Pregenerated sensors for RFLNA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037962Ensembl transcript IDs: ENSMUST00000036109.8, ENSMUST00000197746.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCGTCTTGTGGGGCACATGTGGGCCGCCCTGGAGGGCTGCGCCCTaGACAGCAGACAATGTGTTCTGGGTACCCCCAGCCTTTGCCATC | + |
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Preference number: 1 (lower is better) Translates to: CVLWGTCGPPWRAAP*TADNVFWVPPAFAI Trigger: GATGGCAAAGGCTGGGGGTACCCAGAACACATTGTCTGCTGTGCAGGGCGCAGCCCTCCAGGGCGGCCCACATGTGCCCCACAAGACGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR GCA 90 bp | TCTGGAATGCGTCTTGTGGGGCACATGTGGGCCGCCCTGGAGGGCTaGGCCCTGCACAGCAGACAATGTGTTCTGGGTACCCCCAGCCTT | + |
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Preference number: 1 (lower is better) Translates to: SGMRLVGHMWAALEG*ALHSRQCVLGTPSL Trigger: AAGGCTGGGGGTACCCAGAACACATTGTCTGCTGTGCAGGGCGCAGCCCTCCAGGGCGGCCCACATGTGCCCCACAAGACGCATTCCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CCA 90 bp | GGCACCTGCCAGAGAGCTTTGAGGCTCAAGAGTTCTAAGCTAGTCTaGAATGCGTCTTGTGGGGCACATGTGGGCCGCCCTGGAGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: GTCQRALRLKSSKLV*NASCGAHVGRPGGL Trigger: CAGCCCTCCAGGGCGGCCCACATGTGCCCCACAAGACGCATTCCAGACTAGCTTAGAACTCTTGAGCCTCAAAGCTCTCTGGCAGGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CCA 90 bp | AGCCCTGCCATAGGCTCAAGTCCAGAGTCAGCCATAGGCAGTTATTaGCCGTGTCCCCTCATTTGCTTTGACGCCTCCCAGGGCACCTGC | + |
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Preference number: 1 (lower is better) Translates to: SPAIGSSPESAIGSY*PCPLICFDASQGTC Trigger: GCAGGTGCCCTGGGAGGCGTCAAAGCAAATGAGGGGACACGGCCAATAACTGCCTATGGCTGACTCTGGACTTGAGCCTATGGCAGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR GCA 90 bp | AGTCCAGAGTCAGCCATAGGCAGTTATTGGCCGTGTCCCCTCATTTaGTTTGACGCCTCCCAGGGCACCTGCCAGAGAGCTTTGAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: SPESAIGSYWPCPLI*FDASQGTCQRALRL Trigger: GAGCCTCAAAGCTCTCTGGCAGGTGCCCTGGGAGGCGTCAAAGCAAATGAGGGGACACGGCCAATAACTGCCTATGGCTGACTCTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR TCA 90 bp | AGAGTCAGCCATAGGCAGTTATTGGCCGTGTCCCCTCATTTGCTTTaGCGCCTCCCAGGGCACCTGCCAGAGAGCTTTGAGGCTCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: RVSHRQLLAVSPHLL*RLPGHLPESFEAQE Trigger: CTCTTGAGCCTCAAAGCTCTCTGGCAGGTGCCCTGGGAGGCGTCAAAGCAAATGAGGGGACACGGCCAATAACTGCCTATGGCTGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR GCA 90 bp | GAGGCCAAGAAAAACAGACTCCGCTTCTCTTGGGGTTCTGAGCCCTaGCATAGGCTCAAGTCCAGAGTCAGCCATAGGCAGTTATTGGCC | + |
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Preference number: 1 (lower is better) Translates to: EAKKNRLRFSWGSEP*HRLKSRVSHRQLLA Trigger: GGCCAATAACTGCCTATGGCTGACTCTGGACTTGAGCCTATGGCAGGGCTCAGAACCCCAAGAGAAGCGGAGTCTGTTTTTCTTGGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CCA 90 bp | TTTTGGAAACAAGCCTCTCCAAGAATGAGGTTTCGAGCCAGGCCATaGCTGAGTGCCCTGTGCTACATAGGGCCATCTTTGCCTCAAGGG | + |
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Preference number: 1 (lower is better) Translates to: FWKQASPRMRFRARP*LSALCYIGPSLPQG Trigger: CCCTTGAGGCAAAGATGGCCCTATGTAGCACAGGGCACTCAGCCATGGCCTGGCTCGAAACCTCATTCTTGGAGAGGCTTGTTTCCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CCA 90 bp | AGTCATTTAGGTTCTGTTTGCCCCACAAAGAATGTCCCTTCCCTCTaGGCCACCACAGCGGCAGTAGGTAGGTTTCTAGCTACTGGACAA | + |
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Preference number: 1 (lower is better) Translates to: SHLGSVCPTKNVPSL*ATTAAVGRFLATGQ Trigger: TTGTCCAGTAGCTAGAAACCTACCTACTGCCGCTGTGGTGGCCCAGAGGGAAGGGACATTCTTTGTGGGGCAAACAGAACCTAAATGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR GCA 90 bp | AAGCTAATAGATGAACAGAAATCTATCAGTCATTTAGGTTCTGTTTaGCCCACAAAGAATGTCCCTTCCCTCTGGGCCACCACAGCGGCA | + |
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Preference number: 1 (lower is better) Translates to: KLIDEQKSISHLGSV*PTKNVPSLWATTAA Trigger: TGCCGCTGTGGTGGCCCAGAGGGAAGGGACATTCTTTGTGGGGCAAACAGAACCTAAATGACTGATAGATTTCTGTTCATCTATTAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR-3UTR GCA 90 bp | GACTCGGGGACTCATTTTAGCCTGGGCACCATGGGACAGCACCAGGTTGTGGGAGCCGCCCTGGAGGGCTaGGCCCTGCACAGCAGACAA | + |
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Preference number: 2 (lower is better) Translates to: DSGTHFSLGTMGQHQVVGAALEG*ALHSRQ Trigger: TTGTCTGCTGTGCAGGGCGCAGCCCTCCAGGGCGGC...TCCCACAACCTGGTGCTGTCCCATGGTGCCCAGGCTAAAATGAGTCCCCGAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTTCTGTTTGCCCCACAAAGAATGTCCCTTCCCTCTGGGCCACCACAGCGGCCTTGTGGGGCACATGTaGGCCGCCCTGGAGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: RFCLPHKECPFPLGHHSGLVGHM*AALEGC Trigger: GCAGCCCTCCAGGGCGGCCCACATGTGCCCCACAAG...GCCGCTGTGGTGGCCCAGAGGGAAGGGACATTCTTTGTGGGGCAAACAGAACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTTCTGTTTGCCCCACAAAGAATGTCCCTTCCCTCTGGGCCACCACAGCGGCTCCCCTCATTTGCTTTaGCGCCTCCCAGGGCACCTG | + |
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Preference number: 2 (lower is better) Translates to: RFCLPHKECPFPLGHHSGSPHLL*RLPGHL Trigger: CAGGTGCCCTGGGAGGCGTCAAAGCAAATGAGGGGA...GCCGCTGTGGTGGCCCAGAGGGAAGGGACATTCTTTGTGGGGCAAACAGAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR-3UTR GCA 90 bp | GACGCCTCCCAGGGCACCTGCCAGAGAGCTTTGAGGCTCAAGAGTTCTAAGCTACAGGCCATGGCTGAGTaGCCTGTGCTACATAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: DASQGTCQRALRLKSSKLQAMAE*PVLHRA Trigger: GGCCCTATGTAGCACAGGGCACTCAGCCATGGCCTG...TAGCTTAGAACTCTTGAGCCTCAAAGCTCTCTGGCAGGTGCCCTGGGAGGCGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTGCCCCACAAAGAATGTCCCTTCCCTCTGGGCCACCACAGCGGCAGTAGGTTTTCGAGCCAGGCCATaGCTGAGTGCCCTGTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: VCPTKNVPSLWATTAAVGFRARP*LSALCY Trigger: GTAGCACAGGGCACTCAGCCATGGCCTGGCTCGAAA...ACCTACTGCCGCTGTGGTGGCCCAGAGGGAAGGGACATTCTTTGTGGGGCAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCCAGAGTCAGCCATAGGCAGTTATTGGCCGTGTCCCCTCATTTGCTTTGACACATGTGGGCCGCCCTaGAGGGCTGCGCCCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: SPESAIGSYWPCPLICFDTCGPP*RAAPCT Trigger: TGTGCAGGGCGCAGCCCTCCAGGGCGGCCCACATGT...GTCAAAGCAAATGAGGGGACACGGCCAATAACTGCCTATGGCTGACTCTGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTCTGTTTGCCCCACAAAGAATGTCCCTTCCCTCTGGGCCACCACAGCGGCATTAGCCTGGGCACCATaGGACAGCACCAGGTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: GSVCPTKNVPSLWATTAALAWAP*DSTRLW Trigger: CCACAACCTGGTGCTGTCCCATGGTGCCCAGGCTAA...TGCCGCTGTGGTGGCCCAGAGGGAAGGGACATTCTTTGTGGGGCAAACAGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CAA 90 bp | CTGCGCCCTGCACAGCAGACAATGTGTTCTGGGTACCCCCAGCCTTaGCCATCTCAGGTCAAGGTAAAGTTAGCTCAACCCCTCCGCACG | + |
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Preference number: 2 (lower is better) Translates to: LRPAQQTMCSGYPQP*PSQVKVKLAQPLRT Trigger: CGTGCGGAGGGGTTGAGCTAACTTTACCTTGACCTGAGATGGCAAAGGCTGGGGGTACCCAGAACACATTGTCTGCTGTGCAGGGCGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR-3UTR GCA 90 bp | GGACAATTGAGACAAAGGGACATCTCCACCTCTAAAGTAGACTCGGGGACTCATGCCGCCCTGGAGGGCTaGGCCCTGCACAGCAGACAA | + |
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Preference number: 2 (lower is better) Translates to: GQLRQRDISTSKVDSGTHAALEG*ALHSRQ Trigger: TTGTCTGCTGTGCAGGGCGCAGCCCTCCAGGGCGGC...ATGAGTCCCCGAGTCTACTTTAGAGGTGGAGATGTCCCTTTGTCTCAATTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAATTGAGACAAAGGGACATCTCCACCTCTAAAGTAGACTCGGGGACTCATACATGTGGGCCGCCCTaGAGGGCTGCGCCCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: GQLRQRDISTSKVDSGTHTCGPP*RAAPCT Trigger: TGTGCAGGGCGCAGCCCTCCAGGGCGGCCCACATGT...ATGAGTCCCCGAGTCTACTTTAGAGGTGGAGATGTCCCTTTGTCTCAATTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CAA 90 bp | CCCCTCATTTGCTTTGACGCCTCCCAGGGCACCTGCCAGAGAGCTTaGAGGCTCAAGAGTTCTAAGCTAGTCTGGAATGCGTCTTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: PLICFDASQGTCQRA*RLKSSKLVWNASCG Trigger: CCCACAAGACGCATTCCAGACTAGCTTAGAACTCTTGAGCCTCAAAGCTCTCTGGCAGGTGCCCTGGGAGGCGTCAAAGCAAATGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR-3UTR GCA 90 bp | GTAACTGTAGGATCCATCCTAAGCAAGAACGGGAGGCCAAGAAAAACAGACTCCCAGGCCATGGCTGAGTaGCCTGTGCTACATAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: VTVGSILSKNGRPRKTDSQAMAE*PVLHRA Trigger: GGCCCTATGTAGCACAGGGCACTCAGCCATGGCCTG...GGAGTCTGTTTTTCTTGGCCTCCCGTTCTTGCTTAGGATGGATCCTACAGTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CAA 90 bp | TGGGCCACCACAGCGGCAGTAGGTAGGTTTCTAGCTACTGGACAATaGAGACAAAGGGACATCTCCACCTCTAAAGTAGACTCGGGGACT | + |
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Preference number: 2 (lower is better) Translates to: WATTAAVGRFLATGQ*RQRDISTSKVDSGT Trigger: AGTCCCCGAGTCTACTTTAGAGGTGGAGATGTCCCTTTGTCTCAATTGTCCAGTAGCTAGAAACCTACCTACTGCCGCTGTGGTGGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR-3UTR CCA 90 bp | GACGCCTCCCAGGGCACCTGCCAGAGAGCTTTGAGGCTCAAGAGTTCTAAGCTATTTAATGGCCTATTTTaGAAACAAGCCTCTCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: DASQGTCQRALRLKSSKLFNGLF*KQASPR Trigger: TCTTGGAGAGGCTTGTTTCCAAAATAGGCCATTAAA...TAGCTTAGAACTCTTGAGCCTCAAAGCTCTCTGGCAGGTGCCCTGGGAGGCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCCAGAGTCAGCCATAGGCAGTTATTGGCCGTGTCCCCTCATTTGCTTTGACTTTAATGGCCTATTTTaGAAACAAGCCTCTCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: SPESAIGSYWPCPLICFDFNGLF*KQASPR Trigger: TCTTGGAGAGGCTTGTTTCCAAAATAGGCCATTAAA...GTCAAAGCAAATGAGGGGACACGGCCAATAACTGCCTATGGCTGACTCTGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR GCA 72 bp | TGGGGCACATGTGGGCCGCCCTGGAGGGCTGCGCCCTaGACAGCAGACAATGTGTTCTGGGTACCCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: WGTCGPPWRAAP*TADNVFWVPPA Trigger: GGCTGGGGGTACCCAGAACACATTGTCTGCTGTGCAGGGCGCAGCCCTCCAGGGCGGCCCACATGTGCCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR GCA 72 bp | CGTCTTGTGGGGCACATGTGGGCCGCCCTGGAGGGCTaGGCCCTGCACAGCAGACAATGTGTTCTGGGTACC | + |
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Preference number: 3 (lower is better) Translates to: RLVGHMWAALEG*ALHSRQCVLGT Trigger: GGTACCCAGAACACATTGTCTGCTGTGCAGGGCGCAGCCCTCCAGGGCGGCCCACATGTGCCCCACAAGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR GCA 72 bp | ATGAGGTTTCGAGCCAGGCCATGGCTGAGTGCCCTGTaGTACATAGGGCCATCTTTGCCTCAAGGGCACACC | + |
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Preference number: 3 (lower is better) Translates to: MRFRARPWLSAL*YIGPSLPQGHT Trigger: GGTGTGCCCTTGAGGCAAAGATGGCCCTATGTAGCACAGGGCACTCAGCCATGGCCTGGCTCGAAACCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR TCA 72 bp | CATAGGCAGTTATTGGCCGTGTCCCCTCATTTGCTTTaGCGCCTCCCAGGGCACCTGCCAGAGAGCTTTGAG | + |
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Preference number: 3 (lower is better) Translates to: HRQLLAVSPHLL*RLPGHLPESFE Trigger: CTCAAAGCTCTCTGGCAGGTGCCCTGGGAGGCGTCAAAGCAAATGAGGGGACACGGCCAATAACTGCCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTGCCCCACAAAGAATGTCCCTTCCCTCTGGGCCACCACAGCGGCAGTAGGTACCTGCCAGAGAGCTTaGAGGCTCAAGAGTTCTAAG | + |
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Preference number: 3 (lower is better) Translates to: VCPTKNVPSLWATTAAVGTCQRA*RLKSSK Trigger: CTTAGAACTCTTGAGCCTCAAAGCTCTCTGGCAGGT...ACCTACTGCCGCTGTGGTGGCCCAGAGGGAAGGGACATTCTTTGTGGGGCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CCA 72 bp | CAAGCCTCTCCAAGAATGAGGTTTCGAGCCAGGCCATaGCTGAGTGCCCTGTGCTACATAGGGCCATCTTTG | + |
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Preference number: 3 (lower is better) Translates to: QASPRMRFRARP*LSALCYIGPSL Trigger: CAAAGATGGCCCTATGTAGCACAGGGCACTCAGCCATGGCCTGGCTCGAAACCTCATTCTTGGAGAGGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CCA 72 bp | CAGAGAGCTTTGAGGCTCAAGAGTTCTAAGCTAGTCTaGAATGCGTCTTGTGGGGCACATGTGGGCCGCCCT | + |
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Preference number: 3 (lower is better) Translates to: QRALRLKSSKLV*NASCGAHVGRP Trigger: AGGGCGGCCCACATGTGCCCCACAAGACGCATTCCAGACTAGCTTAGAACTCTTGAGCCTCAAAGCTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CCA 72 bp | GAACGGGAGGCCAAGAAAAACAGACTCCGCTTCTCTTaGGGTTCTGAGCCCTGCCATAGGCTCAAGTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: EREAKKNRLRFS*GSEPCHRLKSR Trigger: TCTGGACTTGAGCCTATGGCAGGGCTCAGAACCCCAAGAGAAGCGGAGTCTGTTTTTCTTGGCCTCCCGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CCA 72 bp | GGTTCTGTTTGCCCCACAAAGAATGTCCCTTCCCTCTaGGCCACCACAGCGGCAGTAGGTAGGTTTCTAGCT | + |
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Preference number: 3 (lower is better) Translates to: GSVCPTKNVPSL*ATTAAVGRFLA Trigger: AGCTAGAAACCTACCTACTGCCGCTGTGGTGGCCCAGAGGGAAGGGACATTCTTTGTGGGGCAAACAGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR GCA 72 bp | TGTCCCCTCATTTGCTTTGACGCCTCCCAGGGCACCTaGCAGAGAGCTTTGAGGCTCAAGAGTTCTAAGCTA | + |
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Preference number: 3 (lower is better) Translates to: CPLICFDASQGT*QRALRLKSSKL Trigger: TAGCTTAGAACTCTTGAGCCTCAAAGCTCTCTGGCAGGTGCCCTGGGAGGCGTCAAAGCAAATGAGGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR GCA 72 bp | AAAAACAGACTCCGCTTCTCTTGGGGTTCTGAGCCCTaGCATAGGCTCAAGTCCAGAGTCAGCCATAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: KNRLRFSWGSEP*HRLKSRVSHRQ Trigger: CTGCCTATGGCTGACTCTGGACTTGAGCCTATGGCAGGGCTCAGAACCCCAAGAGAAGCGGAGTCTGTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CCA 72 bp | ATAGGCTCAAGTCCAGAGTCAGCCATAGGCAGTTATTaGCCGTGTCCCCTCATTTGCTTTGACGCCTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: IGSSPESAIGSY*PCPLICFDASQ Trigger: CTGGGAGGCGTCAAAGCAAATGAGGGGACACGGCCAATAACTGCCTATGGCTGACTCTGGACTTGAGCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CCA 72 bp | CTGGGCACCATGGGACAGCACCAGGTTGTGGGAAACTaGTGTAACTGTAGGATCCATCCTAAGCAAGAACGG | + |
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Preference number: 3 (lower is better) Translates to: LGTMGQHQVVGN*CNCRIHPKQER Trigger: CCGTTCTTGCTTAGGATGGATCCTACAGTTACACCAGTTTCCCACAACCTGGTGCTGTCCCATGGTGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGCTTTGAGGCTCAAGAGTTCTAAGCTAGTCTGGAATGCGTCTTGTGGGGCAGGGTACCCCCAGCCTTaGCCATCTCAGGTCAAGGTA | + |
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Preference number: 3 (lower is better) Translates to: RALRLKSSKLVWNASCGAGYPQP*PSQVKV Trigger: TACCTTGACCTGAGATGGCAAAGGCTGGGGGTACCC...TGCCCCACAAGACGCATTCCAGACTAGCTTAGAACTCTTGAGCCTCAAAGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CCA 72 bp | ATTTTAGCCTGGGCACCATGGGACAGCACCAGGTTGTaGGAAACTGGTGTAACTGTAGGATCCATCCTAAGC | + |
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Preference number: 3 (lower is better) Translates to: ILAWAPWDSTRL*ETGVTVGSILS Trigger: GCTTAGGATGGATCCTACAGTTACACCAGTTTCCCACAACCTGGTGCTGTCCCATGGTGCCCAGGCTAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR CCA 90 bp | CGCCCTGGAGGGCTGCGCCCTGCACAGCAGACAATGTGTTCTGGGTACCCCCAGGAACCGCAGGGCCCGTaGGCGAGGCTCCAGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: RPGGLRPAQQTMCSGYPQEPQGP*ARLQGQ Trigger: CTGACCCTGGAGCCTCGCCCACGGGCCCTGCGGTTC...CTGGGGGTACCCAGAACACATTGTCTGCTGTGCAGGGCGCAGCCCTCCAGGGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR CCA 90 bp | GGAGGGCTGCGCCCTGCACAGCAGACAATGTGTTCTGGGTACCCCCAGCCTTTGGAACCGCAGGGCCCGTaGGCGAGGCTCCAGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GGLRPAQQTMCSGYPQPLEPQGP*ARLQGQ Trigger: CTGACCCTGGAGCCTCGCCCACGGGCCCTGCGGTTC...CAAAGGCTGGGGGTACCCAGAACACATTGTCTGCTGTGCAGGGCGCAGCCCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR CCA 90 bp | GGAGGGCTGCGCCCTGCACAGCAGACAATGTGTTCTGGGTACCCCCAGCCTTTGGGCTGCAGTGCAGGGTaGTGCGGAAGGAGCTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GGLRPAQQTMCSGYPQPLGCSAG*CGRSCG Trigger: CCCGCAGCTCCTTCCGCACCACCCTGCACTGCAGCC...CAAAGGCTGGGGGTACCCAGAACACATTGTCTGCTGTGCAGGGCGCAGCCCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR GCA 90 bp | GCCTCTCCAAGAATGAGGTTTCGAGCCAGGCCATGGCTGAGTGCCCTGTGCTACCCAGGGTCAGCTGGCTaGGGTAGCTCCGCCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: ASPRMRFRARPWLSALCYPGSAG*GSSARC Trigger: GCACCTGGCGGAGCTACCGCAGCCAGCTGACCCTGG...GTAGCACAGGGCACTCAGCCATGGCCTGGCTCGAAACCTCATTCTTGGAGAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR GCA 90 bp | CCCCTCATTTGCTTTGACGCCTCCCAGGGCACCTGCCAGAGAGCTTTGAGGCTCCTGGAGGAGTACCAGTaGCGAGGCTGGCCGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PLICFDASQGTCQRALRLLEEYQ*RGWPRL Trigger: CAGCCTCGGCCAGCCTCGGCACTGGTACTCCTCCAG...GAGCCTCAAAGCTCTCTGGCAGGTGCCCTGGGAGGCGTCAAAGCAAATGAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR CCA 90 bp | GCCTCTCCAAGAATGAGGTTTCGAGCCAGGCCATGGCTGAGTGCCCTGTGCTACGCCGCAGCTGCAGGCTaGAGGAGTACCAGTGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASPRMRFRARPWLSALCYAAAAG*RSTSAE Trigger: CTCGGCACTGGTACTCCTCCAGCCTGCAGCTGCGGC...GTAGCACAGGGCACTCAGCCATGGCCTGGCTCGAAACCTCATTCTTGGAGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR CCA 90 bp | GGTTCTGTTTGCCCCACAAAGAATGTCCCTTCCCTCTGGGCCACCACAGCGGCAGCCGCAGCTGCAGGCTaGAGGAGTACCAGTGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSVCPTKNVPSLWATTAAAAAAG*RSTSAE Trigger: CTCGGCACTGGTACTCCTCCAGCCTGCAGCTGCGGC...TGCCGCTGTGGTGGCCCAGAGGGAAGGGACATTCTTTGTGGGGCAAACAGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR GCA 90 bp | CTAACCTGTGGTGGTAGCCGGGCCATCTTTCCTGAACCTCTCCCACACTCAGGTGGTAGCTCCGCCAGGTaGAGTTGGGCGCCGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: LTCGGSRAIFPEPLPHSGGSSAR*SWAPPL Trigger: TAGTGGCGGCGCCCAACTGCACCTGGCGGAGCTACC...ACCTGAGTGTGGGAGAGGTTCAGGAAAGATGGCCCGGCTACCACCACAGGTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR GCA 90 bp | CTAACCTGTGGTGGTAGCCGGGCCATCTTTCCTGAACCTCTCCCACACTCAGGTCTGGAGGAGTACCAGTaGCGAGGCTGGCCGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTCGGSRAIFPEPLPHSGLEEYQ*RGWPRL Trigger: CAGCCTCGGCCAGCCTCGGCACTGGTACTCCTCCAG...ACCTGAGTGTGGGAGAGGTTCAGGAAAGATGGCCCGGCTACCACCACAGGTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR GCA 90 bp | AGGTTCTGTTTGCCCCACAAAGAATGTCCCTTCCCTCTGGGCCACCACAGCGGCTGGTGCGGAAGGAGCTaGGGGCCAGTTTGGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RFCLPHKECPFPLGHHSGWCGRS*GPVWGR Trigger: TCTTCCCCAAACTGGCCCGCAGCTCCTTCCGCACCA...GCCGCTGTGGTGGCCCAGAGGGAAGGGACATTCTTTGTGGGGCAAACAGAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR CCA 90 bp | CCCCTCATTTGCTTTGACGCCTCCCAGGGCACCTGCCAGAGAGCTTTGAGGCTCAGAGCTGGGGGAGTTTaGAAGAGGGAAGGAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLICFDASQGTCQRALRLRAGGV*KREGAA Trigger: AGCGGCTCCTTCCCTCTTCCAAACTCCCCCAGCTCT...GAGCCTCAAAGCTCTCTGGCAGGTGCCCTGGGAGGCGTCAAAGCAAATGAGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR GCA 90 bp | CCCCTCATTTGCTTTGACGCCTCCCAGGGCACCTGCCAGAGAGCTTTGAGGCTCCTGGGTCCACCTCGATaGTCTCCCCAAAGAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: PLICFDASQGTCQRALRLLGPPR*SPQRTQ Trigger: CTGTGTTCTTTGGGGAGAGCATCGAGGTGGACCCAG...GAGCCTCAAAGCTCTCTGGCAGGTGCCCTGGGAGGCGTCAAAGCAAATGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR GCA 90 bp | AGTCCAGAGTCAGCCATAGGCAGTTATTGGCCGTGTCCCCTCATTTGCTTTGACCCAGGGTCAGCTGGCTaGGGTAGCTCCGCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPESAIGSYWPCPLICFDPGSAG*GSSARC Trigger: GCACCTGGCGGAGCTACCGCAGCCAGCTGACCCTGG...GTCAAAGCAAATGAGGGGACACGGCCAATAACTGCCTATGGCTGACTCTGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR GCA 90 bp | GACGCCTCCCAGGGCACCTGCCAGAGAGCTTTGAGGCTCAAGAGTTCTAAGCTATGGTGCGGAAGGAGCTaGGGGCCAGTTTGGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DASQGTCQRALRLKSSKLWCGRS*GPVWGR Trigger: TCTTCCCCAAACTGGCCCGCAGCTCCTTCCGCACCA...TAGCTTAGAACTCTTGAGCCTCAAAGCTCTCTGGCAGGTGCCCTGGGAGGCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR GCA 90 bp | CAGACAATGTGTTCTGGGTACCCCCAGCCTTTGCCATCTCAGGTCAAGGTAAAGGAGGCTGGCCGAGGCTaGAGTGCAGGGTGGTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTMCSGYPQPLPSQVKVKEAGRG*SAGWCG Trigger: TCCGCACCACCCTGCACTGCAGCCTCGGCCAGCCTC...CTTTACCTTGACCTGAGATGGCAAAGGCTGGGGGTACCCAGAACACATTGTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR GCA 90 bp | TCATTTAGGTTCTGTTTGCCCCACAAAGAATGTCCCTTCCCTCTGGGCCACCACGAGGCTGGCCGAGGCTaGAGTGCAGGGTGGTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFRFCLPHKECPFPLGHHEAGRG*SAGWCG Trigger: TCCGCACCACCCTGCACTGCAGCCTCGGCCAGCCTC...GTGGTGGCCCAGAGGGAAGGGACATTCTTTGTGGGGCAAACAGAACCTAAATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR CCA 90 bp | GACTCGGGGACTCATTTTAGCCTGGGCACCATGGGACAGCACCAGGTTGTGGGAAGAGCTGGGGGAGTTTaGAAGAGGGAAGGAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSGTHFSLGTMGQHQVVGRAGGV*KREGAA Trigger: AGCGGCTCCTTCCCTCTTCCAAACTCCCCCAGCTCT...TCCCACAACCTGGTGCTGTCCCATGGTGCCCAGGCTAAAATGAGTCCCCGAGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR GCA 90 bp | AGTCCAGAGTCAGCCATAGGCAGTTATTGGCCGTGTCCCCTCATTTGCTTTGACGGTAGCTCCGCCAGGTaGAGTTGGGCGCCGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SPESAIGSYWPCPLICFDGSSAR*SWAPPL Trigger: TAGTGGCGGCGCCCAACTGCACCTGGCGGAGCTACC...GTCAAAGCAAATGAGGGGACACGGCCAATAACTGCCTATGGCTGACTCTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
||
| CDS-3UTR GCA 90 bp | TCATTTAGGTTCTGTTTGCCCCACAAAGAATGTCCCTTCCCTCTGGGCCACCACTGGCCGAGGCTGCAGTaGAGGGTGGTGCGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFRFCLPHKECPFPLGHHWPRLQ*RVVRKE Trigger: CTCCTTCCGCACCACCCTGCACTGCAGCCTCGGCCA...GTGGTGGCCCAGAGGGAAGGGACATTCTTTGTGGGGCAAACAGAACCTAAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR GCA 90 bp | GGACAATTGAGACAAAGGGACATCTCCACCTCTAAAGTAGACTCGGGGACTCATTGGCCGAGGCTGCAGTaGAGGGTGGTGCGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQLRQRDISTSKVDSGTHWPRLQ*RVVRKE Trigger: CTCCTTCCGCACCACCCTGCACTGCAGCCTCGGCCA...ATGAGTCCCCGAGTCTACTTTAGAGGTGGAGATGTCCCTTTGTCTCAATTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CAA 72 bp | TGCTTTGACGCCTCCCAGGGCACCTGCCAGAGAGCTTaGAGGCTCAAGAGTTCTAAGCTAGTCTGGAATGCG | + |
|
Preference number: 4 (lower is better) Translates to: CFDASQGTCQRA*RLKSSKLVWNA Trigger: CGCATTCCAGACTAGCTTAGAACTCTTGAGCCTCAAAGCTCTCTGGCAGGTGCCCTGGGAGGCGTCAAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR GCA 90 bp | GACAATGTGTTCTGGGTACCCCCAGCCTTTGCCATCTCAGGTCAAGGTAAAGTTGCAGCGGATTTCATGTaGGGGTTCTGGGTCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: DNVFWVPPAFAISGQGKVAADFM*GFWVHL Trigger: GAGGTGGACCCAGAACCCGCACATGAAATCCGCTGC...AACTTTACCTTGACCTGAGATGGCAAAGGCTGGGGGTACCCAGAACACATTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
||
| 3UTR CAA 72 bp | GCACAGCAGACAATGTGTTCTGGGTACCCCCAGCCTTaGCCATCTCAGGTCAAGGTAAAGTTAGCTCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: AQQTMCSGYPQP*PSQVKVKLAQP Trigger: GGGTTGAGCTAACTTTACCTTGACCTGAGATGGCAAAGGCTGGGGGTACCCAGAACACATTGTCTGCTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR GCA 90 bp | GTAACTGTAGGATCCATCCTAAGCAAGAACGGGAGGCCAAGAAAAACAGACTCCGCAGCGGATTTCATGTaGGGGTTCTGGGTCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTVGSILSKNGRPRKTDSAADFM*GFWVHL Trigger: GAGGTGGACCCAGAACCCGCACATGAAATCCGCTGC...GGAGTCTGTTTTTCTTGGCCTCCCGTTCTTGCTTAGGATGGATCCTACAGTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| 3UTR CAA 72 bp | CTCATTTTAGCCTGGGCACCATGGGACAGCACCAGGTaGTGGGAAACTGGTGTAACTGTAGGATCCATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LILAWAPWDSTR*WETGVTVGSIL Trigger: TAGGATGGATCCTACAGTTACACCAGTTTCCCACAACCTGGTGCTGTCCCATGGTGCCCAGGCTAAAATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS GCA 90 bp | TCCCGAACCGCAGGGCCCGTGGGCGAGGCTCCAGGGTCAGCTGGCTaGGGTAGCTCCGCCAGGTGCAGTTGGGCGCCGCCACTATGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRTAGPVGEAPGSAG*GSSARCSWAPPLWS Trigger: AGACCATAGTGGCGGCGCCCAACTGCACCTGGCGGAGCTACCGCAGCCAGCTGACCCTGGAGCCTCGCCCACGGGCCCTGCGGTTCGGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS GCA 90 bp | GTAGGGTCCCCGCACCGCCGCAGCTGCAGGCTGGAGGAGTACCAGTaGCGAGGCTGGCCGAGGCTGCAGTGCAGGGTGGTGCGGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VGSPHRRSCRLEEYQ*RGWPRLQCRVVRKE Trigger: CTCCTTCCGCACCACCCTGCACTGCAGCCTCGGCCAGCCTCGGCACTGGTACTCCTCCAGCCTGCAGCTGCGGCGGTGCGGGGACCCTAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS TCA 90 bp | AGTGCAGGGTGGTGCGGAAGGAGCTGCGGGCCAGTTTGGGGAAGATaGTGGCGGTGCTCCCGAACCGCAGGGCCCGTGGGCGAGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SAGWCGRSCGPVWGR*WRCSRTAGPVGEAP Trigger: TGGAGCCTCGCCCACGGGCCCTGCGGTTCGGGAGCACCGCCATCATCTTCCCCAAACTGGCCCGCAGCTCCTTCCGCACCACCCTGCACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS GCA 90 bp | GCAGCTGCAGGCTGGAGGAGTACCAGTGCCGAGGCTGGCCGAGGCTaGAGTGCAGGGTGGTGCGGAAGGAGCTGCGGGCCAGTTTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AAAGWRSTSAEAGRG*SAGWCGRSCGPVWG Trigger: TCCCCAAACTGGCCCGCAGCTCCTTCCGCACCACCCTGCACTGCAGCCTCGGCCAGCCTCGGCACTGGTACTCCTCCAGCCTGCAGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS CCA 90 bp | CAGTTTGGGGAAGATGATGGCGGTGCTCCCGAACCGCAGGGCCCGTaGGCGAGGCTCCAGGGTCAGCTGGCTGCGGTAGCTCCGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QFGEDDGGAPEPQGP*ARLQGQLAAVAPPG Trigger: ACCTGGCGGAGCTACCGCAGCCAGCTGACCCTGGAGCCTCGCCCACGGGCCCTGCGGTTCGGGAGCACCGCCATCATCTTCCCCAAACTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS CCA 90 bp | GAGCTGGGGGAGTTTGGAAGAGGGAAGGAGCCGCTGGAGCTTCAGTaGTGGTCCGGGTGTCCAGGGTGCCTGGCGACAGGGCGTAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ELGEFGRGKEPLELQ*WSGCPGCLATGRRR Trigger: CCTTCTACGCCCTGTCGCCAGGCACCCTGGACACCCGGACCACCACTGAAGCTCCAGCGGCTCCTTCCCTCTTCCAAACTCCCCCAGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR CAA 90 bp | GGAGGGCTGCGCCCTGCACAGCAGACAATGTGTTCTGGGTACCCCCAGCCTTTGCAGAGCTGGGGGAGTTaGGAAGAGGGAAGGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GGLRPAQQTMCSGYPQPLQSWGS*EEGRSR Trigger: GCGGCTCCTTCCCTCTTCCAAACTCCCCCAGCTCTG...CAAAGGCTGGGGGTACCCAGAACACATTGTCTGCTGTGCAGGGCGCAGCCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS TCA 90 bp | GCCAGGTGCAGTTGGGCGCCGCCACTATGGTCTCACTGTAGGCCGTaGCCGTGGGCACTGGAGCGTAGAAGATCTTGTCTCGGAAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: ARCSWAPPLWSHCRP*PWALERRRSCLGSI Trigger: GATACTTCCGAGACAAGATCTTCTACGCTCCAGTGCCCACGGTCACGGCCTACAGTGAGACCATAGTGGCGGCGCCCAACTGCACCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS TCA 90 bp | TGGGTCCACCTCGATGCTCTCCCCAAAGAACACAGGCAGCAACCGTaGCCTCATCTCCAGAGCTGGGGGAGTTTGGAAGAGGGAAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WVHLDALPKEHRQQP*PHLQSWGSLEEGRS Trigger: GCTCCTTCCCTCTTCCAAACTCCCCCAGCTCTGGAGATGAGGTCACGGTTGCTGCCTGTGTTCTTTGGGGAGAGCATCGAGGTGGACCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS CCA 90 bp | GGCGTAGGTGATCTCAGAGTTGCAGCGGATTTCATGTGCGGGTTCTaGGTCCACCTCGATGCTCTCCCCAAAGAACACAGGCAGCAACCG | + |
|
Preference number: 5 (lower is better) Translates to: GVGDLRVAADFMCGF*VHLDALPKEHRQQP Trigger: CGGTTGCTGCCTGTGTTCTTTGGGGAGAGCATCGAGGTGGACCCAGAACCCGCACATGAAATCCGCTGCAACTCTGAGATCACCTACGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS-3UTR CAA 90 bp | TTTAGCCTGGGCACCATGGGACAGCACCAGGTTGTGGGAAACTGGTGTAACTGTCAGAGCTGGGGGAGTTaGGAAGAGGGAAGGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FSLGTMGQHQVVGNWCNCQSWGS*EEGRSR Trigger: GCGGCTCCTTCCCTCTTCCAAACTCCCCCAGCTCTG...ACAGTTACACCAGTTTCCCACAACCTGGTGCTGTCCCATGGTGCCCAGGCTAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS GCA 90 bp | CAGAGTTGCAGCGGATTTCATGTGCGGGTTCTGGGTCCACCTCGATaGTCTCCCCAAAGAACACAGGCAGCAACCGTGACCTCATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QSCSGFHVRVLGPPR*SPQRTQAATVTSSP Trigger: TGGAGATGAGGTCACGGTTGCTGCCTGTGTTCTTTGGGGAGAGCATCGAGGTGGACCCAGAACCCGCACATGAAATCCGCTGCAACTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS TCA 90 bp | CGTGGGCACTGGAGCGTAGAAGATCTTGTCTCGGAAGTATCTCTCTaGGGCGTAGGTGATCTCAGAGTTGCAGCGGATTTCATGTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGHWSVEDLVSEVSL*GVGDLRVAADFMCG Trigger: CCCGCACATGAAATCCGCTGCAACTCTGAGATCACCTACGCCTCAGAGAGATACTTCCGAGACAAGATCTTCTACGCTCCAGTGCCCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS TCA 90 bp | GAGCGTAGAAGATCTTGTCTCGGAAGTATCTCTCTGAGGCGTAGGTaGTCTCAGAGTTGCAGCGGATTTCATGTGCGGGTTCTGGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ERRRSCLGSISLRRR*SQSCSGFHVRVLGP Trigger: TGGACCCAGAACCCGCACATGAAATCCGCTGCAACTCTGAGATCACCTACGCCTCAGAGAGATACTTCCGAGACAAGATCTTCTACGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS GCA 72 bp | GCAGGGCCCGTGGGCGAGGCTCCAGGGTCAGCTGGCTaGGGTAGCTCCGCCAGGTGCAGTTGGGCGCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGPVGEAPGSAG*GSSARCSWAPP Trigger: TGGCGGCGCCCAACTGCACCTGGCGGAGCTACCGCAGCCAGCTGACCCTGGAGCCTCGCCCACGGGCCCTGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS GCA 72 bp | GGCTGGAGGAGTACCAGTGCCGAGGCTGGCCGAGGCTaGAGTGCAGGGTGGTGCGGAAGGAGCTGCGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GWRSTSAEAGRG*SAGWCGRSCGP Trigger: TGGCCCGCAGCTCCTTCCGCACCACCCTGCACTGCAGCCTCGGCCAGCCTCGGCACTGGTACTCCTCCAGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS TCA 72 bp | TGGTGCGGAAGGAGCTGCGGGCCAGTTTGGGGAAGATaGTGGCGGTGCTCCCGAACCGCAGGGCCCGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WCGRSCGPVWGR*WRCSRTAGPVG Trigger: GCCCACGGGCCCTGCGGTTCGGGAGCACCGCCATCATCTTCCCCAAACTGGCCCGCAGCTCCTTCCGCACCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS CCA 72 bp | GAAGATGATGGCGGTGCTCCCGAACCGCAGGGCCCGTaGGCGAGGCTCCAGGGTCAGCTGGCTGCGGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: EDDGGAPEPQGP*ARLQGQLAAVA Trigger: AGCTACCGCAGCCAGCTGACCCTGGAGCCTCGCCCACGGGCCCTGCGGTTCGGGAGCACCGCCATCATCTTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
||
| CDS CCA 72 bp | CGCAGCTGCAGGCTGGAGGAGTACCAGTGCCGAGGCTaGCCGAGGCTGCAGTGCAGGGTGGTGCGGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RSCRLEEYQCRG*PRLQCRVVRKE Trigger: CTCCTTCCGCACCACCCTGCACTGCAGCCTCGGCCAGCCTCGGCACTGGTACTCCTCCAGCCTGCAGCTGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
||
| CDS CCA 72 bp | TGGAGCTTCAGTGGTGGTCCGGGTGTCCAGGGTGCCTaGCGACAGGGCGTAGAAGGGCGGGCTAGGACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: WSFSGGPGVQGA*RQGVEGRARTG Trigger: CCCAGTCCTAGCCCGCCCTTCTACGCCCTGTCGCCAGGCACCCTGGACACCCGGACCACCACTGAAGCTCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
||
| CDS GCA 72 bp | GCTCCAGGGTCAGCTGGCTGCGGTAGCTCCGCCAGGTaGAGTTGGGCGCCGCCACTATGGTCTCACTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: APGSAGCGSSAR*SWAPPLWSHCR Trigger: CCTACAGTGAGACCATAGTGGCGGCGCCCAACTGCACCTGGCGGAGCTACCGCAGCCAGCTGACCCTGGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
||
| CDS CAA 72 bp | CAGTGCAGGGTGGTGCGGAAGGAGCTGCGGGCCAGTTaGGGGAAGATGATGGCGGTGCTCCCGAACCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QCRVVRKELRAS*GKMMAVLPNRR Trigger: CCTGCGGTTCGGGAGCACCGCCATCATCTTCCCCAAACTGGCCCGCAGCTCCTTCCGCACCACCCTGCACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
||
| CDS CCA 72 bp | GAGTTTGGAAGAGGGAAGGAGCCGCTGGAGCTTCAGTaGTGGTCCGGGTGTCCAGGGTGCCTGGCGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: EFGRGKEPLELQ*WSGCPGCLATG Trigger: CCCTGTCGCCAGGCACCCTGGACACCCGGACCACCACTGAAGCTCCAGCGGCTCCTTCCCTCTTCCAAACTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
||
| CDS CCA 72 bp | CAGAGCTGGGGGAGTTTGGAAGAGGGAAGGAGCCGCTaGAGCTTCAGTGGTGGTCCGGGTGTCCAGGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: QSWGSLEEGRSR*SFSGGPGVQGA Trigger: GGCACCCTGGACACCCGGACCACCACTGAAGCTCCAGCGGCTCCTTCCCTCTTCCAAACTCCCCCAGCTCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
||
| CDS TCA 72 bp | AGTTGGGCGCCGCCACTATGGTCTCACTGTAGGCCGTaGCCGTGGGCACTGGAGCGTAGAAGATCTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SWAPPLWSHCRP*PWALERRRSCL Trigger: GAGACAAGATCTTCTACGCTCCAGTGCCCACGGTCACGGCCTACAGTGAGACCATAGTGGCGGCGCCCAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS GCA 72 bp | AGCGGATTTCATGTGCGGGTTCTGGGTCCACCTCGATaGTCTCCCCAAAGAACACAGGCAGCAACCGTGACC | + |
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Preference number: 6 (lower is better) Translates to: SGFHVRVLGPPR*SPQRTQAATVT Trigger: GGTCACGGTTGCTGCCTGTGTTCTTTGGGGAGAGCATCGAGGTGGACCCAGAACCCGCACATGAAATCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS TCA 72 bp | CTCGATGCTCTCCCCAAAGAACACAGGCAGCAACCGTaGCCTCATCTCCAGAGCTGGGGGAGTTTGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LDALPKEHRQQP*PHLQSWGSLEE Trigger: CTCTTCCAAACTCCCCCAGCTCTGGAGATGAGGTCACGGTTGCTGCCTGTGTTCTTTGGGGAGAGCATCGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS GCA 72 bp | GGCGTAGGTGATCTCAGAGTTGCAGCGGATTTCATGTaGGGGTTCTGGGTCCACCTCGATGCTCTCCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: GVGDLRVAADFM*GFWVHLDALPK Trigger: TTTGGGGAGAGCATCGAGGTGGACCCAGAACCCGCACATGAAATCCGCTGCAACTCTGAGATCACCTACGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS CCA 72 bp | GATCTCAGAGTTGCAGCGGATTTCATGTGCGGGTTCTaGGTCCACCTCGATGCTCTCCCCAAAGAACACAGG | + |
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Preference number: 6 (lower is better) Translates to: DLRVAADFMCGF*VHLDALPKEHR Trigger: CCTGTGTTCTTTGGGGAGAGCATCGAGGTGGACCCAGAACCCGCACATGAAATCCGCTGCAACTCTGAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS CCA 72 bp | CACTATGGTCTCACTGTAGGCCGTGACCGTGGGCACTaGAGCGTAGAAGATCTTGTCTCGGAAGTATCTCTC | + |
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Preference number: 6 (lower is better) Translates to: HYGLTVGRDRGH*SVEDLVSEVSL Trigger: GAGAGATACTTCCGAGACAAGATCTTCTACGCTCCAGTGCCCACGGTCACGGCCTACAGTGAGACCATAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS TCA 72 bp | AGATCTTGTCTCGGAAGTATCTCTCTGAGGCGTAGGTaGTCTCAGAGTTGCAGCGGATTTCATGTGCGGGTT | + |
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Preference number: 6 (lower is better) Translates to: RSCLGSISLRRR*SQSCSGFHVRV Trigger: AACCCGCACATGAAATCCGCTGCAACTCTGAGATCACCTACGCCTCAGAGAGATACTTCCGAGACAAGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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| CDS TCA 72 bp | TGGAGCGTAGAAGATCTTGTCTCGGAAGTATCTCTCTaGGGCGTAGGTGATCTCAGAGTTGCAGCGGATTTC | + |
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Preference number: 6 (lower is better) Translates to: WSVEDLVSEVSL*GVGDLRVAADF Trigger: GAAATCCGCTGCAACTCTGAGATCACCTACGCCTCAGAGAGATACTTCCGAGACAAGATCTTCTACGCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036109.8 ENSMUST00000197746.2 |
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