGTGCCCTaGAGTCCTGTGGGGCAGTACAGGCACTATGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: AKDVPEVDPDVP*SPVGQYRHYGP Trigger: TGGACCATAGTGCCTGTACTGCCCCACAGGACTCCAGGGCACATCTGGGTCAACTTCTGGGACATCCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR TCA 72 bp | CTGGCAGGAGGTAAAAATGTAATCGTCACCAGGAGGTaGAGGGTTGACACCATGCTGGGGCCTCTGCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: LAGGKNVIVTRR*RVDTMLGPLPG Trigger: ACCTGGCAGAGGCCCCAGCATGGTGTCAACCCTTCACCTCCTGGTGACGATTACATTTTTACCTCCTGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| 3UTR GCA 72 bp | AGCCGGCAGGCTGCAGGGTTAATGTCACTATGTTCTTaGCCAGAGCAGCAGCATGTAGGAGTGAGCAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: SRQAAGLMSLCS*PEQQHVGVSRK Trigger: TTTTCTGCTCACTCCTACATGCTGCTGCTCTGGGCAAGAACATAGTGACATTAACCCTGCAGCCTGCCGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR TCA 72 bp | AAAACCTTGGTTTGTAGCAAAGGATGTCCCAGAAGTTaGCCCAGATGTGCCCTGGAGTCCTGTGGGGCAGTA | + |
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Preference number: 3 (lower is better) Translates to: KTLVCSKGCPRS*PRCALESCGAV Trigger: TACTGCCCCACAGGACTCCAGGGCACATCTGGGTCAACTTCTGGGACATCCTTTGCTACAAACCAAGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR GCA 72 bp | TTCTCTGACATCAGCAGGCTTCAGGCATCAGACTGGTaGACAGACATATATGCAGGGAAACCACCCATACGC | + |
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Preference number: 3 (lower is better) Translates to: FSDISRLQASDW*TDIYAGKPPIR Trigger: GCGTATGGGTGGTTTCCCTGCATATATGTCTGTGCACCAGTCTGATGCCTGAAGCCTGCTGATGTCAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| 3UTR CCA 72 bp | CCCTTCTCTGACATCAGCAGGCTTCAGGCATCAGACTaGTGCACAGACATATATGCAGGGAAACCACCCATA | + |
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Preference number: 3 (lower is better) Translates to: PFSDISRLQASD*CTDIYAGKPPI Trigger: TATGGGTGGTTTCCCTGCATATATGTCTGTGCACCAGTCTGATGCCTGAAGCCTGCTGATGTCAGAGAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| 3UTR-3UTR CAA 90 bp | CCTGTTTGTTTCCAGATCACCAGTATCTATAGAACTACCTTAAGACAGGCAGGAGGTCCATGCCCTTCCTaGTGGAAGAGGCGGACCAGA | + |
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Preference number: 3 (lower is better) Translates to: PVCFQITSIYRTTLRQAGGPCPS*WKRRTR Trigger: TCTGGTCCGCCTCTTCCACAAGGAAGGGCATGGACC...TCCTGCCTGTCTTAAGGTAGTTCTATAGATACTGGTGATCTGGAAACAAACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR-3UTR CAA 90 bp | CTTAAGACAGGCAGGAGGCTTGGGTACCTCCTATTCTCCAACATCCTTGCCTTCAATGTCACTATGTTCTaGCCCAGAGCAGCAGCATGT | + |
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Preference number: 3 (lower is better) Translates to: LKTGRRLGYLLFSNILAFNVTMF*PRAAAC Trigger: ACATGCTGCTGCTCTGGGCAAGAACATAGTGACATT...GAAGGCAAGGATGTTGGAGAATAGGAGGTACCCAAGCCTCCTGCCTGTCTTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR GCA 72 bp | AAGAAGTGGATCATTAAGACAGCTTTCCAGTGGATGTaGAGAAAACAACACCATCAGAGACCCGCGCTCACG | + |
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Preference number: 3 (lower is better) Translates to: KKWIIKTAFQWM*RKQHHQRPALT Trigger: CGTGAGCGCGGGTCTCTGATGGTGTTGTTTTCTGCACATCCACTGGAAAGCTGTCTTAATGATCCACTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| 3UTR CCA 72 bp | ACAAGAAAGAGACAGGGCTGTTTCCATCGAGACAACTaGTGTTCTCGCTCCATGGTTTGCCAGATGCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: TRKRQGCFHRDN*CSRSMVCQMLL Trigger: TAGAAGCATCTGGCAAACCATGGAGCGAGAACACCAGTTGTCTCGATGGAAACAGCCCTGTCTCTTTCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAACTACCTTAAGACAGGCAGGAGGCTTGGGTACCTCCTATTCTCCAACATCCAGGAACAGGCCAACTTaGCACTCTAAAAGAAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RTTLRQAGGLGTSYSPTSRNRPT*HSKRSG Trigger: TCCACTTCTTTTAGAGTGCAAAGTTGGCCTGTTCCT...GGATGTTGGAGAATAGGAGGTACCCAAGCCTCCTGCCTGTCTTAAGGTAGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| 3UTR GCA 72 bp | TTCCATCGAGACAACTGGTGTTCTCGCTCCATGGTTTaGCAGATGCTTCTACTTAAAGCCTTAACAACACGT | + |
|
Preference number: 3 (lower is better) Translates to: FHRDNWCSRSMV*QMLLLKALTTR Trigger: ACGTGTTGTTAAGGCTTTAAGTAGAAGCATCTGGCAAACCATGGAGCGAGAACACCAGTTGTCTCGATGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| 3UTR TCA 72 bp | AGCACACAAGGGCACCCAGTTACCAACTGCTCAAAATaGCAACATATTCATACATGTGTTGAAGACAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: STQGHPVTNCSK*QHIHTCVEDKI Trigger: AATTTTGTCTTCAACACATGTATGAATATGTTGTCATTTTGAGCAGTTGGTAACTGGGTGCCCTTGTGTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTCCAGAGCTCAGGTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCCAGGCTGCTGGGCACTaGGCACGTCCCCTGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GLQSSGGEGQPAGCRVNVQAAGH*ARPLWI Trigger: GATCCACAGGGGACGTGCCCAGTGCCCAGCAGCCTG...GACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCACCTGAGCTCTGGAGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR GCA 90 bp | GGTCTCCAGAGCTCAGGTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCCCAGCGGGACCATTCTaGACAGCTGCTGAGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLQSSGGEGQPAGCRVNVPAGPF*TAAEPC Trigger: GCAGGGCTCAGCAGCTGTGCAGAATGGTCCCGCTGG...GACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCACCTGAGCTCTGGAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAAGAGGCGGACCAGAGTCGGGCCTCCAGCCCTGAGGTCTGGGAGGAACAGACCGAGTCCCTGTTGTaGCCAGCGGGACCATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VEEADQSRASSPEVWEEQTESLL*PAGPFC Trigger: GCAGAATGGTCCCGCTGGCCACAACAGGGACTCGGT...CTGTTCCTCCCAGACCTCAGGGCTGGAGGCCCGACTCTGGTCCGCCTCTTCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTCGGGCCTCCAGCCCTGAGGTCTGGGAGGAACAGGCCAACTTTGCACTCTCCTGCCTTTGCTCCCTaGCCTCAGAGGCTCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVGPPALRSGRNRPTLHSPAFAP*PQRLCP Trigger: GGGGCAGAGCCTCTGAGGTCAGGGAGCAAAGGCAGG...AGAGTGCAAAGTTGGCCTGTTCCTCCCAGACCTCAGGGCTGGAGGCCCGACTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTCGGGCCTCCAGCCCTGAGGTCTGGGAGGAACAGGCCAACTTTGCACTCTGGAATGCCAGGCTGCTaGGCACTGGGCACGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVGPPALRSGRNRPTLHSGMPGC*ALGTSP Trigger: AGGGGACGTGCCCAGTGCCCAGCAGCCTGGCATTCC...AGAGTGCAAAGTTGGCCTGTTCCTCCCAGACCTCAGGGCTGGAGGCCCGACTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CCA 90 bp | CCACAACAGCAGGGTCTCCAGAGCTCAGGTGGGGAAGGCCAGCCGGCAGGCTGCAGACTGCTCACTGTCTaGCCGTTCTTGGAGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQQQGLQSSGGEGQPAGCRLLTV*PFLETW Trigger: CCAGGTCTCCAAGAACGGCCAGACAGTGAGCAGTCT...GCAGCCTGCCGGCTGGCCTTCCCCACCTGAGCTCTGGAGACCCTGCTGTTGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR TCA 90 bp | TCAGGTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCACTATGTTCTTGACGCCGGCTGCCTGCTaGGCTCACCGAGGGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGGEGQPAGCRVNVTMFLTPAAC*AHRGLV Trigger: TACCAGCCCTCGGTGAGCTCAGCAGGCAGCCGGCGT...CAAGAACATAGTGACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCACCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR TCA 90 bp | GGTCTCCAGAGCTCAGGTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCATTCTGCACAGCTGCTaGGCCCTGCCTTTGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLQSSGGEGQPAGCRVNVILHSC*ALPLLP Trigger: AGGGAGCAAAGGCAGGGCTCAGCAGCTGTGCAGAAT...GACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCACCTGAGCTCTGGAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTCCTTGTGGAAGAGGCGGACCAGAGTCGGGCCTCCAGCCCTGAGGTCTGGTCTTCGGTTCACTCCTaGAGTGGCAGCATCCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PFLVEEADQSRASSPEVWSSVHS*SGSIRL Trigger: GAGACGGATGCTGCCACTGCAGGAGTGAACCGAAGA...CCAGACCTCAGGGCTGGAGGCCCGACTCTGGTCCGCCTCTTCCACAAGGAAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR GCA 90 bp | TGGAGTCCTGTGGGGCAGTACAGGCACTATGGTCCATGCCCTTCCTTGTGGAAGGAGGCTCTGCCCCACTaGGGTGCCCCCAGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: WSPVGQYRHYGPCPSLWKEALPH*GAPSTQ Trigger: CTGTGTGCTGGGGGCACCGCAGTGGGGCAGAGCCTC...CTTCCACAAGGAAGGGCATGGACCATAGTGCCTGTACTGCCCCACAGGACTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGGATGTGCAGAAAACAACACCATCAGAGACCCGCGCTCACGGGGCCAATGGAGGCTCTGCCCCACTaGGGTGCCCCCAGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: QWMCRKQHHQRPALTGPMEALPH*GAPSTQ Trigger: CTGTGTGCTGGGGGCACCGCAGTGGGGCAGAGCCTC...CATTGGCCCCGTGAGCGCGGGTCTCTGATGGTGTTGTTTTCTGCACATCCACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTCCAGAGCTCAGGTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCTTGGCCATGCCAAGCTaGAAGACGGCGTTCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLQSSGGEGQPAGCRVNVLAMPS*KTAFTS Trigger: GCTGGTGAACGCCGTCTTCCAGCTTGGCATGGCCAA...GACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCACCTGAGCTCTGGAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTCGGGCCTCCAGCCCTGAGGTCTGGGAGGAACAGGCCAACTTTGCACTCTGCCAGCCTCATTCTCTaGCGAGGGAGAGGGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVGPPALRSGRNRPTLHSASLIL*RGRGNA Trigger: GGCATTCCCTCTCCCTCGGCAGAGAATGAGGCTGGC...AGAGTGCAAAGTTGGCCTGTTCCTCCCAGACCTCAGGGCTGGAGGCCCGACTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR TCA 90 bp | GTGGAAGAGGCGGACCAGAGTCGGGCCTCCAGCCCTGAGGTCTGGGAGGAACAGGGCTCTTCGGTCTGTTaGAAAAGGCGAAGATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VEEADQSRASSPEVWEEQGSSVC*KRRRSP Trigger: TGGAGATCTTCGCCTTTTTCAACAGACCGAAGAGCC...CTGTTCCTCCCAGACCTCAGGGCTGGAGGCCCGACTCTGGTCCGCCTCTTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR TCA 90 bp | TCAGGTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCACTATGTTCTTGTTGGCAGCACACAGGTaGGCTGCCATCCGTAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGGEGQPAGCRVNVTMFLLAAHR*AAIRRP Trigger: CGGCCTACGGATGGCAGCTCACCTGTGTGCTGCCAA...CAAGAACATAGTGACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCACCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTCGGGCCTCCAGCCCTGAGGTCTGGGAGGAACAGGCCAACTTTGCACTCTACAGCTGCTGAGCCCTaGCTTTGCTCCCTGACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVGPPALRSGRNRPTLHSTAAEP*LCSLTS Trigger: TGAGGTCAGGGAGCAAAGGCAGGGCTCAGCAGCTGT...AGAGTGCAAAGTTGGCCTGTTCCTCCCAGACCTCAGGGCTGGAGGCCCGACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCAGTACAGGCACTATGGTCCATGCCCTTCCTTGTGGAAGAGGCGGACCAGACAGCTGCTGAGCCCTaGCTTTGCTCCCTGACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GAVQALWSMPFLVEEADQTAAEP*LCSLTS Trigger: TGAGGTCAGGGAGCAAAGGCAGGGCTCAGCAGCTGT...CTGGTCCGCCTCTTCCACAAGGAAGGGCATGGACCATAGTGCCTGTACTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCACTATGTTCTTGTGTTGGAGTGGGGCCTaGAGCAAGCTCAGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGGEGQPAGCRVNVTMFLCWSGA*SKLSLS Trigger: GCTGAGGCTGAGCTTGCTGCAGGCCCCACTCCAACA...CAAGAACATAGTGACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCACCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGGCGGACCAGAGTCGGGCCTCCAGCCCTGAGGTCTGGGAGGAACAGGCCACGTCATAGCCCTGTGTaGTTCTGTTATCTTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRRTRVGPPALRSGRNRPRHSPV*FCYLLW Trigger: CCACAGAAGATAACAGAACCACACAGGGCTATGACG...TGGCCTGTTCCTCCCAGACCTCAGGGCTGGAGGCCCGACTCTGGTCCGCCTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGGCGGACCAGAGTCGGGCCTCCAGCCCTGAGGTCTGGGAGGAACAGGCCACCAGCCTTGGAGAACTaGTCTTCCAGATTCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KRRTRVGPPALRSGRNRPPALEN*SSRFFS Trigger: TGAGAAGAATCTGGAAGACCAGTTCTCCAAGGCTGG...TGGCCTGTTCCTCCCAGACCTCAGGGCTGGAGGCCCGACTCTGGTCCGCCTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR TCA 90 bp | TCAGGTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCACTATGTTCTTGATTCTGCACAGCTGCTaGGCCCTGCCTTTGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGGEGQPAGCRVNVTMFLILHSC*ALPLLP Trigger: AGGGAGCAAAGGCAGGGCTCAGCAGCTGTGCAGAAT...CAAGAACATAGTGACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCACCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | TTGACACCATGCTGGGGCCTCTGCCAGGTCATGGTAAATACTTCTCACCACACAGAGGGAATGCCAGGCTaGTGGGCACTGGGCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTPCWGLCQVMVNTSHHTEGMPG*WALGTS Trigger: GGACGTGCCCAGTGCCCAGCAGCCTGGCATTCCCTC...TGTGTGGTGAGAAGTATTTACCATGACCTGGCAGAGGCCCCAGCATGGTGTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR GCA 90 bp | GGTCTCCAGAGCTCAGGTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCCTTCTCATTCTCTTCTaGTTGCTGCTTGTTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLQSSGGEGQPAGCRVNVLLILF*LLLVAG Trigger: GCCAGCAACAAGCAGCAAGCAGAAGAGAATGAGAAG...GACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCACCTGAGCTCTGGAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGGATGTGCAGAAAACAACACCATCAGAGACCCGCGCTCACGGGGCCAATGGGTTCACTCCTGCAGTaGCAGCATCCGTCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QWMCRKQHHQRPALTGPMGSLLQ*QHPSLQ Trigger: CTGCAGAGACGGATGCTGCCACTGCAGGAGTGAACC...CATTGGCCCCGTGAGCGCGGGTCTCTGATGGTGTTGTTTTCTGCACATCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CCA 90 bp | CTTAAGACAGGCAGGAGGCTTGGGTACCTCCTATTCTCCAACATCCTTGCCTTCGAGCTCACCGAGGGCTaGTACTGGGGCACCACGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LKTGRRLGYLLFSNILAFELTEG*YWGTTL Trigger: TAGCGTGGTGCCCCAGTACCAGCCCTCGGTGAGCTC...GAAGGCAAGGATGTTGGAGAATAGGAGGTACCCAAGCCTCCTGCCTGTCTTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CCA 90 bp | CAGTGGATGTGCAGAAAACAACACCATCAGAGACCCGCGCTCACGGGGCCAATGAGATCTCCATCTTCCTaGAGGGCAGCTCTTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QWMCRKQHHQRPALTGPMRSPSS*RAALQA Trigger: GGCCTGAAGAGCTGCCCTCCAGGAAGATGGAGATCT...CATTGGCCCCGTGAGCGCGGGTCTCTGATGGTGTTGTTTTCTGCACATCCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CCA 90 bp | CAGTGGATGTGCAGAAAACAACACCATCAGAGACCCGCGCTCACGGGGCCAATGAGACTGCTCACTGTCTaGCCGTTCTTGGAGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QWMCRKQHHQRPALTGPMRLLTV*PFLETW Trigger: CCAGGTCTCCAAGAACGGCCAGACAGTGAGCAGTCT...CATTGGCCCCGTGAGCGCGGGTCTCTGATGGTGTTGTTTTCTGCACATCCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| 3UTR CAA 72 bp | GCAGGAGGCTTGGGTACCTCCTATTCTCCAACATCCTaGCCTTCCACAACAGCAGGGTCTCCAGAGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGGLGTSYSPTS*PSTTAGSPELR Trigger: CCTGAGCTCTGGAGACCCTGCTGTTGTGGAAGGCAAGGATGTTGGAGAATAGGAGGTACCCAAGCCTCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR TCA 90 bp | CTTAAGACAGGCAGGAGGCTTGGGTACCTCCTATTCTCCAACATCCTTGCCTTCGTGCAGGGCGGCCAGTaGGAAGCCTTGTTGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LKTGRRLGYLLFSNILAFVQGGQ*EALLVQ Trigger: CTGTACCAACAAGGCTTCTCACTGGCCGCCCTGCAC...GAAGGCAAGGATGTTGGAGAATAGGAGGTACCCAAGCCTCCTGCCTGTCTTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR GCA 90 bp | AGAGTCGGGCCTCCAGCCCTGAGGTCTGGGAGGAACAGGCCAACTTTGCACTCTTTCTCTTCTGCTTGCTaGTTGTTGCTGGCACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVGPPALRSGRNRPTLHSFSSAC*LLLALS Trigger: ACTCAGTGCCAGCAACAAGCAGCAAGCAGAAGAGAA...AGAGTGCAAAGTTGGCCTGTTCCTCCCAGACCTCAGGGCTGGAGGCCCGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | TTGACACCATGCTGGGGCCTCTGCCAGGTCATGGTAAATACTTCTCACCACACAACCGAGTCCCTGTTGTaGCCAGCGGGACCATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTPCWGLCQVMVNTSHHTTESLL*PAGPFC Trigger: GCAGAATGGTCCCGCTGGCCACAACAGGGACTCGGT...TGTGTGGTGAGAAGTATTTACCATGACCTGGCAGAGGCCCCAGCATGGTGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR GCA 90 bp | GTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCACTATGTTCTTGCCCATTCTCTTCTGCTTGCTaGTTGTTGCTGGCACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VGKASRQAAGLMSLCSCPFSSAC*LLLALS Trigger: ACTCAGTGCCAGCAACAAGCAGCAAGCAGAAGAGAA...TGGGCAAGAACATAGTGACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCACTATGTTCTTGCCCATCATTCTCTTCTGCTTaGTGCTTGTTGCTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VGKASRQAAGLMSLCSCPSFSSA*CLLLAL Trigger: CAGTGCCAGCAACAAGCAGCAAGCAGAAGAGAATGA...TGGGCAAGAACATAGTGACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCTTGCCCAGAGCAGCAGCATGTAGGAGTGAGCAGAAAAACCTTGGTTTGTCCAGCGGGACCATTCTaGACAGCTGCTGAGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSCPEQQHVGVSRKTLVCPAGPF*TAAEPC Trigger: GCAGGGCTCAGCAGCTGTGCAGAATGGTCCCGCTGG...ACAAACCAAGGTTTTTCTGCTCACTCCTACATGCTGCTGCTCTGGGCAAGAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGAGTGGCTGAAGCCATCTGGTCTGGGAGGCTGCCAACCATCAGTCACCGAAACACAATCTGCTTaGTGGACACGTTCCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KAEWLKPSGLGGCQPSVTETQSA*WTRSLP Trigger: GGGAAGGGAACGTGTCCACCAAGCAGATTGTGTTTC...GGTGACTGATGGTTGGCAGCCTCCCAGACCAGATGGCTTCAGCCACTCAGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| 3UTR CAA 72 bp | CAGCCGGCAGGCTGCAGGGTTAATGTCACTATGTTCTaGCCCAGAGCAGCAGCATGTAGGAGTGAGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QPAGCRVNVTMF*PRAAACRSEQK Trigger: TTTCTGCTCACTCCTACATGCTGCTGCTCTGGGCAAGAACATAGTGACATTAACCCTGCAGCCTGCCGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTCGGGCCTCCAGCCCTGAGGTCTGGGAGGAACAGGCCAACTTTGCACTCTAAACAGCTTCAAAGATaGATACTCCATCTGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVGPPALRSGRNRPTLHSKQLQR*ILHLSG Trigger: GCCTGACAGATGGAGTATTCATCTTTGAAGCTGTTT...AGAGTGCAAAGTTGGCCTGTTCCTCCCAGACCTCAGGGCTGGAGGCCCGACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTGACATCTTGTCAGAACCATCAGGGTGTGTGGGAGGGGAAAAGAGTAAGTGGCTGCACAAATGGGTaGAGGGCGGCCAGTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVTSCQNHQGVWEGKRVSGCTNG*RAASEK Trigger: CTTCTCACTGGCCGCCCTGCACCCATTTGTGCAGCC...ACTTACTCTTTTCCCCTCCCACACACCCTGATGGTTCTGACAAGATGTCACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR GCA 90 bp | ACACAGAACAAACCAGCTGCTAGCAAGCTTCCCAAGGTTTGCAATCACAATGCATCTGCCCCACTGCGGTaGCCCCAGCACACAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQNKPAASKLPKVCNHNASAPLR*PQHTVS Trigger: GGAAACTGTGTGCTGGGGGCACCGCAGTGGGGCAGA...TGCATTGTGATTGCAAACCTTGGGAAGCTTGCTAGCAGCTGGTTTGTTCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | GAACTTCTATGCTACAGTGACATCTTGTCAGAACCATCAGGGTGTGTGGGAGGGTACAGCTCCAGAAGCTaGTCAGGCAGGTCCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ELLCYSDILSEPSGCVGGYSSRS*SGRSRR Trigger: TCTGCGGGACCTGCCTGACCAGCTTCTGGAGCTGTA...CCCTCCCACACACCCTGATGGTTCTGACAAGATGTCACTGTAGCATAGAAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CCA 90 bp | ACAGTGACATCTTGTCAGAACCATCAGGGTGTGTGGGAGGGGAAAAGAGTAAGTCTGTCTGGCCGTTCTTaGAGACCTGGAGGGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TVTSCQNHQGVWEGKRVSLSGRS*RPGGGW Trigger: CCATCCCCCTCCAGGTCTCCAAGAACGGCCAGACAG...ACTTACTCTTTTCCCCTCCCACACACCCTGATGGTTCTGACAAGATGTCACTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CCA 90 bp | TGGAGTCCTGTGGGGCAGTACAGGCACTATGGTCCATGCCCTTCCTTGTGGAAGCCAGCCTTGGAGAACTaGTCTTCCAGATTCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WSPVGQYRHYGPCPSLWKPALEN*SSRFFS Trigger: TGAGAAGAATCTGGAAGACCAGTTCTCCAAGGCTGG...CTTCCACAAGGAAGGGCATGGACCATAGTGCCTGTACTGCCCCACAGGACTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCACTATGTTCTTGCCCAAAACAGCTTCAAAGATaGATACTCCATCTGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGKASRQAAGLMSLCSCPKQLQR*ILHLSG Trigger: GCCTGACAGATGGAGTATTCATCTTTGAAGCTGTTT...TGGGCAAGAACATAGTGACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGTTCTCGCTCCATGGTTTGCCAGATGCTTCTACTTAAAGCCTTAACAACATTGGCAGCACACAGGTaGGCTGCCATCCGTAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WCSRSMVCQMLLLKALTTLAAHR*AAIRRP Trigger: CGGCCTACGGATGGCAGCTCACCTGTGTGCTGCCAA...TGTTGTTAAGGCTTTAAGTAGAAGCATCTGGCAAACCATGGAGCGAGAACACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR TCA 90 bp | CCTGTTTGTTTCCAGATCACCAGTATCTATAGAACTACCTTAAGACAGGCAGGACCTGCCTTTGCTCCCTaGCCTCAGAGGCTCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PVCFQITSIYRTTLRQAGPAFAP*PQRLCP Trigger: GGGGCAGAGCCTCTGAGGTCAGGGAGCAAAGGCAGG...TCCTGCCTGTCTTAAGGTAGTTCTATAGATACTGGTGATCTGGAAACAAACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | TTGACACCATGCTGGGGCCTCTGCCAGGTCATGGTAAATACTTCTCACCACACAGGATCTTCTCTTGCCTaGGGGTTGGCTGCACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LTPCWGLCQVMVNTSHHTGSSLA*GLAAQM Trigger: CATTTGTGCAGCCAACCCGCAGGCAAGAGAAGATCC...TGTGTGGTGAGAAGTATTTACCATGACCTGGCAGAGGCCCCAGCATGGTGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR GCA 90 bp | GAACTTCTATGCTACAGTGACATCTTGTCAGAACCATCAGGGTGTGTGGGAGGGAGCTGGCGTCTAGACTaGTCACTGTCTGGCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELLCYSDILSEPSGCVGGSWRLD*SLSGRS Trigger: AGAACGGCCAGACAGTGAGCAGTCTAGACGCCAGCT...CCCTCCCACACACCCTGATGGTTCTGACAAGATGTCACTGTAGCATAGAAGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR GCA 90 bp | ACACAGAACAAACCAGCTGCTAGCAAGCTTCCCAAGGTTTGCAATCACAATGCAGCTGAGCCCTGCCTTTaGTCCCTGACCTCAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQNKPAASKLPKVCNHNAAEPCL*SLTSEA Trigger: AGCCTCTGAGGTCAGGGAGCAAAGGCAGGGCTCAGC...TGCATTGTGATTGCAAACCTTGGGAAGCTTGCTAGCAGCTGGTTTGTTCTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGAACAAACCAGCTGCTAGCAAGCTTCCCAAGGTTTGCAATCACAATGCACCGTTCTTGGAGACCTaGAGGGGGATGGTGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQNKPAASKLPKVCNHNAPFLET*RGMVTG Trigger: CCCTGTCACCATCCCCCTCCAGGTCTCCAAGAACGG...TGCATTGTGATTGCAAACCTTGGGAAGCTTGCTAGCAGCTGGTTTGTTCTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGAACAAACCAGCTGCTAGCAAGCTTCCCAAGGTTTGCAATCACAATGCACTGTCTGGCCGTTCTTaGAGACCTGGAGGGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TQNKPAASKLPKVCNHNALSGRS*RPGGGW Trigger: CCATCCCCCTCCAGGTCTCCAAGAACGGCCAGACAG...TGCATTGTGATTGCAAACCTTGGGAAGCTTGCTAGCAGCTGGTTTGTTCTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | TTGACACCATGCTGGGGCCTCTGCCAGGTCATGGTAAATACTTCTCACCACACAAACGGTCCCCTAAGGTaGATTTCACATCCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTPCWGLCQVMVNTSHHTNGPLR*ISHPWH Trigger: ATGCCAGGGATGTGAAATGCACCTTAGGGGACCGTT...TGTGTGGTGAGAAGTATTTACCATGACCTGGCAGAGGCCCCAGCATGGTGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR GCA 90 bp | TACAACTCAATGACACATCAACAAAAACAGCACACAAGGGCACCCAGTTACCAAGCTGAGCCCTGCCTTTaGTCCCTGACCTCAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YNSMTHQQKQHTRAPSYQAEPCL*SLTSEA Trigger: AGCCTCTGAGGTCAGGGAGCAAAGGCAGGGCTCAGC...TTGGTAACTGGGTGCCCTTGTGTGCTGTTTTTGTTGATGTGTCATTGAGTTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGGATCATTAAGACAGCTTTCCAGTGGATGTGCAGAAAACAACACCATCAGTGTTGGAGTGGGGCCTaGAGCAAGCTCAGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KWIIKTAFQWMCRKQHHQCWSGA*SKLSLS Trigger: GCTGAGGCTGAGCTTGCTGCAGGCCCCACTCCAACA...CTGATGGTGTTGTTTTCTGCACATCCACTGGAAAGCTGTCTTAATGATCCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| 3UTR CAA 72 bp | CCTCCAGCCCTGAGGTCTGGGAGGAACAGGCCAACTTaGCACTCTAAAAGAAGTGGATCATTAAGACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPALRSGRNRPT*HSKRSGSLRQL Trigger: AAGCTGTCTTAATGATCCACTTCTTTTAGAGTGCAAAGTTGGCCTGTTCCTCCCAGACCTCAGGGCTGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | TACAACTCAATGACACATCAACAAAAACAGCACACAAGGGCACCCAGTTACCAAACTTCAAGCCCTGACTaGCGGCCTCCTGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YNSMTHQQKQHTRAPSYQTSSPD*RPPAPS Trigger: AGAAGGTGCAGGAGGCCGCCAGTCAGGGCTTGAAGT...TTGGTAACTGGGTGCCCTTGTGTGCTGTTTTTGTTGATGTGTCATTGAGTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CCA 90 bp | GAACTTCTATGCTACAGTGACATCTTGTCAGAACCATCAGGGTGTGTGGGAGGGTGCCGACATTTCTGCTaGCTCTTCGGTCTGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELLCYSDILSEPSGCVGGCRHFC*LFGLLK Trigger: TTTCAACAGACCGAAGAGCCAGCAGAAATGTCGGCA...CCCTCCCACACACCCTGATGGTTCTGACAAGATGTCACTGTAGCATAGAAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CCA 90 bp | ACACAGAACAAACCAGCTGCTAGCAAGCTTCCCAAGGTTTGCAATCACAATGCACCGCCTTTCCGGAAATaGTCACTCATGTGTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQNKPAASKLPKVCNHNAPPFRK*SLMCSS Trigger: GCTGGAACACATGAGTGACCATTTCCGGAAAGGCGG...TGCATTGTGATTGCAAACCTTGGGAAGCTTGCTAGCAGCTGGTTTGTTCTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | CTCAATGACACATCAACAAAAACAGCACACAAGGGCACCCAGTTACCAACTGCTCCGCCTTTCCGGAAATaGTCACTCATGTGTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNDTSTKTAHKGTQLPTAPPFRK*SLMCSS Trigger: GCTGGAACACATGAGTGACCATTTCCGGAAAGGCGG...AGCAGTTGGTAACTGGGTGCCCTTGTGTGCTGTTTTTGTTGATGTGTCATTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCTTGCCCAGAGCAGCAGCATGTAGGAGTGAGCAGAAAAACCTTGGTTTGTGAAACACAATCTGCTTaGTGGACACGTTCCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CSCPEQQHVGVSRKTLVCETQSA*WTRSLP Trigger: GGGAAGGGAACGTGTCCACCAAGCAGATTGTGTTTC...ACAAACCAAGGTTTTTCTGCTCACTCCTACATGCTGCTGCTCTGGGCAAGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | CCTGTTTGTTTCCAGATCACCAGTATCTATAGAACTACCTTAAGACAGGCAGGAAGCTGGCGTCTAGACTaGTCACTGTCTGGCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVCFQITSIYRTTLRQAGSWRLD*SLSGRS Trigger: AGAACGGCCAGACAGTGAGCAGTCTAGACGCCAGCT...TCCTGCCTGTCTTAAGGTAGTTCTATAGATACTGGTGATCTGGAAACAAACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | GAATTACCTGTTTGTTTCCAGATCACCAGTATCTATAGAACTACCTTAAGACAGTCTGCCCCACTGCGGTaGCCCCAGCACACAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELPVCFQITSIYRTTLRQSAPLR*PQHTVS Trigger: GGAAACTGTGTGCTGGGGGCACCGCAGTGGGGCAGA...CTGTCTTAAGGTAGTTCTATAGATACTGGTGATCTGGAAACAAACAGGTAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAGACAGCTTTCCAGTGGATGTGCAGAAAACAACACCATCAGAGACCCGCGCGTCATAGCCCTGTGTaGTTCTGTTATCTTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IKTAFQWMCRKQHHQRPARHSPV*FCYLLW Trigger: CCACAGAAGATAACAGAACCACACAGGGCTATGACG...CGCGGGTCTCTGATGGTGTTGTTTTCTGCACATCCACTGGAAAGCTGTCTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTTGATAGCCTGATACTGGCACAGCACCCTGAAATCATTTTAAAAATTTCCACAAACTTCAAGCCCTaGCTGGCGGCCTCCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LFDSLILAQHPEIILKISTNFKP*LAASCT Trigger: GGTGCAGGAGGCCGCCAGTCAGGGCTTGAAGTTTGT...GGAAATTTTTAAAATGATTTCAGGGTGCTGTGCCAGTATCAGGCTATCAAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR GCA 90 bp | CTCAATGACACATCAACAAAAACAGCACACAAGGGCACCCAGTTACCAACTGCTTCATTCTCTTCTGCTTaGTGCTTGTTGCTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LNDTSTKTAHKGTQLPTASFSSA*CLLLAL Trigger: CAGTGCCAGCAACAAGCAGCAAGCAGAAGAGAATGA...AGCAGTTGGTAACTGGGTGCCCTTGTGTGCTGTTTTTGTTGATGTGTCATTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | GAATTACCTGTTTGTTTCCAGATCACCAGTATCTATAGAACTACCTTAAGACAGCCGTTCTTGGAGACCTaGAGGGGGATGGTGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELPVCFQITSIYRTTLRQPFLET*RGMVTG Trigger: CCCTGTCACCATCCCCCTCCAGGTCTCCAAGAACGG...CTGTCTTAAGGTAGTTCTATAGATACTGGTGATCTGGAAACAAACAGGTAATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGTTCTCGCTCCATGGTTTGCCAGATGCTTCTACTTAAAGCCTTAACAACATGCCGACATTTCTGCTaGCTCTTCGGTCTGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WCSRSMVCQMLLLKALTTCRHFC*LFGLLK Trigger: TTTCAACAGACCGAAGAGCCAGCAGAAATGTCGGCA...TGTTGTTAAGGCTTTAAGTAGAAGCATCTGGCAAACCATGGAGCGAGAACACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CCA 90 bp | GAATTACCTGTTTGTTTCCAGATCACCAGTATCTATAGAACTACCTTAAGACAGTTGGCCATGCCAAGCTaGAAGACGGCGTTCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELPVCFQITSIYRTTLRQLAMPS*KTAFTS Trigger: GCTGGTGAACGCCGTCTTCCAGCTTGGCATGGCCAA...CTGTCTTAAGGTAGTTCTATAGATACTGGTGATCTGGAAACAAACAGGTAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR GCA 90 bp | CCTGTTTGTTTCCAGATCACCAGTATCTATAGAACTACCTTAAGACAGGCAGGACTTCTCATTCTCTTCTaGTTGCTGCTTGTTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVCFQITSIYRTTLRQAGLLILF*LLLVAG Trigger: GCCAGCAACAAGCAGCAAGCAGAAGAGAATGAGAAG...TCCTGCCTGTCTTAAGGTAGTTCTATAGATACTGGTGATCTGGAAACAAACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| 3UTR CAA 72 bp | AAAAGAGTAAGTGAAACCCCAGAAGACATCCCAGTATaGTTTGATAGCCTGATACTGGCACAGCACCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KRVSETPEDIPV*FDSLILAQHPE Trigger: TTCAGGGTGCTGTGCCAGTATCAGGCTATCAAACAATACTGGGATGTCTTCTGGGGTTTCACTTACTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CCA 90 bp | GAATTACCTGTTTGTTTCCAGATCACCAGTATCTATAGAACTACCTTAAGACAGTCTGGGATGAGCTTCTaGTCGGCCAGGTGTTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELPVCFQITSIYRTTLRQSGMSF*SARCSK Trigger: CTTAGAACACCTGGCCGACCAGAAGCTCATCCCAGA...CTGTCTTAAGGTAGTTCTATAGATACTGGTGATCTGGAAACAAACAGGTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR TCA 90 bp | GAATTACCTGTTTGTTTCCAGATCACCAGTATCTATAGAACTACCTTAAGACAGAGGTCTCTTCAGAGTTaGATAAATGTTCCCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ELPVCFQITSIYRTTLRQRSLQS*INVPRP Trigger: CGGCCTGGGAACATTTATTCAACTCTGAAGAGACCT...CTGTCTTAAGGTAGTTCTATAGATACTGGTGATCTGGAAACAAACAGGTAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CCA 90 bp | GAATTACCTGTTTGTTTCCAGATCACCAGTATCTATAGAACTACCTTAAGACAGAGGTCACATCTACTTTaGTCTCCACCTGAGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELPVCFQITSIYRTTLRQRSHLL*SPPEVS Trigger: AGAGACCTCAGGTGGAGACCAAAGTAGATGTGACCT...CTGTCTTAAGGTAGTTCTATAGATACTGGTGATCTGGAAACAAACAGGTAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS CCA 90 bp | TCGCCAGCCTCATTCTCTGCCGAGGGAGAGGGAATGCCAGGCTGCTaGGCACTGGGCACGTCCCCTGTGGATCCTGGTTTGGTCTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPASFSAEGEGMPGC*ALGTSPVDPGLVSG Trigger: ACCGGAGACCAAACCAGGATCCACAGGGGACGTGCCCAGTGCCCAGCAGCCTGGCATTCCCTCTCCCTCGGCAGAGAATGAGGCTGGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS GCA 90 bp | AACTCGCCAGCCTCATTCTCTGCCGAGGGAGAGGGAATGCCAGGCTaGTGGGCACTGGGCACGTCCCCTGTGGATCCTGGTTTGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NSPASFSAEGEGMPG*WALGTSPVDPGLVS Trigger: GGAGACCAAACCAGGATCCACAGGGGACGTGCCCAGTGCCCAGCAGCCTGGCATTCCCTCTCCCTCGGCAGAGAATGAGGCTGGCGAGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS GCA 90 bp | GCAGTGGAAACTCGCCAGCCTCATTCTCTGCCGAGGGAGAGGGAATaGCAGGCTGCTGGGCACTGGGCACGTCCCCTGTGGATCCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AVETRQPHSLPRERE*QAAGHWARPLWILV Trigger: AACCAGGATCCACAGGGGACGTGCCCAGTGCCCAGCAGCCTGGCATTCCCTCTCCCTCGGCAGAGAATGAGGCTGGCGAGTTTCCACTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS CCA 90 bp | TGCCAGGCTGCTGGGCACTGGGCACGTCCCCTGTGGATCCTGGTTTaGTCTCCGGTCTTCGGTTCACTCCTGCAGTGGCAGCATCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CQAAGHWARPLWILV*SPVFGSLLQWQHPS Trigger: AGACGGATGCTGCCACTGCAGGAGTGAACCGAAGACCGGAGACCAAACCAGGATCCACAGGGGACGTGCCCAGTGCCCAGCAGCCTGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS CCA 90 bp | GGGAATGCCAGGCTGCTGGGCACTGGGCACGTCCCCTGTGGATCCTaGTTTGGTCTCCGGTCTTCGGTTCACTCCTGCAGTGGCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: GNARLLGTGHVPCGS*FGLRSSVHSCSGSI Trigger: GATGCTGCCACTGCAGGAGTGAACCGAAGACCGGAGACCAAACCAGGATCCACAGGGGACGTGCCCAGTGCCCAGCAGCCTGGCATTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS CCA 90 bp | AGGGAGAGGGAATGCCAGGCTGCTGGGCACTGGGCACGTCCCCTGTaGATCCTGGTTTGGTCTCCGGTCTTCGGTTCACTCCTGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RERECQAAGHWARPL*ILVWSPVFGSLLQW Trigger: CCACTGCAGGAGTGAACCGAAGACCGGAGACCAAACCAGGATCCACAGGGGACGTGCCCAGTGCCCAGCAGCCTGGCATTCCCTCTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS CCA 90 bp | TCAGCTCTGGGATTCGAGTGCCTAAGGGCCACCGAGTCCCTGTTGTaGCCAGCGGGACCATTCTGCACAGCTGCTGAGCCCTGCCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SALGFECLRATESLL*PAGPFCTAAEPCLC Trigger: GCAAAGGCAGGGCTCAGCAGCTGTGCAGAATGGTCCCGCTGGCCACAACAGGGACTCGGTGGCCCTTAGGCACTCGAATCCCAGAGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGGAAGGCCAGCCGGCAGGCTGCAGGGTTAATGTCACTATGTTCTTGCCCAGCCACCGAGTCCCTGTaGTGGCCAGCGGGACCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VGKASRQAAGLMSLCSCPATESL*WPAGPF Trigger: GAATGGTCCCGCTGGCCACAACAGGGACTCGGTGGC...TGGGCAAGAACATAGTGACATTAACCCTGCAGCCTGCCGGCTGGCCTTCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCCTTGTGGAAGAGGCGGACCAGAGTCGGGCCTCCAGCCCTGAGGTCTGGCTCATTCTCTTCTGCTaGCTGCTTGTTGCTGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: PFLVEEADQSRASSPEVWLILFC*LLVAGT Trigger: AGTGCCAGCAACAAGCAGCAAGCAGAAGAGAATGAG...CCAGACCTCAGGGCTGGAGGCCCGACTCTGGTCCGCCTCTTCCACAAGGAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS TCA 90 bp | TGCATTTCACATCCCTGGCATCTTCAACACTGTTGGCAACAGGCTTaGGACGCCGGCTGCCTGCTGAGCTCACCGAGGGCTGGTACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CISHPWHLQHCWQQA*DAGCLLSSPRAGTG Trigger: CCCAGTACCAGCCCTCGGTGAGCTCAGCAGGCAGCCGGCGTCTCAAGCCTGTTGCCAACAGTGTTGAAGATGCCAGGGATGTGAAATGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS CCA 90 bp | CTTGGTGGACACGTTCCCTTCCCTGGTAGTCTTGAGTATAGGCGTTaGCAGCACACAGGTGAGCTGCCATCCGTAGGCCGCCAGCGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LGGHVPFPGSLEYRR*QHTGELPSVGRQRV Trigger: AACTCGCTGGCGGCCTACGGATGGCAGCTCACCTGTGTGCTGCCAACGCCTATACTCAAGACTACCAGGGAAGGGAACGTGTCCACCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS TCA 90 bp | ATCTTCAACACTGTTGGCAACAGGCTTGAGACGCCGGCTGCCTGCTaGGCTCACCGAGGGCTGGTACTGGGGCACCACGCTAACAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: IFNTVGNRLETPAAC*AHRGLVLGHHANKL Trigger: AAGTTTGTTAGCGTGGTGCCCCAGTACCAGCCCTCGGTGAGCTCAGCAGGCAGCCGGCGTCTCAAGCCTGTTGCCAACAGTGTTGAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS CCA 90 bp | CCAAGCTGGAAGACGGCGTTCACCAGCACACCGCCTTTCCGGAAATaGTCACTCATGTGTTCCAGCCAGCTGGCGTCTAGACTGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: PSWKTAFTSTPPFRK*SLMCSSQLASRLLT Trigger: AGTGAGCAGTCTAGACGCCAGCTGGCTGGAACACATGAGTGACCATTTCCGGAAAGGCGGTGTGCTGGTGAACGCCGTCTTCCAGCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS GCA 90 bp | CGAAAGATGTGTTCCAGGAGGATCTTCTCTTGCCTGCGGGTTGGCTaGACAAATGGGTGCAGGGCGGCCAGTGAGAAGCCTTGTTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RKMCSRRIFSCLRVG*TNGCRAASEKPCWY Trigger: GTACCAACAAGGCTTCTCACTGGCCGCCCTGCACCCATTTGTGCAGCCAACCCGCAGGCAAGAGAAGATCCTCCTGGAACACATCTTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CAA 90 bp | GGGGCAGTACAGGCACTATGGTCCATGCCCTTCCTTGTGGAAGAGGCGGACCAGTCTTCTGCTTGCTGCTaGTTGCTGGCACTGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GAVQALWSMPFLVEEADQSSACC*LLALSF Trigger: GAAACTCAGTGCCAGCAACAAGCAGCAAGCAGAAGA...CTGGTCCGCCTCTTCCACAAGGAAGGGCATGGACCATAGTGCCTGTACTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGGATGTGCAGAAAACAACACCATCAGAGACCCGCGCTCACGGGGCCAATGCCCACATCTCCAGCCTaGGAGAACTGGTCTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QWMCRKQHHQRPALTGPMPTSPA*ENWSSR Trigger: TCTGGAAGACCAGTTCTCCAAGGCTGGAGATGTGGG...CATTGGCCCCGTGAGCGCGGGTCTCTGATGGTGTTGTTTTCTGCACATCCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGTCCTGTGGGGCAGTACAGGCACTATGGTCCATGCCCTTCCTTGTGGAAGCCCACATCTCCAGCCTaGGAGAACTGGTCTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WSPVGQYRHYGPCPSLWKPTSPA*ENWSSR Trigger: TCTGGAAGACCAGTTCTCCAAGGCTGGAGATGTGGG...CTTCCACAAGGAAGGGCATGGACCATAGTGCCTGTACTGCCCCACAGGACTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS GCA 90 bp | TGCTGCTTGTTGCTGGCACTGAGTTTCCCTTTGGATTTCCTTGTCTaGCTGCCGTGGATCTCGTTCCGGGAGAATCGCCACTGGAACTTA | + |
|
Preference number: 5 (lower is better) Translates to: CCLLLALSFPLDFLV*LPWISFRENRHWNL Trigger: TAAGTTCCAGTGGCGATTCTCCCGGAACGAGATCCACGGCAGGCAGACAAGGAAATCCAAAGGGAAACTCAGTGCCAGCAACAAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS CCA 90 bp | TTGCTGGCACTGAGTTTCCCTTTGGATTTCCTTGTCTGCCTGCCGTaGATCTCGTTCCGGGAGAATCGCCACTGGAACTTAGATTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLALSFPLDFLVCLP*ISFRENRHWNLDSL Trigger: GAGGGAATCTAAGTTCCAGTGGCGATTCTCCCGGAACGAGATCCACGGCAGGCAGACAAGGAAATCCAAAGGGAAACTCAGTGCCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAGACAGGCAGGAGGCTTGGGTACCTCCTATTCTCCAACATCCTTGCCTTCTCTGCTTGCTGCTTGTaGCTGGCACTGAGTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LKTGRRLGYLLFSNILAFSACCL*LALSFP Trigger: AGGGAAACTCAGTGCCAGCAACAAGCAGCAAGCAGA...GAAGGCAAGGATGTTGGAGAATAGGAGGTACCCAAGCCTCCTGCCTGTCTTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS TCA 90 bp | AGCCTTCGTCGTGAAGCTCAGCCTTCTGAGACCTGTTGGTTTTCTTaGCCAGGATGGCCCGAAAGATGTGTTCCAGGAGGATCTTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLRREAQPSETCWFS*PGWPERCVPGGSSL Trigger: AAGAGAAGATCCTCCTGGAACACATCTTTCGGGCCATCCTGGTCAAGAAAACCAACAGGTCTCAGAAGGCTGAGCTTCACGACGAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CAA 90 bp | ACACAGAACAAACCAGCTGCTAGCAAGCTTCCCAAGGTTTGCAATCACAATGCATCTCTTGCCTGCGGGTaGGCTGCACAAATGGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TQNKPAASKLPKVCNHNASLACG*AAQMGA Trigger: TGCACCCATTTGTGCAGCCAACCCGCAGGCAAGAGA...TGCATTGTGATTGCAAACCTTGGGAAGCTTGCTAGCAGCTGGTTTGTTCTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CAA 90 bp | AAGTGGATCATTAAGACAGCTTTCCAGTGGATGTGCAGAAAACAACACCATCAGCTGTTGGCAACAGGCTaGAGACGCCGGCTGCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KWIIKTAFQWMCRKQHHQLLATG*RRRLPA Trigger: AGCAGGCAGCCGGCGTCTCAAGCCTGTTGCCAACAG...CTGATGGTGTTGTTTTCTGCACATCCACTGGAAAGCTGTCTTAATGATCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CAA 90 bp | CTTAAGACAGGCAGGAGGCTTGGGTACCTCCTATTCTCCAACATCCTTGCCTTCCTCATTCTCTTCTGCTaGCTGCTTGTTGCTGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LKTGRRLGYLLFSNILAFLILFC*LLVAGT Trigger: AGTGCCAGCAACAAGCAGCAAGCAGAAGAGAATGAG...GAAGGCAAGGATGTTGGAGAATAGGAGGTACCCAAGCCTCCTGCCTGTCTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| CDS TCA 90 bp | CCAGATTCTTCTCATTCTCTTCTGCTTGCTGCTTGTTGCTGGCACTaGGTTTCCCTTTGGATTTCCTTGTCTGCCTGCCGTGGATCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PDSSHSLLLAACCWH*VSLWISLSACRGSR Trigger: ACGAGATCCACGGCAGGCAGACAAGGAAATCCAAAGGGAAACTCAGTGCCAGCAACAAGCAGCAAGCAGAAGAGAATGAGAAGAATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS GCA 90 bp | CAGCCTTCGGAGTATCATTTTCCAAGGATGAACGGTCCCCTAAGGTaGATTTCACATCCCTGGCATCTTCAACACTGTTGGCAACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QPSEYHFPRMNGPLR*ISHPWHLQHCWQQA Trigger: AGCCTGTTGCCAACAGTGTTGAAGATGCCAGGGATGTGAAATGCACCTTAGGGGACCGTTCATCCTTGGAAAATGATACTCCGAAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CAA 90 bp | GAACTTCTATGCTACAGTGACATCTTGTCAGAACCATCAGGGTGTGTGGGAGGGGAGGTCTCTTCAGAGTaGAATAAATGTTCCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ELLCYSDILSEPSGCVGGEVSSE*NKCSQA Trigger: GGCCTGGGAACATTTATTCAACTCTGAAGAGACCTC...CCCTCCCACACACCCTGATGGTTCTGACAAGATGTCACTGTAGCATAGAAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS GCA 90 bp | GCCTTGGAGAACTGGTCTTCCAGATTCTTCTCATTCTCTTCTGCTTaGTGCTTGTTGCTGGCACTGAGTTTCCCTTTGGATTTCCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ALENWSSRFFSFSSA*CLLLALSFPLDFLV Trigger: GACAAGGAAATCCAAAGGGAAACTCAGTGCCAGCAACAAGCAGCAAGCAGAAGAGAATGAGAAGAATCTGGAAGACCAGTTCTCCAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| CDS GCA 90 bp | TCCAGCCTTGGAGAACTGGTCTTCCAGATTCTTCTCATTCTCTTCTaGTTGCTGCTTGTTGCTGGCACTGAGTTTCCCTTTGGATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLGELVFQILLILF*LLLVAGTEFPFGFP Trigger: AGGAAATCCAAAGGGAAACTCAGTGCCAGCAACAAGCAGCAAGCAGAAGAGAATGAGAAGAATCTGGAAGACCAGTTCTCCAAGGCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| CDS-3UTR CAA 90 bp | AAAGAACAGACAATTTTACTTACATTAAACATGGAGTCCATGGATGGAAAGGCAGCCACCGAGTCCCTGTaGTGGCCAGCGGGACCATTC | + |
|
Preference number: 5 (lower is better) Translates to: KEQTILLTLNMESMDGKAATESL*WPAGPF Trigger: GAATGGTCCCGCTGGCCACAACAGGGACTCGGTGGC...TGCCTTTCCATCCATGGACTCCATGTTTAATGTAAGTAAAATTGTCTGTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS TCA 90 bp | ATAGGTCACATCTACTTTGGTCTCCACCTGAGGTCTCTTCAGAGTTaGATAAATGTTCCCAGGCCGCTTTTCTTCACGTTTCTCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IGHIYFGLHLRSLQS*INVPRPLFFTFLQL Trigger: AAGCTGGAGAAACGTGAAGAAAAGCGGCCTGGGAACATTTATTCAACTCTGAAGAGACCTCAGGTGGAGACCAAAGTAGATGTGACCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| CDS-3UTR CAA 90 bp | TTGTTTGATAGCCTGATACTGGCACAGCACCCTGAAATCATTTTAAAAATTTCCGCATCTTCAACACTGTaGGCAACAGGCTTGAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: LFDSLILAQHPEIILKISASSTL*ATGLRR Trigger: GCGTCTCAAGCCTGTTGCCAACAGTGTTGAAGATGC...GGAAATTTTTAAAATGATTTCAGGGTGCTGTGCCAGTATCAGGCTATCAAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS-3UTR CAA 90 bp | TTGTTTGATAGCCTGATACTGGCACAGCACCCTGAAATCATTTTAAAAATTTCCTCTTCTGCTTGCTGCTaGTTGCTGGCACTGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFDSLILAQHPEIILKISSSACC*LLALSF Trigger: GAAACTCAGTGCCAGCAACAAGCAGCAAGCAGAAGA...GGAAATTTTTAAAATGATTTCAGGGTGCTGTGCCAGTATCAGGCTATCAAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS GCA 72 bp | GCCTCATTCTCTGCCGAGGGAGAGGGAATGCCAGGCTaGTGGGCACTGGGCACGTCCCCTGTGGATCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ASFSAEGEGMPG*WALGTSPVDPG Trigger: ACCAGGATCCACAGGGGACGTGCCCAGTGCCCAGCAGCCTGGCATTCCCTCTCCCTCGGCAGAGAATGAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| CDS GCA 72 bp | GCGGGACCATTCTGCACAGCTGCTGAGCCCTGCCTTTaGTCCCTGACCTCAGAGGCTCTGCCCCACTGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: AGPFCTAAEPCL*SLTSEALPHCG Trigger: ACCGCAGTGGGGCAGAGCCTCTGAGGTCAGGGAGCAAAGGCAGGGCTCAGCAGCTGTGCAGAATGGTCCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| CDS CCA 72 bp | GGATTCGAGTGCCTAAGGGCCACCGAGTCCCTGTTGTaGCCAGCGGGACCATTCTGCACAGCTGCTGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GFECLRATESLL*PAGPFCTAAEP Trigger: GGGCTCAGCAGCTGTGCAGAATGGTCCCGCTGGCCACAACAGGGACTCGGTGGCCCTTAGGCACTCGAATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| CDS CAA 90 bp | ATGCCAGGCTGCTGGGCACTGGGCACGTCCCCTGTGGATCCTGGTTaGGTCTCCGGTCTTCGGTTCACTCCTGCAGTGGCAGCATCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: MPGCWALGTSPVDPG*VSGLRFTPAVAASV Trigger: GACGGATGCTGCCACTGCAGGAGTGAACCGAAGACCGGAGACCAAACCAGGATCCACAGGGGACGTGCCCAGTGCCCAGCAGCCTGGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| CDS CAA 90 bp | GCCTCAGCTCTGGGATTCGAGTGCCTAAGGGCCACCGAGTCCCTGTaGTGGCCAGCGGGACCATTCTGCACAGCTGCTGAGCCCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASALGFECLRATESL*WPAGPFCTAAEPCL Trigger: AAGGCAGGGCTCAGCAGCTGTGCAGAATGGTCCCGCTGGCCACAACAGGGACTCGGTGGCCCTTAGGCACTCGAATCCCAGAGCTGAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| CDS CCA 72 bp | TTGAGACGCCGGCTGCCTGCTGAGCTCACCGAGGGCTaGTACTGGGGCACCACGCTAACAAACTTCAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LRRRLPAELTEG*YWGTTLTNFKP Trigger: GGGCTTGAAGTTTGTTAGCGTGGTGCCCCAGTACCAGCCCTCGGTGAGCTCAGCAGGCAGCCGGCGTCTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| CDS CCA 72 bp | AGGCTGCTGGGCACTGGGCACGTCCCCTGTGGATCCTaGTTTGGTCTCCGGTCTTCGGTTCACTCCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RLLGTGHVPCGS*FGLRSSVHSCS Trigger: ACTGCAGGAGTGAACCGAAGACCGGAGACCAAACCAGGATCCACAGGGGACGTGCCCAGTGCCCAGCAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| CDS CCA 72 bp | GAATGCCAGGCTGCTGGGCACTGGGCACGTCCCCTGTaGATCCTGGTTTGGTCTCCGGTCTTCGGTTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: ECQAAGHWARPL*ILVWSPVFGSL Trigger: GAGTGAACCGAAGACCGGAGACCAAACCAGGATCCACAGGGGACGTGCCCAGTGCCCAGCAGCCTGGCATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| CDS CAA 72 bp | TGCTGGGCACTGGGCACGTCCCCTGTGGATCCTGGTTaGGTCTCCGGTCTTCGGTTCACTCCTGCAGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CWALGTSPVDPG*VSGLRFTPAVA Trigger: TGCCACTGCAGGAGTGAACCGAAGACCGGAGACCAAACCAGGATCCACAGGGGACGTGCCCAGTGCCCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| CDS CAA 72 bp | CTGGGATTCGAGTGCCTAAGGGCCACCGAGTCCCTGTaGTGGCCAGCGGGACCATTCTGCACAGCTGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGFECLRATESL*WPAGPFCTAAE Trigger: CTCAGCAGCTGTGCAGAATGGTCCCGCTGGCCACAACAGGGACTCGGTGGCCCTTAGGCACTCGAATCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| CDS TCA 72 bp | CATCCCTGGCATCTTCAACACTGTTGGCAACAGGCTTaGGACGCCGGCTGCCTGCTGAGCTCACCGAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: HPWHLQHCWQQA*DAGCLLSSPRA Trigger: AGCCCTCGGTGAGCTCAGCAGGCAGCCGGCGTCTCAAGCCTGTTGCCAACAGTGTTGAAGATGCCAGGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| CDS CAA 72 bp | ACATCCCTGGCATCTTCAACACTGTTGGCAACAGGCTaGAGACGCCGGCTGCCTGCTGAGCTCACCGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TSLASSTLLATG*RRRLPAELTEG Trigger: GCCCTCGGTGAGCTCAGCAGGCAGCCGGCGTCTCAAGCCTGTTGCCAACAGTGTTGAAGATGCCAGGGATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| CDS GCA 72 bp | TGTTCCAGGAGGATCTTCTCTTGCCTGCGGGTTGGCTaGACAAATGGGTGCAGGGCGGCCAGTGAGAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CSRRIFSCLRVG*TNGCRAASEKP Trigger: AGGCTTCTCACTGGCCGCCCTGCACCCATTTGTGCAGCCAACCCGCAGGCAAGAGAAGATCCTCCTGGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| CDS GCA 72 bp | GGATCCTGGTTTGGTCTCCGGTCTTCGGTTCACTCCTaGAGTGGCAGCATCCGTCTCTGCAGCCTTCGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSWFGLRSSVHS*SGSIRLCSLRS Trigger: ACTCCGAAGGCTGCAGAGACGGATGCTGCCACTGCAGGAGTGAACCGAAGACCGGAGACCAAACCAGGATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| CDS CCA 72 bp | TGTTCCAGCCAGCTGGCGTCTAGACTGCTCACTGTCTaGCCGTTCTTGGAGACCTGGAGGGGGATGGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: CSSQLASRLLTV*PFLETWRGMVT Trigger: TGTCACCATCCCCCTCCAGGTCTCCAAGAACGGCCAGACAGTGAGCAGTCTAGACGCCAGCTGGCTGGAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| CDS CCA 72 bp | CACGTTCCCTTCCCTGGTAGTCTTGAGTATAGGCGTTaGCAGCACACAGGTGAGCTGCCATCCGTAGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: HVPFPGSLEYRR*QHTGELPSVGR Trigger: GCGGCCTACGGATGGCAGCTCACCTGTGTGCTGCCAACGCCTATACTCAAGACTACCAGGGAAGGGAACGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| CDS CAA 90 bp | GTGCATTTCACATCCCTGGCATCTTCAACACTGTTGGCAACAGGCTaGAGACGCCGGCTGCCTGCTGAGCTCACCGAGGGCTGGTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: VHFTSLASSTLLATG*RRRLPAELTEGWYW Trigger: CCAGTACCAGCCCTCGGTGAGCTCAGCAGGCAGCCGGCGTCTCAAGCCTGTTGCCAACAGTGTTGAAGATGCCAGGGATGTGAAATGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| CDS CAA 90 bp | CGGTCCCCTAAGGTGCATTTCACATCCCTGGCATCTTCAACACTGTaGGCAACAGGCTTGAGACGCCGGCTGCCTGCTGAGCTCACCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RSPKVHFTSLASSTL*ATGLRRRLPAELTE Trigger: CTCGGTGAGCTCAGCAGGCAGCCGGCGTCTCAAGCCTGTTGCCAACAGTGTTGAAGATGCCAGGGATGTGAAATGCACCTTAGGGGACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS TCA 72 bp | CTGTCTGGCCGTTCTTGGAGACCTGGAGGGGGATGGTaGCAGGGTAGTACTGCCGACATTTCTGCTGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSGRSWRPGGGW*QGSTADISAGS Trigger: AGAGCCAGCAGAAATGTCGGCAGTACTACCCTGTCACCATCCCCCTCCAGGTCTCCAAGAACGGCCAGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS GCA 72 bp | ATCTTCTCTTGCCTGCGGGTTGGCTGCACAAATGGGTaGAGGGCGGCCAGTGAGAAGCCTTGTTGGTACAGC | + |
|
Preference number: 6 (lower is better) Translates to: IFSCLRVGCTNG*RAASEKPCWYS Trigger: GCTGTACCAACAAGGCTTCTCACTGGCCGCCCTGCACCCATTTGTGCAGCCAACCCGCAGGCAAGAGAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS GCA 72 bp | TTTGAGGGGTCGCCCTCTGATCTATCCAGTGCTGGCTaGAAACCCCGCAGTGGAAACTCGCCAGCCTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: FEGSPSDLSSAG*KPRSGNSPASF Trigger: GAATGAGGCTGGCGAGTTTCCACTGCGGGGTTTGCAGCCAGCACTGGATAGATCAGAGGGCGACCCCTCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS GCA 72 bp | CTCCATCTGTCAGGCCATAGAAGGAATCATTGGCCATaGCAAGCTGGAAGACGGCGTTCACCAGCACACCGC | + |
|
Preference number: 6 (lower is better) Translates to: LHLSGHRRNHWP*QAGRRRSPAHR Trigger: GCGGTGTGCTGGTGAACGCCGTCTTCCAGCTTGGCATGGCCAATGATTCCTTCTATGGCCTGACAGATGGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS CCA 72 bp | AAGACGGCGTTCACCAGCACACCGCCTTTCCGGAAATaGTCACTCATGTGTTCCAGCCAGCTGGCGTCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: KTAFTSTPPFRK*SLMCSSQLASR Trigger: TCTAGACGCCAGCTGGCTGGAACACATGAGTGACCATTTCCGGAAAGGCGGTGTGCTGGTGAACGCCGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS CAA 90 bp | CCCCACTGCGGTGCCCCCAGCACACAGTTTCCCACATCTCCAGCCTaGGAGAACTGGTCTTCCAGATTCTTCTCATTCTCTTCTGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PHCGAPSTQFPTSPA*ENWSSRFFSFSSAC Trigger: GCAAGCAGAAGAGAATGAGAAGAATCTGGAAGACCAGTTCTCCAAGGCTGGAGATGTGGGAAACTGTGTGCTGGGGGCACCGCAGTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS GCA 72 bp | TTGCTGGCACTGAGTTTCCCTTTGGATTTCCTTGTCTaGCTGCCGTGGATCTCGTTCCGGGAGAATCGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLALSFPLDFLV*LPWISFRENRH Trigger: GTGGCGATTCTCCCGGAACGAGATCCACGGCAGGCAGACAAGGAAATCCAAAGGGAAACTCAGTGCCAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS CAA 72 bp | AAGGTGCATTTCACATCCCTGGCATCTTCAACACTGTaGGCAACAGGCTTGAGACGCCGGCTGCCTGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: KVHFTSLASSTL*ATGLRRRLPAE Trigger: CTCAGCAGGCAGCCGGCGTCTCAAGCCTGTTGCCAACAGTGTTGAAGATGCCAGGGATGTGAAATGCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS CAA 72 bp | ATCTGCTTGGTGGACACGTTCCCTTCCCTGGTAGTCTaGAGTATAGGCGTTGGCAGCACACAGGTGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ICLVDTFPSLVV*SIGVGSTQVSC Trigger: GCAGCTCACCTGTGTGCTGCCAACGCCTATACTCAAGACTACCAGGGAAGGGAACGTGTCCACCAAGCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
||
| CDS TCA 72 bp | CGTGAAGCTCAGCCTTCTGAGACCTGTTGGTTTTCTTaGCCAGGATGGCCCGAAAGATGTGTTCCAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: REAQPSETCWFS*PGWPERCVPGG Trigger: TCCTCCTGGAACACATCTTTCGGGCCATCCTGGTCAAGAAAACCAACAGGTCTCAGAAGGCTGAGCTTCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
||
| CDS CCA 72 bp | CTGAGTTTCCCTTTGGATTTCCTTGTCTGCCTGCCGTaGATCTCGTTCCGGGAGAATCGCCACTGGAACTTA | + |
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Preference number: 6 (lower is better) Translates to: LSFPLDFLVCLP*ISFRENRHWNL Trigger: TAAGTTCCAGTGGCGATTCTCCCGGAACGAGATCCACGGCAGGCAGACAAGGAAATCCAAAGGGAAACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| CDS CAA 72 bp | TCTGCTTGCTGCTTGTTGCTGGCACTGAGTTTCCCTTaGGATTTCCTTGTCTGCCTGCCGTGGATCTCGTTC | + |
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Preference number: 6 (lower is better) Translates to: SACCLLLALSFP*DFLVCLPWISF Trigger: GAACGAGATCCACGGCAGGCAGACAAGGAAATCCAAAGGGAAACTCAGTGCCAGCAACAAGCAGCAAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| CDS CAA 90 bp | TCATTCTCTTCTGCTTGCTGCTTGTTGCTGGCACTGAGTTTCCCTTaGGATTTCCTTGTCTGCCTGCCGTGGATCTCGTTCCGGGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: SFSSACCLLLALSFP*DFLVCLPWISFREN Trigger: ATTCTCCCGGAACGAGATCCACGGCAGGCAGACAAGGAAATCCAAAGGGAAACTCAGTGCCAGCAACAAGCAGCAAGCAGAAGAGAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| CDS TCA 72 bp | TCTCATTCTCTTCTGCTTGCTGCTTGTTGCTGGCACTaGGTTTCCCTTTGGATTTCCTTGTCTGCCTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: SHSLLLAACCWH*VSLWISLSACR Trigger: ACGGCAGGCAGACAAGGAAATCCAAAGGGAAACTCAGTGCCAGCAACAAGCAGCAAGCAGAAGAGAATGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| CDS CAA 90 bp | AGCCTTGGAGAACTGGTCTTCCAGATTCTTCTCATTCTCTTCTGCTaGCTGCTTGTTGCTGGCACTGAGTTTCCCTTTGGATTTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SLGELVFQILLILFC*LLVAGTEFPFGFPC Trigger: ACAAGGAAATCCAAAGGGAAACTCAGTGCCAGCAACAAGCAGCAAGCAGAAGAGAATGAGAAGAATCTGGAAGACCAGTTCTCCAAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| CDS CAA 72 bp | GAACTGGTCTTCCAGATTCTTCTCATTCTCTTCTGCTaGCTGCTTGTTGCTGGCACTGAGTTTCCCTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: ELVFQILLILFC*LLVAGTEFPFG Trigger: TCCAAAGGGAAACTCAGTGCCAGCAACAAGCAGCAAGCAGAAGAGAATGAGAAGAATCTGGAAGACCAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044503.14 ENSMUST00000113195.8 |
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| CDS TCA 72 bp | ATCTACTTTGGTCTCCACCTGAGGTCTCTTCAGAGTTaGATAAATGTTCCCAGGCCGCTTTTCTTCACGTTT | + |
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Preference number: 6 (lower is better) Translates to: IYFGLHLRSLQS*INVPRPLFFTF Trigger: AAACGTGAAGAAAAGCGGCCTGGGAACATTTATTCAACTCTGAAGAGACCTCAGGTGGAGACCAAAGTAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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| CDS CCA 72 bp | ACTCTAGAAAGCAGTACTCATAGGTCACATCTACTTTaGTCTCCACCTGAGGTCTCTTCAGAGTTGAATAAA | + |
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Preference number: 6 (lower is better) Translates to: TLESSTHRSHLL*SPPEVSSELNK Trigger: TTTATTCAACTCTGAAGAGACCTCAGGTGGAGACCAAAGTAGATGTGACCTATGAGTACTGCTTTCTAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044503.14 |
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