Pregenerated sensors for RFT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052395Ensembl transcript IDs: ENSMUST00000064230.16, ENSMUST00000226817.2, ENSMUST00000228686.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTAGTAATCCCAGCACTGAGAATGAACACCCCAAGAAGAACTGGTaGCAGGCGCAGGCCAGCCAGGGGTCTGTGAGGGCTCTCTCGGAA | + |
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Preference number: 1 (lower is better) Translates to: TSNPSTENEHPKKNW*QAQASQGSVRALSE Trigger: TTCCGAGAGAGCCCTCACAGACCCCTGGCTGGCCTGCGCCTGTCACCAGTTCTTCTTGGGGTGTTCATTCTCAGTGCTGGGATTACTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR TCA 90 bp | TGCCAGCCTAGCTGGCCAGCCCCTCTCACAGCAGAGGAATGCCTCTaGGACACTAGTAATCCCAGCACTGAGAATGAACACCCCAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: CQPSWPAPLTAEECL*DTSNPSTENEHPKK Trigger: CTTCTTGGGGTGTTCATTCTCAGTGCTGGGATTACTAGTGTCTCAGAGGCATTCCTCTGCTGTGAGAGGGGCTGGCCAGCTAGGCTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR TCA 90 bp | CAAAGCCAAAAACAGTCATGGTCAGTCCAGTCAGCAAGGCCAGCTTaGGGAGGGACTCCAAAACCGCAGCAGCCACAGCAACATCGTCCT | + |
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Preference number: 1 (lower is better) Translates to: QSQKQSWSVQSARPA*GGTPKPQQPQQHRP Trigger: AGGACGATGTTGCTGTGGCTGCTGCGGTTTTGGAGTCCCTCCTCAAGCTGGCCTTGCTGACTGGACTGACCATGACTGTTTTTGGCTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228686.2 |
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| 3UTR CCA 90 bp | GTCTTCACTGAAAAGGCGCTCCTGCTTTGGTGGGAAGCCTTGGACTaGAGATCTGTCCTCTGTAGTCTCTCCTCCAGGCTGATCCTGACT | + |
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Preference number: 1 (lower is better) Translates to: VFTEKALLLWWEALD*RSVLCSLSSRLILT Trigger: AGTCAGGATCAGCCTGGAGGAGAGACTACAGAGGACAGATCTCCAGTCCAAGGCTTCCCACCAAAGCAGGAGCGCCTTTTCAGTGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR TCA 90 bp | AGGGACTCCAAAACCGCAGCAGCCACAGCAACATCGTCCTGCTTCTaGAGTGAGGCGTCCTTCTCTCTCTCTAGCACTTTAGCAAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: RDSKTAAATATSSCF*SEASFSLSSTLAKN Trigger: ATTCTTTGCTAAAGTGCTAGAGAGAGAGAAGGACGCCTCACTTCAGAAGCAGGACGATGTTGCTGTGGCTGCTGCGGTTTTGGAGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228686.2 |
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| 3UTR GCA 90 bp | ACATCAGGGCTTTCCCACAACAACGCATGTCCAAGAACCGTTCTATaGTGGGTCCAGATACCAAAAGTGCCAAAGCGTCACCAAAGTCAT | + |
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Preference number: 1 (lower is better) Translates to: TSGLSHNNACPRTVL*WVQIPKVPKRHQSH Trigger: ATGACTTTGGTGACGCTTTGGCACTTTTGGTATCTGGACCCAGCATAGAACGGTTCTTGGACATGCGTTGTTGTGGGAAAGCCCTGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR TCA 90 bp | CACCAAAGTCATGTCATTTTGTCACTGAGTCTGGATCTACCCAACTaGGTCCTGAGAAAGTGGATCAGCTTGGTCTCTGTGAGGAACGCT | + |
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Preference number: 1 (lower is better) Translates to: HQSHVILSLSLDLPN*VLRKWISLVSVRNA Trigger: AGCGTTCCTCACAGAGACCAAGCTGATCCACTTTCTCAGGACTCAGTTGGGTAGATCCAGACTCAGTGACAAAATGACATGACTTTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR TCA 90 bp | TCAAAGGGAACTAGTTCATTAACAAAAAGGGTTTTTGGTCTTCACTaGAAAGGCGCTCCTGCTTTGGTGGGAAGCCTTGGACTGGAGATC | + |
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Preference number: 1 (lower is better) Translates to: SKGTSSLTKRVFGLH*KGAPALVGSLGLEI Trigger: GATCTCCAGTCCAAGGCTTCCCACCAAAGCAGGAGCGCCTTTTCAGTGAAGACCAAAAACCCTTTTTGTTAATGAACTAGTTCCCTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTGCGCTCCTGCTTTGGTaGGAAGCCTTGGACTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GWPRTQKSAYLCLPSAGIALLLW*EALDWR Trigger: TCTCCAGTCCAAGGCTTCCCACCAAAGCAGGAGCGC...AATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR GCA 90 bp | TTGAGACAGCTCTGGCTGTCCTGGAACTTGGATATTCGTCTGCCTCTGCCTCTGCCCCACAGCGATGTGTaGCAGCCTAGCTGGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LRQLWLSWNLDIRLPLPLPHSDV*QPSWPA Trigger: GGCTGGCCAGCTAGGCTGGCACACATCGCTGTGGGG...CAGAGGCAGAGGCAGACGAATATCCAAGTTCCAGGACAGCCAGAGCTGTCTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGAACCGTTCTATGCTGGGTCCAGATACCAAAAGTGCCAAAGCGTCACCAACCCCACAGCGATGTGTaGCAGCCTAGCTGGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: PRTVLCWVQIPKVPKRHQPHSDV*QPSWPA Trigger: GGCTGGCCAGCTAGGCTGGCACACATCGCTGTGGGG...TTGGTGACGCTTTGGCACTTTTGGTATCTGGACCCAGCATAGAACGGTTCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTACCACCACTACCCGGCTaGAAGCCACAATTTTTACAC | + |
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Preference number: 2 (lower is better) Translates to: AGLELRNPPTSASRVLGLPPLPG*KPQFLH Trigger: GTGTAAAAATTGTGGCTTTCAGCCGGGTAGTGGTGG...TAATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGGCCAGCTTGAGGAGGGACTCCAAAACCGCAGCAGCCACAGCAACATCGTCCACTGCCACACCAACTaGTCAGCAGGTAGGATAAGA | + |
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Preference number: 2 (lower is better) Translates to: QGQLEEGLQNRSSHSNIVHCHTN*SAGRIR Trigger: TCTTATCCTACCTGCTGACCAGTTGGTGTGGCAGTG...GACGATGTTGCTGTGGCTGCTGCGGTTTTGGAGTCCCTCCTCAAGCTGGCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228686.2 |
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| 3UTR-3UTR CCA 90 bp | CCATTCTTGCGGCAGGTCAATGGCTGCATTGCTTTTTCTTGGCCAAACAATGGTGTGTGCCAGCCTAGCTaGCCAGCCCCTCTCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: PFLRQVNGCIAFSWPNNGVCQPS*PAPLTA Trigger: TGCTGTGAGAGGGGCTGGCCAGCTAGGCTGGCACAC...ACCATTGTTTGGCCAAGAAAAAGCAATGCAGCCATTGACCTGCCGCAAGAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR CAA 90 bp | ATGAAGGAAAGACTCTGTGTGATCCGGATGCCCATGTTAAAGCAGTaGGCCATGATGAAGCCCACACTGCCACACCAACTGGTCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: MKERLCVIRMPMLKQ*AMMKPTLPHQLVSR Trigger: CCTGCTGACCAGTTGGTGTGGCAGTGTGGGCTTCATCATGGCCAACTGCTTTAACATGGGCATCCGGATCACACAGAGTCTTTCCTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR TCA 90 bp | GAGACACTAGTAATCCCAGCACTGAGAATGAACACCCCAAGAAGAACTGGTGACTCAGCTTGGTCTCTGTaGGGAACGCTGTCCCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: ETLVIPALRMNTPRRTGDSAWSL*GTLSQE Trigger: CTCTTGGGACAGCGTTCCTCACAGAGACCAAGCTGA...GTCACCAGTTCTTCTTGGGGTGTTCATTCTCAGTGCTGGGATTACTAGTGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTGATCCTGACTCCACATCAGGGCTTTCCCACAACAACGCATGTCCAAGAATATTCGTCTGCCTCTaGCTCTGGCTCTTAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: QADPDSTSGLSHNNACPRIFVCL*LWLLSA Trigger: AGCACTTAAGAGCCAGAGGCAGAGGCAGACGAATAT...TCTTGGACATGCGTTGTTGTGGGAAAGCCCTGATGTGGAGTCAGGATCAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR CCA 90 bp | GGCGGCAAACATGAAACACTCGGTCACACCATTGATAGCAAGCAGGAGGACATACTCTCCTCTACTGGCTaGAAAATTAGCCTGGCCACA | + |
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Preference number: 2 (lower is better) Translates to: GGKHETLGHTIDSKQEDILSSTG*KISLAT Trigger: TGTGGCCAGGCTAATTTTCCAGCCAGTAGAGGAGAG...TATGTCCTCCTGCTTGCTATCAATGGTGTGACCGAGTGTTTCATGTTTGCCGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228686.2 |
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| 3UTR CAA 90 bp | AGATCCCGAACTAAGCATGGCTCCTCCATAGATGTCCAAAGCCAGTaGGGAATAGGCAAAGCCAAAAACAGTCATGGTCAGTCCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: RSRTKHGSSIDVQSQ*GIGKAKNSHGQSSQ Trigger: CTGACTGGACTGACCATGACTGTTTTTGGCTTTGCCTATTCCCAACTGGCTTTGGACATCTATGGAGGAGCCATGCTTAGTTCGGGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228686.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCTCCTTACTTCTTTTATAGAAGAAACTAACCATTCTTGCGGCAGGTCAATGGTCCTGCTTCTGAAGTaGGGCGTCCTTCTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GLLTSFIEETNHSCGRSMVLLLK*GVLLSL Trigger: GAGAGAGAGAAGGACGCCTCACTTCAGAAGCAGGAC...CATTGACCTGCCGCAAGAATGGTTAGTTTCTTCTATAAAAGAAGTAAGGAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228686.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGTCCAGATACCAAAAGTGCCAAAGCGTCACCAAAGTCATGTCATTTTGTCACTGCCACACCAACTaGTCAGCAGGTAGGATAAGA | + |
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Preference number: 2 (lower is better) Translates to: AGSRYQKCQSVTKVMSFCHCHTN*SAGRIR Trigger: TCTTATCCTACCTGCTGACCAGTTGGTGTGGCAGTG...ACAAAATGACATGACTTTGGTGACGCTTTGGCACTTTTGGTATCTGGACCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCCACCACTACCCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTGCTGGAAAATTAGCCTaGCCACAAGGGAGCCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: VCHHYPAESHNFYTMICSAGKLA*PQGSQD Trigger: ATCTTGGCTCCCTTGTGGCCAGGCTAATTTTCCAGC...AGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGGGTAGTGGTGGCACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228686.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAAAAGTGCCAAAGCGTCACCAAAGTCATGTCATTTTGTCACTGAGTCTGGACCACCACTACCCGGCTaGAAGCCACAATTTTTACAC | + |
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Preference number: 2 (lower is better) Translates to: TKSAKASPKSCHFVTESGPPLPG*KPQFLH Trigger: GTGTAAAAATTGTGGCTTTCAGCCGGGTAGTGGTGG...TCCAGACTCAGTGACAAAATGACATGACTTTGGTGACGCTTTGGCACTTTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR CCA 90 bp | ACCATGATTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTTTAGCGCTCCTGCTTTGGTaGGAAGCCTTGGACTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: TMICSCLVYNFRGSLLLLALLLW*EALDWR Trigger: TCTCCAGTCCAAGGCTTCCCACCAAAGCAGGAGCGC...TAAAAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAACAAATCATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGTCCAGATACCAAAAGTGCCAAAGCGTCACCAAAGTCATGTCATTTTGTATGTCATTTTGTCACTaGGTCTGGATCTACCCAACT | + |
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Preference number: 2 (lower is better) Translates to: AGSRYQKCQSVTKVMSFCMSFCH*VWIYPT Trigger: AGTTGGGTAGATCCAGACTCAGTGACAAAATGACAT...ACAAAATGACATGACTTTGGTGACGCTTTGGCACTTTTGGTATCTGGACCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTGCCACCACTACCCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTGGTCAATGGCTGCATTaGTTTTTCTTGGCCAAACAA | + |
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Preference number: 2 (lower is better) Translates to: VCHHYPAESHNFYTMICSGQWLH*FFLAKQ Trigger: TTGTTTGGCCAAGAAAAAGCAATGCAGCCATTGACC...AGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGGGTAGTGGTGGCACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR GCA 90 bp | GTGATGGATGAAGGAAAGACTCTGTGTGATCCGGATGCCCATGTTAAAGCAGTTGGTCAATGGCTGCATTaGTTTTTCTTGGCCAAACAA | + |
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Preference number: 2 (lower is better) Translates to: VMDEGKTLCDPDAHVKAVGQWLH*FFLAKQ Trigger: TTGTTTGGCCAAGAAAAAGCAATGCAGCCATTGACC...AACTGCTTTAACATGGGCATCCGGATCACACAGAGTCTTTCCTTCATCCATCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR TCA 90 bp | CACAATTTTTACACCATGATTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCGTTTTTGGTCTTCACTaGAAAGGCGCTCCTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: HNFYTMICSCLVYNFRGSVFGLH*KGAPAL Trigger: CAAAGCAGGAGCGCCTTTTCAGTGAAGACCAAAAAC...GGAGCCCCTGAAGTTATACACCAAACAAGAACAAATCATGGTGTAAAAATTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTTTATAGAAGAAACGTTTTTGGTCTTCACTaGAAAGGCGCTCCTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: VLVWCITSGAPYFFYRRNVFGLH*KGAPAL Trigger: CAAAGCAGGAGCGCCTTTTCAGTGAAGACCAAAAAC...GTTTCTTCTATAAAAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR CCA 90 bp | CCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTTGTTTGGTGTATAACTTTTTGAGACAGCTCTaGCTGTCCTGGAACTTGGAT | + |
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Preference number: 2 (lower is better) Translates to: PAESHNFYTMICSCLVYNFLRQL*LSWNLD Trigger: ATCCAAGTTCCAGGACAGCCAGAGCTGTCTCAAAAA...GTTATACACCAAACAAGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR TCA 90 bp | ACCATGATTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTTTAATGTCATTTTGTCACTaGGTCTGGATCTACCCAACT | + |
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Preference number: 2 (lower is better) Translates to: TMICSCLVYNFRGSLLLLMSFCH*VWIYPT Trigger: AGTTGGGTAGATCCAGACTCAGTGACAAAATGACAT...TAAAAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAACAAATCATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR TCA 72 bp | CCCAGCACTGAGAATGAACACCCCAAGAAGAACTGGTaGCAGGCGCAGGCCAGCCAGGGGTCTGTGAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: PSTENEHPKKNW*QAQASQGSVRA Trigger: AGCCCTCACAGACCCCTGGCTGGCCTGCGCCTGTCACCAGTTCTTCTTGGGGTGTTCATTCTCAGTGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGCTCCTGCTTaGGTGGGAAGCCTTGGACTG | + |
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Preference number: 3 (lower is better) Translates to: GWPRTQKSAYLCLPSAGIKGAPA*VGSLGL Trigger: CAGTCCAAGGCTTCCCACCAAAGCAGGAGCGCCTTT...AATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTAAAAGGCGCTCCTGCTTaGGTGGGAAGCCTTGGACTG | + |
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Preference number: 3 (lower is better) Translates to: AGLELRNPPTSASRVLGLKGAPA*VGSLGL Trigger: CAGTCCAAGGCTTCCCACCAAAGCAGGAGCGCCTTT...TAATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTCCCATGTTAAAGCAGTaGGCCATGATGAAGCCCACA | + |
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Preference number: 3 (lower is better) Translates to: GWPRTQKSAYLCLPSAGIPMLKQ*AMMKPT Trigger: TGTGGGCTTCATCATGGCCAACTGCTTTAACATGGG...AATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR TCA 72 bp | AAACAGTCATGGTCAGTCCAGTCAGCAAGGCCAGCTTaGGGAGGGACTCCAAAACCGCAGCAGCCACAGCAA | + |
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Preference number: 3 (lower is better) Translates to: KQSWSVQSARPA*GGTPKPQQPQQ Trigger: TTGCTGTGGCTGCTGCGGTTTTGGAGTCCCTCCTCAAGCTGGCCTTGCTGACTGGACTGACCATGACTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228686.2 |
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| 3UTR CCA 72 bp | TCACTGAAAAGGCGCTCCTGCTTTGGTGGGAAGCCTTaGACTGGAGATCTGTCCTCTGTAGTCTCTCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SLKRRSCFGGKP*TGDLSSVVSPP Trigger: TGGAGGAGAGACTACAGAGGACAGATCTCCAGTCCAAGGCTTCCCACCAAAGCAGGAGCGCCTTTTCAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGAGACAGCTCTGGCTGTCCTGGAACTTGGATATTCGTCTGCCTCTGCCTCTAGAAAGTGGATCAGCTaGGTCTCTGTGAGGAACGCT | + |
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Preference number: 3 (lower is better) Translates to: FETALAVLELGYSSASASRKWIS*VSVRNA Trigger: AGCGTTCCTCACAGAGACCAAGCTGATCCACTTTCT...AGAGGCAGAGGCAGACGAATATCCAAGTTCCAGGACAGCCAGAGCTGTCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR GCA 72 bp | TCTGGCTGTCCTGGAACTTGGATATTCGTCTGCCTCTaGCTCTGGCTCTTAAGTGCTGGGATTAAAGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: SGCPGTWIFVCL*LWLLSAGIKGV Trigger: CACACCTTTAATCCCAGCACTTAAGAGCCAGAGGCAGAGGCAGACGAATATCCAAGTTCCAGGACAGCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR GCA 72 bp | GACAGCTCTGGCTGTCCTGGAACTTGGATATTCGTCTaGCTCTGCCTCTGGCTCTTAAGTGCTGGGATTAAA | + |
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Preference number: 3 (lower is better) Translates to: DSSGCPGTWIFV*LCLWLLSAGIK Trigger: TTTAATCCCAGCACTTAAGAGCCAGAGGCAGAGGCAGACGAATATCCAAGTTCCAGGACAGCCAGAGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTACTGCATTGCTTTTTCTaGGCCAAACAATGGTTAAAT | + |
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Preference number: 3 (lower is better) Translates to: AGLELRNPPTSASRVLGLLHCFF*AKQWLN Trigger: ATTTAACCATTGTTTGGCCAAGAAAAAGCAATGCAG...TAATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGAGACAGCTCTGGCTGTCCTGGAACTTGGATATTCGTCTGCCTCTGCCTCTGATGTCCAAAGCCAGTaGGGAATAGGCAAAGCCAAA | + |
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Preference number: 3 (lower is better) Translates to: FETALAVLELGYSSASASDVQSQ*GIGKAK Trigger: TTTGGCTTTGCCTATTCCCAACTGGCTTTGGACATC...AGAGGCAGAGGCAGACGAATATCCAAGTTCCAGGACAGCCAGAGCTGTCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228686.2 |
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| 3UTR GCA 72 bp | CTTTCCCACAACAACGCATGTCCAAGAACCGTTCTATaGTGGGTCCAGATACCAAAAGTGCCAAAGCGTCAC | + |
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Preference number: 3 (lower is better) Translates to: LSHNNACPRTVL*WVQIPKVPKRH Trigger: GTGACGCTTTGGCACTTTTGGTATCTGGACCCAGCATAGAACGGTTCTTGGACATGCGTTGTTGTGGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| 3UTR GCA 72 bp | TGCCTCTGGCTCTTAAGTGCTGGGATTAAAGGTGTGTaGCACCACTACCCGGCTGAAAGCCACAATTTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: CLWLLSAGIKGV*HHYPAESHNFY Trigger: GTAAAAATTGTGGCTTTCAGCCGGGTAGTGGTGGCACACACCTTTAATCCCAGCACTTAAGAGCCAGAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| 3UTR CCA 72 bp | TCCCACAACAACGCATGTCCAAGAACCGTTCTATGCTaGGTCCAGATACCAAAAGTGCCAAAGCGTCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: SHNNACPRTVLC*VQIPKVPKRHQ Trigger: TTGGTGACGCTTTGGCACTTTTGGTATCTGGACCCAGCATAGAACGGTTCTTGGACATGCGTTGTTGTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| 3UTR TCA 72 bp | ACTAGTTCATTAACAAAAAGGGTTTTTGGTCTTCACTaGAAAGGCGCTCCTGCTTTGGTGGGAAGCCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TSSLTKRVFGLH*KGAPALVGSLG Trigger: TCCAAGGCTTCCCACCAAAGCAGGAGCGCCTTTTCAGTGAAGACCAAAAACCCTTTTTGTTAATGAACTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| 3UTR TCA 72 bp | ACCACTACCCGGCTGAAAGCCACAATTTTTACACCATaGTTTGTTCTTGTTTGGTGTATAACTTCAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TTTRLKATIFTP*FVLVWCITSGA Trigger: AGCCCCTGAAGTTATACACCAAACAAGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGGGTAGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGCCACCACTACCCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTCTGCATTGCTTTTTCTaGGCCAAACAATGGTTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VCHHYPAESHNFYTMICSLHCFF*AKQWLN Trigger: ATTTAACCATTGTTTGGCCAAGAAAAAGCAATGCAG...AGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGGGTAGTGGTGGCACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| 3UTR GCA 72 bp | CTCCTTACTTCTTTTATAGAAGAAACTAACCATTCTTaGGGCAGGTCAATGGCTGCATTGCTTTTTCTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLTSFIEETNHS*GRSMAALLFLG Trigger: GCCAAGAAAAAGCAATGCAGCCATTGACCTGCCGCAAGAATGGTTAGTTTCTTCTATAAAAGAAGTAAGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCATGATTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTTTAAGGTCAATGGCTGCATaGCTTTTTCTTGGCCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: TMICSCLVYNFRGSLLLLRSMAA*LFLGQT Trigger: TGTTTGGCCAAGAAAAAGCAATGCAGCCATTGACCT...TAAAAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAACAAATCATGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAATTTTTACACCATGATTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCATGATTTGTTCTTGTTaGGTGTATAACTTCAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HNFYTMICSCLVYNFRGSMICSC*VYNFRG Trigger: GCCCCTGAAGTTATACACCAAACAAGAACAAATCAT...GGAGCCCCTGAAGTTATACACCAAACAAGAACAAATCATGGTGTAAAAATTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCATGATTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTTTAATGATTTGTTCTTGTTaGGTGTATAACTTCAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TMICSCLVYNFRGSLLLLMICSC*VYNFRG Trigger: GCCCCTGAAGTTATACACCAAACAAGAACAAATCAT...TAAAAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAACAAATCATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTTTATAGAAGACAAAGTCATGTCATTTaGTCACTGAGTCTGGATCTA | + |
|
Preference number: 3 (lower is better) Translates to: FVLVWCITSGAPYFFYRRQSHVI*SLSLDL Trigger: TAGATCCAGACTCAGTGACAAAATGACATGACTTTG...TCTTCTATAAAAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAACAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGACAGCTCTGGCTGTCCTGGAACTTGGATATTCGTCTGCCTCTGCCTCTGGCCAACCGGGCCGCCTaGCCTAGCACCTCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRQLWLSWNLDIRLPLPLANRAA*PSTSWL Trigger: CAGCCAGGAGGTGCTAGGCCAGGCGGCCCGGTTGGC...CAGAGGCAGAGGCAGACGAATATCCAAGTTCCAGGACAGCCAGAGCTGTCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTAGTGTGCCAGCCTAGCTaGCCAGCCCCTCTCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGLELRNPPTSASRVLGLVCQPS*PAPLTA Trigger: TGCTGTGAGAGGGGCTGGCCAGCTAGGCTGGCACAC...TAATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064230.16 |
||
| CDS-3UTR TCA 90 bp | GGCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTTTAGCCACAGGAGGTTaGGGGTCTGACTCCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GWPRTQKSAYLCLPSAGILATGG*GSDSSP Trigger: GGGACTGGAGTCAGACCCTCAACCTCCTGTGGCTAA...AATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | GATGCCCATGTTAAAGCAGTTGGCCATGATGAAGCCCACACTGCCACACCAACTGCCAACCGGGCCGCCTaGCCTAGCACCTCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DAHVKAVGHDEAHTATPTANRAA*PSTSWL Trigger: CAGCCAGGAGGTGCTAGGCCAGGCGGCCCGGTTGGC...AGTTGGTGTGGCAGTGTGGGCTTCATCATGGCCAACTGCTTTAACATGGGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | ATGTTAAAGCAGTTGGCCATGATGAAGCCCACACTGCCACACCAACTGGTCAGCAGGAGGTTGAGGGTCTaGCTCCAGTCCCGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MLKQLAMMKPTLPHQLVSRRLRV*LQSRWA Trigger: TGCCCAGCGGGACTGGAGTCAGACCCTCAACCTCCT...GCTGACCAGTTGGTGTGGCAGTGTGGGCTTCATCATGGCCAACTGCTTTAACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | GAAGCCTTGGACTGGAGATCTGTCCTCTGTAGTCTCTCCTCCAGGCTGATCCTGTTAGCCACAGGAGGTTaGGGGTCTGACTCCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EALDWRSVLCSLSSRLILLATGG*GSDSSP Trigger: GGGACTGGAGTCAGACCCTCAACCTCCTGTGGCTAA...CAGGATCAGCCTGGAGGAGAGACTACAGAGGACAGATCTCCAGTCCAAGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR GCA 90 bp | CTGACTCCACATCAGGGCTTTCCCACAACAACGCATGTCCAAGAACCGTTCTATCCCCACAGCGATGTGTaGCAGCCTAGCTGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTPHQGFPTTTHVQEPFYPHSDV*QPSWPA Trigger: GGCTGGCCAGCTAGGCTGGCACACATCGCTGTGGGG...ATAGAACGGTTCTTGGACATGCGTTGTTGTGGGAAAGCCCTGATGTGGAGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064230.16 |
||
| CDS-3UTR CCA 90 bp | GGCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTCACTGCCACACCAACTaGTCAGCAGGTAGGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GWPRTQKSAYLCLPSAGIHCHTN*SAGRIR Trigger: TCTTATCCTACCTGCTGACCAGTTGGTGTGGCAGTG...AATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064230.16 |
||
| CDS-3UTR TCA 90 bp | TTGAGACAGCTCTGGCTGTCCTGGAACTTGGATATTCGTCTGCCTCTGCCTCTGTTAGCCACAGGAGGTTaGGGGTCTGACTCCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRQLWLSWNLDIRLPLPLLATGG*GSDSSP Trigger: GGGACTGGAGTCAGACCCTCAACCTCCTGTGGCTAA...CAGAGGCAGAGGCAGACGAATATCCAAGTTCCAGGACAGCCAGAGCTGTCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGCGGCAGGTCAATGGCTGCATTGCTTTTTCTTGGCCAAACAATGGTTAAAGCCAACCGGGCCGCCTaGCCTAGCACCTCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SCGRSMAALLFLGQTMVKANRAA*PSTSWL Trigger: CAGCCAGGAGGTGCTAGGCCAGGCGGCCCGGTTGGC...TTTAACCATTGTTTGGCCAAGAAAAAGCAATGCAGCCATTGACCTGCCGCAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTAGCCAAAAACAGTCATaGTCAGTCCAGTCAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GWPRTQKSAYLCLPSAGISQKQS*SVQSAR Trigger: CCTTGCTGACTGGACTGACCATGACTGTTTTTGGCT...AATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 |
||
| CDS-3UTR TCA 90 bp | CCATTCTTGCGGCAGGTCAATGGCTGCATTGCTTTTTCTTGGCCAAACAATGGTAGGAGGTTGAGGGTCTaGCTCCAGTCCCGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFLRQVNGCIAFSWPNNGRRLRV*LQSRWA Trigger: TGCCCAGCGGGACTGGAGTCAGACCCTCAACCTCCT...ACCATTGTTTGGCCAAGAAAAAGCAATGCAGCCATTGACCTGCCGCAAGAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR GCA 90 bp | GGCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTACAGGAAGAGTTAGTTaGTTGGCTGATTCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GWPRTQKSAYLCLPSAGITGRVS*LADSGE Trigger: TTCCCCAGAATCAGCCAAGCAACTAACTCTTCCTGT...AATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGTGATCCGGATGCCCATGTTAAAGCAGTTGGCCATGATGAAGCCCACATTCGGAAGGCCTCCCTaGCCAGGAAGGTTGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LCVIRMPMLKQLAMMKPTFGRPP*PGRLWL Trigger: CAACCACAACCTTCCTGGCCAGGGAGGCCTTCCGAA...TGTGGGCTTCATCATGGCCAACTGCTTTAACATGGGCATCCGGATCACACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| 3UTR CAA 72 bp | TTCACTGAAAAGGCGCTCCTGCTTTGGTGGGAAGCCTaGGACTGGAGATCTGTCCTCTGTAGTCTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTEKALLLWWEA*DWRSVLCSLSS Trigger: GGAGGAGAGACTACAGAGGACAGATCTCCAGTCCAAGGCTTCCCACCAAAGCAGGAGCGCCTTTTCAGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTATCAAGAACGACTGTTTaGAGAAGCTCCAAGCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: AGLELRNPPTSASRVLGLSRTTV*RSSKPI Trigger: GATTGGCTTGGAGCTTCTTCAAACAGTCGTTCTTGA...TAATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGTGATCCGGATGCCCATGTTAAAGCAGTTGGCCATGATGAAGCCCACAGGCACTTCAAGCAACTaGAACCAGACCCAGCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCVIRMPMLKQLAMMKPTGTSSN*NQTQPK Trigger: CTTGGGCTGGGTCTGGTTGCAGTTGCTTGAAGTGCC...TGTGGGCTTCATCATGGCCAACTGCTTTAACATGGGCATCCGGATCACACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGAACCGTTCTATGCTGGGTCCAGATACCAAAAGTGCCAAAGCGTCACCAATTCGGAAGGCCTCCCTaGCCAGGAAGGTTGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRTVLCWVQIPKVPKRHQFGRPP*PGRLWL Trigger: CAACCACAACCTTCCTGGCCAGGGAGGCCTTCCGAA...TTGGTGACGCTTTGGCACTTTTGGTATCTGGACCCAGCATAGAACGGTTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| 3UTR CAA 72 bp | AGACTCTGTGTGATCCGGATGCCCATGTTAAAGCAGTaGGCCATGATGAAGCCCACACTGCCACACCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: RLCVIRMPMLKQ*AMMKPTLPHQL Trigger: CAGTTGGTGTGGCAGTGTGGGCTTCATCATGGCCAACTGCTTTAACATGGGCATCCGGATCACACAGAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGATCCTGACTCCACATCAGGGCTTTCCCACAACAACGCATGTCCAAGAACAGTGCCAGCATGGTaGAATTGTACCAGATCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QADPDSTSGLSHNNACPRTVPAW*NCTRSR Trigger: TCGGGATCTGGTACAATTTCACCATGCTGGCACTGT...TCTTGGACATGCGTTGTTGTGGGAAAGCCCTGATGTGGAGTCAGGATCAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226817.2 |
||
| CDS-3UTR GCA 90 bp | GATGCCCATGTTAAAGCAGTTGGCCATGATGAAGCCCACACTGCCACACCAACTAATCGAAACAAGACCTaGAGCAGGAGACCCGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DAHVKAVGHDEAHTATPTNRNKT*SRRPEE Trigger: CTCCTCGGGTCTCCTGCTGCAGGTCTTGTTTCGATT...AGTTGGTGTGGCAGTGTGGGCTTCATCATGGCCAACTGCTTTAACATGGGCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGTGATCCGGATGCCCATGTTAAAGCAGTTGGCCATGATGAAGCCCACAAATCGAAACAAGACCTaGAGCAGGAGACCCGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCVIRMPMLKQLAMMKPTNRNKT*SRRPEE Trigger: CTCCTCGGGTCTCCTGCTGCAGGTCTTGTTTCGATT...TGTGGGCTTCATCATGGCCAACTGCTTTAACATGGGCATCCGGATCACACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGATCCTGACTCCACATCAGGGCTTTCCCACAACAACGCATGTCCAAGAGTAGGGGACCACATCTaGATCAGGCACTTCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QADPDSTSGLSHNNACPRVGDHI*IRHFKQ Trigger: TTGCTTGAAGTGCCTGATCCAGATGTGGTCCCCTAC...TCTTGGACATGCGTTGTTGTGGGAAAGCCCTGATGTGGAGTCAGGATCAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | CCATTCTTGCGGCAGGTCAATGGCTGCATTGCTTTTTCTTGGCCAAACAATGGTTCAGCTTGGTCTCTGTaGGGAACGCTGTCCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PFLRQVNGCIAFSWPNNGSAWSL*GTLSQE Trigger: CTCTTGGGACAGCGTTCCTCACAGAGACCAAGCTGA...ACCATTGTTTGGCCAAGAAAAAGCAATGCAGCCATTGACCTGCCGCAAGAATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064230.16 |
||
| CDS-3UTR TCA 90 bp | TTTGAGACAGCTCTGGCTGTCCTGGAACTTGGATATTCGTCTGCCTCTGCCTCTTACCCAACTGAGTCCTaGGAAAGTGGATCAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FETALAVLELGYSSASASYPTES*ESGSAW Trigger: CCAAGCTGATCCACTTTCTCAGGACTCAGTTGGGTA...AGAGGCAGAGGCAGACGAATATCCAAGTTCCAGGACAGCCAGAGCTGTCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064230.16 |
||
| CDS-3UTR GCA 90 bp | GAAGCCTTGGACTGGAGATCTGTCCTCTGTAGTCTCTCCTCCAGGCTGATCCTGACAGGAAGAGTTAGTTaGTTGGCTGATTCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EALDWRSVLCSLSSRLILTGRVS*LADSGE Trigger: TTCCCCAGAATCAGCCAAGCAACTAACTCTTCCTGT...CAGGATCAGCCTGGAGGAGAGACTACAGAGGACAGATCTCCAGTCCAAGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGTCCAGATACCAAAAGTGCCAAAGCGTCACCAAAGTCATGTCATTTTGTTTCGGAAGGCCTCCCTaGCCAGGAAGGTTGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGSRYQKCQSVTKVMSFCFGRPP*PGRLWL Trigger: CAACCACAACCTTCCTGGCCAGGGAGGCCTTCCGAA...ACAAAATGACATGACTTTGGTGACGCTTTGGCACTTTTGGTATCTGGACCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTAACAGTTGTGTTACTCTaGAGACAGGAAGAGTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGLELRNPPTSASRVLGLTVVLL*RQEELV Trigger: AACTAACTCTTCCTGTCTCCAGAGTAACACAACTGT...TAATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | CCTGACTCCACATCAGGGCTTTCCCACAACAACGCATGTCCAAGAACCGTTCTAGCTGGAAAATTAGCCTaGCCACAAGGGAGCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PDSTSGLSHNNACPRTVLAGKLA*PQGSQD Trigger: ATCTTGGCTCCCTTGTGGCCAGGCTAATTTTCCAGC...TAGAACGGTTCTTGGACATGCGTTGTTGTGGGAAAGCCCTGATGTGGAGTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGATCCTGACTCCACATCAGGGCTTTCCCACAACAACGCATGTCCAAGATCAAGAACGACTGTTTaGAGAAGCTCCAAGCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: QADPDSTSGLSHNNACPRSRTTV*RSSKPI Trigger: GATTGGCTTGGAGCTTCTTCAAACAGTCGTTCTTGA...TCTTGGACATGCGTTGTTGTGGGAAAGCCCTGATGTGGAGTCAGGATCAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGCCACCACTACCCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTGGCACTTCAAGCAACTaGAACCAGACCCAGCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCHHYPAESHNFYTMICSGTSSN*NQTQPK Trigger: CTTGGGCTGGGTCTGGTTGCAGTTGCTTGAAGTGCC...AGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGGGTAGTGGTGGCACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGGAATGCCTCTGAGACACTAGTAATCCCAGCACTGAGAATGAACACCCCAGTAGGGGACCACATCTaGATCAGGCACTTCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QRNASETLVIPALRMNTPVGDHI*IRHFKQ Trigger: TTGCTTGAAGTGCCTGATCCAGATGTGGTCCCCTAC...TGGGGTGTTCATTCTCAGTGCTGGGATTACTAGTGTCTCAGAGGCATTCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | CCTGACTCCACATCAGGGCTTTCCCACAACAACGCATGTCCAAGAACCGTTCTAGAAGAGTTAGTTGCTTaGCTGATTCTGGGGAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: PDSTSGLSHNNACPRTVLEELVA*LILGNA Trigger: TGCGTTCCCCAGAATCAGCCAAGCAACTAACTCTTC...TAGAACGGTTCTTGGACATGCGTTGTTGTGGGAAAGCCCTGATGTGGAGTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | GTCCCAAGAGTCACTCCTAAGCAGATGGTCCCCACAGCGATGTGTGCCAGCCTATGCTTCTTGAAATACTaGGCAACAGTTGTGTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: VPRVTPKQMVPTAMCASLCFLKY*ATVVLL Trigger: GAGTAACACAACTGTTGCCCAGTATTTCAAGAAGCA...TAGGCTGGCACACATCGCTGTGGGGACCATCTGCTTAGGAGTGACTCTTGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGACAGCTCTGGCTGTCCTGGAACTTGGATATTCGTCTGCCTCTGCCTCTGGCCCACAATCTCCTTTaGCAGGAATCGAAGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRQLWLSWNLDIRLPLPLAHNLL*QESKNK Trigger: TTTATTCTTCGATTCCTGTCAAAGGAGATTGTGGGC...CAGAGGCAGAGGCAGACGAATATCCAAGTTCCAGGACAGCCAGAGCTGTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | CTGACTCCACATCAGGGCTTTCCCACAACAACGCATGTCCAAGAACCGTTCTATAAGTTCCACAACTGCTaGGAGACCAAAGAACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTPHQGFPTTTHVQEPFYKFHNC*ETKEQH Trigger: GTGCTGTTCTTTGGTCTCTCAGCAGTTGTGGAACTT...ATAGAACGGTTCTTGGACATGCGTTGTTGTGGGAAAGCCCTGATGTGGAGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGACAGCTCTGGCTGTCCTGGAACTTGGATATTCGTCTGCCTCTGCCTCTGAAATGCTCTGCTTCTTaGAATACTGGGCAACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRQLWLSWNLDIRLPLPLKCSAS*NTGQQL Trigger: CAACTGTTGCCCAGTATTTCAAGAAGCAGAGCATTT...CAGAGGCAGAGGCAGACGAATATCCAAGTTCCAGGACAGCCAGAGCTGTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAGACAGCTCTGGCTGTCCTGGAACTTGGATATTCGTCTGCCTCTGCCTCTAAACATATGTGCTTGTaGCAAGACCCAGAAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FETALAVLELGYSSASASKHMCL*QDPERL Trigger: GAGCCTTTCTGGGTCTTGGCACAAGCACATATGTTT...AGAGGCAGAGGCAGACGAATATCCAAGTTCCAGGACAGCCAGAGCTGTCTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCCTTGGACTGGAGATCTGTCCTCTGTAGTCTCTCCTCCAGGCTGATCCTGCTTAACAAACATATGTaGTTGTGCCAAGACCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EALDWRSVLCSLSSRLILLNKHM*LCQDPE Trigger: TTCTGGGTCTTGGCACAAGCACATATGTTTGTTAAG...CAGGATCAGCCTGGAGGAGAGACTACAGAGGACAGATCTCCAGTCCAAGGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAGACAGCTCTGGCTGTCCTGGAACTTGGATATTCGTCTGCCTCTGCCTCTACAGGAAGAGTTAGTTaGTTGGCTGATTCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FETALAVLELGYSSASASTGRVS*LADSGE Trigger: TTCCCCAGAATCAGCCAAGCAACTAACTCTTCCTGT...AGAGGCAGAGGCAGACGAATATCCAAGTTCCAGGACAGCCAGAGCTGTCTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGAACCGTTCTATGCTGGGTCCAGATACCAAAAGTGCCAAAGCGTCACCAAAGCCAAAAACAGTCATaGTCAGTCCAGTCAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRTVLCWVQIPKVPKRHQSQKQS*SVQSAR Trigger: CCTTGCTGACTGGACTGACCATGACTGTTTTTGGCT...TTGGTGACGCTTTGGCACTTTTGGTATCTGGACCCAGCATAGAACGGTTCTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGTGATCCGGATGCCCATGTTAAAGCAGTTGGCCATGATGAAGCCCACAAAATGCTCTGCTTCTTaGAATACTGGGCAACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LCVIRMPMLKQLAMMKPTKCSAS*NTGQQL Trigger: CAACTGTTGCCCAGTATTTCAAGAAGCAGAGCATTT...TGTGGGCTTCATCATGGCCAACTGCTTTAACATGGGCATCCGGATCACACAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | CACTACCCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTTGTTTGGTGGTCCTGCTTCTGAAGTaGGGCGTCCTTCTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HYPAESHNFYTMICSCLVVLLLK*GVLLSL Trigger: GAGAGAGAGAAGGACGCCTCACTTCAGAAGCAGGAC...CACCAAACAAGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGGGTAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 |
||
| CDS-3UTR TCA 90 bp | CCTGACTCCACATCAGGGCTTTCCCACAACAACGCATGTCCAAGAACCGTTCTAATGTCATTTTGTCACTaGGTCTGGATCTACCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: PDSTSGLSHNNACPRTVLMSFCH*VWIYPT Trigger: AGTTGGGTAGATCCAGACTCAGTGACAAAATGACAT...TAGAACGGTTCTTGGACATGCGTTGTTGTGGGAAAGCCCTGATGTGGAGTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064230.16 |
||
| CDS-3UTR CCA 90 bp | GTGTGCCACCACTACCCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTCTCTCCTCTACTGGCTaGAAAATTAGCCTGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VCHHYPAESHNFYTMICSLSSTG*KISLAT Trigger: TGTGGCCAGGCTAATTTTCCAGCCAGTAGAGGAGAG...AGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGGGTAGTGGTGGCACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 |
||
| CDS-3UTR CCA 90 bp | GTGATGGATGAAGGAAAGACTCTGTGTGATCCGGATGCCCATGTTAAAGCAGTTCTCTCCTCTACTGGCTaGAAAATTAGCCTGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VMDEGKTLCDPDAHVKAVLSSTG*KISLAT Trigger: TGTGGCCAGGCTAATTTTCCAGCCAGTAGAGGAGAG...AACTGCTTTAACATGGGCATCCGGATCACACAGAGTCTTTCCTTCATCCATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226817.2 |
||
| CDS-3UTR TCA 90 bp | CTGACTCCACATCAGGGCTTTCCCACAACAACGCATGTCCAAGAACCGTTCTATGCCCACAATCTCCTTTaGCAGGAATCGAAGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTPHQGFPTTTHVQEPFYAHNLL*QESKNK Trigger: TTTATTCTTCGATTCCTGTCAAAGGAGATTGTGGGC...ATAGAACGGTTCTTGGACATGCGTTGTTGTGGGAAAGCCCTGATGTGGAGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGCCACCACTACCCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTAAGTTCCACAACTGCTaGGAGACCAAAGAACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VCHHYPAESHNFYTMICSKFHNC*ETKEQH Trigger: GTGCTGTTCTTTGGTCTCTCAGCAGTTGTGGAACTT...AGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGGGTAGTGGTGGCACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | GGCGGCAAACATGAAACACTCGGTCACACCATTGATAGCAAGCAGGAGGACATAAAATGCTCTGCTTCTTaGAATACTGGGCAACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGKHETLGHTIDSKQEDIKCSAS*NTGQQL Trigger: CAACTGTTGCCCAGTATTTCAAGAAGCAGAGCATTT...TATGTCCTCCTGCTTGCTATCAATGGTGTGACCGAGTGTTTCATGTTTGCCGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228686.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGACTCTGTGTGATCCGGATGCCCATGTTAAAGCAGTTGGCCATGATGAAGAAACATATGTGCTTGTaGCAAGACCCAGAAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ERLCVIRMPMLKQLAMMKKHMCL*QDPERL Trigger: GAGCCTTTCTGGGTCTTGGCACAAGCACATATGTTT...CTTCATCATGGCCAACTGCTTTAACATGGGCATCCGGATCACACAGAGTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | GTGATGGATGAAGGAAAGACTCTGTGTGATCCGGATGCCCATGTTAAAGCAGTTGAAGAGTTAGTTGCTTaGCTGATTCTGGGGAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: VMDEGKTLCDPDAHVKAVEELVA*LILGNA Trigger: TGCGTTCCCCAGAATCAGCCAAGCAACTAACTCTTC...AACTGCTTTAACATGGGCATCCGGATCACACAGAGTCTTTCCTTCATCCATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| 3UTR CAA 72 bp | ACTAAGCATGGCTCCTCCATAGATGTCCAAAGCCAGTaGGGAATAGGCAAAGCCAAAAACAGTCATGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKHGSSIDVQSQ*GIGKAKNSHGQ Trigger: CTGACCATGACTGTTTTTGGCTTTGCCTATTCCCAACTGGCTTTGGACATCTATGGAGGAGCCATGCTTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | TCTTGCGGCAGGTCAATGGCTGCATTGCTTTTTCTTGGCCAAACAATGGTTAAAAAGTTCCACAACTGCTaGGAGACCAAAGAACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SCGRSMAALLFLGQTMVKKFHNC*ETKEQH Trigger: GTGCTGTTCTTTGGTCTCTCAGCAGTTGTGGAACTT...TTTAACCATTGTTTGGCCAAGAAAAAGCAATGCAGCCATTGACCTGCCGCAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | CTGACTCCACATCAGGGCTTTCCCACAACAACGCATGTCCAAGAACCGTTCTATTGCTTCTTGAAATACTaGGCAACAGTTGTGTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: LTPHQGFPTTTHVQEPFYCFLKY*ATVVLL Trigger: GAGTAACACAACTGTTGCCCAGTATTTCAAGAAGCA...ATAGAACGGTTCTTGGACATGCGTTGTTGTGGGAAAGCCCTGATGTGGAGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | TCAACCTCCTCTTTGCTCATGGCGGCAAACATGAAACACTCGGTCACACCATTGTGCTTCTTGAAATACTaGGCAACAGTTGTGTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: STSSLLMAANMKHSVTPLCFLKY*ATVVLL Trigger: GAGTAACACAACTGTTGCCCAGTATTTCAAGAAGCA...CAATGGTGTGACCGAGTGTTTCATGTTTGCCGCCATGAGCAAAGAGGAGGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | GTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTTTATAGAAGAAACGTCCTGCTTCTGAAGTaGGGCGTCCTTCTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLVWCITSGAPYFFYRRNVLLLK*GVLLSL Trigger: GAGAGAGAGAAGGACGCCTCACTTCAGAAGCAGGAC...GTTTCTTCTATAAAAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 |
||
| CDS-3UTR GCA 90 bp | TACACCATGATTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTAATCGAAACAAGACCTaGAGCAGGAGACCCGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YTMICSCLVYNFRGSLLLNRNKT*SRRPEE Trigger: CTCCTCGGGTCTCCTGCTGCAGGTCTTGTTTCGATT...AAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAACAAATCATGGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| CDS-3UTR GCA 90 bp | CAAGAACCGTTCTATGCTGGGTCCAGATACCAAAAGTGCCAAAGCGTCACCAAACCTTCTGTCAAAATCTaGTTCAAGAACGACTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QEPFYAGSRYQKCQSVTKPSVKI*FKNDCL Trigger: CAAACAGTCGTTCTTGAAGCAGATTTTGACAGAAGG...TTTGGTGACGCTTTGGCACTTTTGGTATCTGGACCCAGCATAGAACGGTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | CACTACCCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTTGTTTGGTGTGGCCAGGAAGGTTGTaGTTGAGTAAAGCAGCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HYPAESHNFYTMICSCLVWPGRL*LSKAAL Trigger: TAACGCTGCTTTACTCAACCACAACCTTCCTGGCCA...CACCAAACAAGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGGGTAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | CAGCATGGTGAAATTGTACCTGTCAACCTCCTCTTTGCTCATGGCGGCAAACATACAGTTGTGTTACTCTaGAGACAGGAAGAGTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QHGEIVPVNLLFAHGGKHTVVLL*RQEELV Trigger: AACTAACTCTTCCTGTCTCCAGAGTAACACAACTGT...ATGTTTGCCGCCATGAGCAAAGAGGAGGTTGACAGGTACAATTTCACCATGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGACTCTGTGTGATCCGGATGCCCATGTTAAAGCAGTTGGCCATGATGAAGCATTCAAGACAAAGGTaGTTAATCGAAACAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: ERLCVIRMPMLKQLAMMKHSRQR*LIETRP Trigger: AGGTCTTGTTTCGATTAATCACCTTTGTCTTGAATG...CTTCATCATGGCCAACTGCTTTAACATGGGCATCCGGATCACACAGAGTCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | CACAATTTTTACACCATGATTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCCTGGATCTACCCAACTaGGTCCTGAGAAAGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HNFYTMICSCLVYNFRGSLDLPN*VLRKWI Trigger: GATCCACTTTCTCAGGACTCAGTTGGGTAGATCCAG...GGAGCCCCTGAAGTTATACACCAAACAAGAACAAATCATGGTGTAAAAATTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064230.16 |
||
| CDS-3UTR GCA 90 bp | GGGCTCCTTACTTCTTTTATAGAAGAAACTAACCATTCTTGCGGCAGGTCAATGAAACATATGTGCTTGTaGCAAGACCCAGAAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLLTSFIEETNHSCGRSMKHMCL*QDPERL Trigger: GAGCCTTTCTGGGTCTTGGCACAAGCACATATGTTT...CATTGACCTGCCGCAAGAATGGTTAGTTTCTTCTATAAAAGAAGTAAGGAGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGGTCCAGATACCAAAAGTGCCAAAGCGTCACCAAAGTCATGTCATTTTGTCTTAACAAACATATGTaGTTGTGCCAAGACCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGSRYQKCQSVTKVMSFCLNKHM*LCQDPE Trigger: TTCTGGGTCTTGGCACAAGCACATATGTTTGTTAAG...ACAAAATGACATGACTTTGGTGACGCTTTGGCACTTTTGGTATCTGGACCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | GTGAAATTGTACCTGTCAACCTCCTCTTTGCTCATGGCGGCAAACATGAAACACCATTCAAGACAAAGGTaGTTAATCGAAACAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: VKLYLSTSSLLMAANMKHHSRQR*LIETRP Trigger: AGGTCTTGTTTCGATTAATCACCTTTGTCTTGAATG...GTGTTTCATGTTTGCCGCCATGAGCAAAGAGGAGGTTGACAGGTACAATTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | CACAATTTTTACACCATGATTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCACAGTGCCAGCATGGTaGAATTGTACCTGTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: HNFYTMICSCLVYNFRGSTVPAW*NCTCQP Trigger: AGGTTGACAGGTACAATTTCACCATGCTGGCACTGT...GGAGCCCCTGAAGTTATACACCAAACAAGAACAAATCATGGTGTAAAAATTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064230.16 |
||
| CDS-3UTR GCA 90 bp | TCTTGCGGCAGGTCAATGGCTGCATTGCTTTTTCTTGGCCAAACAATGGTTAAACCTTCTGTCAAAATCTaGTTCAAGAACGACTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCGRSMAALLFLGQTMVKPSVKI*FKNDCL Trigger: CAAACAGTCGTTCTTGAAGCAGATTTTGACAGAAGG...TTTAACCATTGTTTGGCCAAGAAAAAGCAATGCAGCCATTGACCTGCCGCAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTTTATAGAAGAAACGTAGGGGACCACATCTaGATCAGGCACTTCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLVWCITSGAPYFFYRRNVGDHI*IRHFKQ Trigger: TTGCTTGAAGTGCCTGATCCAGATGTGGTCCCCTAC...GTTTCTTCTATAAAAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAGGAAAGACTCTGTGTGATCCGGATGCCCATGTTAAAGCAGTTGGCCATGATTGTATTAAATAGATaGCATAGCAGAGCACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MKERLCVIRMPMLKQLAMIVLNR*HSRAPE Trigger: TTCTGGTGCTCTGCTATGCCATCTATTTAATACAAT...CATGGCCAACTGCTTTAACATGGGCATCCGGATCACACAGAGTCTTTCCTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | CCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTTGTTTGGTGTATAACGAAGAGTTAGTTGCTTaGCTGATTCTGGGGAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: PAESHNFYTMICSCLVYNEELVA*LILGNA Trigger: TGCGTTCCCCAGAATCAGCCAAGCAACTAACTCTTC...GTTATACACCAAACAAGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR GCA 90 bp | CACTACCCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTTGTTTGGTGCTTAACAAACATATGTaGTTGTGCCAAGACCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HYPAESHNFYTMICSCLVLNKHM*LCQDPE Trigger: TTCTGGGTCTTGGCACAAGCACATATGTTTGTTAAG...CACCAAACAAGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGGGTAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | ACCATGATTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTTTATGGCCAGGAAGGTTGTaGTTGAGTAAAGCAGCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TMICSCLVYNFRGSLLLLWPGRL*LSKAAL Trigger: TAACGCTGCTTTACTCAACCACAACCTTCCTGGCCA...TAAAAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAACAAATCATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTTTATAGAAGAGCTGGAAAATTAGCCTaGCCACAAGGGAGCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FVLVWCITSGAPYFFYRRAGKLA*PQGSQD Trigger: ATCTTGGCTCCCTTGTGGCCAGGCTAATTTTCCAGC...TCTTCTATAAAAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 |
||
| CDS-3UTR TCA 90 bp | TTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTTTATAGAAGATCAAGAACGACTGTTTaGAGAAGCTCCAAGCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: FVLVWCITSGAPYFFYRRSRTTV*RSSKPI Trigger: GATTGGCTTGGAGCTTCTTCAAACAGTCGTTCTTGA...TCTTCTATAAAAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | CACTACCCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTTGTTTGGTGATTGTATTAAATAGATaGCATAGCAGAGCACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HYPAESHNFYTMICSCLVIVLNR*HSRAPE Trigger: TTCTGGTGCTCTGCTATGCCATCTATTTAATACAAT...CACCAAACAAGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGGGTAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR TCA 90 bp | CACAATTTTTACACCATGATTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCCATTCAAGACAAAGGTaGTTAATCGAAACAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: HNFYTMICSCLVYNFRGSHSRQR*LIETRP Trigger: AGGTCTTGTTTCGATTAATCACCTTTGTCTTGAATG...GGAGCCCCTGAAGTTATACACCAAACAAGAACAAATCATGGTGTAAAAATTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTTTATAGAAGAAACACAGTTGTGTTACTCTaGAGACAGGAAGAGTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLVWCITSGAPYFFYRRNTVVLL*RQEELV Trigger: AACTAACTCTTCCTGTCTCCAGAGTAACACAACTGT...GTTTCTTCTATAAAAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR GCA 90 bp | TGTAACTTCAAAGGTCAATCACACTCAAAGGGAACTAGTTCATTAACAAAAAGGCCTTCTGTCAAAATCTaGTTCAAGAACGACTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CNFKGQSHSKGTSSLTKRPSVKI*FKNDCL Trigger: CAAACAGTCGTTCTTGAAGCAGATTTTGACAGAAGG...CCTTTTTGTTAATGAACTAGTTCCCTTTGAGTGTGATTGACCTTTGAAGTTACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CCA 90 bp | ACCATGATTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTTTAATTGTATTAAATAGATaGCATAGCAGAGCACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TMICSCLVYNFRGSLLLLIVLNR*HSRAPE Trigger: TTCTGGTGCTCTGCTATGCCATCTATTTAATACAAT...TAAAAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAACAAATCATGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS TCA 90 bp | CAAAATATACCCAGTGGGACAGTTAGCCACAGGAGGTTGAGGGTCTaGCTCCAGTCCCGCTGGGCACCCCCGCTCAGACAAGCTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QNIPSGTVSHRRLRV*LQSRWAPPLRQALR Trigger: CCGAAGAGCTTGTCTGAGCGGGGGTGCCCAGCGGGACTGGAGTCAGACCCTCAACCTCCTGTGGCTAACTGTCCCACTGGGTATATTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | GGCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTCACTCGGTCACACCATaGATAGCAAGCAGGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GWPRTQKSAYLCLPSAGIHSVTP*IASRRT Trigger: TGTCCTCCTGCTTGCTATCAATGGTGTGACCGAGTG...AATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064230.16 |
||
| CDS-3UTR CAA 90 bp | GGCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTAATACTGGGCAACAGTaGTGTTACTCTGGAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWPRTQKSAYLCLPSAGINTGQQ*CYSGDR Trigger: CCTGTCTCCAGAGTAACACAACTGTTGCCCAGTATT...AATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGCCTCGAACTCAGAAATCCGCCTACCTCTGCCTCCCGAGTGCTGGGATTAAATACTGGGCAACAGTaGTGTTACTCTGGAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGLELRNPPTSASRVLGLNTGQQ*CYSGDR Trigger: CCTGTCTCCAGAGTAACACAACTGTTGCCCAGTATT...TAATCCCAGCACTCGGGAGGCAGAGGTAGGCGGATTTCTGAGTTCGAGGCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS GCA 90 bp | AGAATAAATGCATTCAAGACAAAGGTGATTAATCGAAACAAGACCTaGAGCAGGAGACCCGAGGAGGCCAACCGGGCCGCCTGGCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RINAFKTKVINRNKT*SRRPEEANRAAWPS Trigger: GCTAGGCCAGGCGGCCCGGTTGGCCTCCTCGGGTCTCCTGCTGCAGGTCTTGTTTCGATTAATCACCTTTGTCTTGAATGCATTTATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS CCA 90 bp | GAGACCAAAGAACAGCACACCAGTTCCATAGTAGGGGACCACATCTaGATCAGGCACTTCAAGCAACTGCAACCAGACCCAGCCCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ETKEQHTSSIVGDHI*IRHFKQLQPDPAQA Trigger: TGCTTGGGCTGGGTCTGGTTGCAGTTGCTTGAAGTGCCTGATCCAGATGTGGTCCCCTACTATGGAACTGGTGTGCTGTTCTTTGGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGGCTGATCCTGACTCCACATCAGGGCTTTCCCACAACAACGCATGTCCAACCAGGAAGGTTGTGGTaGAGTAAAGCAGCGTTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRLILTPHQGFPTTTHVQPGRLW*SKAALV Trigger: GACTAACGCTGCTTTACTCAACCACAACCTTCCTGG...TTGGACATGCGTTGTTGTGGGAAAGCCCTGATGTGGAGTCAGGATCAGCCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | GTCCCAAGAGTCACTCCTAAGCAGATGGTCCCCACAGCGATGTGTGCCAGCCTAAACAAACATATGTGCTaGTGCCAAGACCCAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPRVTPKQMVPTAMCASLNKHMC*CQDPER Trigger: CCTTTCTGGGTCTTGGCACAAGCACATATGTTTGTT...TAGGCTGGCACACATCGCTGTGGGGACCATCTGCTTAGGAGTGACTCTTGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | CATGTTAAAGCAGTTGGCCATGATGAAGCCCACACTGCCACACCAACTGGTCAGGGAAGAGTTAGTTGCTaGGCTGATTCTGGGGAACGC | + |
|
Preference number: 5 (lower is better) Translates to: HVKAVGHDEAHTATPTGQGRVSC*ADSGER Trigger: GCGTTCCCCAGAATCAGCCAAGCAACTAACTCTTCC...CTGACCAGTTGGTGTGGCAGTGTGGGCTTCATCATGGCCAACTGCTTTAACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGTGTGATCCGGATGCCCATGTTAAAGCAGTTGGCCATGATGAAGCCCACAGGAAGAGTTAGTTGCTaGGCTGATTCTGGGGAACGC | + |
|
Preference number: 5 (lower is better) Translates to: LCVIRMPMLKQLAMMKPTGRVSC*ADSGER Trigger: GCGTTCCCCAGAATCAGCCAAGCAACTAACTCTTCC...TGTGGGCTTCATCATGGCCAACTGCTTTAACATGGGCATCCGGATCACACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGGCTGATCCTGACTCCACATCAGGGCTTTCCCACAACAACGCATGTCCAACCTGCCTCCTTCCAGTaGACAAATGCTCTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRLILTPHQGFPTTTHVQPASFQ*TNALLL Trigger: AAGAAGCAGAGCATTTGTCAACTGGAAGGAGGCAGG...TTGGACATGCGTTGTTGTGGGAAAGCCCTGATGTGGAGTCAGGATCAGCCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | CATGTTAAAGCAGTTGGCCATGATGAAGCCCACACTGCCACACCAACTGGTCAGCCTGCCTCCTTCCAGTaGACAAATGCTCTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HVKAVGHDEAHTATPTGQPASFQ*TNALLL Trigger: AAGAAGCAGAGCATTTGTCAACTGGAAGGAGGCAGG...CTGACCAGTTGGTGTGGCAGTGTGGGCTTCATCATGGCCAACTGCTTTAACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGATCCTGACTCCACATCAGGGCTTTCCCACAACAACGCATGTCCAAGAGATGTCCAAAGCCAGTaGGGAATAGGCAAAGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QADPDSTSGLSHNNACPRDVQSQ*GIGKAK Trigger: TTTGGCTTTGCCTATTCCCAACTGGCTTTGGACATC...TCTTGGACATGCGTTGTTGTGGGAAAGCCCTGATGTGGAGTCAGGATCAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 |
||
| CDS-3UTR CAA 90 bp | CATGTTAAAGCAGTTGGCCATGATGAAGCCCACACTGCCACACCAACTGGTCAGAATACTGGGCAACAGTaGTGTTACTCTGGAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: HVKAVGHDEAHTATPTGQNTGQQ*CYSGDR Trigger: CCTGTCTCCAGAGTAACACAACTGTTGCCCAGTATT...CTGACCAGTTGGTGTGGCAGTGTGGGCTTCATCATGGCCAACTGCTTTAACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | CCTGACTCCACATCAGGGCTTTCCCACAACAACGCATGTCCAAGAACCGTTCTAAACAAACATATGTGCTaGTGCCAAGACCCAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PDSTSGLSHNNACPRTVLNKHMC*CQDPER Trigger: CCTTTCTGGGTCTTGGCACAAGCACATATGTTTGTT...TAGAACGGTTCTTGGACATGCGTTGTTGTGGGAAAGCCCTGATGTGGAGTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCCTTGGACTGGAGATCTGTCCTCTGTAGTCTCTCCTCCAGGCTGATCCTGCTCTCAGCAAGAACCTaGAGCTTAACAAACATATGT | + |
|
Preference number: 5 (lower is better) Translates to: EALDWRSVLCSLSSRLILLSART*SLTNIC Trigger: ACATATGTTTGTTAAGCTCAAGGTTCTTGCTGAGAG...CAGGATCAGCCTGGAGGAGAGACTACAGAGGACAGATCTCCAGTCCAAGGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGCGGCAGGTCAATGGCTGCATTGCTTTTTCTTGGCCAAACAATGGTTAAAGGAAGAGTTAGTTGCTaGGCTGATTCTGGGGAACGC | + |
|
Preference number: 5 (lower is better) Translates to: SCGRSMAALLFLGQTMVKGRVSC*ADSGER Trigger: GCGTTCCCCAGAATCAGCCAAGCAACTAACTCTTCC...TTTAACCATTGTTTGGCCAAGAAAAAGCAATGCAGCCATTGACCTGCCGCAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAGACAGCTCTGGCTGTCCTGGAACTTGGATATTCGTCTGCCTCTGCCTCTCAAATGCTCTGCTTCTaGAAATACTGGGCAACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FETALAVLELGYSSASASQMLCF*KYWATV Trigger: AACTGTTGCCCAGTATTTCAAGAAGCAGAGCATTTG...AGAGGCAGAGGCAGACGAATATCCAAGTTCCAGGACAGCCAGAGCTGTCTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGTCCAGATACCAAAAGTGCCAAAGCGTCACCAAAGTCATGTCATTTTGTCCCTGCCTCCTTCCAGTaGACAAATGCTCTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGPDTKSAKASPKSCHFVPASFQ*TNALLL Trigger: AAGAAGCAGAGCATTTGTCAACTGGAAGGAGGCAGG...GACAAAATGACATGACTTTGGTGACGCTTTGGCACTTTTGGTATCTGGACCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGCCACCACTACCCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTCCCATGTTAAAGCAGTaGGCCATGATGAAGCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VCHHYPAESHNFYTMICSPMLKQ*AMMKPT Trigger: TGTGGGCTTCATCATGGCCAACTGCTTTAACATGGG...AGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGGGTAGTGGTGGCACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064230.16 |
||
| CDS CCA 90 bp | GTTGCTTGGCTGATTCTGGGGAACGCAGTAATTGTATTAAATAGATaGCATAGCAGAGCACCAGAACAGTCGTGTAGAGAAGCTGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VAWLILGNAVIVLNR*HSRAPEQSCREAEP Trigger: TGGCTCAGCTTCTCTACACGACTGTTCTGGTGCTCTGCTATGCCATCTATTTAATACAATTACTGCGTTCCCCAGAATCAGCCAAGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS CCA 90 bp | CAAATGCTCTGCTTCTTGAAATACTGGGCAACAGTTGTGTTACTCTaGAGACAGGAAGAGTTAGTTGCTTGGCTGATTCTGGGGAACGCA | + |
|
Preference number: 5 (lower is better) Translates to: QMLCFLKYWATVVLL*RQEELVAWLILGNA Trigger: TGCGTTCCCCAGAATCAGCCAAGCAACTAACTCTTCCTGTCTCCAGAGTAACACAACTGTTGCCCAGTATTTCAAGAAGCAGAGCATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | CCAAGAACCGTTCTATGCTGGGTCCAGATACCAAAAGTGCCAAAGCGTCACCAATTCAAGAACGACTGTTaGAAGAAGCTCCAAGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PRTVLCWVQIPKVPKRHQFKNDC*KKLQAN Trigger: ATTGGCTTGGAGCTTCTTCAAACAGTCGTTCTTGAA...TTGGTGACGCTTTGGCACTTTTGGTATCTGGACCCAGCATAGAACGGTTCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAGGAAAGACTCTGTGTGATCCGGATGCCCATGTTAAAGCAGTTGGCCATGCAAATGCTCTGCTTCTaGAAATACTGGGCAACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: MKERLCVIRMPMLKQLAMQMLCF*KYWATV Trigger: AACTGTTGCCCAGTATTTCAAGAAGCAGAGCATTTG...CATGGCCAACTGCTTTAACATGGGCATCCGGATCACACAGAGTCTTTCCTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | GTGCCAAAGCGTCACCAAAGTCATGTCATTTTGTCACTGAGTCTGGATCTACCCTTCAAGAACGACTGTTaGAAGAAGCTCCAAGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: VPKRHQSHVILSLSLDLPFKNDC*KKLQAN Trigger: ATTGGCTTGGAGCTTCTTCAAACAGTCGTTCTTGAA...GGGTAGATCCAGACTCAGTGACAAAATGACATGACTTTGGTGACGCTTTGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | CGAACTAAGCATGGCTCCTCCATAGATGTCCAAAGCCAGTTGGGAATAGGCAAACTCTCAGCAAGAACCTaGAGCTTAACAAACATATGT | + |
|
Preference number: 5 (lower is better) Translates to: RTKHGSSIDVQSQLGIGKLSART*SLTNIC Trigger: ACATATGTTTGTTAAGCTCAAGGTTCTTGCTGAGAG...TTTGCCTATTCCCAACTGGCTTTGGACATCTATGGAGGAGCCATGCTTAGTTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | TACACCATGATTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTCTGTCAACCTCCTCTTaGCTCATGGCGGCAAACATG | + |
|
Preference number: 5 (lower is better) Translates to: YTMICSCLVYNFRGSLLLLSTSS*LMAANM Trigger: CATGTTTGCCGCCATGAGCAAAGAGGAGGTTGACAG...AAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAACAAATCATGGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064230.16 |
||
| CDS-3UTR CAA 90 bp | CCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTTGTTTGGTGTATAACCCAGGAAGGTTGTGGTaGAGTAAAGCAGCGTTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PAESHNFYTMICSCLVYNPGRLW*SKAALV Trigger: GACTAACGCTGCTTTACTCAACCACAACCTTCCTGG...GTTATACACCAAACAAGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTTGTTTGGTGTATAACTTCAGGGGCTCCTTACTTCTTTTATAGAAGAAACCCAGGAAGGTTGTGGTaGAGTAAAGCAGCGTTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLVWCITSGAPYFFYRRNPGRLW*SKAALV Trigger: GACTAACGCTGCTTTACTCAACCACAACCTTCCTGG...GTTTCTTCTATAAAAGAAGTAAGGAGCCCCTGAAGTTATACACCAAACAAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | CCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTTGTTTGGTGTATAACGATGTCCAAAGCCAGTaGGGAATAGGCAAAGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PAESHNFYTMICSCLVYNDVQSQ*GIGKAK Trigger: TTTGGCTTTGCCTATTCCCAACTGGCTTTGGACATC...GTTATACACCAAACAAGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 |
||
| CDS-3UTR CAA 90 bp | CACTACCCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTTGTTTGGTGCTCTCAGCAAGAACCTaGAGCTTAACAAACATATGT | + |
|
Preference number: 5 (lower is better) Translates to: HYPAESHNFYTMICSCLVLSART*SLTNIC Trigger: ACATATGTTTGTTAAGCTCAAGGTTCTTGCTGAGAG...CACCAAACAAGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGGGTAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | TGTAACTTCAAAGGTCAATCACACTCAAAGGGAACTAGTTCATTAACAAAAAGGAGAAAGTGGATCAGCTaGGTCTCTGTGAGGAACGCT | + |
|
Preference number: 5 (lower is better) Translates to: CNFKGQSHSKGTSSLTKRRKWIS*VSVRNA Trigger: AGCGTTCCTCACAGAGACCAAGCTGATCCACTTTCT...CCTTTTTGTTAATGAACTAGTTCCCTTTGAGTGTGATTGACCTTTGAAGTTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064230.16 |
||
| CDS CCA 90 bp | CAAAGAATAAATAAAAACTCTCCTCTACTGGCTGGAAAATTAGCCTaGCCACAAGGGAGCCAAGATTATTCACTATGTCATATACACCCT | + |
|
Preference number: 5 (lower is better) Translates to: QRINKNSPLLAGKLA*PQGSQDYSLCHIHP Trigger: AGGGTGTATATGACATAGTGAATAATCTTGGCTCCCTTGTGGCCAGGCTAATTTTCCAGCCAGTAGAGGAGAGTTTTTATTTATTCTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 |
||
| CDS-3UTR CAA 90 bp | CACAATTTTTACACCATGATTTGTTCTTGTTTGGTGTATAACTTCAGGGGCTCCCAAATGCTCTGCTTCTaGAAATACTGGGCAACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HNFYTMICSCLVYNFRGSQMLCF*KYWATV Trigger: AACTGTTGCCCAGTATTTCAAGAAGCAGAGCATTTG...GGAGCCCCTGAAGTTATACACCAAACAAGAACAAATCATGGTGTAAAAATTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS-3UTR CAA 90 bp | CCGGCTGAAAGCCACAATTTTTACACCATGATTTGTTCTTGTTTGGTGTATAACTTCAAGAACGACTGTTaGAAGAAGCTCCAAGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PAESHNFYTMICSCLVYNFKNDC*KKLQAN Trigger: ATTGGCTTGGAGCTTCTTCAAACAGTCGTTCTTGAA...GTTATACACCAAACAAGAACAAATCATGGTGTAAAAATTGTGGCTTTCAGCCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS GCA 72 bp | GCATTCAAGACAAAGGTGATTAATCGAAACAAGACCTaGAGCAGGAGACCCGAGGAGGCCAACCGGGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: AFKTKVINRNKT*SRRPEEANRAA Trigger: GGCGGCCCGGTTGGCCTCCTCGGGTCTCCTGCTGCAGGTCTTGTTTCGATTAATCACCTTTGTCTTGAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS CCA 72 bp | GAACAGCACACCAGTTCCATAGTAGGGGACCACATCTaGATCAGGCACTTCAAGCAACTGCAACCAGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: EQHTSSIVGDHI*IRHFKQLQPDP Trigger: TGGGTCTGGTTGCAGTTGCTTGAAGTGCCTGATCCAGATGTGGTCCCCTACTATGGAACTGGTGTGCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS CAA 90 bp | GTCAGGACACTCCTAAGGATGACCGACATGCTCTCAGCAAGAACCTaGAGCTTAACAAACATATGTGCTTGTGCCAAGACCCAGAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VRTLLRMTDMLSART*SLTNICACAKTQKG Trigger: GCCTTTCTGGGTCTTGGCACAAGCACATATGTTTGTTAAGCTCAAGGTTCTTGCTGAGAGCATGTCGGTCATCCTTAGGAGTGTCCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS GCA 72 bp | GCTCTCAGCAAGAACCTTGAGCTTAACAAACATATGTaGTTGTGCCAAGACCCAGAAAGGCTCTCCCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ALSKNLELNKHM*LCQDPERLSQK Trigger: CTTCTGGGAGAGCCTTTCTGGGTCTTGGCACAAGCACATATGTTTGTTAAGCTCAAGGTTCTTGCTGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
||
| CDS CAA 90 bp | ACGTACCGCTCGCCTTCTGTCAAAATCTGCTTCAAGAACGACTGTTaGAAGAAGCTCCAAGCCAATCCTGCCTCCTTCCAGTTGACAAAT | + |
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Preference number: 6 (lower is better) Translates to: TYRSPSVKICFKNDC*KKLQANPASFQLTN Trigger: ATTTGTCAACTGGAAGGAGGCAGGATTGGCTTGGAGCTTCTTCAAACAGTCGTTCTTGAAGCAGATTTTGACAGAAGGCGAGCGGTACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| CDS GCA 72 bp | AATGTCATCACGTACCGCTCGCCTTCTGTCAAAATCTaGTTCAAGAACGACTGTTTGAAGAAGCTCCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: NVITYRSPSVKI*FKNDCLKKLQA Trigger: GGCTTGGAGCTTCTTCAAACAGTCGTTCTTGAAGCAGATTTTGACAGAAGGCGAGCGGTACGTGATGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| CDS CAA 72 bp | CTCAGCAAGAACCTTGAGCTTAACAAACATATGTGCTaGTGCCAAGACCCAGAAAGGCTCTCCCAGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LSKNLELNKHMC*CQDPERLSQKF Trigger: GAACTTCTGGGAGAGCCTTTCTGGGTCTTGGCACAAGCACATATGTTTGTTAAGCTCAAGGTTCTTGCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| CDS CCA 72 bp | TGCTTCTTGAAATACTGGGCAACAGTTGTGTTACTCTaGAGACAGGAAGAGTTAGTTGCTTGGCTGATTCTG | + |
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Preference number: 6 (lower is better) Translates to: CFLKYWATVVLL*RQEELVAWLIL Trigger: CAGAATCAGCCAAGCAACTAACTCTTCCTGTCTCCAGAGTAACACAACTGTTGCCCAGTATTTCAAGAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| CDS CCA 72 bp | CTGATTCTGGGGAACGCAGTAATTGTATTAAATAGATaGCATAGCAGAGCACCAGAACAGTCGTGTAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: LILGNAVIVLNR*HSRAPEQSCRE Trigger: TTCTCTACACGACTGTTCTGGTGCTCTGCTATGCCATCTATTTAATACAATTACTGCGTTCCCCAGAATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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| CDS CCA 72 bp | GTTGTGTTACTCTGGAGACAGGAAGAGTTAGTTGCTTaGCTGATTCTGGGGAACGCAGTAATTGTATTAAAT | + |
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Preference number: 6 (lower is better) Translates to: VVLLWRQEELVA*LILGNAVIVLN Trigger: ATTTAATACAATTACTGCGTTCCCCAGAATCAGCCAAGCAACTAACTCTTCCTGTCTCCAGAGTAACACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064230.16 ENSMUST00000226817.2 ENSMUST00000228686.2 |
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