Pregenerated sensors for RFFL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020696Ensembl transcript IDs: ENSMUST00000021036.13, ENSMUST00000071152.14, ENSMUST00000074515.11, ENSMUST00000093975.12, ENSMUST00000103218.3, ENSMUST00000108173.10, ENSMUST00000126660.2
Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCAGTTGCTCACAGTAGACTGCCCTTGTGTATTGGACCAACCCTaGGCCCAGACATCGTGGGCTATGTCCTGTAAGGCACTGAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: CQLLTVDCPCVLDQP*AQTSWAMSCKALKK Trigger: TTTCTTCAGTGCCTTACAGGACATAGCCCACGATGTCTGGGCTCAGGGTTGGTCCAATACACAAGGGCAGTCTACTGTGAGCAACTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR GCA 90 bp | GCCCTCGCCAGGAACTGTGGGAGACTGGTTTCCTTGTTTATGCTGTaGCACCTCTTGAGAATCCTCTCTCTGTTCTTACCAACTCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: ALARNCGRLVSLFML*HLLRILSLFLPTQQ Trigger: CTGCTGAGTTGGTAAGAACAGAGAGAGGATTCTCAAGAGGTGGCACAGCATAAACAAGGAAACCAGTCTCCCACAGTTCCTGGCGAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR GCA 90 bp | GCAGTCTCTGAAGAGCAATGTTCTGCATGTGGCCTGATGTCTGCCTaGATTTACAAGTTCTCTGGCATTATCCCCCACACACCAGATGGG | + |
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Preference number: 1 (lower is better) Translates to: AVSEEQCSACGLMSA*IYKFSGIIPHTPDG Trigger: CCCATCTGGTGTGTGGGGGATAATGCCAGAGAACTTGTAAATGCAGGCAGACATCAGGCCACATGCAGAACATTGCTCTTCAGAGACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR CCA 90 bp | GACCATCACCTGAAACCTCCCACACGGCTGGAAACGTGCCCTCTGTaGCCTTTGTTTACAATAGTGCCAGTTGATGACAGGCATTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: DHHLKPPTRLETCPL*PLFTIVPVDDRHCS Trigger: TGAACAATGCCTGTCATCAACTGGCACTATTGTAAACAAAGGCCACAGAGGGCACGTTTCCAGCCGTGTGGGAGGTTTCAGGTGATGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR TCA 90 bp | TCACTGTTCAGGGAGGGAGGGCAAGGGAGTCTTTGTGGAGGGATCTaGATCCCTGACATCCACAAAAGCTTTGACCCAAAATCTGGTCAT | + |
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Preference number: 1 (lower is better) Translates to: SLFREGGQGSLCGGI*IPDIHKSFDPKSGH Trigger: ATGACCAGATTTTGGGTCAAAGCTTTTGTGGATGTCAGGGATTCAGATCCCTCCACAAAGACTCCCTTGCCCTCCCTCCCTGAACAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR TCA 90 bp | AGAAGCGGGATGCAGTCTCTGAAGAGCAATGTTCTGCATGTGGCCTaGTGTCTGCCTGCATTTACAAGTTCTCTGGCATTATCCCCCACA | + |
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Preference number: 1 (lower is better) Translates to: RSGMQSLKSNVLHVA*CLPAFTSSLALSPT Trigger: TGTGGGGGATAATGCCAGAGAACTTGTAAATGCAGGCAGACATCAGGCCACATGCAGAACATTGCTCTTCAGAGACTGCATCCCGCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR TCA 90 bp | TCCAACTGTCCCACAGTTTCTCCAATGCATTCTTGTGATCTTGGGTaGGTCACACCACAGAGCAAGGGTACCTTGATCAAGACCAGGTGG | + |
|
Preference number: 1 (lower is better) Translates to: SNCPTVSPMHSCDLG*VTPQSKGTLIKTRW Trigger: CCACCTGGTCTTGATCAAGGTACCCTTGCTCTGTGGTGTGACTCACCCAAGATCACAAGAATGCATTGGAGAAACTGTGGGACAGTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR CCA 90 bp | TCACAGTGGAGTCCAGGAGCAGCAAAATCAGTGGGCATGCTAATCTaGAAACATTGTAAACGACAGCATTCACTGTTCAGGGAGGGAGGG | + |
|
Preference number: 1 (lower is better) Translates to: SQWSPGAAKSVGMLI*KHCKRQHSLFREGG Trigger: CCCTCCCTCCCTGAACAGTGAATGCTGTCGTTTACAATGTTTCCAGATTAGCATGCCCACTGATTTTGCTGCTCCTGGACTCCACTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR CCA 90 bp | CAAGCAGAAGCTGCTTTGCGCTTTGAACACTTGGACCAAGCAGCTTaGTCCAGCATCAGACTATTCTTCCTCATCACACAGGGCCAAAAG | + |
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Preference number: 1 (lower is better) Translates to: QAEAALRFEHLDQAA*SSIRLFFLITQGQK Trigger: CTTTTGGCCCTGTGTGATGAGGAAGAATAGTCTGATGCTGGACCAAGCTGCTTGGTCCAAGTGTTCAAAGCGCAAAGCAGCTTCTGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR TCA 90 bp | TATGAGGGAGAGCCAGCCGGCTTTAATGTTATTCTTAGGTCTTACTaGGCTGTAAGATCAGACCTGTTTCACAGTGGAGTCCAGGAGCAG | + |
|
Preference number: 1 (lower is better) Translates to: YEGEPAGFNVILRSY*AVRSDLFHSGVQEQ Trigger: CTGCTCCTGGACTCCACTGTGAAACAGGTCTGATCTTACAGCTCAGTAAGACCTAAGAATAACATTAAAGCCGGCTGGCTCTCCCTCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR TCA 90 bp | TACTGTCAGTCTTTCAGGGTAACTTGTTCCTTTCCACTTAGCTCTTaGAGGCCCCTCTACAGTGGGACCGTAACTAACTTCACATGGTGC | + |
|
Preference number: 1 (lower is better) Translates to: YCQSFRVTCSFPLSS*RPLYSGTVTNFTWC Trigger: GCACCATGTGAAGTTAGTTACGGTCCCACTGTAGAGGGGCCTTCAAGAGCTAAGTGGAAAGGAACAAGTTACCCTGAAAGACTGACAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR TCA 90 bp | GCCAGTGCTTACTCTGTAGTCTGCTCTTTAGGCTGGGCCAACCTTTaGGACACACTTGTCTGTATTCAAAAGCTACCTACTGTCAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: ASAYSVVCSLGWANL*DTLVCIQKLPTVSL Trigger: AAGACTGACAGTAGGTAGCTTTTGAATACAGACAAGTGTGTCTCAAAGGTTGGCCCAGCCTAAAGAGCAGACTACAGAGTAAGCACTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR TCA 90 bp | GGAACTGTGGGAGACTGGTTTCCTTGTTTATGCTGTGCCACCTCTTaGGAATCCTCTCTCTGTTCTTACCAACTCAGCAGGCTTACATAT | + |
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Preference number: 1 (lower is better) Translates to: GTVGDWFPCLCCATS*ESSLCSYQLSRLTY Trigger: ATATGTAAGCCTGCTGAGTTGGTAAGAACAGAGAGAGGATTCTCAAGAGGTGGCACAGCATAAACAAGGAAACCAGTCTCCCACAGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR GCA 90 bp | CTGGTAAGTAAAGCATTTAACTCTAGTCTCAAGCAGAAGCTGCTTTaGGCTTTGAACACTTGGACCAAGCAGCTTGGTCCAGCATCAGAC | + |
|
Preference number: 1 (lower is better) Translates to: LVSKAFNSSLKQKLL*ALNTWTKQLGPASD Trigger: GTCTGATGCTGGACCAAGCTGCTTGGTCCAAGTGTTCAAAGCGCAAAGCAGCTTCTGCTTGAGACTAGAGTTAAATGCTTTACTTACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR CCA 90 bp | TTTAACTCTAGTCTCAAGCAGAAGCTGCTTTGCGCTTTGAACACTTaGACCAAGCAGCTTGGTCCAGCATCAGACTATTCTTCCTCATCA | + |
|
Preference number: 1 (lower is better) Translates to: FNSSLKQKLLCALNT*TKQLGPASDYSSSS Trigger: TGATGAGGAAGAATAGTCTGATGCTGGACCAAGCTGCTTGGTCCAAGTGTTCAAAGCGCAAAGCAGCTTCTGCTTGAGACTAGAGTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR TCA 90 bp | GTAAAGCATTTAACTCTAGTCTCAAGCAGAAGCTGCTTTGCGCTTTaGACACTTGGACCAAGCAGCTTGGTCCAGCATCAGACTATTCTT | + |
|
Preference number: 1 (lower is better) Translates to: VKHLTLVSSRSCFAL*TLGPSSLVQHQTIL Trigger: AAGAATAGTCTGATGCTGGACCAAGCTGCTTGGTCCAAGTGTTCAAAGCGCAAAGCAGCTTCTGCTTGAGACTAGAGTTAAATGCTTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR TCA 90 bp | ATGCTGGAAAATGAGGACCAGAAGACAAAGACAAAGCCGCTGCCTTaGTTTCTCTTTCCTCATAATCCAAAGTTAAGGATGATACAAAGT | + |
|
Preference number: 1 (lower is better) Translates to: MLENEDQKTKTKPLP*FLFPHNPKLRMIQS Trigger: ACTTTGTATCATCCTTAACTTTGGATTATGAGGAAAGAGAAATCAAGGCAGCGGCTTTGTCTTTGTCTTCTGGTCCTCATTTTCCAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR CAA 90 bp | GTCCTAGTCTTAAGAACACTGCCAGTTGCTCACAGTAGACTGCCCTaGTGTATTGGACCAACCCTGAGCCCAGACATCGTGGGCTATGTC | + |
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Preference number: 2 (lower is better) Translates to: VLVLRTLPVAHSRLP*CIGPTLSPDIVGYV Trigger: GACATAGCCCACGATGTCTGGGCTCAGGGTTGGTCCAATACACAAGGGCAGTCTACTGTGAGCAACTGGCAGTGTTCTTAAGACTAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR CAA 90 bp | GGTCTAAGCCTGGCCCTCGCCAGGAACTGTGGGAGACTGGTTTCCTaGTTTATGCTGTGCCACCTCTTGAGAATCCTCTCTCTGTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: GLSLALARNCGRLVS*FMLCHLLRILSLFL Trigger: TAAGAACAGAGAGAGGATTCTCAAGAGGTGGCACAGCATAAACAAGGAAACCAGTCTCCCACAGTTCCTGGCGAGGGCCAGGCTTAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGCCTCATGCACTGTCCTGTGTGTCTGCTTTCCAAGAACTCCATGTACAGCAAATGTGCTGGGGGTaGGGTGGGAGAAAGACCATT | + |
|
Preference number: 2 (lower is better) Translates to: PVPHALSCVSAFQELHVQQMCWG*GGRKTI Trigger: AATGGTCTTTCTCCCACCCCACCCCCAGCACATTTG...CTGTACATGGAGTTCTTGGAAAGCAGACACACAGGACAGTGCATGAGGCACTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR CAA 90 bp | CAGACACCTTGTTTAAGGTGTGCAGCGCACACCCTGGTTCAGAGGTaGTCCAGGAGGAGGCCTAGCTTACCAACTCATGTTAAAAGTTCG | + |
|
Preference number: 2 (lower is better) Translates to: QTPCLRCAAHTLVQR*SRRRPSLPTHVKSS Trigger: CGAACTTTTAACATGAGTTGGTAAGCTAGGCCTCCTCCTGGACAACCTCTGAACCAGGGTGTGCGCTGCACACCTTAAACAAGGTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR-3UTR TCA 90 bp | GGTACAGGCCAGTGCTTACTCTGTAGTCTGCTCTTTAGGCTGGGCCAACCTTTGAGCAGAACTTATGATTaGCAGGAGGAGTGGTGTACA | + |
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Preference number: 2 (lower is better) Translates to: GTGQCLLCSLLFRLGQPLSRTYD*QEEWCT Trigger: TGTACACCACTCCTCCTGTCAATCATAAGTTCTGCT...CAAAGGTTGGCCCAGCCTAAAGAGCAGACTACAGAGTAAGCACTGGCCTGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGCCTCATGCACTGTCCTGTGTGTCTGCTTTCCAAGAACTCCATGTACAGAAACAGCACCATCTCTaGAGGACTTCCCAGCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: PVPHALSCVSAFQELHVQKQHHL*RTSQQL Trigger: TAACTGCTGGGAAGTCCTTCAGAGATGGTGCTGTTT...CTGTACATGGAGTTCTTGGAAAGCAGACACACAGGACAGTGCATGAGGCACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR-3UTR TCA 90 bp | CCAAAATCTGGTCATCTGGACTTCGAATGCAGAGGTAAGTGGGCCTGGCATCTCAAACAGCACCATCTCTaGAGGACTTCCCAGCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: PKSGHLDFECRGKWAWHLKQHHL*RTSQQL Trigger: TAACTGCTGGGAAGTCCTTCAGAGATGGTGCTGTTT...GAGATGCCAGGCCCACTTACCTCTGCATTCGAAGTCCAGATGACCAGATTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR-3UTR TCA 90 bp | AAACATTGTAAACGACAGCATTCACTGTTCAGGGAGGGAGGGCAAGGGAGTCTTAAAGAATGCTTGTCTTaGCCTGCCCGAGCAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: KHCKRQHSLFREGGQGSLKECLS*PARAAE Trigger: CTCAGCTGCTCGGGCAGGTCAAGACAAGCATTCTTT...AAGACTCCCTTGCCCTCCCTCCCTGAACAGTGAATGCTGTCGTTTACAATGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR-3UTR TCA 90 bp | AAACATTGTAAACGACAGCATTCACTGTTCAGGGAGGGAGGGCAAGGGAGTCTTTGGGCCTGGCATCTCTaGCAACAGCTTCATGGAACT | + |
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Preference number: 2 (lower is better) Translates to: KHCKRQHSLFREGGQGSLWAWHL*QQLHGT Trigger: AGTTCCATGAAGCTGTTGTCAGAGATGCCAGGCCCA...AAGACTCCCTTGCCCTCCCTCCCTGAACAGTGAATGCTGTCGTTTACAATGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR-3UTR GCA 90 bp | CCAAAATCTGGTCATCTGGACTTCGAATGCAGAGGTAAGTGGGCCTGGCATCTCCACCTAAAACAAGCATaGCAGGCAACTCTGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: PKSGHLDFECRGKWAWHLHLKQA*QATLLV Trigger: GACAAGCAGAGTTGCCTGGCATGCTTGTTTTAGGTG...GAGATGCCAGGCCCACTTACCTCTGCATTCGAAGTCCAGATGACCAGATTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR-3UTR TCA 90 bp | GGGGTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGTAGGCATTCACCCATGTaGTGTGAACCAGTTCCCACT | + |
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Preference number: 2 (lower is better) Translates to: GVGERPFLAELMIDRRSGRHSPM*CEPVPT Trigger: AGTGGGAACTGGTTCACATCACATGGGTGAATGCCT...ACCACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGCCTCATGCACTGTCCTGTGTGTCTGCTTTCCAAGAACTCCATGTACAGATCCAAACTCTGACCTaGGGAATACTATTGGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: PVPHALSCVSAFQELHVQIQTLT*GILLAQ Trigger: TTGGGCCAATAGTATTCCTCAGGTCAGAGTTTGGAT...CTGTACATGGAGTTCTTGGAAAGCAGACACACAGGACAGTGCATGAGGCACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR CAA 90 bp | GGCCAGTGCTTACTCTGTAGTCTGCTCTTTAGGCTGGGCCAACCTTaGAGACACACTTGTCTGTATTCAAAAGCTACCTACTGTCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: GQCLLCSLLFRLGQP*RHTCLYSKATYCQS Trigger: AGACTGACAGTAGGTAGCTTTTGAATACAGACAAGTGTGTCTCAAAGGTTGGCCCAGCCTAAAGAGCAGACTACAGAGTAAGCACTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR-3UTR TCA 90 bp | AGTCATAGTCTAACACATCCAGTGCCTCATGCACTGTCCTGTGTGTCTGCTTTCACCATCACCATCCAATaGTCACAGATGCAGGCATTC | + |
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Preference number: 2 (lower is better) Translates to: SHSLTHPVPHALSCVSAFTITIQ*SQMQAF Trigger: GAATGCCTGCATCTGTGATCATTGGATGGTGATGGT...GAAAGCAGACACACAGGACAGTGCATGAGGCACTGGATGTGTTAGACTATGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR-3UTR TCA 90 bp | ACTTCGAATGCAGAGGTAAGTGGGCCTGGCATCTCTGACAACAGCTTCATGGAAAGCAGAACTTATGATTaGCAGGAGGAGTGGTGTACA | + |
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Preference number: 2 (lower is better) Translates to: TSNAEVSGPGISDNSFMESRTYD*QEEWCT Trigger: TGTACACCACTCCTCCTGTCAATCATAAGTTCTGCT...TTCCATGAAGCTGTTGTCAGAGATGCCAGGCCCACTTACCTCTGCATTCGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR-3UTR GCA 90 bp | GGGGTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGTCACCTAAAACAAGCATaGCAGGCAACTCTGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: GVGERPFLAELMIDRRSGHLKQA*QATLLV Trigger: GACAAGCAGAGTTGCCTGGCATGCTTGTTTTAGGTG...ACCACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR-3UTR GCA 90 bp | AGTCATAGTCTAACACATCCAGTGCCTCATGCACTGTCCTGTGTGTCTGCTTTCCACCTAAAACAAGCATaGCAGGCAACTCTGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: SHSLTHPVPHALSCVSAFHLKQA*QATLLV Trigger: GACAAGCAGAGTTGCCTGGCATGCTTGTTTTAGGTG...GAAAGCAGACACACAGGACAGTGCATGAGGCACTGGATGTGTTAGACTATGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR-3UTR GCA 90 bp | GGTACAGGCCAGTGCTTACTCTGTAGTCTGCTCTTTAGGCTGGGCCAACCTTTGCAACTGAAATCTTGGTaGAATCAGCAAAATCCACAG | + |
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Preference number: 2 (lower is better) Translates to: GTGQCLLCSLLFRLGQPLQLKSW*NQQNPQ Trigger: CTGTGGATTTTGCTGATTGCACCAAGATTTCAGTTG...CAAAGGTTGGCCCAGCCTAAAGAGCAGACTACAGAGTAAGCACTGGCCTGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR-3UTR TCA 90 bp | GGTACAGGCCAGTGCTTACTCTGTAGTCTGCTCTTTAGGCTGGGCCAACCTTTGGCTATTTCCAACCTATaGAACAGCATCTTTGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: GTGQCLLCSLLFRLGQPLAISNL*NSIFEN Trigger: GTTTTCAAAGATGCTGTTTCATAGGTTGGAAATAGC...CAAAGGTTGGCCCAGCCTAAAGAGCAGACTACAGAGTAAGCACTGGCCTGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| 3UTR-3UTR CCA 90 bp | TCTAACACATCCAGTGCCTCATGCACTGTCCTGTGTGTCTGCTTTCCAAGAACTGACTGGTCCACGTTCTaGAAAGACCTCTTCATTGAT | + |
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Preference number: 2 (lower is better) Translates to: SNTSSASCTVLCVCFPRTDWSTF*KDLFID Trigger: ATCAATGAAGAGGTCTTTCCAGAACGTGGACCAGTC...AGTTCTTGGAAAGCAGACACACAGGACAGTGCATGAGGCACTGGATGTGTTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR-3UTR TCA 90 bp | GTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGTGTATTCACCCATGTGATGTaGACCAGTTCCCACTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: VGERPFLAELMIDRRSGVFTHVM*TSSHWF Trigger: AAACCAGTGGGAACTGGTTCACATCACATGGGTGAA...TACACCACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR-3UTR TCA 90 bp | TTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGATTCACCCATGTGATGTaGACCAGTTCCCACTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: LTGGVVYRCMKWILGQERFTHVM*TSSHWF Trigger: AAACCAGTGGGAACTGGTTCACATCACATGGGTGAA...TCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR-3UTR TCA 90 bp | ATGAGGACCAGAAGACAAAGACAAAGCCGCTGCCTTGATTTCTCTTTCCTCATATTCACCCATGTGATGTaGACCAGTTCCCACTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: MRTRRQRQSRCLDFSFLIFTHVM*TSSHWF Trigger: AAACCAGTGGGAACTGGTTCACATCACATGGGTGAA...TATGAGGAAAGAGAAATCAAGGCAGCGGCTTTGTCTTTGTCTTCTGGTCCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR-3UTR TCA 90 bp | GTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGTGTAACCATCACCATCCAATaGTCACAGATGCAGGCATTC | + |
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Preference number: 2 (lower is better) Translates to: VGERPFLAELMIDRRSGVTITIQ*SQMQAF Trigger: GAATGCCTGCATCTGTGATCATTGGATGGTGATGGT...TACACCACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR-3UTR TCA 90 bp | ATGAGGACCAGAAGACAAAGACAAAGCCGCTGCCTTGATTTCTCTTTCCTCATAACCATCACCATCCAATaGTCACAGATGCAGGCATTC | + |
|
Preference number: 2 (lower is better) Translates to: MRTRRQRQSRCLDFSFLITITIQ*SQMQAF Trigger: GAATGCCTGCATCTGTGATCATTGGATGGTGATGGT...TATGAGGAAAGAGAAATCAAGGCAGCGGCTTTGTCTTTGTCTTCTGGTCCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR TCA 90 bp | GAAAATCTTAATGTAAGCCACTTGGAGCTACACATTTACATCCGAGAGATCTCAACCTGCCCGAGCAGCTaGGAACAGAGTGCAGTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: ENLNVSHLELHIYIREISTCPSS*EQSAVK Trigger: CTTAACTGCACTCTGTTCTCAGCTGCTCGGGCAGGT...TGAGATCTCTCGGATGTAAATGTGTAGCTCCAAGTGGCTTACATTAAGATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGCAGTTATGAGGGAGAGCCAGCCGGCTTTAATGTTATTCTTAGGTCTTACCACCTAAAACAAGCATaGCAGGCAACTCTGCTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: ESSYEGEPAGFNVILRSYHLKQA*QATLLV Trigger: GACAAGCAGAGTTGCCTGGCATGCTTGTTTTAGGTG...GTAAGACCTAAGAATAACATTAAAGCCGGCTGGCTCTCCCTCATAACTGCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGTGTAAGTTCCCACTGGTTTTaGGCTCTGCCACCTAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: VGERPFLAELMIDRRSGVSSHWF*ALPPKT Trigger: TGTTTTAGGTGGCAGAGCCCAAAACCAGTGGGAACT...TACACCACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR CCA 90 bp | ATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGAGTTCCCACTGGTTTTaGGCTCTGCCACCTAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: IDRRSGVQMYEMDLRTGESSHWF*ALPPKT Trigger: TGTTTTAGGTGGCAGAGCCCAAAACCAGTGGGAACT...CTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR CCA 90 bp | CTCCACTTTTCCAAGTCAGTCATGAGTGAGTGGTTGGTTATTCCAGTCTCACATAGTTCCCACTGGTTTTaGGCTCTGCCACCTAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: LHFSKSVMSEWLVIPVSHSSHWF*ALPPKT Trigger: TGTTTTAGGTGGCAGAGCCCAAAACCAGTGGGAACT...ATGTGAGACTGGAATAACCAACCACTCACTCATGACTGACTTGGAAAAGTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR CAA 90 bp | AGTAAAGCATTTAACTCTAGTCTCAAGCAGAAGCTGCTTTGCGCTTaGAACACTTGGACCAAGCAGCTTGGTCCAGCATCAGACTATTCT | + |
|
Preference number: 2 (lower is better) Translates to: SKAFNSSLKQKLLCA*NTWTKQLGPASDYS Trigger: AGAATAGTCTGATGCTGGACCAAGCTGCTTGGTCCAAGTGTTCAAAGCGCAAAGCAGCTTCTGCTTGAGACTAGAGTTAAATGCTTTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR-3UTR TCA 90 bp | CTTATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAAGGCATTCACCCATGTaGTGTGAACCAGTTCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: LMIDRRSGVQMYEMDLRTRHSPM*CEPVPT Trigger: AGTGGGAACTGGTTCACATCACATGGGTGAATGCCT...TGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR TCA 90 bp | CCAAAGTTAAGGATGATACAAAGTCAAACCCAAAGAGAAACAGCACCATCTCTGAGGCATTCACCCATGTaGTGTGAACCAGTTCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: PKLRMIQSQTQRETAPSLRHSPM*CEPVPT Trigger: AGTGGGAACTGGTTCACATCACATGGGTGAATGCCT...CAGAGATGGTGCTGTTTCTCTTTGGGTTTGACTTTGTATCATCCTTAACTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR TCA 90 bp | GTTCAGCCCTTTGTCCCTTTAATGCCTTACTATATATTTACTCCAACTCACTGTGCGGGATGCAGTCTCTaGAGAGCAATGTTCTGCATG | + |
|
Preference number: 2 (lower is better) Translates to: VQPFVPLMPYYIFTPTHCAGCSL*RAMFCM Trigger: CATGCAGAACATTGCTCTTCAGAGACTGCATCCCGC...ACAGTGAGTTGGAGTAAATATATAGTAAGGCATTAAAGGGACAAAGGGCTGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR-3UTR GCA 90 bp | CTCCACTTTTCCAAGTCAGTCATGAGTGAGTGGTTGGTTATTCCAGTCTCACATCAAAGACAAAGCCGCTaGCTTGATTTCTCTTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LHFSKSVMSEWLVIPVSHQRQSR*LDFSFL Trigger: GAGGAAAGAGAAATCAAGGCAGCGGCTTTGTCTTTG...ATGTGAGACTGGAATAACCAACCACTCACTCATGACTGACTTGGAAAAGTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR GCA 90 bp | CTCCACTTTTCCAAGTCAGTCATGAGTGAGTGGTTGGTTATTCCAGTCTCACATACTGTCCTGTGTGTCTaGTTTCCAAGAACTCCATGT | + |
|
Preference number: 2 (lower is better) Translates to: LHFSKSVMSEWLVIPVSHTVLCV*FPRTPC Trigger: ACATGGAGTTCTTGGAAAGCAGACACACAGGACAGT...ATGTGAGACTGGAATAACCAACCACTCACTCATGACTGACTTGGAAAAGTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR CCA 90 bp | CTCCACTTTTCCAAGTCAGTCATGAGTGAGTGGTTGGTTATTCCAGTCTCACATGACTGGTCCACGTTCTaGAAAGACCTCTTCATTGAT | + |
|
Preference number: 2 (lower is better) Translates to: LHFSKSVMSEWLVIPVSHDWSTF*KDLFID Trigger: ATCAATGAAGAGGTCTTTCCAGAACGTGGACCAGTC...ATGTGAGACTGGAATAACCAACCACTCACTCATGACTGACTTGGAAAAGTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR CCA 90 bp | ACTTCGAATGCAGAGGTAAGTGGGCCTGGCATCTCTGACAACAGCTTCATGGAAAGTATTTTAGCATGCTaGAAAATGAGGACCAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: TSNAEVSGPGISDNSFMESILAC*KMRTRR Trigger: TCTTCTGGTCCTCATTTTCCAGCATGCTAAAATACT...TTCCATGAAGCTGTTGTCAGAGATGCCAGGCCCACTTACCTCTGCATTCGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR TCA 90 bp | CCAAAGTTAAGGATGATACAAAGTCAAACCCAAAGAGAAACAGCACCATCTCTGTTCACCCATGTGATGTaGACCAGTTCCCACTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PKLRMIQSQTQRETAPSLFTHVM*TSSHWF Trigger: AAACCAGTGGGAACTGGTTCACATCACATGGGTGAA...CAGAGATGGTGCTGTTTCTCTTTGGGTTTGACTTTGTATCATCCTTAACTTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR CCA 90 bp | AAACATTGTAAACGACAGCATTCACTGTTCAGGGAGGGAGGGCAAGGGAGTCTTTACAGATGTATGAAATaGATCTTAGGACAGGAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KHCKRQHSLFREGGQGSLYRCMK*ILGQER Trigger: TCTCTCCTGTCCTAAGATCCATTTCATACATCTGTA...AAGACTCCCTTGCCCTCCCTCCCTGAACAGTGAATGCTGTCGTTTACAATGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR TCA 90 bp | GTTCAGCCCTTTGTCCCTTTAATGCCTTACTATATATTTACTCCAACTCACTGTTTCACCCATGTGATGTaGACCAGTTCCCACTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: VQPFVPLMPYYIFTPTHCFTHVM*TSSHWF Trigger: AAACCAGTGGGAACTGGTTCACATCACATGGGTGAA...ACAGTGAGTTGGAGTAAATATATAGTAAGGCATTAAAGGGACAAAGGGCTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR-3UTR CCA 90 bp | TTTAGGCAAATGAGAAGACTTAAAAGATACATTAACACACAGAAAGCCAGAGAGCAAATGTGCTGGGGGTaGGGTGGGAGAAAGACCATT | + |
|
Preference number: 2 (lower is better) Translates to: FRQMRRLKRYINTQKAREQMCWG*GGRKTI Trigger: AATGGTCTTTCTCCCACCCCACCCCCAGCACATTTG...CTCTCTGGCTTTCTGTGTGTTAATGTATCTTTTAAGTCTTCTCATTTGCCTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR GCA 90 bp | TCACACAGGGCCAAAAGTTCAGCCCTTTGTCCCTTTAATGCCTTACTATATATTCCACAGTTTCTCCAATaGATTCTTGTGATCTTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SHRAKSSALCPFNALLYIPQFLQ*ILVILG Trigger: ACCCAAGATCACAAGAATGCATTGGAGAAACTGTGG...AATATATAGTAAGGCATTAAAGGGACAAAGGGCTGAACTTTTGGCCCTGTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR-3UTR TCA 90 bp | GTTCAGCCCTTTGTCCCTTTAATGCCTTACTATATATTTACTCCAACTCACTGTTATTTTGTGCTTTGTTaGGCTGTTCTCAGCTGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: VQPFVPLMPYYIFTPTHCYFVLC*AVLSCV Trigger: GACACAGCTGAGAACAGCTCAACAAAGCACAAAATA...ACAGTGAGTTGGAGTAAATATATAGTAAGGCATTAAAGGGACAAAGGGCTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR-3UTR CCA 90 bp | GAAAATCTTAATGTAAGCCACTTGGAGCTACACATTTACATCCGAGAGATCTCAGTGGGCATGCTAATCTaGAAACATTGTAAACGACAG | + |
|
Preference number: 2 (lower is better) Translates to: ENLNVSHLELHIYIREISVGMLI*KHCKRQ Trigger: CTGTCGTTTACAATGTTTCCAGATTAGCATGCCCAC...TGAGATCTCTCGGATGTAAATGTGTAGCTCCAAGTGGCTTACATTAAGATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR CCA 90 bp | GAAAATCTTAATGTAAGCCACTTGGAGCTACACATTTACATCCGAGAGATCTCATCTGAAGGAATTCAGTaGAGAAGCCTAAGCATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ENLNVSHLELHIYIREISSEGIQ*RSLSIS Trigger: AGAAATGCTTAGGCTTCTCCACTGAATTCCTTCAGA...TGAGATCTCTCGGATGTAAATGTGTAGCTCCAAGTGGCTTACATTAAGATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR TCA 72 bp | GGTGGCCAAGCACCTCCAGAAGCGGGATGCAGTCTCTaGAGAGCAATGTTCTGCATGTGGCCTGATGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GGQAPPEAGCSL*RAMFCMWPDVC Trigger: GCAGACATCAGGCCACATGCAGAACATTGCTCTTCAGAGACTGCATCCCGCTTCTGGAGGTGCTTGGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR CCA 72 bp | ACACCACAGAGCAAGGGTACCTTGATCAAGACCAGGTaGCCAAGCACCTCCAGAAGCGGGATGCAGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TPQSKGTLIKTR*PSTSRSGMQSL Trigger: CAGAGACTGCATCCCGCTTCTGGAGGTGCTTGGCCACCTGGTCTTGATCAAGGTACCCTTGCTCTGTGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR CCA 72 bp | TACACTCCCCTCCCCTCAGGCACCTCTTCAGGTAGGTaGGTACAGGCCAGTGCTTACTCTGTAGTCTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: YTPLPSGTSSGR*VQASAYSVVCS Trigger: AGAGCAGACTACAGAGTAAGCACTGGCCTGTACCCACCTACCTGAAGAGGTGCCTGAGGGGAGGGGAGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR GCA 72 bp | CAGCTGCCACTAACCTCAGACACCTTGTTTAAGGTGTaGAGCGCACACCCTGGTTCAGAGGTTGTCCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QLPLTSDTLFKV*SAHPGSEVVQE Trigger: CTCCTGGACAACCTCTGAACCAGGGTGTGCGCTGCACACCTTAAACAAGGTGTCTGAGGTTAGTGGCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR CCA 72 bp | GCATTCAGGTCTAAGCCTGGCCCTCGCCAGGAACTGTaGGAGACTGGTTTCCTTGTTTATGCTGTGCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: AFRSKPGPRQEL*ETGFLVYAVPP Trigger: AGGTGGCACAGCATAAACAAGGAAACCAGTCTCCCACAGTTCCTGGCGAGGGCCAGGCTTAGACCTGAATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR CCA 72 bp | CTGAAACCTCCCACACGGCTGGAAACGTGCCCTCTGTaGCCTTTGTTTACAATAGTGCCAGTTGATGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LKPPTRLETCPL*PLFTIVPVDDR Trigger: CCTGTCATCAACTGGCACTATTGTAAACAAAGGCCACAGAGGGCACGTTTCCAGCCGTGTGGGAGGTTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR TCA 72 bp | CCATCCAATGATCACAGATGCAGGCATTCACCCATGTaGTGTGAACCAGTTCCCACTGGTTTTGGGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PSNDHRCRHSPM*CEPVPTGFGLC Trigger: GCAGAGCCCAAAACCAGTGGGAACTGGTTCACATCACATGGGTGAATGCCTGCATCTGTGATCATTGGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR TCA 72 bp | AGGGAGGGAGGGCAAGGGAGTCTTTGTGGAGGGATCTaGATCCCTGACATCCACAAAAGCTTTGACCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: REGGQGSLCGGI*IPDIHKSFDPK Trigger: TTTTGGGTCAAAGCTTTTGTGGATGTCAGGGATTCAGATCCCTCCACAAAGACTCCCTTGCCCTCCCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR CCA 72 bp | ATGTGGCCTGATGTCTGCCTGCATTTACAAGTTCTCTaGCATTATCCCCCACACACCAGATGGGACAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: MWPDVCLHLQVL*HYPPHTRWDRH Trigger: ATGCCTGTCCCATCTGGTGTGTGGGGGATAATGCCAGAGAACTTGTAAATGCAGGCAGACATCAGGCCACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR GCA 72 bp | AACACATCCAGTGCCTCATGCACTGTCCTGTGTGTCTaGTTTCCAAGAACTCCATGTACAGCCAAGCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NTSSASCTVLCV*FPRTPCTAKLE Trigger: CTCTAGCTTGGCTGTACATGGAGTTCTTGGAAAGCAGACACACAGGACAGTGCATGAGGCACTGGATGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR GCA 72 bp | CCCCTCTACAGTGGGACCGTAACTAACTTCACATGGTaGTTCCCGTCTGCTCTTGAGAATCTTACACTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: PLYSGTVTNFTW*FPSALENLTLS Trigger: GCTAAGTGTAAGATTCTCAAGAGCAGACGGGAAGCACCATGTGAAGTTAGTTACGGTCCCACTGTAGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR CCA 72 bp | AGGCCCCTCTACAGTGGGACCGTAACTAACTTCACATaGTGCTTCCCGTCTGCTCTTGAGAATCTTACACTT | + |
|
Preference number: 3 (lower is better) Translates to: RPLYSGTVTNFT*CFPSALENLTL Trigger: AAGTGTAAGATTCTCAAGAGCAGACGGGAAGCACCATGTGAAGTTAGTTACGGTCCCACTGTAGAGGGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR CCA 72 bp | GCTGCTTTGCGCTTTGAACACTTGGACCAAGCAGCTTaGTCCAGCATCAGACTATTCTTCCTCATCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: AALRFEHLDQAA*SSIRLFFLITQ Trigger: CTGTGTGATGAGGAAGAATAGTCTGATGCTGGACCAAGCTGCTTGGTCCAAGTGTTCAAAGCGCAAAGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR TCA 72 bp | AGTGGTTGGTTATTCCAGTCTCACATAGCTACACAGTaGAGGGTAGTGTTAGCCAAGTTGAGCGTACACCCC | + |
|
Preference number: 3 (lower is better) Translates to: SGWLFQSHIATQ*RVVLAKLSVHP Trigger: GGGGTGTACGCTCAACTTGGCTAACACTACCCTTCACTGTGTAGCTATGTGAGACTGGAATAACCAACCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR TCA 72 bp | CCTAAGAGGCGTCCCTCCACTTTTCCAAGTCAGTCATaGGTGAGTGGTTGGTTATTCCAGTCTCACATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PKRRPSTFPSQS*VSGWLFQSHIA Trigger: AGCTATGTGAGACTGGAATAACCAACCACTCACTCATGACTGACTTGGAAAAGTGGAGGGACGCCTCTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR TCA 72 bp | CCCACAGTTTCTCCAATGCATTCTTGTGATCTTGGGTaGGTCACACCACAGAGCAAGGGTACCTTGATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: PTVSPMHSCDLG*VTPQSKGTLIK Trigger: CTTGATCAAGGTACCCTTGCTCTGTGGTGTGACTCACCCAAGATCACAAGAATGCATTGGAGAAACTGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR TCA 72 bp | TTAACTCTAGTCTCAAGCAGAAGCTGCTTTGCGCTTTaGACACTTGGACCAAGCAGCTTGGTCCAGCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: LTLVSSRSCFAL*TLGPSSLVQHQ Trigger: CTGATGCTGGACCAAGCTGCTTGGTCCAAGTGTTCAAAGCGCAAAGCAGCTTCTGCTTGAGACTAGAGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR TCA 72 bp | GGAGACTGGTTTCCTTGTTTATGCTGTGCCACCTCTTaGGAATCCTCTCTCTGTTCTTACCAACTCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GDWFPCLCCATS*ESSLCSYQLSR Trigger: CCTGCTGAGTTGGTAAGAACAGAGAGAGGATTCTCAAGAGGTGGCACAGCATAAACAAGGAAACCAGTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR GCA 72 bp | GAAGAGCAATGTTCTGCATGTGGCCTGATGTCTGCCTaGATTTACAAGTTCTCTGGCATTATCCCCCACACA | + |
|
Preference number: 3 (lower is better) Translates to: EEQCSACGLMSA*IYKFSGIIPHT Trigger: TGTGTGGGGGATAATGCCAGAGAACTTGTAAATGCAGGCAGACATCAGGCCACATGCAGAACATTGCTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR CCA 72 bp | AGTCTCAAGCAGAAGCTGCTTTGCGCTTTGAACACTTaGACCAAGCAGCTTGGTCCAGCATCAGACTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLKQKLLCALNT*TKQLGPASDYS Trigger: AGAATAGTCTGATGCTGGACCAAGCTGCTTGGTCCAAGTGTTCAAAGCGCAAAGCAGCTTCTGCTTGAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGACTGGTCGGAAAGACCTCTTCATaGATGACCATCACCATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GGVVYRCMKWILGQERLVGKTSS*MTITIQ Trigger: TTGGATGGTGATGGTCATCAATGAAGAGGTCTTTCC...GACCAGTCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR TCA 72 bp | TCTTTCAGGGTAACTTGTTCCTTTCCACTTAGCTCTTaGAGGCCCCTCTACAGTGGGACCGTAACTAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: SFRVTCSFPLSS*RPLYSGTVTNF Trigger: GAAGTTAGTTACGGTCCCACTGTAGAGGGGCCTTCAAGAGCTAAGTGGAAAGGAACAAGTTACCCTGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR GCA 72 bp | TTAGCTCCACTTCCAACTGTCCCACAGTTTCTCCAATaGATTCTTGTGATCTTGGGTGAGTCACACCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LAPLPTVPQFLQ*ILVILGESHHR Trigger: TCTGTGGTGTGACTCACCCAAGATCACAAGAATGCATTGGAGAAACTGTGGGACAGTTGGAAGTGGAGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR GCA 72 bp | AGGAACTGTGGGAGACTGGTTTCCTTGTTTATGCTGTaGCACCTCTTGAGAATCCTCTCTCTGTTCTTACCA | + |
|
Preference number: 3 (lower is better) Translates to: RNCGRLVSLFML*HLLRILSLFLP Trigger: TGGTAAGAACAGAGAGAGGATTCTCAAGAGGTGGCACAGCATAAACAAGGAAACCAGTCTCCCACAGTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR TCA 72 bp | TACAAAGTCAAACCCAAAGAGAAACAGCACCATCTCTaGAGGACTTCCCAGCAGTTAGGTCAGAGACTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: YKVKPKEKQHHL*RTSQQLGQRLV Trigger: AACCAGTCTCTGACCTAACTGCTGGGAAGTCCTTCAGAGATGGTGCTGTTTCTCTTTGGGTTTGACTTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR TCA 72 bp | GAGCCAGCCGGCTTTAATGTTATTCTTAGGTCTTACTaGGCTGTAAGATCAGACCTGTTTCACAGTGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: EPAGFNVILRSY*AVRSDLFHSGV Trigger: GACTCCACTGTGAAACAGGTCTGATCTTACAGCTCAGTAAGACCTAAGAATAACATTAAAGCCGGCTGGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGCAGTTATGAGGGAGAGCCAGCCGGCTTTAATGTTATTCTTAGGTCTTACGGAAAGACCTCTTCATaGATGACCATCACCATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: ESSYEGEPAGFNVILRSYGKTSS*MTITIQ Trigger: TTGGATGGTGATGGTCATCAATGAAGAGGTCTTTCC...GTAAGACCTAAGAATAACATTAAAGCCGGCTGGCTCTCCCTCATAACTGCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR GCA 72 bp | CTATCTTTCACCTGCTCTTTAAGACATGGATGTAGATaGTCTGATGAGGGCAGAGTAGGCAACATTCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSFTCSLRHGCR*SDEGRVGNIQS Trigger: AGACTGAATGTTGCCTACTCTGCCCTCATCAGAGCATCTACATCCATGTCTTAAAGAGCAGGTGAAAGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR-3UTR CAA 90 bp | ATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGGAAAGACCTCTTCATaGATGACCATCACCATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: MIDRRSGVQMYEMDLRTGGKTSS*MTITIQ Trigger: TTGGATGGTGATGGTCATCAATGAAGAGGTCTTTCC...TCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR-3UTR CAA 90 bp | TCACACAGGGCCAAAAGTTCAGCCCTTTGTCCCTTTAATGCCTTACTATATATTGGAAAGACCTCTTCATaGATGACCATCACCATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SHRAKSSALCPFNALLYIGKTSS*MTITIQ Trigger: TTGGATGGTGATGGTCATCAATGAAGAGGTCTTTCC...AATATATAGTAAGGCATTAAAGGGACAAAGGGCTGAACTTTTGGCCCTGTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| CDS-3UTR CCA 90 bp | CAGCGCACACCCTGGTTCAGAGGTTGTCCAGGAGGAGGCCTAGCTTACCAACTCCCTGGCTCCCTGTGGTaGTGGTGCCTCCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRTPWFRGCPGGGLAYQLPGSLW*WCLLRL Trigger: CAGCCTGAGGAGGCACCACCACCACAGGGAGCCAGG...GAGTTGGTAAGCTAGGCCTCCTCCTGGACAACCTCTGAACCAGGGTGTGCGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| CDS-3UTR GCA 90 bp | CAGCGCACACCCTGGTTCAGAGGTTGTCCAGGAGGAGGCCTAGCTTACCAACTCTCCCTGTGGTGGTGGTaGCTCCTCAGGCTGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QRTPWFRGCPGGGLAYQLSLWWW*LLRLSI Trigger: GATGGACAGCCTGAGGAGGCACCACCACCACAGGGA...GAGTTGGTAAGCTAGGCCTCCTCCTGGACAACCTCTGAACCAGGGTGTGCGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| CDS-3UTR TCA 90 bp | GGCATTCACCCATGTGATGTGAACCAGTTCCCACTGGTTTTGGGCTCTGCCACCGGCACTGTGCTGGTTTaGGGCTGGGTCAGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GIHPCDVNQFPLVLGSATGTVLV*GWVRKA Trigger: GGCCTTCCTGACCCAGCCTCAAACCAGCACAGTGCC...GGTGGCAGAGCCCAAAACCAGTGGGAACTGGTTCACATCACATGGGTGAATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GGACCAAGCAGCTTGGTCCAGCATCAGACTATTCTTCCTCATCACACAGGGCCAGGCTCCCTGTGGTGGTaGTGCCTCCTCAGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPSSLVQHQTILPHHTGPGSLWW*CLLRLS Trigger: GGACAGCCTGAGGAGGCACCACCACCACAGGGAGCC...TGGCCCTGTGTGATGAGGAAGAATAGTCTGATGCTGGACCAAGCTGCTTGGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| CDS-3UTR CCA 90 bp | GGCATTCACCCATGTGATGTGAACCAGTTCCCACTGGTTTTGGGCTCTGCCACCTGTCCTGGCTCCCTGTaGTGGTGGTGCCTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GIHPCDVNQFPLVLGSATCPGSL*WWCLLR Trigger: CCTGAGGAGGCACCACCACCACAGGGAGCCAGGACA...GGTGGCAGAGCCCAAAACCAGTGGGAACTGGTTCACATCACATGGGTGAATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR TCA 90 bp | TGTGAACCAGTTCCCACTGGTTTTGGGCTCTGCCACCTAAAACAAGCATGCCAGGGCTCCTCGTGGTCCTaGGACACATGGCCAACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CEPVPTGFGLCHLKQACQGSSWS*DTWPTA Trigger: GGCCGTTGGCCATGTGTCTCAGGACCACGAGGAGCC...CTGGCATGCTTGTTTTAGGTGGCAGAGCCCAAAACCAGTGGGAACTGGTTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR TCA 90 bp | ACAGATGCAGGCATTCACCCATGTGATGTGAACCAGTTCCCACTGGTTTTGGGCGGCTCCTCGTGGTCCTaGGACACATGGCCAACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TDAGIHPCDVNQFPLVLGGSSWS*DTWPTA Trigger: GGCCGTTGGCCATGTGTCTCAGGACCACGAGGAGCC...GCCCAAAACCAGTGGGAACTGGTTCACATCACATGGGTGAATGCCTGCATCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | TGTGAACCAGTTCCCACTGGTTTTGGGCTCTGCCACCTAAAACAAGCATGCCAGGGCTCCCTGTGGTGGTaGTGCCTCCTCAGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CEPVPTGFGLCHLKQACQGSLWW*CLLRLS Trigger: GGACAGCCTGAGGAGGCACCACCACCACAGGGAGCC...CTGGCATGCTTGTTTTAGGTGGCAGAGCCCAAAACCAGTGGGAACTGGTTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GCCCAGACATCGTGGGCTATGTCCTGTAAGGCACTGAAGAAACCAATGCTAGCCATGAGCTCCTCCCGCTaGAAGGCCGTGGCTCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AQTSWAMSCKALKKPMLAMSSSR*KAVARN Trigger: GTTCCGAGCCACGGCCTTCCAGCGGGAGGAGCTCAT...GGCTAGCATTGGTTTCTTCAGTGCCTTACAGGACATAGCCCACGATGTCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | ACTTCGAATGCAGAGGTAAGTGGGCCTGGCATCTCTGACAACAGCTTCATGGAACCTGGCTCCCTGTGGTaGTGGTGCCTCCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSNAEVSGPGISDNSFMEPGSLW*WCLLRL Trigger: CAGCCTGAGGAGGCACCACCACCACAGGGAGCCAGG...TTCCATGAAGCTGTTGTCAGAGATGCCAGGCCCACTTACCTCTGCATTCGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | ACAGATGCAGGCATTCACCCATGTGATGTGAACCAGTTCCCACTGGTTTTGGGCTGTCCTGGCTCCCTGTaGTGGTGGTGCCTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDAGIHPCDVNQFPLVLGCPGSL*WWCLLR Trigger: CCTGAGGAGGCACCACCACCACAGGGAGCCAGGACA...GCCCAAAACCAGTGGGAACTGGTTCACATCACATGGGTGAATGCCTGCATCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | TGTGAACCAGTTCCCACTGGTTTTGGGCTCTGCCACCTAAAACAAGCATGCCAGATGAGCTCCTCCCGCTaGAAGGCCGTGGCTCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CEPVPTGFGLCHLKQACQMSSSR*KAVARN Trigger: GTTCCGAGCCACGGCCTTCCAGCGGGAGGAGCTCAT...CTGGCATGCTTGTTTTAGGTGGCAGAGCCCAAAACCAGTGGGAACTGGTTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR TCA 90 bp | GGTGGGGTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGCTCCTCGTGGTCCTaGGACACATGGCCAACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGVGERPFLAELMIDRRSGSSWS*DTWPTA Trigger: GGCCGTTGGCCATGTGTCTCAGGACCACGAGGAGCC...ACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCACCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | GACCCAAAATCTGGTCATCTGGACTTCGAATGCAGAGGTAAGTGGGCCTGGCATTCCCTGTGGTGGTGGTaGCTCCTCAGGCTGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: DPKSGHLDFECRGKWAWHSLWWW*LLRLSI Trigger: GATGGACAGCCTGAGGAGGCACCACCACCACAGGGA...ATGCCAGGCCCACTTACCTCTGCATTCGAAGTCCAGATGACCAGATTTTGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | ATGATCACAGATGCAGGCATTCACCCATGTGATGTGAACCAGTTCCCACTGGTTGGCTCCCTGTGGTGGTaGTGCCTCCTCAGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MITDAGIHPCDVNQFPLVGSLWW*CLLRLS Trigger: GGACAGCCTGAGGAGGCACCACCACCACAGGGAGCC...AACCAGTGGGAACTGGTTCACATCACATGGGTGAATGCCTGCATCTGTGATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | AAACATTGTAAACGACAGCATTCACTGTTCAGGGAGGGAGGGCAAGGGAGTCTTGGCTCCCTGTGGTGGTaGTGCCTCCTCAGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KHCKRQHSLFREGGQGSLGSLWW*CLLRLS Trigger: GGACAGCCTGAGGAGGCACCACCACCACAGGGAGCC...AAGACTCCCTTGCCCTCCCTCCCTGAACAGTGAATGCTGTCGTTTACAATGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | TACACAGTGAAGGGTAGTGTTAGCCAAGTTGAGCGTACACCCCACAGAGAAACAGGCTCCCTGTGGTGGTaGTGCCTCCTCAGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTVKGSVSQVERTPHRETGSLWW*CLLRLS Trigger: GGACAGCCTGAGGAGGCACCACCACCACAGGGAGCC...TGTTTCTCTGTGGGGTGTACGCTCAACTTGGCTAACACTACCCTTCACTGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | TCTAACACATCCAGTGCCTCATGCACTGTCCTGTGTGTCTGCTTTCCAAGAACTCCTGGCTCCCTGTGGTaGTGGTGCCTCCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNTSSASCTVLCVCFPRTPGSLW*WCLLRL Trigger: CAGCCTGAGGAGGCACCACCACCACAGGGAGCCAGG...AGTTCTTGGAAAGCAGACACACAGGACAGTGCATGAGGCACTGGATGTGTTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GTGTATTGGACCAACCCTGAGCCCAGACATCGTGGGCTATGTCCTGTAAGGCACAATAGGCTTGTGTCCTaGCTCCCTGTGGTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VYWTNPEPRHRGLCPVRHNRLVS*LPVVVV Trigger: CACCACCACCACAGGGAGCCAGGACACAAGCCTATT...GTGCCTTACAGGACATAGCCCACGATGTCTGGGCTCAGGGTTGGTCCAATACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GGCATTCACCCATGTGATGTGAACCAGTTCCCACTGGTTTTGGGCTCTGCCACCGGCCCATTCCCCTCTTaGCTCGAACAAGTCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GIHPCDVNQFPLVLGSATGPFPS*LEQVMQ Trigger: CTGCATGACTTGTTCGAGCCAAGAGGGGAATGGGCC...GGTGGCAGAGCCCAAAACCAGTGGGAACTGGTTCACATCACATGGGTGAATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR TCA 90 bp | GGCATTCACCCATGTGATGTGAACCAGTTCCCACTGGTTTTGGGCTCTGCCACCCTAAGGGGACAGAGGTaGCTTGTGCAGGTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GIHPCDVNQFPLVLGSATLRGQR*LVQVKK Trigger: CTTCTTCACCTGCACAAGTCACCTCTGTCCCCTTAG...GGTGGCAGAGCCCAAAACCAGTGGGAACTGGTTCACATCACATGGGTGAATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | GGACCAAGCAGCTTGGTCCAGCATCAGACTATTCTTCCTCATCACACAGGGCCAAGGATCTCCTTCAGCTaGCGTACGGTCAGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPSSLVQHQTILPHHTGPRISFS*RTVRPS Trigger: TGAAGGCCTGACCGTACGGCAGCTGAAGGAGATCCT...TGGCCCTGTGTGATGAGGAAGAATAGTCTGATGCTGGACCAAGCTGCTTGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| CDS-3UTR GCA 90 bp | GCCCAGACATCGTGGGCTATGTCCTGTAAGGCACTGAAGAAACCAATGCTAGCCCCGGAAGACGTGCACTaGTCTGATCACATACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AQTSWAMSCKALKKPMLAPEDVH*SDHILP Trigger: CGGCAGTATGTGATCAGAGCAGTGCACGTCTTCCGG...GGCTAGCATTGGTTTCTTCAGTGCCTTACAGGACATAGCCCACGATGTCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | GGCATTCACCCATGTGATGTGAACCAGTTCCCACTGGTTTTGGGCTCTGCCACCCCTGTCTCAAAACACTaGCACAGCAGACAGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GIHPCDVNQFPLVLGSATPVSKH*HSRQWA Trigger: AGCCCACTGTCTGCTGTGGCAGTGTTTTGAGACAGG...GGTGGCAGAGCCCAAAACCAGTGGGAACTGGTTCACATCACATGGGTGAATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071152.14 |
||
| CDS-3UTR CCA 90 bp | TACACAGTGAAGGGTAGTGTTAGCCAAGTTGAGCGTACACCCCACAGAGAAACATGTCCTGGCTCCCTGTaGTGGTGGTGCCTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTVKGSVSQVERTPHRETCPGSL*WWCLLR Trigger: CCTGAGGAGGCACCACCACCACAGGGAGCCAGGACA...TGTTTCTCTGTGGGGTGTACGCTCAACTTGGCTAACACTACCCTTCACTGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GTGTATTGGACCAACCCTGAGCCCAGACATCGTGGGCTATGTCCTGTAAGGCACAGCTGTACCCAGGGTTaGAATAGGCTTGTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VYWTNPEPRHRGLCPVRHSCTQG*NRLVSW Trigger: CCAGGACACAAGCCTATTCCAACCCTGGGTACAGCT...GTGCCTTACAGGACATAGCCCACGATGTCTGGGCTCAGGGTTGGTCCAATACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | CCTCCCACACGGCTGGAAACGTGCCCTCTGTGGCCTTTGTTTACAATAGTGCCAAGCTGTACCCAGGGTTaGAATAGGCTTGTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPTRLETCPLWPLFTIVPSCTQG*NRLVSW Trigger: CCAGGACACAAGCCTATTCCAACCCTGGGTACAGCT...TGGCACTATTGTAAACAAAGGCCACAGAGGGCACGTTTCCAGCCGTGTGGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| CDS-3UTR CCA 90 bp | GGACCAAGCAGCTTGGTCCAGCATCAGACTATTCTTCCTCATCACACAGGGCCAGGCCCATTCCCCTCTTaGCTCGAACAAGTCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPSSLVQHQTILPHHTGPGPFPS*LEQVMQ Trigger: CTGCATGACTTGTTCGAGCCAAGAGGGGAATGGGCC...TGGCCCTGTGTGATGAGGAAGAATAGTCTGATGCTGGACCAAGCTGCTTGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| CDS-3UTR CCA 90 bp | TACACAGTGAAGGGTAGTGTTAGCCAAGTTGAGCGTACACCCCACAGAGAAACAATGAGCTCCTCCCGCTaGAAGGCCGTGGCTCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YTVKGSVSQVERTPHRETMSSSR*KAVARN Trigger: GTTCCGAGCCACGGCCTTCCAGCGGGAGGAGCTCAT...TGTTTCTCTGTGGGGTGTACGCTCAACTTGGCTAACACTACCCTTCACTGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GGCATTCACCCATGTGATGTGAACCAGTTCCCACTGGTTTTGGGCTCTGCCACCTGCGTTTGCCACACTTaGTACAGGTCACCATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GIHPCDVNQFPLVLGSATCVCHT*YRSPCG Trigger: GCCACATGGTGACCTGTACCAAGTGTGGCAAACGCA...GGTGGCAGAGCCCAAAACCAGTGGGAACTGGTTCACATCACATGGGTGAATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR CAA 72 bp | CTGGCCCTCGCCAGGAACTGTGGGAGACTGGTTTCCTaGTTTATGCTGTGCCACCTCTTGAGAATCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LALARNCGRLVS*FMLCHLLRILS Trigger: AGAGAGGATTCTCAAGAGGTGGCACAGCATAAACAAGGAAACCAGTCTCCCACAGTTCCTGGCGAGGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGTTCCCTGTGGTGGTGGTaGCTCCTCAGGCTGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GVGERPFLAELMIDRRSGSLWWW*LLRLSI Trigger: GATGGACAGCCTGAGGAGGCACCACCACCACAGGGA...ACCACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | GGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGACTGGTCTCCCTGTGGTGGTGGTaGCTCCTCAGGCTGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GGVVYRCMKWILGQERLVSLWWW*LLRLSI Trigger: GATGGACAGCCTGAGGAGGCACCACCACCACAGGGA...GACCAGTCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | CCAAAATCTGGTCATCTGGACTTCGAATGCAGAGGTAAGTGGGCCTGGCATCTCAGGATCTCCTTCAGCTaGCGTACGGTCAGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PKSGHLDFECRGKWAWHLRISFS*RTVRPS Trigger: TGAAGGCCTGACCGTACGGCAGCTGAAGGAGATCCT...GAGATGCCAGGCCCACTTACCTCTGCATTCGAAGTCCAGATGACCAGATTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS-3UTR CCA 90 bp | GTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGTGTACCTGGCTCCCTGTGGTaGTGGTGCCTCCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGERPFLAELMIDRRSGVPGSLW*WCLLRL Trigger: CAGCCTGAGGAGGCACCACCACCACAGGGAGCCAGG...TACACCACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GCCCAGACATCGTGGGCTATGTCCTGTAAGGCACTGAAGAAACCAATGCTAGCCAGCTGTACCCAGGGTTaGAATAGGCTTGTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AQTSWAMSCKALKKPMLASCTQG*NRLVSW Trigger: CCAGGACACAAGCCTATTCCAACCCTGGGTACAGCT...GGCTAGCATTGGTTTCTTCAGTGCCTTACAGGACATAGCCCACGATGTCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGTGAGAAGGCAGAGGCGTaGCCCATTCCCCTCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVGERPFLAELMIDRRSGEKAEA*PIPLLA Trigger: AGCCAAGAGGGGAATGGGCCACGCCTCTGCCTTCTC...ACCACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | ATGATCACAGATGCAGGCATTCACCCATGTGATGTGAACCAGTTCCCACTGGTTGAGAAGGCAGAGGCGTaGCCCATTCCCCTCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MITDAGIHPCDVNQFPLVEKAEA*PIPLLA Trigger: AGCCAAGAGGGGAATGGGCCACGCCTCTGCCTTCTC...AACCAGTGGGAACTGGTTCACATCACATGGGTGAATGCCTGCATCTGTGATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GGCATTCACCCATGTGATGTGAACCAGTTCCCACTGGTTTTGGGCTCTGCCACCTCTGAGTCAACGGACTaGGTCTCATCCTCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GIHPCDVNQFPLVLGSATSESTD*VSSSVG Trigger: ACCTACTGAGGATGAGACCCAGTCCGTTGACTCAGA...GGTGGCAGAGCCCAAAACCAGTGGGAACTGGTTCACATCACATGGGTGAATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| 3UTR CAA 72 bp | TGTTTAAGGTGTGCAGCGCACACCCTGGTTCAGAGGTaGTCCAGGAGGAGGCCTAGCTTACCAACTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLRCAAHTLVQR*SRRRPSLPTHV Trigger: AACATGAGTTGGTAAGCTAGGCCTCCTCCTGGACAACCTCTGAACCAGGGTGTGCGCTGCACACCTTAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| CDS-3UTR TCA 90 bp | CTCCACTTTTCCAAGTCAGTCATGAGTGAGTGGTTGGTTATTCCAGTCTCACATGGCACTGTGCTGGTTTaGGGCTGGGTCAGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHFSKSVMSEWLVIPVSHGTVLV*GWVRKA Trigger: GGCCTTCCTGACCCAGCCTCAAACCAGCACAGTGCC...ATGTGAGACTGGAATAACCAACCACTCACTCATGACTGACTTGGAAAAGTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGTGTATGTCCTGGCTCCCTGTaGTGGTGGTGCCTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGERPFLAELMIDRRSGVCPGSL*WWCLLR Trigger: CCTGAGGAGGCACCACCACCACAGGGAGCCAGGACA...TACACCACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | CCAAAATCTGGTCATCTGGACTTCGAATGCAGAGGTAAGTGGGCCTGGCATCTCAGCTGTACCCAGGGTTaGAATAGGCTTGTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKSGHLDFECRGKWAWHLSCTQG*NRLVSW Trigger: CCAGGACACAAGCCTATTCCAACCCTGGGTACAGCT...GAGATGCCAGGCCCACTTACCTCTGCATTCGAAGTCCAGATGACCAGATTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS-3UTR TCA 90 bp | ATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGGCACTGTGCTGGTTTaGGGCTGGGTCAGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MIDRRSGVQMYEMDLRTGGTVLV*GWVRKA Trigger: GGCCTTCCTGACCCAGCCTCAAACCAGCACAGTGCC...TCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS-3UTR TCA 90 bp | TTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGAAGAAGGGAGGCCAGGTaGGGTAGGAGGCACTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTGGVVYRCMKWILGQERRREAR*GRRHCA Trigger: AGCACAGTGCCTCCTACCTCACCTGGCCTCCCTTCT...TCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR TCA 90 bp | ACTTCGAATGCAGAGGTAAGTGGGCCTGGCATCTCTGACAACAGCTTCATGGAACTAAGGGGACAGAGGTaGCTTGTGCAGGTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSNAEVSGPGISDNSFMELRGQR*LVQVKK Trigger: CTTCTTCACCTGCACAAGTCACCTCTGTCCCCTTAG...TTCCATGAAGCTGTTGTCAGAGATGCCAGGCCCACTTACCTCTGCATTCGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR TCA 90 bp | ATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGCGAAGAAGCTGCGGCTaGGGTCGCTGGAGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: IDRRSGVQMYEMDLRTGERRSCG*GRWSHV Trigger: AACATGGCTCCAGCGACCTCAGCCGCAGCTTCTTCG...CTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071152.14 |
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| CDS-3UTR GCA 90 bp | GTGTATTGGACCAACCCTGAGCCCAGACATCGTGGGCTATGTCCTGTAAGGCACATTCGTTCATGCGTTTaGCACACTTGGTACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VYWTNPEPRHRGLCPVRHIRSCV*HTWYRS Trigger: TGACCTGTACCAAGTGTGGCAAACGCATGAACGAAT...GTGCCTTACAGGACATAGCCCACGATGTCTGGGCTCAGGGTTGGTCCAATACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGACTGGTCGGCCCATTCCCCTCTTaGCTCGAACAAGTCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGVVYRCMKWILGQERLVGPFPS*LEQVMQ Trigger: CTGCATGACTTGTTCGAGCCAAGAGGGGAATGGGCC...GACCAGTCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS-3UTR CCA 90 bp | TTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGAGAGAAGGCAGAGGCGTaGCCCATTCCCCTCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTGGVVYRCMKWILGQEREKAEA*PIPLLA Trigger: AGCCAAGAGGGGAATGGGCCACGCCTCTGCCTTCTC...TCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS-3UTR CCA 90 bp | TACACAGTGAAGGGTAGTGTTAGCCAAGTTGAGCGTACACCCCACAGAGAAACATCAATGTCCTCCAGGTaGGTCAGGTCAGACAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: YTVKGSVSQVERTPHRETSMSSR*VRSDSE Trigger: CTCGCTGTCTGACCTGACCCACCTGGAGGACATTGA...TGTTTCTCTGTGGGGTGTACGCTCAACTTGGCTAACACTACCCTTCACTGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS-3UTR TCA 90 bp | GGTGGGGTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTTGCTGGAGTCCTTTCTaGTCCTTGTACAGCCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGVGERPFLAELMIDRRSCWSPF*SLYSRV Trigger: GACTCGGCTGTACAAGGATCAGAAAGGACTCCAGCA...ACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCACCCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS-3UTR TCA 90 bp | GGGGTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGTTGCTGGAGTCCTTTCTaGTCCTTGTACAGCCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GVGERPFLAELMIDRRSGCWSPF*SLYSRV Trigger: GACTCGGCTGTACAAGGATCAGAAAGGACTCCAGCA...ACCACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS-3UTR GCA 90 bp | GGCATTCACCCATGTGATGTGAACCAGTTCCCACTGGTTTTGGGCTCTGCCACCCAATGGGTGAGTCCATaGAAATCTTACACAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GIHPCDVNQFPLVLGSATQWVSP*KSYTGS Trigger: AGAACCTGTGTAAGATTTGCATGGACTCACCCATTG...GGTGGCAGAGCCCAAAACCAGTGGGAACTGGTTCACATCACATGGGTGAATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS-3UTR GCA 90 bp | GGGGTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGTCAGGACCGGAAGACGTaGACTGCTCTGATCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: GVGERPFLAELMIDRRSGQDRKT*TALITY Trigger: GTATGTGATCAGAGCAGTGCACGTCTTCCGGTCCTG...ACCACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS-3UTR GCA 90 bp | TACACAGTGAAGGGTAGTGTTAGCCAAGTTGAGCGTACACCCCACAGAGAAACACAGGACCGGAAGACGTaGACTGCTCTGATCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: YTVKGSVSQVERTPHRETQDRKT*TALITY Trigger: GTATGTGATCAGAGCAGTGCACGTCTTCCGGTCCTG...TGTTTCTCTGTGGGGTGTACGCTCAACTTGGCTAACACTACCCTTCACTGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS-3UTR CCA 90 bp | TCACACAGGGCCAAAAGTTCAGCCCTTTGTCCCTTTAATGCCTTACTATATATTATGAGCTCCTCCCGCTaGAAGGCCGTGGCTCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SHRAKSSALCPFNALLYIMSSSR*KAVARN Trigger: GTTCCGAGCCACGGCCTTCCAGCGGGAGGAGCTCAT...AATATATAGTAAGGCATTAAAGGGACAAAGGGCTGAACTTTTGGCCCTGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
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| CDS-3UTR CCA 90 bp | GAACTTATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGATGAGCTCCTCCCGCTaGAAGGCCGTGGCTCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ELMIDRRSGVQMYEMDLRMSSSR*KAVARN Trigger: GTTCCGAGCCACGGCCTTCCAGCGGGAGGAGCTCAT...CCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCATAAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS-3UTR GCA 90 bp | GTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGTGTAAGGATCTCCTTCAGCTaGCGTACGGTCAGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VGERPFLAELMIDRRSGVRISFS*RTVRPS Trigger: TGAAGGCCTGACCGTACGGCAGCTGAAGGAGATCCT...TACACCACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS-3UTR GCA 90 bp | GACCCAAAATCTGGTCATCTGGACTTCGAATGCAGAGGTAAGTGGGCCTGGCATATTCGTTCATGCGTTTaGCACACTTGGTACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DPKSGHLDFECRGKWAWHIRSCV*HTWYRS Trigger: TGACCTGTACCAAGTGTGGCAAACGCATGAACGAAT...ATGCCAGGCCCACTTACCTCTGCATTCGAAGTCCAGATGACCAGATTTTGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | CCAAAATCTGGTCATCTGGACTTCGAATGCAGAGGTAAGTGGGCCTGGCATCTCATTCGTTCATGCGTTTaGCACACTTGGTACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PKSGHLDFECRGKWAWHLIRSCV*HTWYRS Trigger: TGACCTGTACCAAGTGTGGCAAACGCATGAACGAAT...GAGATGCCAGGCCCACTTACCTCTGCATTCGAAGTCCAGATGACCAGATTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS-3UTR GCA 90 bp | TTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGACCGGAAGACGTGCACTaGTCTGATCACATACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LTGGVVYRCMKWILGQERPEDVH*SDHILP Trigger: CGGCAGTATGTGATCAGAGCAGTGCACGTCTTCCGG...TCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS-3UTR CCA 90 bp | TTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGAAATAGGCTTGTGTCCTaGCTCCCTGTGGTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTGGVVYRCMKWILGQERNRLVS*LPVVVV Trigger: CACCACCACCACAGGGAGCCAGGACACAAGCCTATT...TCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | TTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGAGGCCCATTCCCCTCTTaGCTCGAACAAGTCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTGGVVYRCMKWILGQERGPFPS*LEQVMQ Trigger: CTGCATGACTTGTTCGAGCCAAGAGGGGAATGGGCC...TCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | CCAAAGTTAAGGATGATACAAAGTCAAACCCAAAGAGAAACAGCACCATCTCTGGAGAAGGCAGAGGCGTaGCCCATTCCCCTCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKLRMIQSQTQRETAPSLEKAEA*PIPLLA Trigger: AGCCAAGAGGGGAATGGGCCACGCCTCTGCCTTCTC...CAGAGATGGTGCTGTTTCTCTTTGGGTTTGACTTTGTATCATCCTTAACTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | CTTATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGAGAAGGCAGAGGCGTaGCCCATTCCCCTCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LMIDRRSGVQMYEMDLRTEKAEA*PIPLLA Trigger: AGCCAAGAGGGGAATGGGCCACGCCTCTGCCTTCTC...TGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | TTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGATCAATGTCCTCCAGGTaGGTCAGGTCAGACAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTGGVVYRCMKWILGQERSMSSR*VRSDSE Trigger: CTCGCTGTCTGACCTGACCCACCTGGAGGACATTGA...TCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GAAAGCAGTTATGAGGGAGAGCCAGCCGGCTTTAATGTTATTCTTAGGTCTTACTCAATGTCCTCCAGGTaGGTCAGGTCAGACAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ESSYEGEPAGFNVILRSYSMSSR*VRSDSE Trigger: CTCGCTGTCTGACCTGACCCACCTGGAGGACATTGA...GTAAGACCTAAGAATAACATTAAAGCCGGCTGGCTCTCCCTCATAACTGCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | TGTGAACCAGTTCCCACTGGTTTTGGGCTCTGCCACCTAAAACAAGCATGCCAGGCAGAACACAGTCAATaGGTGAGTCCATGCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: CEPVPTGFGLCHLKQACQAEHSQ*VSPCKS Trigger: AGATTTGCATGGACTCACCCATTGACTGTGTTCTGC...CTGGCATGCTTGTTTTAGGTGGCAGAGCCCAAAACCAGTGGGAACTGGTTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GACCCAAAATCTGGTCATCTGGACTTCGAATGCAGAGGTAAGTGGGCCTGGCATGCAGAACACAGTCAATaGGTGAGTCCATGCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: DPKSGHLDFECRGKWAWHAEHSQ*VSPCKS Trigger: AGATTTGCATGGACTCACCCATTGACTGTGTTCTGC...ATGCCAGGCCCACTTACCTCTGCATTCGAAGTCCAGATGACCAGATTTTGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGACTGGTTGCGTTTGCCACACTTaGTACAGGTCACCATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRSGVQMYEMDLRTGETGCVCHT*YRSPCG Trigger: GCCACATGGTGACCTGTACCAAGTGTGGCAAACGCA...ACCAGTCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR TCA 90 bp | TTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGACTAAGGGGACAGAGGTaGCTTGTGCAGGTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTGGVVYRCMKWILGQERLRGQR*LVQVKK Trigger: CTTCTTCACCTGCACAAGTCACCTCTGTCCCCTTAG...TCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR TCA 90 bp | ATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGCTAAGGGGACAGAGGTaGCTTGTGCAGGTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IDRRSGVQMYEMDLRTGELRGQR*LVQVKK Trigger: CTTCTTCACCTGCACAAGTCACCTCTGTCCCCTTAG...CTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR TCA 90 bp | ATGAGGACCAGAAGACAAAGACAAAGCCGCTGCCTTGATTTCTCTTTCCTCATATGCTGGAGTCCTTTCTaGTCCTTGTACAGCCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MRTRRQRQSRCLDFSFLICWSPF*SLYSRV Trigger: GACTCGGCTGTACAAGGATCAGAAAGGACTCCAGCA...TATGAGGAAAGAGAAATCAAGGCAGCGGCTTTGTCTTTGTCTTCTGGTCCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR TCA 90 bp | GTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGTGTATGCTGGAGTCCTTTCTaGTCCTTGTACAGCCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGERPFLAELMIDRRSGVCWSPF*SLYSRV Trigger: GACTCGGCTGTACAAGGATCAGAAAGGACTCCAGCA...TACACCACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR TCA 90 bp | CCAGTGCCTCATGCACTGTCCTGTGTGTCTGCTTTCCAAGAACTCCATGTACAGAACACAGTCAATGGGTaGGTCCATGCAAATCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: PVPHALSCVSAFQELHVQNTVNG*VHANLT Trigger: TGTAAGATTTGCATGGACTCACCCATTGACTGTGTT...CTGTACATGGAGTTCTTGGAAAGCAGACACACAGGACAGTGCATGAGGCACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | CTTATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACATCTGCTTCCGGGTTGTaGTTGCGAAATGGACCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LMIDRRSGVQMYEMDLRTSASGL*LRNGPR Trigger: GCGGGGTCCATTTCGCAAGCACAACCCGGAAGCAGA...TGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | CCAAAATCTGGTCATCTGGACTTCGAATGCAGAGGTAAGTGGGCCTGGCATCTCCAATGGGTGAGTCCATaGAAATCTTACACAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKSGHLDFECRGKWAWHLQWVSP*KSYTGS Trigger: AGAACCTGTGTAAGATTTGCATGGACTCACCCATTG...GAGATGCCAGGCCCACTTACCTCTGCATTCGAAGTCCAGATGACCAGATTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | CTCCACTTTTCCAAGTCAGTCATGAGTGAGTGGTTGGTTATTCCAGTCTCACATCAGGACCGGAAGACGTaGACTGCTCTGATCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: LHFSKSVMSEWLVIPVSHQDRKT*TALITY Trigger: GTATGTGATCAGAGCAGTGCACGTCTTCCGGTCCTG...ATGTGAGACTGGAATAACCAACCACTCACTCATGACTGACTTGGAAAAGTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | ATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAAATAGGCTTGTGTCCTaGCTCCCTGTGGTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MIDRRSGVQMYEMDLRTGNRLVS*LPVVVV Trigger: CACCACCACCACAGGGAGCCAGGACACAAGCCTATT...TCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GAAAGCAGTTATGAGGGAGAGCCAGCCGGCTTTAATGTTATTCTTAGGTCTTACTGCGTTTGCCACACTTaGTACAGGTCACCATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ESSYEGEPAGFNVILRSYCVCHT*YRSPCG Trigger: GCCACATGGTGACCTGTACCAAGTGTGGCAAACGCA...GTAAGACCTAAGAATAACATTAAAGCCGGCTGGCTCTCCCTCATAACTGCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR TCA 90 bp | TTTAGGCAAATGAGAAGACTTAAAAGATACATTAACACACAGAAAGCCAGAGAGGGCACTGTGCTGGTTTaGGGCTGGGTCAGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FRQMRRLKRYINTQKAREGTVLV*GWVRKA Trigger: GGCCTTCCTGACCCAGCCTCAAACCAGCACAGTGCC...CTCTCTGGCTTTCTGTGTGTTAATGTATCTTTTAAGTCTTCTCATTTGCCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR TCA 90 bp | ATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGACTAAGGGGACAGAGGTaGCTTGTGCAGGTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MIDRRSGVQMYEMDLRTGLRGQR*LVQVKK Trigger: CTTCTTCACCTGCACAAGTCACCTCTGTCCCCTTAG...TCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR TCA 90 bp | ATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGATGCTGGAGTCCTTTCTaGTCCTTGTACAGCCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MIDRRSGVQMYEMDLRTGCWSPF*SLYSRV Trigger: GACTCGGCTGTACAAGGATCAGAAAGGACTCCAGCA...TCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | CCAAAATCTGGTCATCTGGACTTCGAATGCAGAGGTAAGTGGGCCTGGCATCTCGGCTCGAACAAGTCATaGAGAAGTTTTTCTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PKSGHLDFECRGKWAWHLGSNKS*RSFSYS Trigger: ACTGTAAGAAAAACTTCTGCATGACTTGTTCGAGCC...GAGATGCCAGGCCCACTTACCTCTGCATTCGAAGTCCAGATGACCAGATTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | TGTGAACCAGTTCCCACTGGTTTTGGGCTCTGCCACCTAAAACAAGCATGCCAGGGCTCGAACAAGTCATaGAGAAGTTTTTCTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CEPVPTGFGLCHLKQACQGSNKS*RSFSYS Trigger: ACTGTAAGAAAAACTTCTGCATGACTTGTTCGAGCC...CTGGCATGCTTGTTTTAGGTGGCAGAGCCCAAAACCAGTGGGAACTGGTTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | CTTATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAAGGATCTCCTTCAGCTaGCGTACGGTCAGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LMIDRRSGVQMYEMDLRTRISFS*RTVRPS Trigger: TGAAGGCCTGACCGTACGGCAGCTGAAGGAGATCCT...TGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | ATGATCACAGATGCAGGCATTCACCCATGTGATGTGAACCAGTTCCCACTGGTTATTCGTTCATGCGTTTaGCACACTTGGTACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MITDAGIHPCDVNQFPLVIRSCV*HTWYRS Trigger: TGACCTGTACCAAGTGTGGCAAACGCATGAACGAAT...AACCAGTGGGAACTGGTTCACATCACATGGGTGAATGCCTGCATCTGTGATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | AGCTCTTCTGATAGTATATTTTGTGCTTTGTTGAGCTGTTCTCAGCTGTGTCAGCCGGAAGACGTGCACTaGTCTGATCACATACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSSDSIFCALLSCSQLCQPEDVH*SDHILP Trigger: CGGCAGTATGTGATCAGAGCAGTGCACGTCTTCCGG...CTGACACAGCTGAGAACAGCTCAACAAAGCACAAAATATACTATCAGAAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | CCAAAGTTAAGGATGATACAAAGTCAAACCCAAAGAGAAACAGCACCATCTCTGCCGGAAGACGTGCACTaGTCTGATCACATACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PKLRMIQSQTQRETAPSLPEDVH*SDHILP Trigger: CGGCAGTATGTGATCAGAGCAGTGCACGTCTTCCGG...CAGAGATGGTGCTGTTTCTCTTTGGGTTTGACTTTGTATCATCCTTAACTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGGCAAATGAGAAGACTTAAAAGATACATTAACACACAGAAAGCCAGAGAGTGTCCTGGCTCCCTGTaGTGGTGGTGCCTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRQMRRLKRYINTQKARECPGSL*WWCLLR Trigger: CCTGAGGAGGCACCACCACCACAGGGAGCCAGGACA...CTCTCTGGCTTTCTGTGTGTTAATGTATCTTTTAAGTCTTCTCATTTGCCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | AGCTCTTCTGATAGTATATTTTGTGCTTTGTTGAGCTGTTCTCAGCTGTGTCAGAATAGGCTTGTGTCCTaGCTCCCTGTGGTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSDSIFCALLSCSQLCQNRLVS*LPVVVV Trigger: CACCACCACCACAGGGAGCCAGGACACAAGCCTATT...CTGACACAGCTGAGAACAGCTCAACAAAGCACAAAATATACTATCAGAAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GAACTTATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGAATAGGCTTGTGTCCTaGCTCCCTGTGGTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ELMIDRRSGVQMYEMDLRNRLVS*LPVVVV Trigger: CACCACCACCACAGGGAGCCAGGACACAAGCCTATT...CCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCATAAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | ATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAAGCTGTACCCAGGGTTaGAATAGGCTTGTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MIDRRSGVQMYEMDLRTGSCTQG*NRLVSW Trigger: CCAGGACACAAGCCTATTCCAACCCTGGGTACAGCT...TCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GAACTTATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGGGCCCATTCCCCTCTTaGCTCGAACAAGTCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELMIDRRSGVQMYEMDLRGPFPS*LEQVMQ Trigger: CTGCATGACTTGTTCGAGCCAAGAGGGGAATGGGCC...CCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCATAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GAACTTATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGTCAATGTCCTCCAGGTaGGTCAGGTCAGACAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELMIDRRSGVQMYEMDLRSMSSR*VRSDSE Trigger: CTCGCTGTCTGACCTGACCCACCTGGAGGACATTGA...CCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCATAAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GGTGGGGTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGCAGAACACAGTCAATaGGTGAGTCCATGCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GGVGERPFLAELMIDRRSAEHSQ*VSPCKS Trigger: AGATTTGCATGGACTCACCCATTGACTGTGTTCTGC...ACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCACCCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | CTCCACTTTTCCAAGTCAGTCATGAGTGAGTGGTTGGTTATTCCAGTCTCACATTCTGAGTCAACGGACTaGGTCTCATCCTCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHFSKSVMSEWLVIPVSHSESTD*VSSSVG Trigger: ACCTACTGAGGATGAGACCCAGTCCGTTGACTCAGA...ATGTGAGACTGGAATAACCAACCACTCACTCATGACTGACTTGGAAAAGTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR CAA 72 bp | GTGGAGGGATCTGAATCCCTGACATCCACAAAAGCTTaGACCCAAAATCTGGTCATCTGGACTTCGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: VEGSESLTSTKA*TQNLVIWTSNA Trigger: TGCATTCGAAGTCCAGATGACCAGATTTTGGGTCAAAGCTTTTGTGGATGTCAGGGATTCAGATCCCTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR CAA 72 bp | TTTAACTCTAGTCTCAAGCAGAAGCTGCTTTGCGCTTaGAACACTTGGACCAAGCAGCTTGGTCCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FNSSLKQKLLCA*NTWTKQLGPAS Trigger: TGATGCTGGACCAAGCTGCTTGGTCCAAGTGTTCAAAGCGCAAAGCAGCTTCTGCTTGAGACTAGAGTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| CDS-3UTR TCA 90 bp | GGTGGGGTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTAACACAGTCAATGGGTaGGTCCATGCAAATCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: GGVGERPFLAELMIDRRSNTVNG*VHANLT Trigger: TGTAAGATTTGCATGGACTCACCCATTGACTGTGTT...ACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCACCCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | GAAAATCTTAATGTAAGCCACTTGGAGCTACACATTTACATCCGAGAGATCTCAAGGATCTCCTTCAGCTaGCGTACGGTCAGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ENLNVSHLELHIYIREISRISFS*RTVRPS Trigger: TGAAGGCCTGACCGTACGGCAGCTGAAGGAGATCCT...TGAGATCTCTCGGATGTAAATGTGTAGCTCCAAGTGGCTTACATTAAGATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | CCAAAGTTAAGGATGATACAAAGTCAAACCCAAAGAGAAACAGCACCATCTCTGCAGGACCGGAAGACGTaGACTGCTCTGATCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: PKLRMIQSQTQRETAPSLQDRKT*TALITY Trigger: GTATGTGATCAGAGCAGTGCACGTCTTCCGGTCCTG...CAGAGATGGTGCTGTTTCTCTTTGGGTTTGACTTTGTATCATCCTTAACTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR CAA 72 bp | TCCCTCCACTTTTCCAAGTCAGTCATGAGTGAGTGGTaGGTTATTCCAGTCTCACATAGCTACACAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLHFSKSVMSEW*VIPVSHSYTVK Trigger: CTTCACTGTGTAGCTATGTGAGACTGGAATAACCAACCACTCACTCATGACTGACTTGGAAAAGTGGAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGTGGCTCGAACAAGTCATaGAGAAGTTTTTCTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVGERPFLAELMIDRRSGGSNKS*RSFSYS Trigger: ACTGTAAGAAAAACTTCTGCATGACTTGTTCGAGCC...ACCACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCACCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | AGTCATAGTCTAACACATCCAGTGCCTCATGCACTGTCCTGTGTGTCTGCTTTCGGCTCGAACAAGTCATaGAGAAGTTTTTCTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SHSLTHPVPHALSCVSAFGSNKS*RSFSYS Trigger: ACTGTAAGAAAAACTTCTGCATGACTTGTTCGAGCC...GAAAGCAGACACACAGGACAGTGCATGAGGCACTGGATGTGTTAGACTATGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | AGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGACTGGTCAATGGGTGAGTCCATaGAAATCTTACACAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRSGVQMYEMDLRTGETGQWVSP*KSYTGS Trigger: AGAACCTGTGTAAGATTTGCATGGACTCACCCATTG...ACCAGTCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | CTCCACTTTTCCAAGTCAGTCATGAGTGAGTGGTTGGTTATTCCAGTCTCACATATTCGTTCATGCGTTTaGCACACTTGGTACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHFSKSVMSEWLVIPVSHIRSCV*HTWYRS Trigger: TGACCTGTACCAAGTGTGGCAAACGCATGAACGAAT...ATGTGAGACTGGAATAACCAACCACTCACTCATGACTGACTTGGAAAAGTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTGGTGTAGCAGAACACAGTCAATaGGTGAGTCCATGCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: VGERPFLAELMIDRRSGVAEHSQ*VSPCKS Trigger: AGATTTGCATGGACTCACCCATTGACTGTGTTCTGC...TACACCACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR CAA 72 bp | TTACTCTGTAGTCTGCTCTTTAGGCTGGGCCAACCTTaGAGACACACTTGTCTGTATTCAAAAGCTACCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLCSLLFRLGQP*RHTCLYSKATY Trigger: GTAGGTAGCTTTTGAATACAGACAAGTGTGTCTCAAAGGTTGGCCCAGCCTAAAGAGCAGACTACAGAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| 3UTR CAA 72 bp | ACTCCTAAAGTAAGATCCCATCAGGCGGTTGCTTACTaGTCTGGCTCTATCTTTCACCTGCTCTTTAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: TPKVRSHQAVAY*SGSIFHLLFKT Trigger: TGTCTTAAAGAGCAGGTGAAAGATAGAGCCAGACAAGTAAGCAACCGCCTGATGGGATCTTACTTTAGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074515.11 |
||
| CDS-3UTR TCA 90 bp | TTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGAAACACAGTCAATGGGTaGGTCCATGCAAATCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: LTGGVVYRCMKWILGQERNTVNG*VHANLT Trigger: TGTAAGATTTGCATGGACTCACCCATTGACTGTGTT...TCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR TCA 90 bp | ATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGAACACAGTCAATGGGTaGGTCCATGCAAATCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: IDRRSGVQMYEMDLRTGENTVNG*VHANLT Trigger: TGTAAGATTTGCATGGACTCACCCATTGACTGTGTT...CTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | GAAAATCTTAATGTAAGCCACTTGGAGCTACACATTTACATCCGAGAGATCTCACCAGTTGCAGCAGGATaGCCACATGATAAAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ENLNVSHLELHIYIREISPVAAG*PHDKIC Trigger: GCAGATTTTATCATGTGGGCATCCTGCTGCAACTGG...TGAGATCTCTCGGATGTAAATGTGTAGCTCCAAGTGGCTTACATTAAGATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071152.14 |
||
| 3UTR CAA 72 bp | CAAATTAAATGGCATGGGTTCTGGTTGTTACTTGGGTaGCTAACCACAGCCATCAGTGTATTTTCTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QIKWHGFWLLLG*LTTAISVFSVP Trigger: AGGAACAGAAAATACACTGATGGCTGTGGTTAGCAACCCAAGTAACAACCAGAACCCATGCCATTTAATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR GCA 90 bp | CCAAAGTTAAGGATGATACAAAGTCAAACCCAAAGAGAAACAGCACCATCTCTGCAATGGGTGAGTCCATaGAAATCTTACACAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKLRMIQSQTQRETAPSLQWVSP*KSYTGS Trigger: AGAACCTGTGTAAGATTTGCATGGACTCACCCATTG...CAGAGATGGTGCTGTTTCTCTTTGGGTTTGACTTTGTATCATCCTTAACTTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGGCAAATGAGAAGACTTAAAAGATACATTAACACACAGAAAGCCAGAGAGTCTGAGTCAACGGACTaGGTCTCATCCTCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FRQMRRLKRYINTQKARESESTD*VSSSVG Trigger: ACCTACTGAGGATGAGACCCAGTCCGTTGACTCAGA...CTCTCTGGCTTTCTGTGTGTTAATGTATCTTTTAAGTCTTCTCATTTGCCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| 3UTR CAA 72 bp | GAAACACACAGCTCTTCTGATAGTATATTTTGTGCTTaGTTGAGCTGTTCTCAGCTGTGTCAGTGGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ETHSSSDSIFCA*LSCSQLCQWCK Trigger: TTTACACCACTGACACAGCTGAGAACAGCTCAACAAAGCACAAAATATACTATCAGAAGAGCTGTGTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS GCA 90 bp | GGCAAGTGGGGAACACGAGTCCTGTCCGCCTCAGAAATTACAGGCTaGTGGCCAAGCACCAGGAACACCAGCTCCTCTTTCTCCCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GKWGTRVLSASEITG*WPSTRNTSSSFSRH Trigger: GTGCCGGGAGAAAGAGGAGCTGGTGTTCCTGGTGCTTGGCCAGCAGCCTGTAATTTCTGAGGCGGACAGGACTCGTGTTCCCCACTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000103218.3 ENSMUST00000108173.10 |
||
| CDS CCA 90 bp | TTCTTACAGTCCAAGCAGGTCTGCTTCCGGGTTGTGCTTGCGAAATaGACCCCGCAGGCCTTGCAGCTAGGTTCCGAGCCTGTGGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FLQSKQVCFRVVLAK*TPQALQLGSEPVGE Trigger: TTCCCCCACAGGCTCGGAACCTAGCTGCAAGGCCTGCGGGGTCCATTTCGCAAGCACAACCCGGAAGCAGACCTGCTTGGACTGTAAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000103218.3 ENSMUST00000108173.10 ENSMUST00000126660.2 |
||
| CDS GCA 90 bp | TCTGCTTTTGCCTGTCTCAAAACACTGCCACAGCAGACAGTGGGCTaGCCGAAGAAGCTGCGGCTGAGGTCGCTGGAGCCATGTTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SAFACLKTLPQQTVG*PKKLRLRSLEPCSD Trigger: ATCCGAACATGGCTCCAGCGACCTCAGCCGCAGCTTCTTCGGGCAGCCCACTGTCTGCTGTGGCAGTGTTTTGAGACAGGCAAAAGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071152.14 ENSMUST00000126660.2 |
||
| CDS-3UTR CAA 90 bp | GACCCAAAATCTGGTCATCTGGACTTCGAATGCAGAGGTAAGTGGGCCTGGCATAGGCACTGTGCTGGTTaGAGGCTGGGTCAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DPKSGHLDFECRGKWAWHRHCAG*RLGQEG Trigger: GCCTTCCTGACCCAGCCTCAAACCAGCACAGTGCCT...ATGCCAGGCCCACTTACCTCTGCATTCGAAGTCCAGATGACCAGATTTTGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CAA 90 bp | CCAAAATCTGGTCATCTGGACTTCGAATGCAGAGGTAAGTGGGCCTGGCATCTCAGGCACTGTGCTGGTTaGAGGCTGGGTCAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PKSGHLDFECRGKWAWHLRHCAG*RLGQEG Trigger: GCCTTCCTGACCCAGCCTCAAACCAGCACAGTGCCT...GAGATGCCAGGCCCACTTACCTCTGCATTCGAAGTCCAGATGACCAGATTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS GCA 90 bp | GTCCATGCAAATCTTACACAGGTTCTCCTCCAGGCCAGAAGGCACTaGTCCCCCGTTTTGGTCTTCATTACCAGACACCAGGTGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VHANLTQVLLQARRH*SPVLVFITRHQVLE Trigger: CTCCAGCACCTGGTGTCTGGTAATGAAGACCAAAACGGGGGAGCAGTGCCTTCTGGCCTGGAGGAGAACCTGTGTAAGATTTGCATGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS TCA 90 bp | CCGTTTTGGTCTTCATTACCAGACACCAGGTGCTGGAGTCCTTTCTaGTCCTTGTACAGCCGAGTCACCCTCTCCATCAGCTCCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PFWSSLPDTRCWSPF*SLYSRVTLSISSHF Trigger: GAAGTGGGAGCTGATGGAGAGGGTGACTCGGCTGTACAAGGATCAGAAAGGACTCCAGCACCTGGTGTCTGGTAATGAAGACCAAAACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS TCA 90 bp | GCGTTTTGGTCTTCATTACCAGACACCAGGTGCTGGAGTCCTTTCTaGTCCTTGTACAGCCGAGTCACCCTCTCCATCAGCTCCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: AFWSSLPDTRCWSPF*SLYSRVTLSISSHF Trigger: GAAGTGGGAGCTGATGGAGAGGGTGACTCGGCTGTACAAGGATCAGAAAGGACTCCAGCACCTGGTGTCTGGTAATGAAGACCAAAACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103218.3 |
||
| CDS GCA 90 bp | CTCGAACAAGTCATGCAGAAGTTTTTCTTACAGTCCAAGCAGGTCTaGTTCCGGGTTGTGCTTGCGAAATGGACCCCGCAGGCCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LEQVMQKFFLQSKQV*FRVVLAKWTPQALQ Trigger: CTGCAAGGCCTGCGGGGTCCATTTCGCAAGCACAACCCGGAAGCAGACCTGCTTGGACTGTAAGAAAAACTTCTGCATGACTTGTTCGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000103218.3 ENSMUST00000108173.10 ENSMUST00000126660.2 |
||
| CDS-3UTR CAA 90 bp | TGTGAACCAGTTCCCACTGGTTTTGGGCTCTGCCACCTAAAACAAGCATGCCAGTGGCCCATTCCCCTCTaGGCTCGAACAAGTCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: CEPVPTGFGLCHLKQACQWPIPL*ARTSHA Trigger: TGCATGACTTGTTCGAGCCAAGAGGGGAATGGGCCA...CTGGCATGCTTGTTTTAGGTGGCAGAGCCCAAAACCAGTGGGAACTGGTTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CAA 90 bp | CCAGTGCCTCATGCACTGTCCTGTGTGTCTGCTTTCCAAGAACTCCATGTACAGTGGCCCATTCCCCTCTaGGCTCGAACAAGTCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: PVPHALSCVSAFQELHVQWPIPL*ARTSHA Trigger: TGCATGACTTGTTCGAGCCAAGAGGGGAATGGGCCA...CTGTACATGGAGTTCTTGGAAAGCAGACACACAGGACAGTGCATGAGGCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CAA 90 bp | CCAAAATCTGGTCATCTGGACTTCGAATGCAGAGGTAAGTGGGCCTGGCATCTCTGGCCCATTCCCCTCTaGGCTCGAACAAGTCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: PKSGHLDFECRGKWAWHLWPIPL*ARTSHA Trigger: TGCATGACTTGTTCGAGCCAAGAGGGGAATGGGCCA...GAGATGCCAGGCCCACTTACCTCTGCATTCGAAGTCCAGATGACCAGATTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CAA 90 bp | GGTGGGGTGGGAGAAAGACCATTTCTAGCAGAACTTATGATTGACAGGAGGAGTAGGCACTGTGCTGGTTaGAGGCTGGGTCAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGVGERPFLAELMIDRRSRHCAG*RLGQEG Trigger: GCCTTCCTGACCCAGCCTCAAACCAGCACAGTGCCT...ACTCCTCCTGTCAATCATAAGTTCTGCTAGAAATGGTCTTTCTCCCACCCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CAA 90 bp | GTGTATTGGACCAACCCTGAGCCCAGACATCGTGGGCTATGTCCTGTAAGGCACCATTCGTTCATGCGTTaGCCACACTTGGTACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VYWTNPEPRHRGLCPVRHHSFMR*PHLVQV Trigger: GACCTGTACCAAGTGTGGCAAACGCATGAACGAATG...GTGCCTTACAGGACATAGCCCACGATGTCTGGGCTCAGGGTTGGTCCAATACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CAA 90 bp | TCTAACACATCCAGTGCCTCATGCACTGTCCTGTGTGTCTGCTTTCCAAGAACTTGGCCCATTCCCCTCTaGGCTCGAACAAGTCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: SNTSSASCTVLCVCFPRTWPIPL*ARTSHA Trigger: TGCATGACTTGTTCGAGCCAAGAGGGGAATGGGCCA...AGTTCTTGGAAAGCAGACACACAGGACAGTGCATGAGGCACTGGATGTGTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CAA 90 bp | TACACAGTGAAGGGTAGTGTTAGCCAAGTTGAGCGTACACCCCACAGAGAAACATGGCCCATTCCCCTCTaGGCTCGAACAAGTCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: YTVKGSVSQVERTPHRETWPIPL*ARTSHA Trigger: TGCATGACTTGTTCGAGCCAAGAGGGGAATGGGCCA...TGTTTCTCTGTGGGGTGTACGCTCAACTTGGCTAACACTACCCTTCACTGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CAA 90 bp | ATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGAGGCACTGTGCTGGTTaGAGGCTGGGTCAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IDRRSGVQMYEMDLRTGERHCAG*RLGQEG Trigger: GCCTTCCTGACCCAGCCTCAAACCAGCACAGTGCCT...CTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CAA 90 bp | CTTATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAAGGCACTGTGCTGGTTaGAGGCTGGGTCAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LMIDRRSGVQMYEMDLRTRHCAG*RLGQEG Trigger: GCCTTCCTGACCCAGCCTCAAACCAGCACAGTGCCT...TGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CAA 90 bp | TCTAACACATCCAGTGCCTCATGCACTGTCCTGTGTGTCTGCTTTCCAAGAACTCATTCGTTCATGCGTTaGCCACACTTGGTACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SNTSSASCTVLCVCFPRTHSFMR*PHLVQV Trigger: GACCTGTACCAAGTGTGGCAAACGCATGAACGAATG...AGTTCTTGGAAAGCAGACACACAGGACAGTGCATGAGGCACTGGATGTGTTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CAA 90 bp | AGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGACTGGTCATTCGTTCATGCGTTaGCCACACTTGGTACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RRSGVQMYEMDLRTGETGHSFMR*PHLVQV Trigger: GACCTGTACCAAGTGTGGCAAACGCATGAACGAATG...ACCAGTCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CAA 90 bp | ATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGAGAGCATTCGTTCATGCGTTaGCCACACTTGGTACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IDRRSGVQMYEMDLRTGEHSFMR*PHLVQV Trigger: GACCTGTACCAAGTGTGGCAAACGCATGAACGAATG...CTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS-3UTR CAA 90 bp | ATGATTGACAGGAGGAGTGGTGTACAGATGTATGAAATGGATCTTAGGACAGGACATTCGTTCATGCGTTaGCCACACTTGGTACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MIDRRSGVQMYEMDLRTGHSFMR*PHLVQV Trigger: GACCTGTACCAAGTGTGGCAAACGCATGAACGAATG...TCCTGTCCTAAGATCCATTTCATACATCTGTACACCACTCCTCCTGTCAATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS TCA 72 bp | GGGAGGCCAGGTGAGGTAGGAGGCACTGTGCTGGTTTaGGGCTGGGTCAGGAAGGCCTGCTGCTCAGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GRPGEVGGTVLV*GWVRKACCSGK Trigger: CTTCCCTGAGCAGCAGGCCTTCCTGACCCAGCCTCAAACCAGCACAGTGCCTCCTACCTCACCTGGCCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000103218.3 ENSMUST00000108173.10 |
||
| CDS TCA 72 bp | CAGCGAGGCCCTCCGGCCTGGGACGAAGCTGTCCTCTaGGTCAACGGACTGCTGAGTTTCCTGATCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QRGPPAWDEAVL*VNGLLSFLILG Trigger: GCCCAGGATCAGGAAACTCAGCAGTCCGTTGACTCAGAGGACAGCTTCGTCCCAGGCCGGAGGGCCTCGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021036.13 ENSMUST00000103218.3 |
||
| CDS CAA 90 bp | CAGGTCTGCTTCCGGGTTGTGCTTGCGAAATGGACCCCGCAGGCCTaGCAGCTAGGTTCCGAGCCTGTGGGGGAAGGGAAGGAGCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: QVCFRVVLAKWTPQA*QLGSEPVGEGKELY Trigger: GTACAGCTCCTTCCCTTCCCCCACAGGCTCGGAACCTAGCTGCAAGGCCTGCGGGGTCCATTTCGCAAGCACAACCCGGAAGCAGACCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000103218.3 ENSMUST00000108173.10 ENSMUST00000126660.2 |
||
| CDS TCA 72 bp | CAGCGAGGCCCTCCGGCCTGGGACGAAGCTGTCCTCTaGGTCAACGGACTGGGTCTCATCCTCAGTAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: QRGPPAWDEAVL*VNGLGLILSRY Trigger: GTACCTACTGAGGATGAGACCCAGTCCGTTGACTCAGAGGACAGCTTCGTCCCAGGCCGGAGGGCCTCGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
||
| CDS GCA 72 bp | GCCTGTCTCAAAACACTGCCACAGCAGACAGTGGGCTaGCCGAAGAAGCTGCGGCTGAGGTCGCTGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ACLKTLPQQTVG*PKKLRLRSLEP Trigger: TGGCTCCAGCGACCTCAGCCGCAGCTTCTTCGGGCAGCCCACTGTCTGCTGTGGCAGTGTTTTGAGACAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071152.14 ENSMUST00000126660.2 |
||
| CDS CAA 72 bp | GGAAGGGAAGGAGCTGTACCCAGGGTTGGAATAGGCTaGTGTCCTGGCTCCCTGTGGTGGTGGTGCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GREGAVPRVGIG*CPGSLWWWCLL Trigger: GAGGAGGCACCACCACCACAGGGAGCCAGGACACAAGCCTATTCCAACCCTGGGTACAGCTCCTTCCCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000103218.3 ENSMUST00000108173.10 ENSMUST00000126660.2 |
||
| CDS CCA 72 bp | AGGTCCTTCACCTTCATCTTCATGAGCTCCTCCCGCTaGAAGGCCGTGGCTCGGAACCGTAGGCAGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSFTFIFMSSSR*KAVARNRRQRR Trigger: CCTTCTCTGCCTACGGTTCCGAGCCACGGCCTTCCAGCGGGAGGAGCTCATGAAGATGAAGGTGAAGGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000103218.3 ENSMUST00000108173.10 |
||
| CDS GCA 72 bp | CTTACAGTCCAAGCAGGTCTGCTTCCGGGTTGTGCTTaGGAAATGGACCCCGCAGGCCTTGCAGCTAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LTVQAGLLPGCA*EMDPAGLAARF Trigger: GAACCTAGCTGCAAGGCCTGCGGGGTCCATTTCGCAAGCACAACCCGGAAGCAGACCTGCTTGGACTGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000103218.3 ENSMUST00000108173.10 ENSMUST00000126660.2 |
||
| CDS GCA 72 bp | GGAACACGAGTCCTGTCCGCCTCAGAAATTACAGGCTaGTGGCCAAGCACCAGGAACACCAGCTCCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GTRVLSASEITG*WPSTRNTSSSF Trigger: GAAAGAGGAGCTGGTGTTCCTGGTGCTTGGCCAGCAGCCTGTAATTTCTGAGGCGGACAGGACTCGTGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000103218.3 ENSMUST00000108173.10 |
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| CDS CAA 72 bp | AGTTTTTCTTACAGTCCAAGCAGGTCTGCTTCCGGGTaGTGCTTGCGAAATGGACCCCGCAGGCCTTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SFSYSPSRSASG*CLRNGPRRPCS Trigger: GCTGCAAGGCCTGCGGGGTCCATTTCGCAAGCACAACCCGGAAGCAGACCTGCTTGGACTGTAAGAAAAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000103218.3 ENSMUST00000108173.10 ENSMUST00000126660.2 |
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| CDS GCA 72 bp | GTCATGCAGAAGTTTTTCTTACAGTCCAAGCAGGTCTaGTTCCGGGTTGTGCTTGCGAAATGGACCCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: VMQKFFLQSKQV*FRVVLAKWTPQ Trigger: CTGCGGGGTCCATTTCGCAAGCACAACCCGGAAGCAGACCTGCTTGGACTGTAAGAAAAACTTCTGCATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000103218.3 ENSMUST00000108173.10 ENSMUST00000126660.2 |
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| CDS GCA 72 bp | AATCTTACACAGGTTCTCCTCCAGGCCAGAAGGCACTaGTCCCCCGTTTTGGTCTTCATTACCAGACACCAG | + |
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Preference number: 6 (lower is better) Translates to: NLTQVLLQARRH*SPVLVFITRHQ Trigger: CTGGTGTCTGGTAATGAAGACCAAAACGGGGGAGCAGTGCCTTCTGGCCTGGAGGAGAACCTGTGTAAGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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| CDS GCA 72 bp | CACACTCCAGCAGAACACAGTCAATGGGTGAGTCCATaGAAATCTTACACAGGTTCTCCTCCAGGCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: HTPAEHSQWVSP*KSYTGSPPGQK Trigger: CTTCTGGCCTGGAGGAGAACCTGTGTAAGATTTGCATGGACTCACCCATTGACTGTGTTCTGCTGGAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021036.13 ENSMUST00000071152.14 ENSMUST00000074515.11 ENSMUST00000093975.12 ENSMUST00000108173.10 |
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