Pregenerated sensors for REXO5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030924Ensembl transcript IDs: ENSMUST00000033218.15, ENSMUST00000084644.3, ENSMUST00000106520.9, ENSMUST00000133758.9, ENSMUST00000207042.2, ENSMUST00000208789.2
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTaGAATGGCACTTGGAAAGTGCAGAGACTCACACTCTCACGCCTG | + |
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Preference number: 1 (lower is better) Translates to: SQSYLKEGEACHHCM*NGTWKVQRLTLSRL Trigger: CAGGCGTGAGAGTGTGAGTCTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000133758.9 ENSMUST00000208789.2 |
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| 3UTR CCA 90 bp | AAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATaGCACTTGGAAAGTGCAGAGACTCACACTCTCACGCCTGGGGTA | + |
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Preference number: 1 (lower is better) Translates to: KLSERGRGLPSLHVK*HLESAETHTLTPGV Trigger: TACCCCAGGCGTGAGAGTGTGAGTCTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000133758.9 ENSMUST00000208789.2 |
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| 3UTR GCA 90 bp | CTTCTTTGGCCCGTACTTAAGAAAATACTGAAGCAGCTCAAGAGCTaGTCTAGCATCTTCTATGCCATCCCGGCCAAGCTTGTTAGGACA | + |
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Preference number: 1 (lower is better) Translates to: LLWPVLKKILKQLKS*SSIFYAIPAKLVRT Trigger: TGTCCTAACAAGCTTGGCCGGGATGGCATAGAAGATGCTAGAGCAGCTCTTGAGCTGCTTCAGTATTTTCTTAAGTACGGGCCAAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR TCA 90 bp | AGATTGAACTCTGCAATCTTCTTTGGCCCGTACTTAAGAAAATACTaGAGCAGCTCAAGAGCTGCTCTAGCATCTTCTATGCCATCCCGG | + |
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Preference number: 1 (lower is better) Translates to: RLNSAIFFGPYLRKY*SSSRAALASSMPSR Trigger: CCGGGATGGCATAGAAGATGCTAGAGCAGCTCTTGAGCTGCTTCAGTATTTTCTTAAGTACGGGCCAAAGAAGATTGCAGAGTTCAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR TCA 90 bp | AGCCCCGACGTTACAATCTTTGCTAAATGGCCCAGCATAGACAGTTaGCATTTGTGTCCACTTGGTCTTCATACTGTTTTTCATCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: SPDVTIFAKWPSIDS*HLCPLGLHTVFHLL Trigger: GAGGAGATGAAAAACAGTATGAAGACCAAGTGGACACAAATGTCAACTGTCTATGCTGGGCCATTTAGCAAAGATTGTAACGTCGGGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR TCA 90 bp | TTGTATAGAGAAGTAAGGCCTGTAAGTTTCAAGAACAAGAGTGATTaGGTGTACTGGGCCCAAGCTACTAAACACCTTCTTCAGAGCCCC | + |
|
Preference number: 1 (lower is better) Translates to: LYREVRPVSFKNKSD*VYWAQATKHLLQSP Trigger: GGGGCTCTGAAGAAGGTGTTTAGTAGCTTGGGCCCAGTACACTCAATCACTCTTGTTCTTGAAACTTACAGGCCTTACTTCTCTATACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR GCA 90 bp | TCACCAATTCCAGCCACATATATAGTACCTTGGTTCTCCGAATCTTaGTCTAGCTCTCTTACAAGGGTGTCACACTCAAGGGTAAGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: SPIPATYIVPWFSES*SSSLTRVSHSRVSS Trigger: TGAACTTACCCTTGAGTGTGACACCCTTGTAAGAGAGCTAGAGCAAGATTCGGAGAACCAAGGTACTATATATGTGGCTGGAATTGGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR CCA 90 bp | TGTTCTTTAAAGGTTTCACCAATTCCAGCCACATATATAGTACCTTaGTTCTCCGAATCTTGCTCTAGCTCTCTTACAAGGGTGTCACAC | + |
|
Preference number: 1 (lower is better) Translates to: CSLKVSPIPATYIVP*FSESCSSSLTRVSH Trigger: GTGTGACACCCTTGTAAGAGAGCTAGAGCAAGATTCGGAGAACCAAGGTACTATATATGTGGCTGGAATTGGTGAAACCTTTAAAGAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR TCA 90 bp | ATTTTGAACATGACAATATACTTTAGAGGGTATCCCAAAGCTATCTaGAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTT | + |
|
Preference number: 1 (lower is better) Translates to: ILNMTIYFRGYPKAI*KRERLAIIACEMAL Trigger: AAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGTATATTGTCATGTTCAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000133758.9 ENSMUST00000207042.2 ENSMUST00000208789.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAGGAGGCAGAAGGTGCCTaGGCTCAGGCTGTGGTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: RGRGLPSLHVKWHLESAEEAEGA*AQAVVE Trigger: CTCTACCACAGCCTGAGCCCAGGCACCTTCTGCCTC...CTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208789.2 |
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| 3UTR CAA 90 bp | TCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTaGGAAAGTGCAGAGACTCACACTCTCACGCCTGGGGTATCACTT | + |
|
Preference number: 2 (lower is better) Translates to: SERGRGLPSLHVKWH*ESAETHTLTPGVSL Trigger: AAGTGATACCCCAGGCGTGAGAGTGTGAGTCTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000133758.9 ENSMUST00000208789.2 |
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| 3UTR CAA 90 bp | GAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATaGCATGTGAAATGGCACTTGGAAAGTGCAGAGACTCACACTCTC | + |
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Preference number: 2 (lower is better) Translates to: EGIPKLSERGRGLPS*HVKWHLESAETHTL Trigger: GAGAGTGTGAGTCTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000133758.9 ENSMUST00000208789.2 |
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| 3UTR CAA 90 bp | TTAACCTCTTTAGGCAGGATCACAGCTTCCAGGTCAGGGAAGAGGTaGGACTGCTCCAACAGGTGTTCTTTAAAGGTTTCACCAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: LTSLGRITASRSGKR*DCSNRCSLKVSPIP Trigger: TGGAATTGGTGAAACCTTTAAAGAACACCTGTTGGAGCAGTCCAACCTCTTCCCTGACCTGGAAGCTGTGATCCTGCCTAAAGAGGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTTAAAGGTTTCACCAATTCCAGCCACATATATAGTACCTTGGTTCTCCGAATTGTCTCCTTGCTCCTaGTTGGCTGCTAGTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SLKVSPIPATYIVPWFSELSPCS*LAASAS Trigger: GGAGGCACTAGCAGCCAATCAGGAGCAAGGAGACAA...TTCGGAGAACCAAGGTACTATATATGTGGCTGGAATTGGTGAAACCTTTAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCAAGCTACTAAACACCTTCTTCAGAGCCCCGACGTTACAATCTTTGCTAAAACTTCCACCCTGGCCTaGTCAAGCACCTTTTTATTT | + |
|
Preference number: 2 (lower is better) Translates to: AQATKHLLQSPDVTIFAKTSTLA*SSTFLF Trigger: AAATAAAAAGGTGCTTGAGCAGGCCAGGGTGGAAGT...TTTAGCAAAGATTGTAACGTCGGGGCTCTGAAGAAGGTGTTTAGTAGCTTGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR-3UTR TCA 90 bp | TCACAGTCAAGTCCAAAGAGGGGACTGCTATCTGTTATGAAACCAGTATACTTGTGCCATCATTGCATGTaGAATGGCACTTGGAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SQSSPKRGLLSVMKPVYLCHHCM*NGTWKV Trigger: CACTTTCCAAGTGCCATTTCACATGCAATGATGGCA...CAAGTATACTGGTTTCATAACAGATAGCAGTCCCCTCTTTGGACTTGACTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR-3UTR TCA 90 bp | AATATTGAAGGGGAACAAAGGGACTTCCACCCTGGCCTGCTCAAGCACCTTTTTTCCAGCATAAAGCAATaGGGTATCAATAACATATGG | + |
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Preference number: 2 (lower is better) Translates to: NIEGEQRDFHPGLLKHLFSSIKQ*GINNIW Trigger: CCATATGTTATTGATACCTCATTGCTTTATGCTGGA...AAAAAGGTGCTTGAGCAGGCCAGGGTGGAAGTCCCTTTGTTCCCCTTCAATATT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGAGGTTGGACTGCTCCAACAGGTGTTCTTTAAAGGTTTCACCAATTCCAGAGTTTTGTTGTCACTaGGTTAAGAATCTCCTTCGT | + |
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Preference number: 2 (lower is better) Translates to: GKRLDCSNRCSLKVSPIPEFCCH*VKNLLR Trigger: ACGAAGGAGATTCTTAACCCAGTGACAACAAAACTC...TGGAATTGGTGAAACCTTTAAAGAACACCTGTTGGAGCAGTCCAACCTCTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR-3UTR CCA 90 bp | AATATTGAAGGGGAACAAAGGGACTTCCACCCTGGCCTGCTCAAGCACCTTTTTAGCTCATTTATATCCTaGGTCAAGAAAAGGAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: NIEGEQRDFHPGLLKHLFSSFIS*VKKRSF Trigger: GAAACTCCTTTTCTTGACCCAGGATATAAATGAGCT...AAAAAGGTGCTTGAGCAGGCCAGGGTGGAAGTCCCTTTGTTCCCCTTCAATATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR CAA 90 bp | ACAGCATCAGGAGGAAGCAGTTCTCTTAACAGCTTCTGTACATCTTaGAGTTTTGTTGTCACTGGGTTAAGAATCTCCTTCGTGATTCCT | + |
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Preference number: 2 (lower is better) Translates to: TASGGSSSLNSFCTS*SFVVTGLRISFVIP Trigger: AGGAATCACGAAGGAGATTCTTAACCCAGTGACAACAAAACTCAAAGATGTACAGAAGCTGTTAAGAGAACTGCTTCCTCCTGATGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCATAGACAGTTGACATTTGTGTCCACTTGGTCTTCATACTGTTTTTCATCTAAGAAAAGGAGTTTCTaGCCCATTGACTCCAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: QHRQLTFVSTWSSYCFSSKKRSF*PIDSRH Trigger: ATGCCTGGAGTCAATGGGTCAGAAACTCCTTTTCTT...AGATGAAAAACAGTATGAAGACCAAGTGGACACAAATGTCAACTGTCTATGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR GCA 72 bp | CCCGTACTTAAGAAAATACTGAAGCAGCTCAAGAGCTaGTCTAGCATCTTCTATGCCATCCCGGCCAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: PVLKKILKQLKS*SSIFYAIPAKL Trigger: AAGCTTGGCCGGGATGGCATAGAAGATGCTAGAGCAGCTCTTGAGCTGCTTCAGTATTTTCTTAAGTACGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR-3UTR CAA 90 bp | TCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTCATGTGAAATGGCACTaGGAAAGTGCAGAGACTCAC | + |
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Preference number: 3 (lower is better) Translates to: SERGRGLPSLHVKWHLESHVKWH*ESAETH Trigger: GTGAGTCTCTGCACTTTCCAAGTGCCATTTCACATG...ACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000133758.9 ENSMUST00000208789.2 |
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| 3UTR-3UTR CAA 90 bp | TTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATAGAGGCTTGCCATCATaGCATGTGAAATGGCACTTG | + |
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Preference number: 3 (lower is better) Translates to: LEGIPKLSERGRGLPSLHRGLPS*HVKWHL Trigger: CAAGTGCCATTTCACATGCAATGATGGCAAGCCTCT...ATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000133758.9 ENSMUST00000207042.2 ENSMUST00000208789.2 |
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| 3UTR-3UTR CAA 90 bp | TTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGAAAGAGGGAGAGGCTaGCCATCATTGCATGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: LEGIPKLSERGRGLPSLHERGRG*PSLHVK Trigger: TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTC...ATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000133758.9 ENSMUST00000207042.2 ENSMUST00000208789.2 |
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| 3UTR TCA 72 bp | TATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTaGAATGGCACTTGGAAAGTGCAGAGACTCACACTC | + |
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Preference number: 3 (lower is better) Translates to: YLKEGEACHHCM*NGTWKVQRLTL Trigger: GAGTGTGAGTCTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000133758.9 ENSMUST00000208789.2 |
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| 3UTR GCA 72 bp | CCAGCCACATATATAGTACCTTGGTTCTCCGAATCTTaGTCTAGCTCTCTTACAAGGGTGTCACACTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: PATYIVPWFSES*SSSLTRVSHSR Trigger: CCTTGAGTGTGACACCCTTGTAAGAGAGCTAGAGCAAGATTCGGAGAACCAAGGTACTATATATGTGGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR-3UTR CAA 90 bp | TATACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCACATGTGAAATGGCACTaGGAAAGTGCAGAGACTCAC | + |
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Preference number: 3 (lower is better) Translates to: YTLEGIPKLSERGRGLPSHVKWH*ESAETH Trigger: GTGAGTCTCTGCACTTTCCAAGTGCCATTTCACATG...TGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000133758.9 ENSMUST00000208789.2 |
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| 3UTR TCA 72 bp | TCTTCTATGCCATCCCGGCCAAGCTTGTTAGGACACTaGATATCCTTCCCCAAAATAACTCTGGCTAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: SSMPSRPSLLGH*ISFPKITLAKN Trigger: ATTCTTAGCCAGAGTTATTTTGGGGAAGGATATTCAGTGTCCTAACAAGCTTGGCCGGGATGGCATAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR TCA 72 bp | TCTAATAGACTGCCATTCATGGTCTCTAGAGCCAGCTaGGCAGCTTCCAGGACTTCATATTGTATAGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: SNRLPFMVSRAS*AASRTSYCIEK Trigger: CTTCTCTATACAATATGAAGTCCTGGAAGCTGCTCAGCTGGCTCTAGAGACCATGAATGGCAGTCTATTAGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR-3UTR CAA 90 bp | TTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATCTTATAGCCATACTTTaGAATGATGGGGTCATTCTG | + |
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Preference number: 3 (lower is better) Translates to: LEGIPKLSERGRGLPSLHLIAIL*NDGVIL Trigger: CAGAATGACCCCATCATTCAAAAGTATGGCTATAAG...ATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR-3UTR CAA 90 bp | GCCCAAGCTACTAAACACCTTCTTCAGAGCCCCGACGTTACAATCTTTGCTAAAGACATTTGTGTCCACTaGGTCTTCATACTGTTTTTC | + |
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Preference number: 3 (lower is better) Translates to: AQATKHLLQSPDVTIFAKDICVH*VFILFF Trigger: GAAAAACAGTATGAAGACCAAGTGGACACAAATGTC...TTTAGCAAAGATTGTAACGTCGGGGCTCTGAAGAAGGTGTTTAGTAGCTTGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR TCA 72 bp | TCTGCAATCTTCTTTGGCCCGTACTTAAGAAAATACTaGAGCAGCTCAAGAGCTGCTCTAGCATCTTCTATG | + |
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Preference number: 3 (lower is better) Translates to: SAIFFGPYLRKY*SSSRAALASSM Trigger: CATAGAAGATGCTAGAGCAGCTCTTGAGCTGCTTCAGTATTTTCTTAAGTACGGGCCAAAGAAGATTGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR TCA 72 bp | GAAGTAAGGCCTGTAAGTTTCAAGAACAAGAGTGATTaGGTGTACTGGGCCCAAGCTACTAAACACCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: EVRPVSFKNKSD*VYWAQATKHLL Trigger: AAGAAGGTGTTTAGTAGCTTGGGCCCAGTACACTCAATCACTCTTGTTCTTGAAACTTACAGGCCTTACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR CCA 72 bp | AAGGTTTCACCAATTCCAGCCACATATATAGTACCTTaGTTCTCCGAATCTTGCTCTAGCTCTCTTACAAGG | + |
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Preference number: 3 (lower is better) Translates to: KVSPIPATYIVP*FSESCSSSLTR Trigger: CCTTGTAAGAGAGCTAGAGCAAGATTCGGAGAACCAAGGTACTATATATGTGGCTGGAATTGGTGAAACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR-3UTR CAA 90 bp | CAGCATAGACAGTTGACATTTGTGTCCACTTGGTCTTCATACTGTTTTTCATCTGAAAGAGGGAGAGGCTaGCCATCATTGCATGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: QHRQLTFVSTWSSYCFSSERGRG*PSLHVK Trigger: TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTC...AGATGAAAAACAGTATGAAGACCAAGTGGACACAAATGTCAACTGTCTATGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR TCA 72 bp | ATGACAATATACTTTAGAGGGTATCCCAAAGCTATCTaGAAGAGGGAGAGGCTTGCCATCATTGCATGTGAA | + |
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Preference number: 3 (lower is better) Translates to: MTIYFRGYPKAI*KRERLAIIACE Trigger: TTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGTATATTGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000133758.9 ENSMUST00000207042.2 ENSMUST00000208789.2 |
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| 3UTR GCA 72 bp | ATATTGAAGGGGAACAAAGGGACTTCCACCCTGGCCTaGTCAAGCACCTTTTTATTTGAAGAGCATTTAATA | + |
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Preference number: 3 (lower is better) Translates to: ILKGNKGTSTLA*SSTFLFEEHLI Trigger: TATTAAATGCTCTTCAAATAAAAAGGTGCTTGAGCAGGCCAGGGTGGAAGTCCCTTTGTTCCCCTTCAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| 3UTR TCA 72 bp | GTTACAATCTTTGCTAAATGGCCCAGCATAGACAGTTaGCATTTGTGTCCACTTGGTCTTCATACTGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: VTIFAKWPSIDS*HLCPLGLHTVF Trigger: AAAAACAGTATGAAGACCAAGTGGACACAAATGTCAACTGTCTATGCTGGGCCATTTAGCAAAGATTGTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
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| CDS-3UTR TCA 90 bp | AGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAGACTTGTCTCCTTGCTCCTaGTTGGCTGCTAGTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RERLAIIACEMALGKCRDLSPCS*LAASAS Trigger: GGAGGCACTAGCAGCCAATCAGGAGCAAGGAGACAA...GTCTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000207042.2 |
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| CDS-3UTR TCA 90 bp | AGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAGACGTCTCTAGAGCCAGCTaGGCAGCTTCCAGGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: RERLAIIACEMALGKCRDVSRAS*AASRTS Trigger: TGAAGTCCTGGAAGCTGCTCAGCTGGCTCTAGAGAC...GTCTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 |
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| CDS-3UTR CCA 90 bp | TTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGAGGCAGAAGGTGCCTaGGCTCAGGCTGTGGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: LEGIPKLSERGRGLPSLHEAEGA*AQAVVE Trigger: CTCTACCACAGCCTGAGCCCAGGCACCTTCTGCCTC...ATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
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| CDS-3UTR TCA 90 bp | AAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGATTGTCTCCTTGCTCCTaGTTGGCTGCTAGTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: KRERLAIIACEMALGKCRLSPCS*LAASAS Trigger: GGAGGCACTAGCAGCCAATCAGGAGCAAGGAGACAA...TCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000207042.2 |
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| CDS-3UTR TCA 90 bp | ATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGTTGTCTCCTTGCTCCTaGTTGGCTGCTAGTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPKLSERGRGLPSLHVKWLSPCS*LAASAS Trigger: GGAGGCACTAGCAGCCAATCAGGAGCAAGGAGACAA...CCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000207042.2 |
||
| CDS-3UTR TCA 90 bp | AAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGTCTCTAGAGCCAGCTaGGCAGCTTCCAGGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KLSERGRGLPSLHVKWHLVSRAS*AASRTS Trigger: TGAAGTCCTGGAAGCTGCTCAGCTGGCTCTAGAGAC...CAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAAAGGGACTTCCACCCTaGCCTGCTCAAGCACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRERLAIIACEMALGKCRKGLPP*PAQAPF Trigger: AAAAGGTGCTTGAGCAGGCCAGGGTGGAAGTCCCTT...TCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAGACCTCAGCGAAGAGGGGTaGAAAGGGCTGAAAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RERLAIIACEMALGKCRDLSEEG*KGLKRE Trigger: TTCTCTTTTCAGCCCTTTCCACCCCTCTTCGCTGAG...GTCTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAGGTCAGGGAAGAGGTTaGACTGCTCCAACAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRERLAIIACEMALGKCRGQGRG*TAPTGV Trigger: AACACCTGTTGGAGCAGTCCAACCTCTTCCCTGACC...TCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000208789.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCGAGTCCTGAAGATGTaGCTCTCCATGAGAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IPKLSERGRGLPSLHVKWRVLKM*LSMRGG Trigger: ACCTCCTCTCATGGAGAGGCACATCTTCAGGACTCG...CCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGATAAGCGAGCTTTCTTaGCTTGTGGCTCGCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLEGIPKLSERGRGLPSLISELS*LVARGP Trigger: AGGACCGCGAGCCACAAGCCAAGAAAGCTCGCTTAT...CAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | ATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGATAAGCGAGCTTTCTTaGCTTGTGGCTCGCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IPKLSERGRGLPSLHVKWISELS*LVARGP Trigger: AGGACCGCGAGCCACAAGCCAAGAAAGCTCGCTTAT...CCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGAAAGTGCAGAGACTCACACTCTCACGCCTGGGGTATCACTTTCTTCTTCTCCAAGTCTAGGCAATaGCCCACTAACACAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LGKCRDSHSHAWGITFFFSKSRQ*PTNTAS Trigger: TGATGCTGTGTTAGTGGGCCATTGCCTAGACTTGGA...GAAGAAGAAAGTGATACCCCAGGCGTGAGAGTGTGAGTCTCTGCACTTTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084644.3 |
||
| CDS-3UTR CCA 90 bp | GGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAAAAGGGACTTCCACCCTaGCCTGCTCAAGCACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GIPKLSERGRGLPSLHVKKGLPP*PAQAPF Trigger: AAAAGGTGCTTGAGCAGGCCAGGGTGGAAGTCCCTT...TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGAAGGGACTTCCACCCTaGCCTGCTCAAGCACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLSERGRGLPSLHVKWHLKGLPP*PAQAPF Trigger: AAAAGGTGCTTGAGCAGGCCAGGGTGGAAGTCCCTT...CAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | GGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAAGGTCAGGGAAGAGGTTaGACTGCTCCAACAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GIPKLSERGRGLPSLHVKGQGRG*TAPTGV Trigger: AACACCTGTTGGAGCAGTCCAACCTCTTCCCTGACC...TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000208789.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAGACAGCATTCTTGGTTCCTaGCATCAGGATGAGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RERLAIIACEMALGKCRDSILGS*HQDEAE Trigger: TTCTGCCTCATCCTGATGCCAGGAACCAAGAATGCT...GTCTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGAAAGTGCAGAGACTCACACTCTCACGCCTGGGGTATCACTTTCTTCTTCGCTACTATCTTTGGGTaGTTCACCTTCCGAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGKCRDSHSHAWGITFFFATIFG*FTFRVQ Trigger: CTGAACTCGGAAGGTGAACCACCCAAAGATAGTAGC...GAAGAAGAAAGTGATACCCCAGGCGTGAGAGTGTGAGTCTCTGCACTTTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208789.2 |
||
| 3UTR CAA 72 bp | TTAGGCAGGATCACAGCTTCCAGGTCAGGGAAGAGGTaGGACTGCTCCAACAGGTGTTCTTTAAAGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGRITASRSGKR*DCSNRCSLKVS Trigger: TGAAACCTTTAAAGAACACCTGTTGGAGCAGTCCAACCTCTTCCCTGACCTGGAAGCTGTGATCCTGCCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133758.9 |
||
| CDS-3UTR TCA 90 bp | GAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAGAAAAGGAGTTTCTaGCCCATTGACTCCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGIPKLSERGRGLPSLHVKKRSF*PIDSRH Trigger: ATGCCTGGAGTCAATGGGTCAGAAACTCCTTTTCTT...CACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR TCA 90 bp | GAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAAGGGGTGGAAAGGGCTaGAAAGAGAACTCCACAATA | + |
|
Preference number: 4 (lower is better) Translates to: ERGRGLPSLHVKWHLESARGGKG*KENSTI Trigger: TATTGTGGAGTTCTCTTTTCAGCCCTTTCCACCCCT...TGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAGCATTCTGTAGGTCGATaGTGGATCTTAAAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGRGLPSLHVKWHLESAEHSVGR*WILKWQ Trigger: CTGCCACTTTAAGATCCAGCATCGACCTACAGAATG...CTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGACTTCCACCCTGGCCTaGTCAAGCACCTTTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: EGIPKLSERGRGLPSLHVTSTLA*SSTFLF Trigger: AAATAAAAAGGTGCTTGAGCAGGCCAGGGTGGAAGT...CACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAGACTTCCACCCTGGCCTaGTCAAGCACCTTTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: RGRGLPSLHVKWHLESAETSTLA*SSTFLF Trigger: AAATAAAAAGGTGCTTGAGCAGGCCAGGGTGGAAGT...CTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGTGGTTCTCCGAATCTTaGTCTAGCTCTCTTACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGIPKLSERGRGLPSLHVWFSES*SSSLTR Trigger: CCTTGTAAGAGAGCTAGAGCAAGATTCGGAGAACCA...CACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000208789.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGCTCAGCGAAGAGGGGTaGAAAGGGCTGAAAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLSERGRGLPSLHVKWHLLSEEG*KGLKRE Trigger: TTCTCTTTTCAGCCCTTTCCACCCCTCTTCGCTGAG...CAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCTCAGCGAAGAGGGGTaGAAAGGGCTGAAAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLEGIPKLSERGRGLPSLLSEEG*KGLKRE Trigger: TTCTCTTTTCAGCCCTTTCCACCCCTCTTCGCTGAG...CAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | CCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACCCCCATAGGCATTGCTaGTTCAGGATGTATGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PKLSERGRGLPSLHVKWHPHRHC*FRMYVL Trigger: AAGGACATACATCCTGAACCAGCAATGCCTATGGGG...GTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
||
| CDS-3UTR TCA 90 bp | GGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAAAGGGGTGGAAAGGGCTaGAAAGAGAACTCCACAATA | + |
|
Preference number: 4 (lower is better) Translates to: GIPKLSERGRGLPSLHVKRGGKG*KENSTI Trigger: TATTGTGGAGTTCTCTTTTCAGCCCTTTCCACCCCT...TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGAAGCCCCATAGGCATTaGTGGTTCAGGATGTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLSERGRGLPSLHVKWHLKPHRH*WFRMYV Trigger: GACATACATCCTGAACCAGCAATGCCTATGGGGCTT...CAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGTCCAAGTCTAGGCAATaGCCCACTAACACAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TLEGIPKLSERGRGLPSLSKSRQ*PTNTAS Trigger: TGATGCTGTGTTAGTGGGCCATTGCCTAGACTTGGA...CAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | CTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAATCCAAGTCTAGGCAATaGCCCACTAACACAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSERGRGLPSLHVKWHLESKSRQ*PTNTAS Trigger: TGATGCTGTGTTAGTGGGCCATTGCCTAGACTTGGA...TTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| 3UTR CAA 72 bp | CCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATaGCATGTGAAATGGCACTTGGAAAGTGCAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: PKLSERGRGLPS*HVKWHLESAET Trigger: AGTCTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000133758.9 ENSMUST00000208789.2 |
||
| 3UTR CAA 72 bp | GAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTaGCCATCATTGCATGTGAAATGGCACTTGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EGIPKLSERGRG*PSLHVKWHLES Trigger: ACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000133758.9 ENSMUST00000207042.2 ENSMUST00000208789.2 |
||
| CDS-3UTR TCA 90 bp | CCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACAGCCATACTTTTGAATaGTGGGGTCATTCTGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKLSERGRGLPSLHVKWHSHTFE*WGHSVG Trigger: ACCTACAGAATGACCCCATCATTCAAAAGTATGGCT...GTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
||
| CDS-3UTR TCA 90 bp | CAATATACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCAAGGGGTGGAAAGGGCTaGAAAGAGAACTCCACAATA | + |
|
Preference number: 4 (lower is better) Translates to: QYTLEGIPKLSERGRGLPRGGKG*KENSTI Trigger: TATTGTGGAGTTCTCTTTTCAGCCCTTTCCACCCCT...TGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGTATATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR TCA 90 bp | ACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGTTTCAAGAACAAGAGTaGTTGAGTGTACTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLEGIPKLSERGRGLPSLFQEQE*LSVLGP Trigger: TGGGCCCAGTACACTCAATCACTCTTGTTCTTGAAA...CAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR TCA 90 bp | GGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATTTCAAGAACAAGAGTaGTTGAGTGTACTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GIPKLSERGRGLPSLHVKFQEQE*LSVLGP Trigger: TGGGCCCAGTACACTCAATCACTCTTGTTCTTGAAA...TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR TCA 90 bp | TTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATTTTCAAGAACAAGAGTaGTTGAGTGTACTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEGIPKLSERGRGLPSLHFQEQE*LSVLGP Trigger: TGGGCCCAGTACACTCAATCACTCTTGTTCTTGAAA...ATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR TCA 90 bp | GGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATCCAGTCTTTGCCTTTaGGAATTTCAAGGGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: GIPKLSERGRGLPSLHVKSSLCL*EFQGLP Trigger: AGGTAGCCCTTGAAATTCTCAAAGGCAAAGACTGGA...TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAGATTTACCCAGAACTaGATACTTCAGCAACTCACA | + |
|
Preference number: 4 (lower is better) Translates to: EGIPKLSERGRGLPSLHVRFTQN*ILQQLT Trigger: TGTGAGTTGCTGAAGTATGCAGTTCTGGGTAAATCT...CACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAGACAACCTTCTAATAGACTaGCATTCATGGTCTCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RERLAIIACEMALGKCRDNLLID*HSWSLE Trigger: CTCTAGAGACCATGAATGGCAGTCTATTAGAAGGTT...GTCTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR GCA 90 bp | GGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGTTCTCCGAATCTTaGTCTAGCTCTCTTACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GIPKLSERGRGLPSLHVKWFSES*SSSLTR Trigger: CCTTGTAAGAGAGCTAGAGCAAGATTCGGAGAACCA...TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000208789.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAAAAAGCACTCATATGTaGAGCTTCTTCCTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERGRGLPSLHVKWHLESAKSTHM*SFFLVS Trigger: GGAGACAAGGAAGAAGCTGCACATATGAGTGCTTTT...TGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207042.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGTGCTGGATCTTAAAGTaGCAGAAATTAGAGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGIPKLSERGRGLPSLHVCWILK*QKLEVL Trigger: AAGGACCTCTAATTTCTGCCACTTTAAGATCCAGCA...CACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
||
| CDS-3UTR TCA 90 bp | GGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAAAGCCATACTTTTGAATaGTGGGGTCATTCTGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GIPKLSERGRGLPSLHVKSHTFE*WGHSVG Trigger: ACCTACAGAATGACCCCATCATTCAAAAGTATGGCT...TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
||
| CDS-3UTR TCA 90 bp | TTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGCTTCTGTACATCTTTaGGTTTTGTTGTCACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEGIPKLSERGRGLPSLHASVHL*VLLSLG Trigger: ACCCAGTGACAACAAAACTCAAAGATGTACAGAAGC...ATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR TCA 90 bp | TATACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCAAAGAAAAGGAGTTTCTaGCCCATTGACTCCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YTLEGIPKLSERGRGLPSKKRSF*PIDSRH Trigger: ATGCCTGGAGTCAATGGGTCAGAAACTCCTTTTCTT...TGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR GCA 90 bp | TATACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATGGTTCTCCGAATCTTaGTCTAGCTCTCTTACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTLEGIPKLSERGRGLPSWFSES*SSSLTR Trigger: CCTTGTAAGAGAGCTAGAGCAAGATTCGGAGAACCA...TGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000208789.2 |
||
| CDS-3UTR TCA 90 bp | GGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATACTTAAGAAAATACTaGAGCAGCTCAAGAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GIPKLSERGRGLPSLHVKYLRKY*SSSRAA Trigger: AGCAGCTCTTGAGCTGCTTCAGTATTTTCTTAAGTA...TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000207042.2 |
||
| CDS-3UTR TCA 90 bp | ATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGTACTTAAGAAAATACTaGAGCAGCTCAAGAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPKLSERGRGLPSLHVKWYLRKY*SSSRAA Trigger: AGCAGCTCTTGAGCTGCTTCAGTATTTTCTTAAGTA...CCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000207042.2 |
||
| CDS-3UTR GCA 90 bp | TCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTAGATTTACCCAGAACTaGATACTTCAGCAACTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SERGRGLPSLHVKWHLESRFTQN*ILQQLT Trigger: TGTGAGTTGCTGAAGTATGCAGTTCTGGGTAAATCT...ACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | GGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGCTGGATCTTAAAGTaGCAGAAATTAGAGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GIPKLSERGRGLPSLHVKCWILK*QKLEVL Trigger: AAGGACCTCTAATTTCTGCCACTTTAAGATCCAGCA...TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGGAGTTTTGTTGTCACTaGGTTAAGAATCTCCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TLEGIPKLSERGRGLPSLEFCCH*VKNLLR Trigger: ACGAAGGAGATTCTTAACCCAGTGACAACAAAACTC...CAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | CCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACAGCTCATTTATATCCTaGGTCAAGAAAAGGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKLSERGRGLPSLHVKWHSSFIS*VKKRSF Trigger: GAAACTCCTTTTCTTGACCCAGGATATAAATGAGCT...GTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAAGCTCATTTATATCCTaGGTCAAGAAAAGGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KRERLAIIACEMALGKCRSSFIS*VKKRSF Trigger: GAAACTCCTTTTCTTGACCCAGGATATAAATGAGCT...TCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR TCA 90 bp | ATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGTCTTTCGGAGAAATCTaGATTCCAAATAGAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IPKLSERGRGLPSLHVKWSFGEI*IPNRTC Trigger: ACAGGTTCTATTTGGAATTCAGATTTCTCCGAAAGA...CCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
||
| CDS-3UTR TCA 90 bp | AAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGTCTTTCGGAGAAATCTaGATTCCAAATAGAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLSERGRGLPSLHVKWHLSFGEI*IPNRTC Trigger: ACAGGTTCTATTTGGAATTCAGATTTCTCCGAAAGA...CAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
||
| CDS-3UTR TCA 90 bp | GGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATCCAGCATAAAGCAATaGGGTATCAATAACATATGG | + |
|
Preference number: 4 (lower is better) Translates to: GIPKLSERGRGLPSLHVKSSIKQ*GINNIW Trigger: CCATATGTTATTGATACCTCATTGCTTTATGCTGGA...TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000207042.2 |
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| CDS-3UTR TCA 90 bp | CAATATACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATACTTAAGAAAATACTaGAGCAGCTCAAGAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QYTLEGIPKLSERGRGLPYLRKY*SSSRAA Trigger: AGCAGCTCTTGAGCTGCTTCAGTATTTTCTTAAGTA...TGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGTATATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000207042.2 |
||
| CDS-3UTR GCA 90 bp | TATACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCAAACCTTCTAATAGACTaGCATTCATGGTCTCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YTLEGIPKLSERGRGLPSNLLID*HSWSLE Trigger: CTCTAGAGACCATGAATGGCAGTCTATTAGAAGGTT...TGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAACATTTGTGTCCACTTaGTCTTCATACTGTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KRERLAIIACEMALGKCRTFVST*SSYCFS Trigger: TGAAAAACAGTATGAAGACCAAGTGGACACAAATGT...TCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAACATTTGTGTCCACTTaGTCTTCATACTGTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERGRGLPSLHVKWHLESATFVST*SSYCFS Trigger: TGAAAAACAGTATGAAGACCAAGTGGACACAAATGT...TGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR TCA 90 bp | CAATATACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCCAGCATAAAGCAATaGGGTATCAATAACATATGG | + |
|
Preference number: 4 (lower is better) Translates to: QYTLEGIPKLSERGRGLPSSIKQ*GINNIW Trigger: CCATATGTTATTGATACCTCATTGCTTTATGCTGGA...TGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGTATATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000207042.2 |
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| CDS-3UTR TCA 90 bp | TATACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATCCAGCATAAAGCAATaGGGTATCAATAACATATGG | + |
|
Preference number: 4 (lower is better) Translates to: YTLEGIPKLSERGRGLPSSSIKQ*GINNIW Trigger: CCATATGTTATTGATACCTCATTGCTTTATGCTGGA...TGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000207042.2 |
||
| CDS-3UTR CCA 90 bp | TATACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCAAGCTCATTTATATCCTaGGTCAAGAAAAGGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YTLEGIPKLSERGRGLPSSSFIS*VKKRSF Trigger: GAAACTCCTTTTCTTGACCCAGGATATAAATGAGCT...TGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
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| CDS-3UTR CCA 90 bp | ACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGACATTTGTGTCCACTTaGTCTTCATACTGTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLEGIPKLSERGRGLPSLTFVST*SSYCFS Trigger: TGAAAAACAGTATGAAGACCAAGTGGACACAAATGT...CAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
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| CDS TCA 90 bp | CCCATAGGCATTGCTGGTTCAGGATGTATGTCCTTGAGCCATGCCTaGAGGTGCCTTGGGGTTAGGGCATTTCTGCCTTTCAACTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PIGIAGSGCMSLSHA*RCLGVRAFLPFNFQ Trigger: CTGGAAGTTGAAAGGCAGAAATGCCCTAACCCCAAGGCACCTTCAGGCATGGCTCAAGGACATACATCCTGAACCAGCAATGCCTATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
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| CDS CCA 90 bp | AGCTTTTCAATCTTCCGGCTCCAACGCCAAGCTACTATCTTTGGGTaGTTCACCTTCCGAGTCCTGAAGATGTGCCTCTCCATGAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SFSIFRLQRQATIFG*FTFRVLKMCLSMRG Trigger: TCCTCTCATGGAGAGGCACATCTTCAGGACTCGGAAGGTGAACCACCCAAAGATAGTAGCTTGGCGTTGGAGCCGGAAGATTGAAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
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| CDS CCA 90 bp | GTAGAGCTTTTCAATCTTCCGGCTCCAACGCCAAGCTACTATCTTTaGGTGGTTCACCTTCCGAGTCCTGAAGATGTGCCTCTCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VELFNLPAPTPSYYL*VVHLPSPEDVPLHE Trigger: CTCATGGAGAGGCACATCTTCAGGACTCGGAAGGTGAACCACCCAAAGATAGTAGCTTGGCGTTGGAGCCGGAAGATTGAAAAGCTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
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| CDS-3UTR CAA 90 bp | CCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACATGCCTGAAGGTGCCTaGGGGTTAGGGCATTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PKLSERGRGLPSLHVKWHMPEGA*GLGHFC Trigger: GCAGAAATGCCCTAACCCCAAGGCACCTTCAGGCAT...GTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
||
| CDS TCA 90 bp | GGGTGCGACCCAAAAGCACCTGTAAGTTTCAAGAACAAGAGTGATTaGGTGTACTGGGCCCAAGCTACTAAACACCTTCTTCAGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GCDPKAPVSFKNKSD*VYWAQATKHLLQSP Trigger: GGGGCTCTGAAGAAGGTGTTTAGTAGCTTGGGCCCAGTACACTCAATCACTCTTGTTCTTGAAACTTACAGGTGCTTTTGGGTCGCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033218.15 |
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| CDS-3UTR CAA 90 bp | AGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAGGCCCAGCATAGACAGTaGACATTTGTGTCCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RGRGLPSLHVKWHLESAEAQHRQ*TFVSTW Trigger: CCAAGTGGACACAAATGTCAACTGTCTATGCTGGGC...CTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGAGGTCAGGGAAGAGGTaGGACTGCTCCAACAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KLSERGRGLPSLHVKWHLRSGKR*DCSNRC Trigger: ACACCTGTTGGAGCAGTCCAACCTCTTCCCTGACCT...CAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000208789.2 |
||
| CDS-3UTR CAA 90 bp | GGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAAAGGTCAGGGAAGAGGTaGGACTGCTCCAACAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GIPKLSERGRGLPSLHVKRSGKR*DCSNRC Trigger: ACACCTGTTGGAGCAGTCCAACCTCTTCCCTGACCT...TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000208789.2 |
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| CDS-3UTR CAA 90 bp | ACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGAGGTCAGGGAAGAGGTaGGACTGCTCCAACAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TLEGIPKLSERGRGLPSLRSGKR*DCSNRC Trigger: ACACCTGTTGGAGCAGTCCAACCTCTTCCCTGACCT...CAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000208789.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAGGAGAACTCCACAATATaGAAGGGGAACAAAGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: RGRGLPSLHVKWHLESAEENSTI*KGNKGT Trigger: AGTCCCTTTGTTCCCCTTCAATATTGTGGAGTTCTC...CTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGGCCCAGCATAGACAGTaGACATTTGTGTCCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLEGIPKLSERGRGLPSLAQHRQ*TFVSTW Trigger: CCAAGTGGACACAAATGTCAACTGTCTATGCTGGGC...CAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CAA 90 bp | CTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAGCCCAGCATAGACAGTaGACATTTGTGTCCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSERGRGLPSLHVKWHLEAQHRQ*TFVSTW Trigger: CCAAGTGGACACAAATGTCAACTGTCTATGCTGGGC...TTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CAA 90 bp | AGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAGACTTCCAGTCTTTGCCTTaGAGAATTTCAAGGGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: RERLAIIACEMALGKCRDFQSLP*RISRAT Trigger: GGTAGCCCTTGAAATTCTCAAAGGCAAAGACTGGAA...GTCTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
||
| CDS-3UTR CAA 90 bp | GAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGGGAGTTTCTGACCCATaGACTCCAGGCATTTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: EGIPKLSERGRGLPSLHVGVSDP*TPGILK Trigger: TTTTAAAATGCCTGGAGTCAATGGGTCAGAAACTCC...CACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CAA 90 bp | AGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAGACGGAGTTTCTGACCCATaGACTCCAGGCATTTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RERLAIIACEMALGKCRDGVSDP*TPGILK Trigger: TTTTAAAATGCCTGGAGTCAATGGGTCAGAAACTCC...GTCTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CAA 90 bp | GGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAAGCTACCTGGGCACTGTaGACAGTTTTAAACTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GIPKLSERGRGLPSLHVKATWAL*TVLNFR Trigger: CCTGAAGTTTAAAACTGTCAACAGTGCCCAGGTAGC...TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAGCTTATAGCCATACTTTaGAATGATGGGGTCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGRGLPSLHVKWHLESAELIAIL*NDGVIL Trigger: CAGAATGACCCCATCATTCAAAAGTATGGCTATAAG...CTCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
||
| CDS-3UTR CAA 90 bp | GGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAAGAGAACTCCACAATATaGAAGGGGAACAAAGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GIPKLSERGRGLPSLHVKENSTI*KGNKGT Trigger: AGTCCCTTTGTTCCCCTTCAATATTGTGGAGTTCTC...TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CAA 90 bp | ATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGGAGAACTCCACAATATaGAAGGGGAACAAAGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: IPKLSERGRGLPSLHVKWENSTI*KGNKGT Trigger: AGTCCCTTTGTTCCCCTTCAATATTGTGGAGTTCTC...CCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGGCTAGTGCCTCCAGATaGAACTCTGCAATCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TLEGIPKLSERGRGLPSLASASR*NSAIFF Trigger: AAAGAAGATTGCAGAGTTCAATCTGGAGGCACTAGC...CAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000207042.2 |
||
| CDS-3UTR CAA 90 bp | TTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGCTAGTGCCTCCAGATaGAACTCTGCAATCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LEGIPKLSERGRGLPSLHASASR*NSAIFF Trigger: AAAGAAGATTGCAGAGTTCAATCTGGAGGCACTAGC...ATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000207042.2 |
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| CDS-3UTR CAA 90 bp | GAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGATCTTGAGATCAGGCTaGACAAGTTCATCTATAAGA | + |
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Preference number: 5 (lower is better) Translates to: EGIPKLSERGRGLPSLHVILRSG*TSSSIR Trigger: TCTTATAGATGAACTTGTCAAGCCTGATCTCAAGAT...CACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
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| CDS-3UTR CAA 90 bp | GGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAAGGAGTTTCTGACCCATaGACTCCAGGCATTTTAAAA | + |
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Preference number: 5 (lower is better) Translates to: GIPKLSERGRGLPSLHVKGVSDP*TPGILK Trigger: TTTTAAAATGCCTGGAGTCAATGGGTCAGAAACTCC...TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
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| CDS-3UTR CAA 90 bp | AAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAGACATTTGTGTCCACTaGGTCTTCATACTGTTTTTC | + |
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Preference number: 5 (lower is better) Translates to: KRERLAIIACEMALGKCRDICVH*VFILFF Trigger: GAAAAACAGTATGAAGACCAAGTGGACACAAATGTC...TCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
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| CDS-3UTR CAA 90 bp | CTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAACTTATAGCCATACTTTaGAATGATGGGGTCATTCTG | + |
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Preference number: 5 (lower is better) Translates to: LSERGRGLPSLHVKWHLELIAIL*NDGVIL Trigger: CAGAATGACCCCATCATTCAAAAGTATGGCTATAAG...TTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
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| CDS-3UTR CAA 90 bp | AAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGAATCTTGAGATCAGGCTaGACAAGTTCATCTATAAGA | + |
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Preference number: 5 (lower is better) Translates to: KRERLAIIACEMALGKCRILRSG*TSSSIR Trigger: TCTTATAGATGAACTTGTCAAGCCTGATCTCAAGAT...TCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
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| CDS-3UTR CAA 90 bp | GGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAAGCTAGTGCCTCCAGATaGAACTCTGCAATTTTTAAT | + |
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Preference number: 5 (lower is better) Translates to: GIPKLSERGRGLPSLHVKASASR*NSAIFN Trigger: ATTAAAAATTGCAGAGTTCAATCTGGAGGCACTAGC...TTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033218.15 |
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| CDS-3UTR CAA 90 bp | CTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAGACATTTGTGTCCACTaGGTCTTCATACTGTTTTTC | + |
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Preference number: 5 (lower is better) Translates to: LSERGRGLPSLHVKWHLEDICVH*VFILFF Trigger: GAAAAACAGTATGAAGACCAAGTGGACACAAATGTC...TTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
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| CDS-3UTR CAA 90 bp | TCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGACATTTGTGTCCACTaGGTCTTCATACTGTTTTTC | + |
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Preference number: 5 (lower is better) Translates to: SERGRGLPSLHVKWHLESDICVH*VFILFF Trigger: GAAAAACAGTATGAAGACCAAGTGGACACAAATGTC...ACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
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| CDS-3UTR CAA 90 bp | AAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGGAAAGTGCAGACTTAAATCTTCTGCCTaGTTTTCCAGCATAAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: KRERLAIIACEMALGKCRLKSSA*FSSIKQ Trigger: TTGCTTTATGCTGGAAAACAAGGCAGAAGATTTAAG...TCTGCACTTTCCAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000207042.2 |
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| CDS-3UTR CAA 90 bp | TTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATTTCAACTTCCAGTCTTaGCCTTTGAGAATTTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: LEGIPKLSERGRGLPSLHFNFQS*PLRISR Trigger: CCTTGAAATTCTCAAAGGCAAAGACTGGAAGTTGAA...ATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
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| CDS CCA 90 bp | CTCATTCCCTTCAGAATAAAAACCACCACGTTGTTTAGTTGTTTTTaGTGTGAAAGCTGGCACCAGCTGGGTTTAGGAACAGCAGATTTA | + |
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Preference number: 5 (lower is better) Translates to: LIPFRIKTTTLFSCF*CESWHQLGLGTADL Trigger: TAAATCTGCTGTTCCTAAACCCAGCTGGTGCCAGCTTTCACACCAAAAACAACTAAACAACGTGGTGGTTTTTATTCTGAAGGGAATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
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| CDS-3UTR CAA 90 bp | AAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCATGTGAAATGGCACTTGATCTTGAGATCAGGCTaGACAAGTTCATCTATAAGA | + |
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Preference number: 5 (lower is better) Translates to: KLSERGRGLPSLHVKWHLILRSG*TSSSIR Trigger: TCTTATAGATGAACTTGTCAAGCCTGATCTCAAGAT...CAAGTGCCATTTCACATGCAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033218.15 ENSMUST00000084644.3 ENSMUST00000106520.9 |
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| CDS-3UTR CAA 90 bp | ACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCATTGCTTAAATCTTCTGCCTaGTTTTCCAGCATAAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: TLEGIPKLSERGRGLPSLLKSSA*FSSIKQ Trigger: TTGCTTTATGCTGGAAAACAAGGCAGAAGATTTAAG...CAATGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000207042.2 |
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| CDS-3UTR CAA 90 bp | TATACTTTAGAGGGTATCCCAAAGCTATCTGAAAGAGGGAGAGGCTTGCCATCACTTAAATCTTCTGCCTaGTTTTCCAGCATAAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: YTLEGIPKLSERGRGLPSLKSSA*FSSIKQ Trigger: TTGCTTTATGCTGGAAAACAAGGCAGAAGATTTAAG...TGATGGCAAGCCTCTCCCTCTTTCAGATAGCTTTGGGATACCCTCTAAAGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084644.3 ENSMUST00000106520.9 ENSMUST00000207042.2 |
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| CDS CCA 90 bp | GATTTACCCAGAACTGCATACTTCAGCAACTCACACAGCTGTCTATaGGTTACTTCACAGTTGTCAGTAAATAAAATGGTAGATAAGCGA | + |
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Preference number: 5 (lower is better) Translates to: DLPRTAYFSNSHSCL*VTSQLSVNKMVDKR Trigger: TCGCTTATCTACCATTTTATTTACTGACAACTGTGAAGTAACCCATAGACAGCTGTGTGAGTTGCTGAAGTATGCAGTTCTGGGTAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
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| CDS CCA 72 bp | ATCTTCCGGCTCCAACGCCAAGCTACTATCTTTGGGTaGTTCACCTTCCGAGTCCTGAAGATGTGCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: IFRLQRQATIFG*FTFRVLKMCLS Trigger: GGAGAGGCACATCTTCAGGACTCGGAAGGTGAACCACCCAAAGATAGTAGCTTGGCGTTGGAGCCGGAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
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| CDS TCA 72 bp | ATTGCTGGTTCAGGATGTATGTCCTTGAGCCATGCCTaGAGGTGCCTTGGGGTTAGGGCATTTCTGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: IAGSGCMSLSHA*RCLGVRAFLPF Trigger: GAAAGGCAGAAATGCCCTAACCCCAAGGCACCTTCAGGCATGGCTCAAGGACATACATCCTGAACCAGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
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| CDS GCA 72 bp | CATGAGAGGAGGTACAATTCGAAGCCCCATAGGCATTaGTGGTTCAGGATGTATGTCCTTGAGCCATGCCTG | + |
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Preference number: 6 (lower is better) Translates to: HERRYNSKPHRH*WFRMYVLEPCL Trigger: CAGGCATGGCTCAAGGACATACATCCTGAACCAGCAATGCCTATGGGGCTTCGAATTGTACCTCCTCTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
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| CDS CCA 72 bp | TTCAATCTTCCGGCTCCAACGCCAAGCTACTATCTTTaGGTGGTTCACCTTCCGAGTCCTGAAGATGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: FNLPAPTPSYYL*VVHLPSPEDVP Trigger: AGGCACATCTTCAGGACTCGGAAGGTGAACCACCCAAAGATAGTAGCTTGGCGTTGGAGCCGGAAGATTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
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| CDS CAA 72 bp | GGGGTTAGGGCATTTCTGCCTTTCAACTTCCAGTCTTaGCCTTTGAGAATTTCAAGGGCTACCTGGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: GVRAFLPFNFQS*PLRISRATWAL Trigger: CAGTGCCCAGGTAGCCCTTGAAATTCTCAAAGGCAAAGACTGGAAGTTGAAAGGCAGAAATGCCCTAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
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| CDS CAA 90 bp | AGGTGCCTTGGGGTTAGGGCATTTCTGCCTTTCAACTTCCAGTCTTaGCCTTTGAGAATTTCAAGGGCTACCTGGGCACTGTTGACAGTT | + |
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Preference number: 6 (lower is better) Translates to: RCLGVRAFLPFNFQS*PLRISRATWALLTV Trigger: AACTGTCAACAGTGCCCAGGTAGCCCTTGAAATTCTCAAAGGCAAAGACTGGAAGTTGAAAGGCAGAAATGCCCTAACCCCAAGGCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
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| CDS GCA 72 bp | CCAGCTGGGTTTAGGAACAGCAGATTTACCCAGAACTaGATACTTCAGCAACTCACACAGCTGTCTATGGGT | + |
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Preference number: 6 (lower is better) Translates to: PAGFRNSRFTQN*ILQQLTQLSMG Trigger: ACCCATAGACAGCTGTGTGAGTTGCTGAAGTATGCAGTTCTGGGTAAATCTGCTGTTCCTAAACCCAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
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| CDS CCA 72 bp | ATCTTCCGGCTCCAACGCCAAGCTACTATCTTTGGGTaGTTCACCTTCCGAGTTCAGGAAACAGTAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: IFRLQRQATIFG*FTFRVQETVVF Trigger: AAAAACTACTGTTTCCTGAACTCGGAAGGTGAACCACCCAAAGATAGTAGCTTGGCGTTGGAGCCGGAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208789.2 |
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| CDS CAA 72 bp | AGGGCATTTCTGCCTTTCAACTTCCAGTCTTTGCCTTaGAGAATTTCAAGGGCTACCTGGGCACTGTTGACA | + |
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Preference number: 6 (lower is better) Translates to: RAFLPFNFQSLP*RISRATWALLT Trigger: TGTCAACAGTGCCCAGGTAGCCCTTGAAATTCTCAAAGGCAAAGACTGGAAGTTGAAAGGCAGAAATGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
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| CDS CAA 90 bp | CTTGGGGTTAGGGCATTTCTGCCTTTCAACTTCCAGTCTTTGCCTTaGAGAATTTCAAGGGCTACCTGGGCACTGTTGACAGTTTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: LGVRAFLPFNFQSLP*RISRATWALLTVLN Trigger: GTTTAAAACTGTCAACAGTGCCCAGGTAGCCCTTGAAATTCTCAAAGGCAAAGACTGGAAGTTGAAAGGCAGAAATGCCCTAACCCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106520.9 |
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| CDS TCA 72 bp | CCAAAAGCACCTGTAAGTTTCAAGAACAAGAGTGATTaGGTGTACTGGGCCCAAGCTACTAAACACCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PKAPVSFKNKSD*VYWAQATKHLL Trigger: AAGAAGGTGTTTAGTAGCTTGGGCCCAGTACACTCAATCACTCTTGTTCTTGAAACTTACAGGTGCTTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033218.15 |
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| CDS CAA 90 bp | GCATACTTCAGCAACTCACACAGCTGTCTATGGGTTACTTCACAGTaGTCAGTAAATAAAATGGTAGATAAGCGAGCTTTCTTGGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: AYFSNSHSCLWVTSQ*SVNKMVDKRAFLAC Trigger: ACAAGCCAAGAAAGCTCGCTTATCTACCATTTTATTTACTGACAACTGTGAAGTAACCCATAGACAGCTGTGTGAGTTGCTGAAGTATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
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| CDS CCA 72 bp | AGAACTGCATACTTCAGCAACTCACACAGCTGTCTATaGGTTACTTCACAGTTGTCAGTAAATAAAATGGTA | + |
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Preference number: 6 (lower is better) Translates to: RTAYFSNSHSCL*VTSQLSVNKMV Trigger: TACCATTTTATTTACTGACAACTGTGAAGTAACCCATAGACAGCTGTGTGAGTTGCTGAAGTATGCAGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033218.15 ENSMUST00000106520.9 |
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