Pregenerated sensors for RFC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023104Ensembl transcript IDs: ENSMUST00000023867.8, ENSMUST00000201258.4
Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCCTGTTCTCCAGGGATGCTCAAGTTTCACACCCTGGCCGTGGCTaGTCCACAGCCTGGGAGACACTGGGCATCGCCAGAGCCCCAACC | + |
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Preference number: 1 (lower is better) Translates to: SLFSRDAQVSHPGRG*STAWETLGIARAPT Trigger: GGTTGGGGCTCTGGCGATGCCCAGTGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGTGTGAAACTTGAGCATCCCTGGAGAACAGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR CCA 90 bp | GACAGCTGTGGCGCTGGCTCTCCTGCCCTCATGAGGGCTCCAGGCTaGGAAGACAAGCAAGCGCCTTTACCACTGAGCTATCTTGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: DSCGAGSPALMRAPG*EDKQAPLPLSYLVS Trigger: ACTGACAAGATAGCTCAGTGGTAAAGGCGCTTGCTTGTCTTCCCAGCCTGGAGCCCTCATGAGGGCAGGAGAGCCAGCGCCACAGCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR CCA 90 bp | GAGCACTTTACTTACTTGGAGGCAGTCAGAGGACAGCTGTGGCGCTaGCTCTCCTGCCCTCATGAGGGCTCCAGGCTGGGAAGACAAGCA | + |
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Preference number: 1 (lower is better) Translates to: EHFTYLEAVRGQLWR*LSCPHEGSRLGRQA Trigger: TGCTTGTCTTCCCAGCCTGGAGCCCTCATGAGGGCAGGAGAGCCAGCGCCACAGCTGTCCTCTGACTGCCTCCAAGTAAGTAAAGTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR CCA 90 bp | GCTGTAGAGCACTTTACTTACTTGGAGGCAGTCAGAGGACAGCTGTaGCGCTGGCTCTCCTGCCCTCATGAGGGCTCCAGGCTGGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: AVEHFTYLEAVRGQL*RWLSCPHEGSRLGR Trigger: TCTTCCCAGCCTGGAGCCCTCATGAGGGCAGGAGAGCCAGCGCCACAGCTGTCCTCTGACTGCCTCCAAGTAAGTAAAGTGCTCTACAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR GCA 90 bp | CTCACTGTAACCCAGGCAGCTGGTACTGAATTTGTGGCACCCCTCTaGCTCAGCACCCCAGGTGTTGGGATTATAGGCCTGTGCCACCAC | + |
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Preference number: 1 (lower is better) Translates to: LTVTQAAGTEFVAPL*LSTPGVGIIGLCHH Trigger: GTGGTGGCACAGGCCTATAATCCCAACACCTGGGGTGCTGAGGCAGAGGGGTGCCACAAATTCAGTACCAGCTGCCTGGGTTACAGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR TCA 90 bp | TCCTCTCTACAGAAGGGCCCGAGGATGGGGGATCTGAGCGGGAACTaGAGCCTTTACTGCCTGCTGAATAAAGCCTGTTCTCCAGGGATG | + |
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Preference number: 1 (lower is better) Translates to: SSLQKGPRMGDLSGN*SLYCLLNKACSPGM Trigger: CATCCCTGGAGAACAGGCTTTATTCAGCAGGCAGTAAAGGCTTCAGTTCCCGCTCAGATCCCCCATCCTCGGGCCCTTCTGTAGAGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR CCA 90 bp | GGGTCTTGTTCCCTTCGGTTCCTCCTGCCTTCCCCTGTGGAATTCTaGGATTGCAGGTGTGTGTCACCTCACCCGGTAAGCTGTCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: GSCSLRFLLPSPVEF*DCRCVSPHPVSCLF Trigger: AAAAAGACAGCTTACCGGGTGAGGTGACACACACCTGCAATCCCAGAATTCCACAGGGGAAGGCAGGAGGAACCGAAGGGAACAAGACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR TCA 90 bp | ACTTCTTTGGGGGCAAAGCAAGTGCCCAGAGGATATAGACTGTGCTaGCTGGAAGCCCAAGACCTGAGGCAAGATGTGTCCCCAGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: TSLGAKQVPRGYRLC*LEAQDLRQDVSPVS Trigger: TGAGACTGGGGACACATCTTGCCTCAGGTCTTGGGCTTCCAGTCAGCACAGTCTATATCCTCTGGGCACTTGCTTTGCCCCCAAAGAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR GCA 90 bp | CATGGGAAGGAAATGAATCTGGGTCTTGTTCCCTTCGGTTCCTCCTaGCTTCCCCTGTGGAATTCTGGGATTGCAGGTGTGTGTCACCTC | + |
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Preference number: 1 (lower is better) Translates to: HGKEMNLGLVPFGSS*LPLWNSGIAGVCHL Trigger: GAGGTGACACACACCTGCAATCCCAGAATTCCACAGGGGAAGGCAGGAGGAACCGAAGGGAACAAGACCCAGATTCATTTCCTTCCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR TCA 90 bp | CTCTTAACCACTGAGCCATCTCTCCAGCCCCAGCACTGGGGTTCTTaGATGACATGGGAAGGAAATGAATCTGGGTCTTGTTCCCTTCGG | + |
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Preference number: 1 (lower is better) Translates to: LLTTEPSLQPQHWGS*MTWEGNESGSCSLR Trigger: CCGAAGGGAACAAGACCCAGATTCATTTCCTTCCCATGTCATTCAAGAACCCCAGTGCTGGGGCTGGAGAGATGGCTCAGTGGTTAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR CCA 90 bp | TCCCTGGGCTGTGAAGATAATGGCTTCCAGGCCGTCATCTGTGTATaGCACCTTTTCCTTCTCGATGACATTCATGAGCCTGGTGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: SLGCEDNGFQAVICV*HLFLLDDIHEPGED Trigger: GTCCTCACCAGGCTCATGAATGTCATCGAGAAGGAAAAGGTGCCATACACAGATGACGGCCTGGAAGCCATTATCTTCACAGCCCAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
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| 3UTR TCA 90 bp | ATATTAGAAGAAACACCTAGAACCCAGCTGTTAGACACCGACACATaGGACGGTCTCACATTTCCCAGGCTGGCCTGGACTCCCCATAGC | + |
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Preference number: 1 (lower is better) Translates to: ILEETPRTQLLDTDT*DGLTFPRLAWTPHS Trigger: GCTATGGGGAGTCCAGGCCAGCCTGGGAAATGTGAGACCGTCTCATGTGTCGGTGTCTAACAGCTGGGTTCTAGGTGTTTCTTCTAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR TCA 90 bp | GCTATGAACCTAAGCTCCTCTGTAAGAGCAGTCAAGCCCAACTGCTaGGCAATCTCATCTCTCCTGCCTTCTGAACACGTGTCTGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: AMNLSSSVRAVKPNC*AISSLLPSEHVSVA Trigger: AGCCACAGACACGTGTTCAGAAGGCAGGAGAGATGAGATTGCTCAGCAGTTGGGCTTGACTGCTCTTACAGAGGAGCTTAGGTTCATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR GCA 90 bp | CTCTGTAGACCAGGCTGGCCTGGAACTCAGAGATCTGCCTACCTCTaGCTCTCGAGTACTAAGATTAAAGGTATGATCACCATTGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LCRPGWPGTQRSAYL*LSSTKIKGMITIAW Trigger: CCAGGCAATGGTGATCATACCTTTAATCTTAGTACTCGAGAGGCAGAGGTAGGCAGATCTCTGAGTTCCAGGCCAGCCTGGTCTACAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR CCA 90 bp | TGCCTGCTCTTGCAGGAGACCAAGGTTCAATTCCCAGCACCTACATaGAGGCTCACAACTATCTGCAACTCCCTTTCCAAGGGACACAAT | + |
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Preference number: 1 (lower is better) Translates to: CLLLQETKVQFPAPT*RLTTICNSLSKGHN Trigger: ATTGTGTCCCTTGGAAAGGGAGTTGCAGATAGTTGTGAGCCTCCATGTAGGTGCTGGGAATTGAACCTTGGTCTCCTGCAAGAGCAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR TCA 90 bp | AGTGCTGGGATTATAGGCATGTCTTTTGAGGCAGGGTCTAGAAGTTaGTCTCAGGCCCTCTTGCTTATGTTGCCAACTGAGCCATCTCCC | + |
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Preference number: 1 (lower is better) Translates to: SAGIIGMSFEAGSRS*SQALLLMLPTEPSP Trigger: GGGAGATGGCTCAGTTGGCAACATAAGCAAGAGGGCCTGAGATCAACTTCTAGACCCTGCCTCAAAAGACATGCCTATAATCCCAGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR TCA 90 bp | TTTGAACTCAGGACATTTGGAAGAGCAGTCAGTGCTCTTAACCACTaGGCCATCTCTCCAGCCCCAGCACTGGGGTTCTTGAATGACATG | + |
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Preference number: 1 (lower is better) Translates to: FELRTFGRAVSALNH*AISPAPALGFLNDM Trigger: CATGTCATTCAAGAACCCCAGTGCTGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAAATGTCCTGAGTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR CCA 90 bp | GGACCACAGACATCTGTCCCTGTGCTTGGCTTGTTACTTGGGTTCTaGGGAATCCAAACTCAGGTTGAGGCTGTAGAGCACTTTACTTAC | + |
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Preference number: 1 (lower is better) Translates to: GPQTSVPVLGLLLGF*GIQTQVEAVEHFTY Trigger: GTAAGTAAAGTGCTCTACAGCCTCAACCTGAGTTTGGATTCCCCAGAACCCAAGTAACAAGCCAAGCACAGGGACAGATGTCTGTGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR TCA 90 bp | TGTGCTTGGCTTGTTACTTGGGTTCTGGGGAATCCAAACTCAGGTTaGGGCTGTAGAGCACTTTACTTACTTGGAGGCAGTCAGAGGACA | + |
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Preference number: 1 (lower is better) Translates to: CAWLVTWVLGNPNSG*GCRALYLLGGSQRT Trigger: TGTCCTCTGACTGCCTCCAAGTAAGTAAAGTGCTCTACAGCCTCAACCTGAGTTTGGATTCCCCAGAACCCAAGTAACAAGCCAAGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR TCA 90 bp | CTGAAAGGCACCACTGCACCTGACCTTTGGTTTAAAACCTGTGTCTaGGTATATTCCATGTGTGGGTGCCTGCAGAATTCTGGAGGCACT | + |
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Preference number: 1 (lower is better) Translates to: LKGTTAPDLWFKTCV*VYSMCGCLQNSGGT Trigger: AGTGCCTCCAGAATTCTGCAGGCACCCACACATGGAATATACTCAGACACAGGTTTTAAACCAAAGGTCAGGTGCAGTGGTGCCTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR TCA 90 bp | CTCCAGCATCTTGAATACATTCTCACTGTTGATATAGCCAAATCCTaGGAAGGTGGACTGCAGGTTGTTCAGTGCCTGGCGCATGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: LQHLEYILTVDIAKS*EGGLQVVQCLAHVS Trigger: GGAGACATGCGCCAGGCACTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTATATCAACAGTGAGAATGTATTCAAGATGCTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
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| 3UTR GCA 90 bp | ATTCTTAGTAGAAATGACCCTGAGGTCCAGAGAGGAATGGGGCTATaGACTTCATGTCCAGCCCCCTTCCCTGGACACCACAAATTCATT | + |
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Preference number: 1 (lower is better) Translates to: ILSRNDPEVQRGMGL*TSCPAPFPGHHKFI Trigger: AATGAATTTGTGGTGTCCAGGGAAGGGGGCTGGACATGAAGTGCATAGCCCCATTCCTCTCTGGACCTCAGGGTCATTTCTACTAAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR TCA 90 bp | TCAGACACTCCAGAAGAGGGCATCAGATCTTGTTACAGATGGTTGTaGGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACATTTGGA | + |
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Preference number: 1 (lower is better) Translates to: SDTPEEGIRSCYRWL*ATMWLLGFELRTFG Trigger: TCCAAATGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTGATGCCCTCTTCTGGAGTGTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR CCA 90 bp | CCAGAGAGGAATGGGGCTATGCACTTCATGTCCAGCCCCCTTCCCTaGACACCACAAATTCATTCTAAGAAATGGATGCTACAAGTTACT | + |
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Preference number: 1 (lower is better) Translates to: PERNGAMHFMSSPLP*TPQIHSKKWMLQVT Trigger: AGTAACTTGTAGCATCCATTTCTTAGAATGAATTTGTGGTGTCCAGGGAAGGGGGCTGGACATGAAGTGCATAGCCCCATTCCTCTCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR CCA 90 bp | GCATCAGATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACATTTGGAAGAGCAGTCAGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASDLVTDGCEPPCGC*DLNSGHLEEQSVLL Trigger: TAAGAGCACTGACTGCTCTTCCAAATGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR GCA 90 bp | CCCTTTCCAAGGGACACAATGCACTCTTTAGGCCTTCTTAGGCACTaGATGTGTTCAGTGAGCAGGTATACATGCAGGCAAAACAATAAA | + |
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Preference number: 1 (lower is better) Translates to: PFPRDTMHSLGLLRH*MCSVSRYTCRQNNK Trigger: TTTATTGTTTTGCCTGCATGTATACCTGCTCACTGAACACATGCAGTGCCTAAGAAGGCCTAAAGAGTGCATTGTGTCCCTTGGAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR CCA 90 bp | ATGTCCAGCCCCCTTCCCTGGACACCACAAATTCATTCTAAGAAATaGATGCTACAAGTTACTATATTAGAAGAAACACCTAGAACCCAG | + |
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Preference number: 1 (lower is better) Translates to: MSSPLPWTPQIHSKK*MLQVTILEETPRTQ Trigger: CTGGGTTCTAGGTGTTTCTTCTAATATAGTAACTTGTAGCATCCATTTCTTAGAATGAATTTGTGGTGTCCAGGGAAGGGGGCTGGACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR CCA 90 bp | ATATGTTCCCTGGTGATAAACAGACATGGGGAAAGGGTTGTGACTTaGGGTAGAAGTGACAGGGCTTTGAAATTTAAAGACAAAGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: ICSLVINRHGERVVT*GRSDRALKFKDKGS Trigger: AGAACCTTTGTCTTTAAATTTCAAAGCCCTGTCACTTCTACCCCAAGTCACAACCCTTTCCCCATGTCTGTTTATCACCAGGGAACATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR TCA 90 bp | AGAGATCTGCCTACCTCTGCCTCTCGAGTACTAAGATTAAAGGTATaGTCACCATTGCCTGGCTTAAGATCAAGATTCTTAGTAGAAATG | + |
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Preference number: 1 (lower is better) Translates to: RDLPTSASRVLRLKV*SPLPGLRSRFLVEM Trigger: CATTTCTACTAAGAATCTTGATCTTAAGCCAGGCAATGGTGATCATACCTTTAATCTTAGTACTCGAGAGGCAGAGGTAGGCAGATCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR CAA 90 bp | GGGCTCCCCAGAGAATGTTTGTGGAGTCAGTTCTCTTCCACCTGCTaGTGGGTTCTGGGGATGGAACTCAGGAGGCCGGGTGTGTGGCCG | + |
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Preference number: 2 (lower is better) Translates to: GLPRECLWSQFSSTC*WVLGMELRRPGVWP Trigger: CGGCCACACACCCGGCCTCCTGAGTTCCATCCCCAGAACCCACAAGCAGGTGGAAGAGAACTGACTCCACAAACATTCTCTGGGGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR-3UTR GCA 90 bp | TATGTGGCCTTGGCTGGCATGGGACTTGATATGCAGACCACACTGGCCCTGAACGTGTGTGGCCGACACTaGTGCAGTCTCACTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: YVALAGMGLDMQTTLALNVCGRH*CSLTGP Trigger: GGGGCCAGTGAGACTGCAGCAGTGTCGGCCACACAC...GTTCAGGGCCAGTGTGGTCTGCATATCAAGTCCCATGCCAGCCAAGGCCACATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR-3UTR GCA 90 bp | GGGATGCTCAAGTTTCACACCCTGGCCGTGGCTGCTCCACAGCCTGGGAGACACGTGAGATGGCAATTCTaGCTGCTCTTGCAGGAGACC | + |
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Preference number: 2 (lower is better) Translates to: GMLKFHTLAVAAPQPGRHVRWQF*LLLQET Trigger: GGTCTCCTGCAAGAGCAGGCAGAATTGCCATCTCAC...GTGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGTGTGAAACTTGAGCATCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGCAGCTGGTACTGAATTTGTGGCACCCCTCTGCCTCAGCACCCCAGGTGTCTTCCACCTGCTTGTaGGTTCTGGGGATGGAACTC | + |
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Preference number: 2 (lower is better) Translates to: PRQLVLNLWHPSASAPQVSSTCL*VLGMEL Trigger: GAGTTCCATCCCCAGAACCCACAAGCAGGTGGAAGA...CACCTGGGGTGCTGAGGCAGAGGGGTGCCACAAATTCAGTACCAGCTGCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR-3UTR CCA 90 bp | GACAAAGGTTCTCTCTTCTTCCTCACTGGAAGAGGTTGGCGACCAGCTAGCCAGGGCTGCTCCACAGCCTaGGAGACACTGGGCATCGCC | + |
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Preference number: 2 (lower is better) Translates to: DKGSLFFLTGRGWRPASQGCSTA*ETLGIA Trigger: GGCGATGCCCAGTGTCTCCCAGGCTGTGGAGCAGCC...CTGGCTAGCTGGTCGCCAACCTCTTCCAGTGAGGAAGAAGAGAGAACCTTTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR-3UTR GCA 90 bp | GACAAAGGTTCTCTCTTCTTCCTCACTGGAAGAGGTTGGCGACCAGCTAGCCAGTGTGGCCGACACTGCTaGAGTCTCACTGGCCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: DKGSLFFLTGRGWRPASQCGRHC*SLTGPR Trigger: CCTGGGGCCAGTGAGACTGCAGCAGTGTCGGCCACA...CTGGCTAGCTGGTCGCCAACCTCTTCCAGTGAGGAAGAAGAGAGAACCTTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR-3UTR CCA 90 bp | GGGATGCTCAAGTTTCACACCCTGGCCGTGGCTGCTCCACAGCCTGGGAGACACAGGTCCAGAGAGGAATaGGGCTATGCACTTCATGTC | + |
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Preference number: 2 (lower is better) Translates to: GMLKFHTLAVAAPQPGRHRSREE*GYALHV Trigger: GACATGAAGTGCATAGCCCCATTCCTCTCTGGACCT...GTGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGTGTGAAACTTGAGCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR-3UTR GCA 90 bp | TATGTGGCCTTGGCTGGCATGGGACTTGATATGCAGACCACACTGGCCCTGAACTTTGTGGCACCCCTCTaGCTCAGCACCCCAGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: YVALAGMGLDMQTTLALNFVAPL*LSTPGV Trigger: AACACCTGGGGTGCTGAGGCAGAGGGGTGCCACAAA...GTTCAGGGCCAGTGTGGTCTGCATATCAAGTCCCATGCCAGCCAAGGCCACATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR CAA 90 bp | TGGGGAATCCAAACTCAGGTTGAGGCTGTAGAGCACTTTACTTACTaGGAGGCAGTCAGAGGACAGCTGTGGCGCTGGCTCTCCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: WGIQTQVEAVEHFTY*EAVRGQLWRWLSCP Trigger: AGGGCAGGAGAGCCAGCGCCACAGCTGTCCTCTGACTGCCTCCAAGTAAGTAAAGTGCTCTACAGCCTCAACCTGAGTTTGGATTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR-3UTR TCA 90 bp | GACAAAGGTTCTCTCTTCTTCCTCACTGGAAGAGGTTGGCGACCAGCTAGCCAGCCAGGCAGCTGGTACTaGATTTGTGGCACCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: DKGSLFFLTGRGWRPASQPGSWY*ICGTPL Trigger: CAGAGGGGTGCCACAAATTCAGTACCAGCTGCCTGG...CTGGCTAGCTGGTCGCCAACCTCTTCCAGTGAGGAAGAAGAGAGAACCTTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR-3UTR GCA 90 bp | CACAATATGTTCCCTGGTGATAAACAGACATGGGGAAAGGGTTGTGACTTGGGGTGGCGCTGGCTCTCCTaGCCTCATGAGGGCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: HNMFPGDKQTWGKGCDLGWRWLS*PHEGSR Trigger: CCTGGAGCCCTCATGAGGGCAGGAGAGCCAGCGCCA...CCCCAAGTCACAACCCTTTCCCCATGTCTGTTTATCACCAGGGAACATATTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGTCCAGAGAGGAATGGGGCTATGCACTTCATGTCCAGCCCCCTTCCCTGTTCCCAGCACCTACATaGAGGCTCACAACTATCTGC | + |
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Preference number: 2 (lower is better) Translates to: LRSREEWGYALHVQPPSLFPAPT*RLTTIC Trigger: GCAGATAGTTGTGAGCCTCCATGTAGGTGCTGGGAA...CAGGGAAGGGGGCTGGACATGAAGTGCATAGCCCCATTCCTCTCTGGACCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR-3UTR CCA 90 bp | TATGTGGCCTTGGCTGGCATGGGACTTGATATGCAGACCACACTGGCCCTGAACTCTGTGTGTAGCCCCTaGCTGTCCTGGAACTCACTC | + |
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Preference number: 2 (lower is better) Translates to: YVALAGMGLDMQTTLALNSVCSP*LSWNSL Trigger: GAGTGAGTTCCAGGACAGCCAGGGGCTACACACAGA...GTTCAGGGCCAGTGTGGTCTGCATATCAAGTCCCATGCCAGCCAAGGCCACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCTTCTTCCTCACTGGAAGAGGTTGGCGACCAGCTAGCCAGAGTCAGCACGGTTCTCAGAACTGGTaGGATGGCAATTCTGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SLFFLTGRGWRPASQSQHGSQNW*DGNSAC Trigger: GCAGGCAGAATTGCCATCTCACCAGTTCTGAGAACC...GTGCTGACTCTGGCTAGCTGGTCGCCAACCTCTTCCAGTGAGGAAGAAGAGAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR-3UTR GCA 90 bp | TATGTGGCCTTGGCTGGCATGGGACTTGATATGCAGACCACACTGGCCCTGAACTGGAACTCAGAGATCTaGCTACCTCTGCCTCTCGAG | + |
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Preference number: 2 (lower is better) Translates to: YVALAGMGLDMQTTLALNWNSEI*LPLPLE Trigger: CTCGAGAGGCAGAGGTAGGCAGATCTCTGAGTTCCA...GTTCAGGGCCAGTGTGGTCTGCATATCAAGTCCCATGCCAGCCAAGGCCACATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR CAA 90 bp | GACCTGCCAGTGCTAGGACCACAGACATCTGTCCCTGTGCTTGGCTaGTTACTTGGGTTCTGGGGAATCCAAACTCAGGTTGAGGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: DLPVLGPQTSVPVLG*LLGFWGIQTQVEAV Trigger: TACAGCCTCAACCTGAGTTTGGATTCCCCAGAACCCAAGTAACAAGCCAAGCACAGGGACAGATGTCTGTGGTCCTAGCACTGGCAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR-3UTR CCA 90 bp | TACCTCTGCCTCTCGAGTACTAAGATTAAAGGTATGATCACCATTGCCTGGCTTTTTCCCAGGCTGGCCTaGACTCCCCATAGCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: YLCLSSTKIKGMITIAWLFPRLA*TPHSRA Trigger: GGCCCTGCTATGGGGAGTCCAGGCCAGCCTGGGAAA...AAGCCAGGCAATGGTGATCATACCTTTAATCTTAGTACTCGAGAGGCAGAGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| 3UTR CAA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACATTaGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: GCEPPCGCWDLNSGH*EEQSVLLTTEPSLQ Trigger: CTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAAATGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGTAGCTTCAGACACTCCAGAAGAGGGCATCAGATCTTGTTACAGATGGTTGGGCTGGCATGGGACTTaGTATGCAGACCACACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: TVASDTPEEGIRSCYRWLGWHGT*YADHTG Trigger: GCCAGTGTGGTCTGCATATCAAGTCCCATGCCAGCC...CAACCATCTGTAACAAGATCTGATGCCCTCTTCTGGAGTGTCTGAAGCTACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGACATTTGGAAGAGCAGTCAGTGCTCTTAGACAGCACCTGCCTCTaGCTCCCAAGTGCTGGGATT | + |
|
Preference number: 2 (lower is better) Translates to: CGCWDLNSGHLEEQSVLLDSTCL*LPSAGI Trigger: AATCCCAGCACTTGGGAGGCAGAGGCAGGTGCTGTC...TAAGAGCACTGACTGCTCTTCCAAATGTCCTGAGTTCAAATCCCAGCAACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTATGTTGCCAACTGAGCCATCTCCCCAACTCTCCTCTCTACAGAAGGGCCCGAATTCTGCCTGCTCTTaGAGGAGACCAAGGTTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: LMLPTEPSPQLSSLQKGPNSACS*RRPRFN Trigger: ATTGAACCTTGGTCTCCTGCAAGAGCAGGCAGAATT...CGGGCCCTTCTGTAGAGAGGAGAGTTGGGGAGATGGCTCAGTTGGCAACATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR GCA 90 bp | TATGTGGCCTTGGCTGGCATGGGACTTGATATGCAGACCACACTGGCCCTGAACATGAGAGACCCTGTCTaGTTCTACTTCCTGGATACA | + |
|
Preference number: 2 (lower is better) Translates to: YVALAGMGLDMQTTLALNMRDPV*FYFLDT Trigger: TGTATCCAGGAAGTAGAAGCAGACAGGGTCTCTCAT...GTTCAGGGCCAGTGTGGTCTGCATATCAAGTCCCATGCCAGCCAAGGCCACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR GCA 90 bp | CACAATATGTTCCCTGGTGATAAACAGACATGGGGAAAGGGTTGTGACTTGGGGCCCTTCGGTTCCTCCTaGCTTCCCCTGTGGAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: HNMFPGDKQTWGKGCDLGPFGSS*LPLWNS Trigger: AGAATTCCACAGGGGAAGGCAGGAGGAACCGAAGGG...CCCCAAGTCACAACCCTTTCCCCATGTCTGTTTATCACCAGGGAACATATTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTAGCTTCAGACACTCCAGAAGAGGGCATCAGATCTTGTTACAGATGGTTGCCTGCTTGTGGGTTCTaGGGATGGAACTCAGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: TVASDTPEEGIRSCYRWLPACGF*GWNSGG Trigger: GCCTCCTGAGTTCCATCCCCAGAACCCACAAGCAGG...CAACCATCTGTAACAAGATCTGATGCCCTCTTCTGGAGTGTCTGAAGCTACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGACATTTGGAAGAGCAGTCAGTGCTCTTACGCAGAAAGCACACATaGCACACACCTCCAACCCCA | + |
|
Preference number: 2 (lower is better) Translates to: CGCWDLNSGHLEEQSVLLRRKHT*HTPPTP Trigger: TGGGGTTGGAGGTGTGTGTCATGTGTGCTTTCTGCG...TAAGAGCACTGACTGCTCTTCCAAATGTCCTGAGTTCAAATCCCAGCAACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGACATTTGGAAGAGCAGTCAGTGCTCTTAACACGTGTCTGTGGCTaGGCTGGTAGGCTTGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: CGCWDLNSGHLEEQSVLLTRVCG*AGRLAD Trigger: ATCAGCAAGCCTACCAGCTCAGCCACAGACACGTGT...TAAGAGCACTGACTGCTCTTCCAAATGTCCTGAGTTCAAATCCCAGCAACCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTGGAAGCCCAAGACCTGAGGCAAGATGTGTCCCCAGTCTCACATCTAAAATGTATTCCATGTGTGGGTaGCTGCAGAATTCTGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: TGSPRPEARCVPSLTSKMYSMCG*LQNSGG Trigger: GCCTCCAGAATTCTGCAGGCACCCACACATGGAATA...CATTTTAGATGTGAGACTGGGGACACATCTTGCCTCAGGTCTTGGGCTTCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCTCCTTGATGAACTCCAGTTTCAAGTATTCAGCCATCGGGAAGGTTTTGCAGAGGTTGTTCAGTGCCTaGCGCATGTCTCCCTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: ISLMNSSFKYSAIGKVLQRLFSA*RMSPWA Trigger: AGCCCAGGGAGACATGCGCCAGGCACTGAACAACCT...CTGCAAAACCTTCCCGATGGCTGAATACTTGAAACTGGAGTTCATCAAGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
||
| 3UTR-3UTR TCA 90 bp | ATCTCCTTGATGAACTCCAGTTTCAAGTATTCAGCCATCGGGAAGGTTTTGCAGGATGACATCTTCTGGTaGGTAGCCCAGGTGCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: ISLMNSSFKYSAIGKVLQDDIFW*VAQVPQ Trigger: CTGTGGCACCTGGGCTACTCACCAGAAGATGTCATC...CTGCAAAACCTTCCCGATGGCTGAATACTTGAAACTGGAGTTCATCAAGGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
||
| 3UTR-3UTR GCA 90 bp | TTCATGTCCAGCCCCCTTCCCTGGACACCACAAATTCATTCTAAGAAATGGATGCAGTTCTCTTCCACCTaGTTGTGGGTTCTGGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: FMSSPLPWTPQIHSKKWMQFSST*LWVLGM Trigger: CATCCCCAGAACCCACAAGCAGGTGGAAGAGAACTG...CATCCATTTCTTAGAATGAATTTGTGGTGTCCAGGGAAGGGGGCTGGACATGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR TCA 90 bp | CACAATATGTTCCCTGGTGATAAACAGACATGGGGAAAGGGTTGTGACTTGGGGGACATGGGAAGGAAATaGATCTGGGTCTTGTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: HNMFPGDKQTWGKGCDLGDMGRK*IWVLFP Trigger: AGGGAACAAGACCCAGATTCATTTCCTTCCCATGTC...CCCCAAGTCACAACCCTTTCCCCATGTCTGTTTATCACCAGGGAACATATTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCTCCTTGATGAACTCCAGTTTCAAGTATTCAGCCATCGGGAAGGTTTTGCAGCAGGAGACACCATCTTaGGGCCCAGACTCGTTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: ISLMNSSFKYSAIGKVLQQETPS*GPDSFS Trigger: TGAAAACGAGTCTGGGCCTCAAGATGGTGTCTCCTG...CTGCAAAACCTTCCCGATGGCTGAATACTTGAAACTGGAGTTCATCAAGGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
||
| 3UTR-3UTR GCA 90 bp | GACAAAGGTTCTCTCTTCTTCCTCACTGGAAGAGGTTGGCGACCAGCTAGCCAGGTGAGCAGGTATACATaGAGGCAAAACAATAAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: DKGSLFFLTGRGWRPASQVSRYT*RQNNKN Trigger: GTTTTTATTGTTTTGCCTGCATGTATACCTGCTCAC...CTGGCTAGCTGGTCGCCAACCTCTTCCAGTGAGGAAGAAGAGAGAACCTTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTATGATCACCATTGCCTGGCTTAAGATCAAGATTCTTAGTAGAAATGACCCTCCCATGTCCAGGGCTTaGATTCACACAGAAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: GMITIAWLKIKILSRNDPPMSRA*IHTEEQ Trigger: CTGCTCTTCTGTGTGAATTCAAGCCCTGGACATGGG...AGGGTCATTTCTACTAAGAATCTTGATCTTAAGCCAGGCAATGGTGATCATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR TCA 90 bp | CACAATATGTTCCCTGGTGATAAACAGACATGGGGAAAGGGTTGTGACTTGGGGCTAAGTTACTCAGGCTaGTCTCAAACTTGTAACCCT | + |
|
Preference number: 2 (lower is better) Translates to: HNMFPGDKQTWGKGCDLGLSYSG*SQTCNP Trigger: AGGGTTACAAGTTTGAGATCAGCCTGAGTAACTTAG...CCCCAAGTCACAACCCTTTCCCCATGTCTGTTTATCACCAGGGAACATATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCTCCTTGATGAACTCCAGTTTCAAGTATTCAGCCATCGGGAAGGTTTTGCAGGATATAGCCAAATCCTaGGAAGGTGGACTGCAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: ISLMNSSFKYSAIGKVLQDIAKS*EGGLQV Trigger: AACCTGCAGTCCACCTTCTCAGGATTTGGCTATATC...CTGCAAAACCTTCCCGATGGCTGAATACTTGAAACTGGAGTTCATCAAGGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
||
| 3UTR CAA 90 bp | AGACATGGGGAAAGGGTTGTGACTTGGGGTAGAAGTGACAGGGCTTaGAAATTTAAAGACAAAGGTTCTCTCTTCTTCCTCACTGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RHGERVVTWGRSDRA*KFKDKGSLFFLTGR Trigger: TCTTCCAGTGAGGAAGAAGAGAGAACCTTTGTCTTTAAATTTCAAAGCCCTGTCACTTCTACCCCAAGTCACAACCCTTTCCCCATGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTATGATCACCATTGCCTGGCTTAAGATCAAGATTCTTAGTAGAAATGACCCTAGGCTCACAACTATCTaGAACTCCCTTTCCAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: GMITIAWLKIKILSRNDPRLTTI*NSLSKG Trigger: TCCCTTGGAAAGGGAGTTGCAGATAGTTGTGAGCCT...AGGGTCATTTCTACTAAGAATCTTGATCTTAAGCCAGGCAATGGTGATCATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTGTAGCTTCAGACACTCCAGAAGAGGGCATCAGATCTTGTTACAGATGGTTGTGTTTTTGTTTTGGCTaGAGGATCTCACTAAGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: TVASDTPEEGIRSCYRWLCFCFG*RISLSY Trigger: GTAACTTAGTGAGATCCTGCAGCCAAAACAAAAACA...CAACCATCTGTAACAAGATCTGATGCCCTCTTCTGGAGTGTCTGAAGCTACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCTCCTTGATGAACTCCAGTTTCAAGTATTCAGCCATCGGGAAGGTTTTGCAGATACATTCTCACTGTTaGTATAGCCAAATCCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ISLMNSSFKYSAIGKVLQIHSHC*YSQILR Trigger: TCTCAGGATTTGGCTATATCAACAGTGAGAATGTAT...CTGCAAAACCTTCCCGATGGCTGAATACTTGAAACTGGAGTTCATCAAGGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
||
| 3UTR-3UTR GCA 90 bp | TACCTCTGCCTCTCGAGTACTAAGATTAAAGGTATGATCACCATTGCCTGGCTTAAAAATTATGGTGTATaGTACTGTGCCTGGCTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: YLCLSSTKIKGMITIAWLKNYGV*YCAWLH Trigger: ATGAAGCCAGGCACAGTAGCATACACCATAATTTTT...AAGCCAGGCAATGGTGATCATACCTTTAATCTTAGTACTCGAGAGGCAGAGGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTATGATCACCATTGCCTGGCTTAAGATCAAGATTCTTAGTAGAAATGACCCTAGTTCAAGGTCAGCCTaGGGTACAAGAGACTATTTT | + |
|
Preference number: 2 (lower is better) Translates to: GMITIAWLKIKILSRNDPSSRSA*GTRDYF Trigger: AAAATAGTCTCTTGTACCCCAGGCTGACCTTGAACT...AGGGTCATTTCTACTAAGAATCTTGATCTTAAGCCAGGCAATGGTGATCATACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | ACCCTGGCCGTGGCTGCTCCACAGCCTGGGAGACACTaGGCATCGCCAGAGCCCCAACCCTCAAGTGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: TLAVAAPQPGRH*ASPEPQPSSDA Trigger: GGCATCACTTGAGGGTTGGGGCTCTGGCGATGCCCAGTGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | CAAGTTTCACACCCTGGCCGTGGCTGCTCCACAGCCTaGGAGACACTGGGCATCGCCAGAGCCCCAACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QVSHPGRGCSTA*ETLGIARAPTL Trigger: GAGGGTTGGGGCTCTGGCGATGCCCAGTGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGTGTGAAACTTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR GCA 72 bp | GGATGGAACTCAGGAGGCCGGGTGTGTGGCCGACACTaGTGCAGTCTCACTGGCCCCAGGGCACCCTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GWNSGGRVCGRH*CSLTGPRAPFL Trigger: TAGAAAGGGTGCCCTGGGGCCAGTGAGACTGCAGCAGTGTCGGCCACACACCCGGCCTCCTGAGTTCCATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR GCA 72 bp | GAGGCAGTCAGAGGACAGCTGTGGCGCTGGCTCTCCTaGCCTCATGAGGGCTCCAGGCTGGGAAGACAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: EAVRGQLWRWLS*PHEGSRLGRQA Trigger: TGCTTGTCTTCCCAGCCTGGAGCCCTCATGAGGGCAGGAGAGCCAGCGCCACAGCTGTCCTCTGACTGCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | ACCTGCTGGTCCAGCGAGCCCCAGGGATCCTGTCTCTaGCCTGCCAGTGCTAGGACCACAGACATCTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TCWSSEPQGSCL*PASARTTDICP Trigger: GGGACAGATGTCTGTGGTCCTAGCACTGGCAGGTCAGAGACAGGATCCCTGGGGCTCGCTGGACCAGCAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | ACTTACTTGGAGGCAGTCAGAGGACAGCTGTGGCGCTaGCTCTCCTGCCCTCATGAGGGCTCCAGGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TYLEAVRGQLWR*LSCPHEGSRLG Trigger: TCCCAGCCTGGAGCCCTCATGAGGGCAGGAGAGCCAGCGCCACAGCTGTCCTCTGACTGCCTCCAAGTAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | GTTCTCCAGGGATGCTCAAGTTTCACACCCTGGCCGTaGCTGCTCCACAGCCTGGGAGACACTGGGCATCGC | + |
|
Preference number: 3 (lower is better) Translates to: VLQGCSSFTPWP*LLHSLGDTGHR Trigger: GCGATGCCCAGTGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGTGTGAAACTTGAGCATCCCTGGAGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGATGCTCAAGTTTCACACCCTGGCCGTGGCTGCTCCACAGCCTGGGAGACACATGCCCTGGACTTCTTaGGGGGCAAAGCAAGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GMLKFHTLAVAAPQPGRHMPWTS*GAKQVP Trigger: GGGCACTTGCTTTGCCCCCAAAGAAGTCCAGGGCAT...GTGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGTGTGAAACTTGAGCATCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR GCA 72 bp | ACTAGGCTGGCCTTGAACTCAGACAGCACCTGCCTCTaGCTCCCAAGTGCTGGGATTAAAGGCGGGCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: TRLALNSDSTCL*LPSAGIKGGLP Trigger: GGGGAGCCCGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGCTGTCTGAGTTCAAGGCCAGCCTAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | GGCGCTGGCTCTCCTGCCCTCATGAGGGCTCCAGGCTaGGAAGACAAGCAAGCGCCTTTACCACTGAGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: GAGSPALMRAPG*EDKQAPLPLSY Trigger: ATAGCTCAGTGGTAAAGGCGCTTGCTTGTCTTCCCAGCCTGGAGCCCTCATGAGGGCAGGAGAGCCAGCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | GGGCATCGCCAGAGCCCCAACCCTCAAGTGATGCCCTaGACTTCTTTGGGGGCAAAGCAAGTGCCCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GHRQSPNPQVMP*TSLGAKQVPRG Trigger: TCCTCTGGGCACTTGCTTTGCCCCCAAAGAAGTCCAGGGCATCACTTGAGGGTTGGGGCTCTGGCGATGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | AAGCCTGTTCTCCAGGGATGCTCAAGTTTCACACCCTaGCCGTGGCTGCTCCACAGCCTGGGAGACACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KPVLQGCSSFTP*PWLLHSLGDTG Trigger: CCCAGTGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGTGTGAAACTTGAGCATCCCTGGAGAACAGGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | GAGACACTGGGCATCGCCAGAGCCCCAACCCTCAAGTaGTGCCCTGGACTTCTTTGGGGGCAAAGCAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ETLGIARAPTLK*CPGLLWGQSKC Trigger: GCACTTGCTTTGCCCCCAAAGAAGTCCAGGGCATCACTTGAGGGTTGGGGCTCTGGCGATGCCCAGTGTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | AGGCCGGGTGTGTGGCCGACACTGCTGCAGTCTCACTaGCCCCAGGGCACCCTTTCTAATATTGGGGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: RPGVWPTLLQSH*PQGTLSNIGVQ Trigger: TTGAACCCCAATATTAGAAAGGGTGCCCTGGGGCCAGTGAGACTGCAGCAGTGTCGGCCACACACCCGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | TGTGGAGTCAGTTCTCTTCCACCTGCTTGTGGGTTCTaGGGATGGAACTCAGGAGGCCGGGTGTGTGGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: CGVSSLPPACGF*GWNSGGRVCGR Trigger: TCGGCCACACACCCGGCCTCCTGAGTTCCATCCCCAGAACCCACAAGCAGGTGGAAGAGAACTGACTCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | CACTTTACTTACTTGGAGGCAGTCAGAGGACAGCTGTaGCGCTGGCTCTCCTGCCCTCATGAGGGCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HFTYLEAVRGQL*RWLSCPHEGSR Trigger: CCTGGAGCCCTCATGAGGGCAGGAGAGCCAGCGCCACAGCTGTCCTCTGACTGCCTCCAAGTAAGTAAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGGGGATGGAACTCAGGAGGCCGGGTGTGTGGCCGACACTGCTGCAGTCTCCCCCATGTCCAGGGCTaGAATTCACACAGAAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FWGWNSGGRVCGRHCCSLPHVQG*NSHRRA Trigger: TGCTCTTCTGTGTGAATTCAAGCCCTGGACATGGGG...GAGACTGCAGCAGTGTCGGCCACACACCCGGCCTCCTGAGTTCCATCCCCAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR GCA 72 bp | ACCCAGGCAGCTGGTACTGAATTTGTGGCACCCCTCTaGCTCAGCACCCCAGGTGTTGGGATTATAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TQAAGTEFVAPL*LSTPGVGIIGL Trigger: CAGGCCTATAATCCCAACACCTGGGGTGCTGAGGCAGAGGGGTGCCACAAATTCAGTACCAGCTGCCTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | TCCCTTCGGTTCCTCCTGCCTTCCCCTGTGGAATTCTaGGATTGCAGGTGTGTGTCACCTCACCCGGTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLRFLLPSPVEF*DCRCVSPHPVS Trigger: GCTTACCGGGTGAGGTGACACACACCTGCAATCCCAGAATTCCACAGGGGAAGGCAGGAGGAACCGAAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | ACACCGACACATGAGACGGTCTCACATTTCCCAGGCTaGCCTGGACTCCCCATAGCAGGGCCTAGCTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: TPTHETVSHFPG*PGLPIAGPSFE Trigger: TTCAAAGCTAGGCCCTGCTATGGGGAGTCCAGGCCAGCCTGGGAAATGTGAGACCGTCTCATGTGTCGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | GGTCTTGTTCCCTTCGGTTCCTCCTGCCTTCCCCTGTaGAATTCTGGGATTGCAGGTGTGTGTCACCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: GLVPFGSSCLPL*NSGIAGVCHLT Trigger: GGTGAGGTGACACACACCTGCAATCCCAGAATTCCACAGGGGAAGGCAGGAGGAACCGAAGGGAACAAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | GGGGCAAAGCAAGTGCCCAGAGGATATAGACTGTGCTaGCTGGAAGCCCAAGACCTGAGGCAAGATGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GAKQVPRGYRLC*LEAQDLRQDVS Trigger: GGACACATCTTGCCTCAGGTCTTGGGCTTCCAGTCAGCACAGTCTATATCCTCTGGGCACTTGCTTTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | CAGAAGGGCCCGAGGATGGGGGATCTGAGCGGGAACTaGAGCCTTTACTGCCTGCTGAATAAAGCCTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QKGPRMGDLSGN*SLYCLLNKACS Trigger: AGAACAGGCTTTATTCAGCAGGCAGTAAAGGCTTCAGTTCCCGCTCAGATCCCCCATCCTCGGGCCCTTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR GCA 72 bp | CAGTCACACTGTGTAGCCCCTGGCTACCCTGGAACTTaGTTTATAAACCGGGGTGACCCTGATGAGAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: QSHCVAPGYPGT*FINRGDPDERP Trigger: GGGTCTCTCATCAGGGTCACCCCGGTTTATAAAGCAAGTTCCAGGGTAGCCAGGGGCTACACAGTGTGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | GAATGTTTGTGGAGTCAGTTCTCTTCCACCTGCTTGTaGGTTCTGGGGATGGAACTCAGGAGGCCGGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ECLWSQFSSTCL*VLGMELRRPGV Trigger: CACACCCGGCCTCCTGAGTTCCATCCCCAGAACCCACAAGCAGGTGGAAGAGAACTGACTCCACAAACATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | CTGGCATGGGACTTGATATGCAGACCACACTGGCCCTaGACTCACAGTGATCCTCCTGCCTCTACCTATGGA | + |
|
Preference number: 3 (lower is better) Translates to: LAWDLICRPHWP*THSDPPASTYG Trigger: TCCATAGGTAGAGGCAGGAGGATCACTGTGAGTTCAGGGCCAGTGTGGTCTGCATATCAAGTCCCATGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | AGGACATTTGGAAGAGCAGTCAGTGCTCTTAACCACTaGGCCATCTCTCCAGCCCCAGCACTGGGGTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: RTFGRAVSALNH*AISPAPALGFL Trigger: CAAGAACCCCAGTGCTGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAAATGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | AGCCATCTCTCCAGCCCCAGCACTGGGGTTCTTGAATaGCATGGGAAGGAAATGAATCTGGGTCTTGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SHLSSPSTGVLE*HGKEMNLGLVP Trigger: GGGAACAAGACCCAGATTCATTTCCTTCCCATGTCATTCAAGAACCCCAGTGCTGGGGCTGGAGAGATGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | TTCTTAGTAGAAATGACCCTGAGGTCCAGAGAGGAATaGGGCTATGCACTTCATGTCCAGCCCCCTTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FLVEMTLRSREE*GYALHVQPPSL Trigger: CAGGGAAGGGGGCTGGACATGAAGTGCATAGCCCCATTCCTCTCTGGACCTCAGGGTCATTTCTACTAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | GCCAGTGCTAGGACCACAGACATCTGTCCCTGTGCTTaGCTTGTTACTTGGGTTCTGGGGAATCCAAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: ASARTTDICPCA*LVTWVLGNPNS Trigger: TGAGTTTGGATTCCCCAGAACCCAAGTAACAAGCCAAGCACAGGGACAGATGTCTGTGGTCCTAGCACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR CAA 90 bp | GACAAAGGTTCTCTCTTCTTCCTCACTGGAAGAGGTTGGCGACCAGCTAGCCAGCCAGCACTGGGGTTCTaGAATGACATGGGAAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: DKGSLFFLTGRGWRPASQPALGF*NDMGRK Trigger: TTTCCTTCCCATGTCATTCAAGAACCCCAGTGCTGG...CTGGCTAGCTGGTCGCCAACCTCTTCCAGTGAGGAAGAAGAGAGAACCTTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | CTAAGCTCCTCTGTAAGAGCAGTCAAGCCCAACTGCTaGGCAATCTCATCTCTCCTGCCTTCTGAACACGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSSSVRAVKPNC*AISSLLPSEHV Trigger: CACGTGTTCAGAAGGCAGGAGAGATGAGATTGCTCAGCAGTTGGGCTTGACTGCTCTTACAGAGGAGCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | GATCGCTTTGGTTTCTTAGTGGGCTCCAGTTTGTTCTaGTCTTTCATTCCTGCGGGGACCTTGTGCGTCGGT | + |
|
Preference number: 3 (lower is better) Translates to: DRFGFLVGSSLF*SFIPAGTLCVG Trigger: ACCGACGCACAAGGTCCCCGCAGGAATGAAAGATCAGAACAAACTGGAGCCCACTAAGAAACCAAAGCGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | AAGTTGATCTCAGGCCCTCTTGCTTATGTTGCCAACTaGGCCATCTCCCCAACTCTCCTCTCTACAGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KLISGPLAYVAN*AISPTLLSTEG Trigger: CCCTTCTGTAGAGAGGAGAGTTGGGGAGATGGCTCAGTTGGCAACATAAGCAAGAGGGCCTGAGATCAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | ACTGAGCCATCTCTCCAGCCCCAGCACTGGGGTTCTTaGATGACATGGGAAGGAAATGAATCTGGGTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TEPSLQPQHWGS*MTWEGNESGSC Trigger: ACAAGACCCAGATTCATTTCCTTCCCATGTCATTCAAGAACCCCAGTGCTGGGGCTGGAGAGATGGCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTGGAACTCAGAGATCTGCCTACCTCTaGCTCTCGAGTACTAAGATTAAAGGTATGATCACC | + |
|
Preference number: 3 (lower is better) Translates to: PGWPGTQRSAYL*LSSTKIKGMIT Trigger: GGTGATCATACCTTTAATCTTAGTACTCGAGAGGCAGAGGTAGGCAGATCTCTGAGTTCCAGGCCAGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR GCA 72 bp | TTGAGGCAGGGTCTAGAAGTTGATCTCAGGCCCTCTTaGTTATGTTGCCAACTGAGCCATCTCCCCAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: LRQGLEVDLRPS*LCCQLSHLPNS Trigger: AGAGTTGGGGAGATGGCTCAGTTGGCAACATAAGCAAGAGGGCCTGAGATCAACTTCTAGACCCTGCCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | ACTAACTGTAGCAGAGGAATGGGGTGTGGGGTAACCTaGGATCGCTTTGGTTTCTTAGTGGGCTCCAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TNCSRGMGCGVT*DRFGFLVGSSL Trigger: CAAACTGGAGCCCACTAAGAAACCAAAGCGATCCCAGGTTACCCCACACCCCATTCCTCTGCTACAGTTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | GACAAAGGTTCTCTCTTCTTCCTCACTGGAAGAGGTTaGCGACCAGCTAGCCAGAGTCAGCACTGGAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: DKGSLFFLTGRG*RPASQSQHWSF Trigger: AAAACTCCAGTGCTGACTCTGGCTAGCTGGTCGCCAACCTCTTCCAGTGAGGAAGAAGAGAGAACCTTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCCTTGATGAACTCCAGTTTCAAGTATTCAGCCATCGGGAAGGTTTTGCAGAAGGTGGACTGCAGGTaGTTCAGTGCCTGGCGCATG | + |
|
Preference number: 3 (lower is better) Translates to: ISLMNSSFKYSAIGKVLQKVDCR*FSAWRM Trigger: CATGCGCCAGGCACTGAACAACCTGCAGTCCACCTT...CTGCAAAACCTTCCCGATGGCTGAATACTTGAAACTGGAGTTCATCAAGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
||
| 3UTR TCA 72 bp | GAGACCCTGTCTGCTTCTACTTCCTGGATACAGGGCTaGAAGGCACCACTGCACCTGACCTTTGGTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ETLSASTSWIQG*KAPLHLTFGLK Trigger: TTTTAAACCAAAGGTCAGGTGCAGTGGTGCCTTTCAGCCCTGTATCCAGGAAGTAGAAGCAGACAGGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | CCAGCACTCGGCAGGATCGGGAGTTCAAGGTCAGCCTaGGGTACAAGAGACTATTTTCACAGAAGAAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: PALGRIGSSRSA*GTRDYFHRRKT Trigger: TGTTTTTCTTCTGTGAAAATAGTCTCTTGTACCCCAGGCTGACCTTGAACTCCCGATCCTGCCGAGTGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | TTGCAGGAGACCAAGGTTCAATTCCCAGCACCTACATaGAGGCTCACAACTATCTGCAACTCCCTTTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LQETKVQFPAPT*RLTTICNSLSK Trigger: CTTGGAAAGGGAGTTGCAGATAGTTGTGAGCCTCCATGTAGGTGCTGGGAATTGAACCTTGGTCTCCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | CAGAGGAATGGGGTGTGGGGTAACCTGGGATCGCTTTaGTTTCTTAGTGGGCTCCAGTTTGTTCTGATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QRNGVWGNLGSL*FLSGLQFVLIF Trigger: AAAGATCAGAACAAACTGGAGCCCACTAAGAAACCAAAGCGATCCCAGGTTACCCCACACCCCATTCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR GCA 72 bp | AGGGACACAATGCACTCTTTAGGCCTTCTTAGGCACTaGATGTGTTCAGTGAGCAGGTATACATGCAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RDTMHSLGLLRH*MCSVSRYTCRQ Trigger: TTGCCTGCATGTATACCTGCTCACTGAACACATGCAGTGCCTAAGAAGGCCTAAAGAGTGCATTGTGTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR GCA 72 bp | CATTATGGGTTCTCAGAACTGGTGAGATGGCAATTCTaGCTGCTCTTGCAGGAGACCAAGGTTCAATTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: HYGFSELVRWQF*LLLQETKVQFP Trigger: TGGGAATTGAACCTTGGTCTCCTGCAAGAGCAGGCAGAATTGCCATCTCACCAGTTCTGAGAACCCATAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR GCA 72 bp | AAACCTGTGTCTGAGTATATTCCATGTGTGGGTGCCTaGAGAATTCTGGAGGCACTGGGACACTTGAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: KPVSEYIPCVGA*RILEALGHLKL Trigger: CAGTTTCAAGTGTCCCAGTGCCTCCAGAATTCTGCAGGCACCCACACATGGAATATACTCAGACACAGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | AGTACTCAGCATTATGGGTTCTCAGAACTGGTGAGATaGCAATTCTGCCTGCTCTTGCAGGAGACCAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: STQHYGFSELVR*QFCLLLQETKV Trigger: AACCTTGGTCTCCTGCAAGAGCAGGCAGAATTGCCATCTCACCAGTTCTGAGAACCCATAATGCTGAGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGACATTTGGAAGAGCAGTCAGTGCTCTTACTCCCCAGAGAATGTTaGTGGAGTCAGTTCTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: CGCWDLNSGHLEEQSVLLLPREC*WSQFSS Trigger: GGAAGAGAACTGACTCCACAAACATTCTCTGGGGAG...TAAGAGCACTGACTGCTCTTCCAAATGTCCTGAGTTCAAATCCCAGCAACCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR CAA 90 bp | GACAAAGGTTCTCTCTTCTTCCTCACTGGAAGAGGTTGGCGACCAGCTAGCCAGAAGACTACTTTTTGTTaGTTTCGAGACAGGGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DKGSLFFLTGRGWRPASQKTTFC*FRDRVS Trigger: AGAAACCCTGTCTCGAAACAAACAAAAAGTAGTCTT...CTGGCTAGCTGGTCGCCAACCTCTTCCAGTGAGGAAGAAGAGAGAACCTTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTAGCTTCAGACACTCCAGAAGAGGGCATCAGATCTTGTTACAGATGGTTGTGCTTGGCTTGTTACTaGGGTTCTGGGGAATCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TVASDTPEEGIRSCYRWLCLACY*GSGESK Trigger: TTTGGATTCCCCAGAACCCAAGTAACAAGCCAAGCA...CAACCATCTGTAACAAGATCTGATGCCCTCTTCTGGAGTGTCTGAAGCTACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | CTTGTTACTTGGGTTCTGGGGAATCCAAACTCAGGTTaGGGCTGTAGAGCACTTTACTTACTTGGAGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LVTWVLGNPNSG*GCRALYLLGGS Trigger: ACTGCCTCCAAGTAAGTAAAGTGCTCTACAGCCTCAACCTGAGTTTGGATTCCCCAGAACCCAAGTAACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | CTTGAATACATTCTCACTGTTGATATAGCCAAATCCTaGGAAGGTGGACTGCAGGTTGTTCAGTGCCTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: LEYILTVDIAKS*EGGLQVVQCLA Trigger: CGCCAGGCACTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTATATCAACAGTGAGAATGTATTCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
||
| 3UTR GCA 72 bp | GATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCAGGACATTTGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLVTDGCEPPCG*WDLNSGHLEEQ Trigger: CTGCTCTTCCAAATGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | AATGGGGCTATGCACTTCATGTCCAGCCCCCTTCCCTaGACACCACAAATTCATTCTAAGAAATGGATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: NGAMHFMSSPLP*TPQIHSKKWML Trigger: TAGCATCCATTTCTTAGAATGAATTTGTGGTGTCCAGGGAAGGGGGCTGGACATGAAGTGCATAGCCCCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | CTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACATTTGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNSGHLEEQS Trigger: TGACTGCTCTTCCAAATGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | ACCACTGCACCTGACCTTTGGTTTAAAACCTGTGTCTaGGTATATTCCATGTGTGGGTGCCTGCAGAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: TTAPDLWFKTCV*VYSMCGCLQNS Trigger: AGAATTCTGCAGGCACCCACACATGGAATATACTCAGACACAGGTTTTAAACCAAAGGTCAGGTGCAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | ATTATAGGCATGTCTTTTGAGGCAGGGTCTAGAAGTTaGTCTCAGGCCCTCTTGCTTATGTTGCCAACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: IIGMSFEAGSRS*SQALLLMLPTE Trigger: CTCAGTTGGCAACATAAGCAAGAGGGCCTGAGATCAACTTCTAGACCCTGCCTCAAAAGACATGCCTATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTAGCTTCAGACACTCCAGAAGAGGGCATCAGATCTTGTTACAGATGGTTGGAGTCGTATTTAATATaGTCAATGTCAGGGGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TVASDTPEEGIRSCYRWLESYLI*SMSGGS Trigger: GGAACCCCCTGACATTGACAATATTAAATACGACTC...CAACCATCTGTAACAAGATCTGATGCCCTCTTCTGGAGTGTCTGAAGCTACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | CTGGTGATAAACAGACATGGGGAAAGGGTTGTGACTTaGGGTAGAAGTGACAGGGCTTTGAAATTTAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LVINRHGERVVT*GRSDRALKFKD Trigger: GTCTTTAAATTTCAAAGCCCTGTCACTTCTACCCCAAGTCACAACCCTTTCCCCATGTCTGTTTATCACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | CCTACCTCTGCCTCTCGAGTACTAAGATTAAAGGTATaGTCACCATTGCCTGGCTTAAGATCAAGATTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PTSASRVLRLKV*SPLPGLRSRFL Trigger: TAAGAATCTTGATCTTAAGCCAGGCAATGGTGATCATACCTTTAATCTTAGTACTCGAGAGGCAGAGGTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR TCA 72 bp | TCAGATTACTTATGTCGACTTCTAGGACTGTTGCTATaGCTCTTTTTGTGGTTAACTGAAGTTGCTGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SDYLCRLLGLLL*LFLWLTEVAGV Trigger: GACTCCAGCAACTTCAGTTAACCACAAAAAGAGTCATAGCAACAGTCCTAGAAGTCGACATAAGTAATCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CCA 72 bp | CCCCTTCCCTGGACACCACAAATTCATTCTAAGAAATaGATGCTACAAGTTACTATATTAGAAGAAACACCT | + |
|
Preference number: 3 (lower is better) Translates to: PLPWTPQIHSKK*MLQVTILEETP Trigger: AGGTGTTTCTTCTAATATAGTAACTTGTAGCATCCATTTCTTAGAATGAATTTGTGGTGTCCAGGGAAGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGGCAGCTGGTACTGAATTTGTGGCACCCCTCTGCCTCAGCACCCCAGGTGTTCACCAGCAGGGGGTaGGGCTCGTCGCAGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRQLVLNLWHPSASAPQVFTSRG*GSSQTL Trigger: CAAGGTCTGCGACGAGCCCCACCCCCTGCTGGTGAA...CACCTGGGGTGCTGAGGCAGAGGGGTGCCACAAATTCAGTACCAGCTGCCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGGGGATGGAACTCAGGAGGCCGGGTGTGTGGCCGACACTGCTGCAGTCTCGCGTCCACGCAGTGCTaGATCATCTCCTTCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FWGWNSGGRVCGRHCCSLASTQC*IISFTS Trigger: GCTGGTGAAGGAGATGATCCAGCACTGCGTGGACGC...GAGACTGCAGCAGTGTCGGCCACACACCCGGCCTCCTGAGTTCCATCCCCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR TCA 90 bp | GGGATGCTCAAGTTTCACACCCTGGCCGTGGCTGCTCCACAGCCTGGGAGACACGATATAGCCAAATCCTaGGAAGGTGGACTGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GMLKFHTLAVAAPQPGRHDIAKS*EGGLQV Trigger: AACCTGCAGTCCACCTTCTCAGGATTTGGCTATATC...GTGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGTGTGAAACTTGAGCATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR GCA 90 bp | TATGTGGCCTTGGCTGGCATGGGACTTGATATGCAGACCACACTGGCCCTGAACAGGAGCCCAGCCATCTaGAGCAGGGAGTTCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YVALAGMGLDMQTTLALNRSPAI*SREFTP Trigger: AGGAGTGAACTCCCTGCTGCAGATGGCTGGGCTCCT...GTTCAGGGCCAGTGTGGTCTGCATATCAAGTCCCATGCCAGCCAAGGCCACATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGGCAGCTGGTACTGAATTTGTGGCACCCCTCTGCCTCAGCACCCCAGGTGCAAATCCTGAGAAGGTaGACTGCAGGTTGTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRQLVLNLWHPSASAPQVQILRR*TAGCSV Trigger: CACTGAACAACCTGCAGTCCACCTTCTCAGGATTTG...CACCTGGGGTGCTGAGGCAGAGGGGTGCCACAAATTCAGTACCAGCTGCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CCA 90 bp | TATGTGGCCTTGGCTGGCATGGGACTTGATATGCAGACCACACTGGCCCTGAACTGGCCACTGGAGCCATaGTCTTCTGACACAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YVALAGMGLDMQTTLALNWPLEP*SSDTAW Trigger: CCAGGCTGTGTCAGAAGACCATGGCTCCAGTGGCCA...GTTCAGGGCCAGTGTGGTCTGCATATCAAGTCCCATGCCAGCCAAGGCCACATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGCTTCAGACACTCCAGAAGAGGGCATCAGATCTTGTTACAGATGGTTGACAGGCGAGGGCTCCTaGGCCCCACTCTCGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVASDTPEEGIRSCYRWLTGEGS*APLSDG Trigger: CCCATCCGAGAGTGGGGCGCAGGAGCCCTCGCCTGT...CAACCATCTGTAACAAGATCTGATGCCCTCTTCTGGAGTGTCTGAAGCTACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGACATTTGGAAGAGCAGTCAGTGCTCTTAAGTGGCCGGCGGTCTTaGTGGGGACAGGCGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CGCWDLNSGHLEEQSVLLSGRRS*WGQARA Trigger: AGCCCTCGCCTGTCCCCAGCAAGACCGCCGGCCACT...TAAGAGCACTGACTGCTCTTCCAAATGTCCTGAGTTCAAATCCCAGCAACCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCTCTCGAGTACTAAGATTAAAGGTATGATCACCATTGCCTGGCTTAAGGGCCGGCGGTCTTGCTaGGGACAGGCGAGGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLSSTKIKGMITIAWLKGRRSC*GQARAP Trigger: AGGAGCCCTCGCCTGTCCCCAGCAAGACCGCCGGCC...CTTAAGCCAGGCAATGGTGATCATACCTTTAATCTTAGTACTCGAGAGGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CCA 90 bp | GACAAAGGTTCTCTCTTCTTCCTCACTGGAAGAGGTTGGCGACCAGCTAGCCAGAGGTTGTTCAGTGCCTaGCGCATGTCTCCCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DKGSLFFLTGRGWRPASQRLFSA*RMSPWA Trigger: AGCCCAGGGAGACATGCGCCAGGCACTGAACAACCT...CTGGCTAGCTGGTCGCCAACCTCTTCCAGTGAGGAAGAAGAGAGAACCTTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CAA 72 bp | CAGAGCCCCAACCCTCAAGTGATGCCCTGGACTTCTTaGGGGGCAAAGCAAGTGCCCAGAGGATATAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: QSPNPQVMPWTS*GAKQVPRGYRL Trigger: CAGTCTATATCCTCTGGGCACTTGCTTTGCCCCCAAAGAAGTCCAGGGCATCACTTGAGGGTTGGGGCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR GCA 90 bp | CTTATGTTGCCAACTGAGCCATCTCCCCAACTCTCCTCTCTACAGAAGGGCCCGGGGCACCGTCCGTCATaGTGTCTGCTTCATCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LMLPTEPSPQLSSLQKGPGHRPS*CLLHLE Trigger: TTCTAGATGAAGCAGACAGCATGACGGACGGTGCCC...CGGGCCCTTCTGTAGAGAGGAGAGTTGGGGAGATGGCTCAGTTGGCAACATAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CCA 90 bp | TATGTGGCCTTGGCTGGCATGGGACTTGATATGCAGACCACACTGGCCCTGAACCCAAGCAGAGGATGCTaGTTGTCTTGCCAGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YVALAGMGLDMQTTLALNPSRGC*LSCQFL Trigger: CAGGAACTGGCAAGACAACCAGCATCCTCTGCTTGG...GTTCAGGGCCAGTGTGGTCTGCATATCAAGTCCCATGCCAGCCAAGGCCACATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGTCCAGAGAGGAATGGGGCTATGCACTTCATGTCCAGCCCCCTTCCCTGGCCGTCATCTGTGTATaGCACCTTTTCCTTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRSREEWGYALHVQPPSLAVICV*HLFLLD Trigger: ATCGAGAAGGAAAAGGTGCCATACACAGATGACGGC...CAGGGAAGGGGGCTGGACATGAAGTGCATAGCCCCATTCCTCTCTGGACCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CAA 72 bp | GGTCAGAGCTTTCCCAGCATGCCCCATGTCCAGGGCTaGAATTCACACAGAAGAGCAGAGGTGTGTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQSFPSMPHVQG*NSHRRAEVCHF Trigger: GAAGTGACACACCTCTGCTCTTCTGTGTGAATTCAAGCCCTGGACATGGGGCATGCTGGGAAAGCTCTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CAA 72 bp | AGAGAATGTTTGTGGAGTCAGTTCTCTTCCACCTGCTaGTGGGTTCTGGGGATGGAACTCAGGAGGCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RECLWSQFSSTC*WVLGMELRRPG Trigger: ACCCGGCCTCCTGAGTTCCATCCCCAGAACCCACAAGCAGGTGGAAGAGAACTGACTCCACAAACATTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CAA 72 bp | CAAACTCAGGTTGAGGCTGTAGAGCACTTTACTTACTaGGAGGCAGTCAGAGGACAGCTGTGGCGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QTQVEAVEHFTY*EAVRGQLWRWL Trigger: GAGCCAGCGCCACAGCTGTCCTCTGACTGCCTCCAAGTAAGTAAAGTGCTCTACAGCCTCAACCTGAGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGCTTCAGACACTCCAGAAGAGGGCATCAGATCTTGTTACAGATGGTTGGGAGCCATGGTCTTCTaGCACAGCCTGGCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVASDTPEEGIRSCYRWLGAMVF*HSLARS Trigger: GCTCCTGGCCAGGCTGTGTCAGAAGACCATGGCTCC...CAACCATCTGTAACAAGATCTGATGCCCTCTTCTGGAGTGTCTGAAGCTACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGTCCAGAGAGGAATGGGGCTATGCACTTCATGTCCAGCCCCCTTCCCTGGGAAGGGTGACTTTCTaGTGGGCGAACATTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LRSREEWGYALHVQPPSLGRVTF*WANILI Trigger: AATCAAAATGTTCGCCCAGCAGAAAGTCACCCTTCC...CAGGGAAGGGGGCTGGACATGAAGTGCATAGCCCCATTCCTCTCTGGACCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CAA 72 bp | TGCAGTCTCACTGGCCCCAGGGCACCCTTTCTAATATaGGGGTTCAACAGGCAGGAGAAAGACGCTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSLTGPRAPFLI*GFNRQEKDAGF Trigger: AAAACCAGCGTCTTTCTCCTGCCTGTTGAACCCCAATATTAGAAAGGGTGCCCTGGGGCCAGTGAGACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CAA 72 bp | AGTGCTGGGATTAAAGGCGGGCTCCCCAGAGAATGTTaGTGGAGTCAGTTCTCTTCCACCTGCTTGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SAGIKGGLPREC*WSQFSSTCLWV Trigger: AACCCACAAGCAGGTGGAAGAGAACTGACTCCACAAACATTCTCTGGGGAGCCCGCCTTTAATCCCAGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CAA 72 bp | GACCACAGACATCTGTCCCTGTGCTTGGCTTGTTACTaGGGTTCTGGGGAATCCAAACTCAGGTTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DHRHLSLCLACY*GSGESKLRLRL Trigger: CAGCCTCAACCTGAGTTTGGATTCCCCAGAACCCAAGTAACAAGCCAAGCACAGGGACAGATGTCTGTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CAA 72 bp | CCTGTGAGTGTGAGAGCAGGCGCTGCACACATGCCTTaGTTTAAACACCTTCCCCTGTGTGTTCATAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVSVRAGAAHMP*FKHLPLCVHRA Trigger: AGCCCTATGAACACACAGGGGAAGGTGTTTAAACAAAGGCATGTGTGCAGCGCCTGCTCTCACACTCACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGCTTCAGACACTCCAGAAGAGGGCATCAGATCTTGTTACAGATGGTTGTTTCCATGGTTCTCCTaGGGGCCTGCTGGGCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: TVASDTPEEGIRSCYRWLFPWFS*GPAGHR Trigger: ACGGTGCCCAGCAGGCCCTCAGGAGAACCATGGAAA...CAACCATCTGTAACAAGATCTGATGCCCTCTTCTGGAGTGTCTGAAGCTACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGACATTTGGAAGAGCAGTCAGTGCTCTTAGGACCTGAGCGTCAGTaGGCTTGGTGTAGCGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGCWDLNSGHLEEQSVLLGPERQ*AWCSGA Trigger: TGCTCCGCTACACCAAGCTCACTGACGCTCAGGTCC...TAAGAGCACTGACTGCTCTTCCAAATGTCCTGAGTTCAAATCCCAGCAACCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGCTTCAGACACTCCAGAAGAGGGCATCAGATCTTGTTACAGATGGTTGATTGAGTTCCAGGACTaGGTCCTTCAGGGCGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVASDTPEEGIRSCYRWLIEFQD*VLQGGA Trigger: GGCCCCGCCCTGAAGGACGCAGTCCTGGAACTCAAT...CAACCATCTGTAACAAGATCTGATGCCCTCTTCTGGAGTGTCTGAAGCTACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGCCTCTCGAGTACTAAGATTAAAGGTATGATCACCATTGCCTGGCTTAAGAGCCTGGTGAGGACCTaGGCGTCAGTGAGCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCLSSTKIKGMITIAWLKSLVRT*ASVSLV Trigger: CACCAAGCTCACTGACGCTCAGGTCCTCACCAGGCT...CTTAAGCCAGGCAATGGTGATCATACCTTTAATCTTAGTACTCGAGAGGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR GCA 90 bp | TTCATGTCCAGCCCCCTTCCCTGGACACCACAAATTCATTCTAAGAAATGGATGCTGCAGGTTGTTCAGTaGCTGGCGCATGTCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FMSSPLPWTPQIHSKKWMLQVVQ*LAHVSL Trigger: CAGGGAGACATGCGCCAGGCACTGAACAACCTGCAG...CATCCATTTCTTAGAATGAATTTGTGGTGTCCAGGGAAGGGGGCTGGACATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGACATTTGGAAGAGCAGTCAGTGCTCTTAAGGCCTCGTCAATGTTaGCGTCCACGCAGTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CGCWDLNSGHLEEQSVLLRPRQC*RPRSAG Trigger: TCCAGCACTGCGTGGACGCCAACATTGACGAGGCCT...TAAGAGCACTGACTGCTCTTCCAAATGTCCTGAGTTCAAATCCCAGCAACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CCA 90 bp | GTATGGCACCTTTTCCTTCTCGATGACATTCATGAGCCTGGTGAGGACCTGAGCGACACCTGTATCAAGTaGCTCACAACTGCCTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: VWHLFLLDDIHEPGEDLSDTCIK*LTTACT Trigger: GGTACAGGCAGTTGTGAGCCACTTGATACAGGTGTC...GCTCAGGTCCTCACCAGGCTCATGAATGTCATCGAGAAGGAAAAGGTGCCATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
||
| 3UTR CAA 72 bp | GTGCTAGGACCACAGACATCTGTCCCTGTGCTTGGCTaGTTACTTGGGTTCTGGGGAATCCAAACTCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLGPQTSVPVLG*LLGFWGIQTQV Trigger: AACCTGAGTTTGGATTCCCCAGAACCCAAGTAACAAGCCAAGCACAGGGACAGATGTCTGTGGTCCTAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAGGCGCTGCACACATGCCTTTGTTTAAACACCTTCCCCTGTGTGTTCATACACATTGCCTTCTCTTaGAAAGACCTCCAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQALHTCLCLNTFPCVFIHIAFS*KDLQPA Trigger: AGCAGGCTGGAGGTCTTTGCAAGAGAAGGCAATGTG...TATGAACACACAGGGGAAGGTGTTTAAACAAAGGCATGTGTGCAGCGCCTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAACTGCCCCCTCACCAAACACCAATAAACCCTGTGAGTGTGAGAGCAGGAGAATGATGATCTTGTaGCGGCCCTTGGGAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NKTAPSPNTNKPCECESRRMMIL*RPLGRV Trigger: CACCCTTCCCAAGGGCCGGCACAAGATCATCATTCT...CCTGCTCTCACACTCACAGGGTTTATTGGTGTTTGGTGAGGGGGCAGTTTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CAA 72 bp | TTCTCAGAACTGGTGAGATGGCAATTCTGCCTGCTCTaGCAGGAGACCAAGGTTCAATTCCCAGCACCTACA | + |
|
Preference number: 4 (lower is better) Translates to: FSELVRWQFCLL*QETKVQFPAPT Trigger: TGTAGGTGCTGGGAATTGAACCTTGGTCTCCTGCAAGAGCAGGCAGAATTGCCATCTCACCAGTTCTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACATTTGGAAGAGCAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGHLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAAATGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAACTGCCCCCTCACCAAACACCAATAAACCCTGTGAGTGTGAGAGCAGGCAAAGACCTCCAGCCTaGTCACAGTGTCTTCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: NKTAPSPNTNKPCECESRQRPPA*SQCLHC Trigger: GCAATGAAGACACTGTGAGCAGGCTGGAGGTCTTTG...CCTGCTCTCACACTCACAGGGTTTATTGGTGTTTGGTGAGGGGGCAGTTTTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CCA 90 bp | TATCCAATCTCCTTGATGAACTCCAGTTTCAAGTATTCAGCCATCGGGAAGGTTCACAGCGGGACTGGATaGGCTAGAGTGAAGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: YPISLMNSSFKYSAIGKVHSGTG*ARVKDT Trigger: GGTGTCCTTCACTCTAGCCCATCCAGTCCCGCTGTG...AACCTTCCCGATGGCTGAATACTTGAAACTGGAGTTCATCAAGGAGATTGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
||
| CDS-3UTR CCA 90 bp | TATGTGGCCTTGGCTGGCATGGGACTTGATATGCAGACCACACTGGCCCTGAACTTCGTTGAGCTTCAATaGTCTGTATTTTTCAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: YVALAGMGLDMQTTLALNFVELQ*SVFFNP Trigger: TGGGTTGAAAAATACAGACCATTGAAGCTCAACGAA...GTTCAGGGCCAGTGTGGTCTGCATATCAAGTCCCATGCCAGCCAAGGCCACATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR TCA 90 bp | GGTATGATCACCATTGCCTGGCTTAAGATCAAGATTCTTAGTAGAAATGACCCTGATGACATCTTCTGGTaGGTAGCCCAGGTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GMITIAWLKIKILSRNDPDDIFW*VAQVPQ Trigger: CTGTGGCACCTGGGCTACTCACCAGAAGATGTCATC...AGGGTCATTTCTACTAAGAATCTTGATCTTAAGCCAGGCAATGGTGATCATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR GCA 90 bp | CTACAAGTTACTATATTAGAAGAAACACCTAGAACCCAGCTGTTAGACACCGACCCTGAGAAGGTGGACTaGAGGTTGTTCAGTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQVTILEETPRTQLLDTDPEKVD*RLFSAW Trigger: CCAGGCACTGAACAACCTGCAGTCCACCTTCTCAGG...GTCGGTGTCTAACAGCTGGGTTCTAGGTGTTTCTTCTAATATAGTAACTTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR TCA 90 bp | GGTATGATCACCATTGCCTGGCTTAAGATCAAGATTCTTAGTAGAAATGACCCTGATGCCCCTGTCATTTaGGGCATTGAGTTCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GMITIAWLKIKILSRNDPDAPVI*GIEFQD Trigger: GTCCTGGAACTCAATGCCTCAAATGACAGGGGCATC...AGGGTCATTTCTACTAAGAATCTTGATCTTAAGCCAGGCAATGGTGATCATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR TCA 90 bp | CACAATATGTTCCCTGGTGATAAACAGACATGGGGAAAGGGTTGTGACTTGGGGACTGGATGGGCTCTATaGTTTTGTCTGAAGCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: HNMFPGDKQTWGKGCDLGTGWAL*FCLKHY Trigger: GTAATGCTTCAGACAAAATCATAGAGCCCATCCAGT...CCCCAAGTCACAACCCTTTCCCCATGTCTGTTTATCACCAGGGAACATATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR GCA 90 bp | TATCCAATCTCCTTGATGAACTCCAGTTTCAAGTATTCAGCCATCGGGAAGGTTCAAGTGGCTCACAACTaGCTGTACCCTAATTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YPISLMNSSFKYSAIGKVQVAHN*LYPNSR Trigger: CCTGGAATTAGGGTACAGGCAGTTGTGAGCCACTTG...AACCTTCCCGATGGCTGAATACTTGAAACTGGAGTTCATCAAGGAGATTGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
||
| CDS-3UTR CCA 90 bp | CTACAAGTTACTATATTAGAAGAAACACCTAGAACCCAGCTGTTAGACACCGACACCGCACAGCGGGACTaGATGGGCTCTATGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQVTILEETPRTQLLDTDTAQRD*MGSMIL Trigger: CAAAATCATAGAGCCCATCCAGTCCCGCTGTGCGGT...GTCGGTGTCTAACAGCTGGGTTCTAGGTGTTTCTTCTAATATAGTAACTTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAGGCGCTGCACACATGCCTTTGTTTAAACACCTTCCCCTGTGTGTTCATAATACATTCTCACTGTTaGTATAGCCAAATCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EQALHTCLCLNTFPCVFIIHSHC*YSQILR Trigger: TCTCAGGATTTGGCTATATCAACAGTGAGAATGTAT...TATGAACACACAGGGGAAGGTGTTTAAACAAAGGCATGTGTGCAGCGCCTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR TCA 90 bp | TACCTCTGCCTCTCGAGTACTAAGATTAAAGGTATGATCACCATTGCCTGGCTTGCTGGGCGAACATTTTaGTTTTATTCCTCACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: YLCLSSTKIKGMITIAWLAGRTF*FYSSPH Trigger: ATGTGGTGAGGAATAAAATCAAAATGTTCGCCCAGC...AAGCCAGGCAATGGTGATCATACCTTTAATCTTAGTACTCGAGAGGCAGAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR TCA 90 bp | TACCTCTGCCTCTCGAGTACTAAGATTAAAGGTATGATCACCATTGCCTGGCTTCTCTATGATTTTGTCTaGAGCATTACACGCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YLCLSSTKIKGMITIAWLLYDFV*SITRQS Trigger: GCTTTGGCGTGTAATGCTTCAGACAAAATCATAGAG...AAGCCAGGCAATGGTGATCATACCTTTAATCTTAGTACTCGAGAGGCAGAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR TCA 90 bp | GGTATGATCACCATTGCCTGGCTTAAGATCAAGATTCTTAGTAGAAATGACCCTTCCGCCACTTTCATGTaGGTGTATCCAATCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GMITIAWLKIKILSRNDPSATFM*VYPISL Trigger: CAAGGAGATTGGATACACTCACATGAAAGTGGCGGA...AGGGTCATTTCTACTAAGAATCTTGATCTTAAGCCAGGCAATGGTGATCATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR GCA 90 bp | CTACAAGTTACTATATTAGAAGAAACACCTAGAACCCAGCTGTTAGACACCGACCCATCGGGAAGGTTTTaGAGACTCGGAAAATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQVTILEETPRTQLLDTDPSGRF*RLGKCC Trigger: GCAACATTTTCCGAGTCTGCAAAACCTTCCCGATGG...GTCGGTGTCTAACAGCTGGGTTCTAGGTGTTTCTTCTAATATAGTAACTTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS CCA 90 bp | TGTATTTTTCAACCCACGGCAGCTCGTAGTGGCCGGCGGTCTTGCTaGGGACAGGCGAGGGCTCCTGCGCCCCACTCTCGGATGGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CIFQPTAARSGRRSC*GQARAPAPHSRMGH Trigger: GTGACCCATCCGAGAGTGGGGCGCAGGAGCCCTCGCCTGTCCCCAGCAAGACCGCCGGCCACTACGAGCTGCCGTGGGTTGAAAAATACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTGGGTTCTGGGGATGGAACTCAGGAGGCCGGGTGTGTGGCCGACACTGCTAGGATGCTGGTTGTCTaGCCAGTTCCTGGGGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: LVGSGDGTQEAGCVADTARMLVV*PVPGGP Trigger: TGGTCCCCCAGGAACTGGCAAGACAACCAGCATCCT...AGCAGTGTCGGCCACACACCCGGCCTCCTGAGTTCCATCCCCAGAACCCACAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CAA 90 bp | GGGATGCTCAAGTTTCACACCCTGGCCGTGGCTGCTCCACAGCCTGGGAGACACTCTAGAATGATGATCTaGTGCCGGCCCTTGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GMLKFHTLAVAAPQPGRHSRMMI*CRPLGR Trigger: CCTTCCCAAGGGCCGGCACAAGATCATCATTCTAGA...GTGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGTGTGAAACTTGAGCATCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTTCTTCCTCACTGGAAGAGGTTGGCGACCAGCTAGCCAGAGTCAGCACAGCAGAGGATGCTGGTaGTCTTGCCAGTTCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLFFLTGRGWRPASQSQHSRGCW*SCQFLG Trigger: CCCCAGGAACTGGCAAGACAACCAGCATCCTCTGCT...GTGCTGACTCTGGCTAGCTGGTCGCCAACCTCTTCCAGTGAGGAAGAAGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGCTCTTGCAGGAGACCAAGGTTCAATTCCCAGCACCTACATGGAGGCTCAATCTTGTGCCGGCCCTaGGGAAGGGTGACTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ACSCRRPRFNSQHLHGGSILCRP*GRVTFC Trigger: GCAGAAAGTCACCCTTCCCAAGGGCCGGCACAAGAT...TGAGCCTCCATGTAGGTGCTGGGAATTGAACCTTGGTCTCCTGCAAGAGCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS TCA 90 bp | GCTTGGTGTAGCGGAGCACCGCACAGCGGGACTGGATGGGCTCTATaGTTTTGTCTGAAGCATTACACGCCAAAGCGAATCGGGTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AWCSGAPHSGTGWAL*FCLKHYTPKRIGSS Trigger: AGACGACCCGATTCGCTTTGGCGTGTAATGCTTCAGACAAAATCATAGAGCCCATCCAGTCCCGCTGTGCGGTGCTCCGCTACACCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CAA 90 bp | TATGTGGCCTTGGCTGGCATGGGACTTGATATGCAGACCACACTGGCCCTGAACGCACATTGCCTTCTCTaGCAAAGACCTCCAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YVALAGMGLDMQTTLALNAHCLL*QRPPAC Trigger: GCAGGCTGGAGGTCTTTGCAAGAGAAGGCAATGTGC...GTTCAGGGCCAGTGTGGTCTGCATATCAAGTCCCATGCCAGCCAAGGCCACATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS TCA 90 bp | GCGGAGCACCGCACAGCGGGACTGGATGGGCTCTATGATTTTGTCTaGAGCATTACACGCCAAAGCGAATCGGGTCGTCTTCGAGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: AEHRTAGLDGLYDFV*SITRQSESGRLRVD Trigger: ATCTACTCGAAGACGACCCGATTCGCTTTGGCGTGTAATGCTTCAGACAAAATCATAGAGCCCATCCAGTCCCGCTGTGCGGTGCTCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
||
| CDS-3UTR CAA 90 bp | GGGATGCTCAAGTTTCACACCCTGGCCGTGGCTGCTCCACAGCCTGGGAGACACTGCTGGGCGAACATTTaGATTTTATTCCTCACCACA | + |
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Preference number: 5 (lower is better) Translates to: GMLKFHTLAVAAPQPGRHCWANI*ILFLTT Trigger: TGTGGTGAGGAATAAAATCAAAATGTTCGCCCAGCA...GTGTCTCCCAGGCTGTGGAGCAGCCACGGCCAGGGTGTGAAACTTGAGCATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| CDS CCA 90 bp | CACAGCGGGACTGGATGGGCTAGAGTGAAGGACACCTGTATCAAGTaGCTCACAACTGCCTGTACCCTAATTCCAGGGCACGCATATTCA | + |
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Preference number: 5 (lower is better) Translates to: HSGTGWARVKDTCIK*LTTACTLIPGHAYS Trigger: TGAATATGCGTGCCCTGGAATTAGGGTACAGGCAGTTGTGAGCCACTTGATACAGGTGTCCTTCACTCTAGCCCATCCAGTCCCGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
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| CDS-3UTR CAA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGACATTTGGAAGAGCAGTCAGTGCTCTTAAAGGTGGACTGCAGGTaGTTCAGTGCCTGGCGCATG | + |
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Preference number: 5 (lower is better) Translates to: CGCWDLNSGHLEEQSVLLKVDCR*FSAWRM Trigger: CATGCGCCAGGCACTGAACAACCTGCAGTCCACCTT...TAAGAGCACTGACTGCTCTTCCAAATGTCCTGAGTTCAAATCCCAGCAACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| CDS TCA 90 bp | GTCGCAGACCTTGAATACATTCTCACTGTTGATATAGCCAAATCCTaGGAAGGTGGACTGCAGGTTGTTCAGTGCCTGGCGCATGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: VADLEYILTVDIAKS*EGGLQVVQCLAHVS Trigger: GGAGACATGCGCCAGGCACTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTATATCAACAGTGAGAATGTATTCAAGGTCTGCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| CDS-3UTR CAA 90 bp | CACAATATGTTCCCTGGTGATAAACAGACATGGGGAAAGGGTTGTGACTTGGGGGGCTCGTCGCAGACCTaGAATACATTCTCACTGTTG | + |
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Preference number: 5 (lower is better) Translates to: HNMFPGDKQTWGKGCDLGGSSQT*NTFSLL Trigger: CAACAGTGAGAATGTATTCAAGGTCTGCGACGAGCC...CCCCAAGTCACAACCCTTTCCCCATGTCTGTTTATCACCAGGGAACATATTGTG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| CDS-3UTR CAA 90 bp | TACCTCTGCCTCTCGAGTACTAAGATTAAAGGTATGATCACCATTGCCTGGCTTCTGTCATTTGAGGCATaGAGTTCCAGGACTGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: YLCLSSTKIKGMITIAWLLSFEA*SSRTAS Trigger: GGACGCAGTCCTGGAACTCAATGCCTCAAATGACAG...AAGCCAGGCAATGGTGATCATACCTTTAATCTTAGTACTCGAGAGGCAGAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| CDS-3UTR CAA 90 bp | TTCATGTCCAGCCCCCTTCCCTGGACACCACAAATTCATTCTAAGAAATGGATGCCAGCAATGATGATATaGGGCACATTGCCTTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: FMSSPLPWTPQIHSKKWMPAMMI*GTLPSL Trigger: AAGAGAAGGCAATGTGCCCAATATCATCATTGCTGG...CATCCATTTCTTAGAATGAATTTGTGGTGTCCAGGGAAGGGGGCTGGACATGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| CDS-3UTR CAA 90 bp | CTACAAGTTACTATATTAGAAGAAACACCTAGAACCCAGCTGTTAGACACCGACCAGACTCGGAAAATGTaGCCGATGACATCTTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: LQVTILEETPRTQLLDTDQTRKM*PMTSSG Trigger: ACCAGAAGATGTCATCGGCAACATTTTCCGAGTCTG...GTCGGTGTCTAACAGCTGGGTTCTAGGTGTTTCTTCTAATATAGTAACTTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| CDS CCA 72 bp | CAACCCACGGCAGCTCGTAGTGGCCGGCGGTCTTGCTaGGGACAGGCGAGGGCTCCTGCGCCCCACTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: QPTAARSGRRSC*GQARAPAPHSR Trigger: CCGAGAGTGGGGCGCAGGAGCCCTCGCCTGTCCCCAGCAAGACCGCCGGCCACTACGAGCTGCCGTGGGTTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| CDS GCA 72 bp | TGGCCGGCGGTCTTGCTGGGGACAGGCGAGGGCTCCTaGGCCCCACTCTCGGATGGGTCACAGCCACTCTCC | + |
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Preference number: 6 (lower is better) Translates to: WPAVLLGTGEGS*APLSDGSQPLS Trigger: GGAGAGTGGCTGTGACCCATCCGAGAGTGGGGCGCAGGAGCCCTCGCCTGTCCCCAGCAAGACCGCCGGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| CDS GCA 72 bp | TTTCAACCCACGGCAGCTCGTAGTGGCCGGCGGTCTTaGTGGGGACAGGCGAGGGCTCCTGCGCCCCACTCT | + |
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Preference number: 6 (lower is better) Translates to: FQPTAARSGRRS*WGQARAPAPHS Trigger: AGAGTGGGGCGCAGGAGCCCTCGCCTGTCCCCAGCAAGACCGCCGGCCACTACGAGCTGCCGTGGGTTGAAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| CDS TCA 72 bp | TCCTCACCACATCGATGCCCCTGTCATTTGAGGCATTaGGTTCCAGGACTGCGTCCTTCAGGGCGGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SSPHRCPCHLRH*VPGLRPSGRGP Trigger: TGGGCCCCGCCCTGAAGGACGCAGTCCTGGAACTCAATGCCTCAAATGACAGGGGCATCGATGTGGTGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| CDS TCA 72 bp | GCGGAGCACCGCACAGCGGGACTGGATGGGCTAGAGTaGAGGACACCTGTATCAAGTGGCTCACAACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: AEHRTAGLDGLE*RTPVSSGSQLP Trigger: AGGCAGTTGTGAGCCACTTGATACAGGTGTCCTTCACTCTAGCCCATCCAGTCCCGCTGTGCGGTGCTCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
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| CDS CCA 72 bp | GCTTGGTGTAGCGGAGCACCGCACAGCGGGACTGGATaGGCTAGAGTGAAGGACACCTGTATCAAGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: AWCSGAPHSGTG*ARVKDTCIKWL Trigger: GAGCCACTTGATACAGGTGTCCTTCACTCTAGCCCATCCAGTCCCGCTGTGCGGTGCTCCGCTACACCAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
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| CDS CAA 72 bp | TTCCTCACCACATCGATGCCCCTGTCATTTGAGGCATaGAGTTCCAGGACTGCGTCCTTCAGGGCGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: FLTTSMPLSFEA*SSRTASFRAGP Trigger: GGGCCCCGCCCTGAAGGACGCAGTCCTGGAACTCAATGCCTCAAATGACAGGGGCATCGATGTGGTGAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| CDS TCA 72 bp | ATCGGGTCGTCTTCGAGTAGATTTCCATGGTTCTCCTaGGGGCCTGCTGGGCACCGTCCGTCATGCTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: IGSSSSRFPWFS*GPAGHRPSCCL Trigger: CAGACAGCATGACGGACGGTGCCCAGCAGGCCCTCAGGAGAACCATGGAAATCTACTCGAAGACGACCCGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| CDS TCA 72 bp | CGCACAGCGGGACTGGATGGGCTCTATGATTTTGTCTaGAGCATTACACGCCAAAGCGAATCGGGTCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: RTAGLDGLYDFV*SITRQSESGRL Trigger: AAGACGACCCGATTCGCTTTGGCGTGTAATGCTTCAGACAAAATCATAGAGCCCATCCAGTCCCGCTGTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023867.8 |
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| CDS CCA 72 bp | ACTGGATGGGCTAGAGTGAAGGACACCTGTATCAAGTaGCTCACAACTGCCTGTACCCTAATTCCAGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: TGWARVKDTCIK*LTTACTLIPGH Trigger: GTGCCCTGGAATTAGGGTACAGGCAGTTGTGAGCCACTTGATACAGGTGTCCTTCACTCTAGCCCATCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201258.4 |
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