Pregenerated sensors for REXO4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052406Ensembl transcript IDs: ENSMUST00000064244.11, ENSMUST00000114020.10, ENSMUST00000136710.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAGACCTGACAGGCCTCATAACCCCATCCCAACTGCCACTGGATTaGGAAGTCTCTGACGGACAGGGTGGTGGCGACAGCAGTAGGATG | + |
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Preference number: 1 (lower is better) Translates to: IDLTGLITPSQLPLD*EVSDGQGGGDSSRM Trigger: CATCCTACTGCTGTCGCCACCACCCTGTCCGTCAGAGACTTCTCAATCCAGTGGCAGTTGGGATGGGGTTATGAGGCCTGTCAGGTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR CCA 90 bp | TCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTaGGAAGATGGCCTTTCTGCTTACACTGTTCCACATGGTAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: SLCNCCYPEQLLAGQ*EDGLSAYTVPHGRL Trigger: GAGCCTACCATGTGGAACAGTGTAAGCAGAAAGGCCATCTTCCCACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR CCA 90 bp | GGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGGGAAGGGGCGGTTGCTGTGCTaGCCAGACTGGTTTGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GHSAIAATQNSCWQDSGKGRLLC*PDWFAA Trigger: TGCTGCAAACCAGTCTGGCCAGCACAGCAACCGCCC...CTTCCCACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGGTAGTTCAGGAGGAAGTTCCCGCAGCTCACATGCCTGCAGCCATGGCTCAACTGCCACTGGATTaGGAAGTCTCTGACGGACAG | + |
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Preference number: 2 (lower is better) Translates to: PWVVQEEVPAAHMPAAMAQLPLD*EVSDGQ Trigger: CTGTCCGTCAGAGACTTCTCAATCCAGTGGCAGTTG...AGCCATGGCTGCAGGCATGTGAGCTGCGGGAACTTCCTCCTGAACTACCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR GCA 90 bp | GGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGGGAAGCTGGCCAGACTGGTTTaGAGCAGACTGAACGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: GHSAIAATQNSCWQDSGKLARLV*SRLNAL Trigger: AAGGGCGTTCAGTCTGCTGCAAACCAGTCTGGCCAG...CTTCCCACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR TCA 90 bp | TCACTGGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGCTGCAGCCATGGCTCTaGGAAAGCTCACCAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: SLVTLQLLLPRTAAGRTVLQPWL*ESSPKT Trigger: TGTCTTTGGTGAGCTTTCTCAGAGCCATGGCTGCAG...CACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR GCA 90 bp | GGCCAAGCAAAGGACAAAGGAGTGGGAAAGGACCTCCAGCCCAGTAGCTTTAAGCGCAGCTCACATGCCTaGAGCCATGGCTCTGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: GQAKDKGVGKDLQPSSFKRSSHA*SHGSEK Trigger: TTTCTCAGAGCCATGGCTGCAGGCATGTGAGCTGCG...CTTAAAGCTACTGGGCTGGAGGTCCTTTCCCACTCCTTTGTCCTTTGCTTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR GCA 90 bp | GGCCAAGCAAAGGACAAAGGAGTGGGAAAGGACCTCCAGCCCAGTAGCTTTAAGAATGGGCGGTTGCTGTaGTGGCCAGACTGGTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: GQAKDKGVGKDLQPSSFKNGRLL*WPDWFA Trigger: TGCAAACCAGTCTGGCCAGCACAGCAACCGCCCATT...CTTAAAGCTACTGGGCTGGAGGTCCTTTCCCACTCCTTTGTCCTTTGCTTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR TCA 90 bp | GGCCAAGCAAAGGACAAAGGAGTGGGAAAGGACCTCCAGCCCAGTAGCTTTAAGCTGCAGCCATGGCTCTaGGAAAGCTCACCAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: GQAKDKGVGKDLQPSSFKLQPWL*ESSPKT Trigger: TGTCTTTGGTGAGCTTTCTCAGAGCCATGGCTGCAG...CTTAAAGCTACTGGGCTGGAGGTCCTTTCCCACTCCTTTGTCCTTTGCTTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR GCA 90 bp | GGCCAAGCAAAGGACAAAGGAGTGGGAAAGGACCTCCAGCCCAGTAGCTTTAAGACCTCAACACACAGGTaGTGGATGATTAGGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GQAKDKGVGKDLQPSSFKTSTHR*WMIRPW Trigger: CCAGGGCCTAATCATCCAGCACCTGTGTGTTGAGGT...CTTAAAGCTACTGGGCTGGAGGTCCTTTCCCACTCCTTTGTCCTTTGCTTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR GCA 90 bp | TCACTGGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGAGCAGACATAGACTCTaGAGCACTCTCCTCCATTCC | + |
|
Preference number: 2 (lower is better) Translates to: SLVTLQLLLPRTAAGRTVSRHRL*STLLHS Trigger: GGAATGGAGGAGAGTGCTGCAGAGTCTATGTCTGCT...CACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACCAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR CCA 90 bp | GTTCTCCTTCCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTTCAACACACAGGTGCTaGATGATTAGGCCCTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: VLLPRTYTPDFCPVSDQSSTHRC*MIRPWV Trigger: TACCCAGGGCCTAATCATCCAGCACCTGTGTGTTGA...AGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGGAAGGAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR GCA 90 bp | GACATAGACTCTGCAGCACTCTCCTCCATTCCAATGATGTTCTCCTTCCTCGAACGCAGCTCACATGCCTaGAGCCATGGCTCTGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: DIDSAALSSIPMMFSFLERSSHA*SHGSEK Trigger: TTTCTCAGAGCCATGGCTGCAGGCATGTGAGCTGCG...TTCGAGGAAGGAGAACATCATTGGAATGGAGGAGAGTGCTGCAGAGTCTATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR CCA 90 bp | GAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTACCTCAACACACACATCCCAACTGCCACTaGATTGAGAAGTCTCTGACG | + |
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Preference number: 2 (lower is better) Translates to: EPTPLTSALYLTSLPQHTHPNCH*IEKSLT Trigger: CGTCAGAGACTTCTCAATCCAGTGGCAGTTGGGATG...TGTGTGTTGAGGTAGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR TCA 90 bp | GACATAGACTCTGCAGCACTCTCCTCCATTCCAATGATGTTCTCCTTCCTCGAACAACTGCCACTGGATTaGGAAGTCTCTGACGGACAG | + |
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Preference number: 2 (lower is better) Translates to: DIDSAALSSIPMMFSFLEQLPLD*EVSDGQ Trigger: CTGTCCGTCAGAGACTTCTCAATCCAGTGGCAGTTG...TTCGAGGAAGGAGAACATCATTGGAATGGAGGAGAGTGCTGCAGAGTCTATGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR CCA 90 bp | GACATAGACTCTGCAGCACTCTCCTCCATTCCAATGATGTTCTCCTTCCTCGAACATCCCAACTGCCACTaGATTGAGAAGTCTCTGACG | + |
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Preference number: 2 (lower is better) Translates to: DIDSAALSSIPMMFSFLEHPNCH*IEKSLT Trigger: CGTCAGAGACTTCTCAATCCAGTGGCAGTTGGGATG...TTCGAGGAAGGAGAACATCATTGGAATGGAGGAGAGTGCTGCAGAGTCTATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR TCA 90 bp | ATCCATCCATTTATTTTTGACAGTTCTAGGAAAGGATACCAGGGTCTTACACTTCTTAAGGGAAGGTGCTaGGTGCCCTGGCTGAGACCA | + |
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Preference number: 2 (lower is better) Translates to: IHPFIFDSSRKGYQGLTLLKGRC*VPWLRP Trigger: TGGTCTCAGCCAGGGCACTCAGCACCTTCCCTTAAG...AAGTGTAAGACCCTGGTATCCTTTCCTAGAACTGTCAAAAATAAATGGATGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR GCA 90 bp | ATCCATCCATTTATTTTTGACAGTTCTAGGAAAGGATACCAGGGTCTTACACTTAATGGGCGGTTGCTGTaGTGGCCAGACTGGTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: IHPFIFDSSRKGYQGLTLNGRLL*WPDWFA Trigger: TGCAAACCAGTCTGGCCAGCACAGCAACCGCCCATT...AAGTGTAAGACCCTGGTATCCTTTCCTAGAACTGTCAAAAATAAATGGATGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR CCA 90 bp | ATCCATCCATTTATTTTTGACAGTTCTAGGAAAGGATACCAGGGTCTTACACTTACCCAGAACAGCTGCTaGCAGGACAGTGGGAAGATG | + |
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Preference number: 2 (lower is better) Translates to: IHPFIFDSSRKGYQGLTLTQNSC*QDSGKM Trigger: CATCTTCCCACTGTCCTGCCAGCAGCTGTTCTGGGT...AAGTGTAAGACCCTGGTATCCTTTCCTAGAACTGTCAAAAATAAATGGATGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR CCA 90 bp | ATCCATCCATTTATTTTTGACAGTTCTAGGAAAGGATACCAGGGTCTTACACTTCAAAGGACAAAGGAGTaGGAAAGGACCTCCAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: IHPFIFDSSRKGYQGLTLQRTKE*ERTSSP Trigger: TGGGCTGGAGGTCCTTTCCCACTCCTTTGTCCTTTG...AAGTGTAAGACCCTGGTATCCTTTCCTAGAACTGTCAAAAATAAATGGATGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR GCA 72 bp | CCTCAATGGGCGGTTGCTGTGCTGGCCAGACTGGTTTaGAGCAGACTGAACGCCCTTAGCCTGGATCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: PQWAVAVLARLV*SRLNALSLDPL Trigger: CAAGGGATCCAGGCTAAGGGCGTTCAGTCTGCTGCAAACCAGTCTGGCCAGCACAGCAACCGCCCATTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR GCA 72 bp | GGTAGTTCAGGAGGAAGTTCCCGCAGCTCACATGCCTaGAGCCATGGCTCTGAGAAAGCTCACCAAAGACAG | + |
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Preference number: 3 (lower is better) Translates to: GSSGGSSRSSHA*SHGSEKAHQRQ Trigger: CTGTCTTTGGTGAGCTTTCTCAGAGCCATGGCTGCAGGCATGTGAGCTGCGGGAACTTCCTCCTGAACTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR TCA 72 bp | CAGAGAAGGCGCTTCTTGCTCCTTAAGGGAAGGTGCTaGGTGCCCTGGCTGAGACCAGCTATGCTCATTGTT | + |
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Preference number: 3 (lower is better) Translates to: QRRRFLLLKGRC*VPWLRPAMLIV Trigger: AACAATGAGCATAGCTGGTCTCAGCCAGGGCACTCAGCACCTTCCCTTAAGGAGCAAGAAGCGCCTTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR CCA 72 bp | GGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTaGCAGGACAGTGGGAAGATGGCCTTTCTGCTTACA | + |
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Preference number: 3 (lower is better) Translates to: GHSAIAATQNSC*QDSGKMAFLLT Trigger: TGTAAGCAGAAAGGCCATCTTCCCACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR GCA 72 bp | AGCCCAGTAGCTTTAAGAAAGTCCTCAATGGGCGGTTaGTGTGCTGGCCAGACTGGTTTGCAGCAGACTGAA | + |
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Preference number: 3 (lower is better) Translates to: SPVALRKSSMGG*CAGQTGLQQTE Trigger: TTCAGTCTGCTGCAAACCAGTCTGGCCAGCACAGCAACCGCCCATTGAGGACTTTCTTAAAGCTACTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR TCA 72 bp | TCTTGCTCCTTAAGGGAAGGTGCTGAGTGCCCTGGCTaGGACCAGCTATGCTCATTGTTAAGTGGTAGCACA | + |
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Preference number: 3 (lower is better) Translates to: SCSLREGAECPG*DQLCSLLSGST Trigger: TGTGCTACCACTTAACAATGAGCATAGCTGGTCTCAGCCAGGGCACTCAGCACCTTCCCTTAAGGAGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR CCA 72 bp | CCTGTATCTGACCAGTCTACCTCAACACACAGGTGCTaGATGATTAGGCCCTGGGTAGTTCAGGAGGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: PVSDQSTSTHRC*MIRPWVVQEEV Trigger: AACTTCCTCCTGAACTACCCAGGGCCTAATCATCCAGCACCTGTGTGTTGAGGTAGACTGGTCAGATACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR CCA 72 bp | AATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTaGGAAGATGGCCTTTCTGCTTACACTGTTCCACAT | + |
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Preference number: 3 (lower is better) Translates to: NCCYPEQLLAGQ*EDGLSAYTVPH Trigger: ATGTGGAACAGTGTAAGCAGAAAGGCCATCTTCCCACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR CAA 90 bp | ATCCATCCATTTATTTTTGACAGTTCTAGGAAAGGATACCAGGGTCTTACACTTGTCCTCAATGGGCGGTaGCTGTGCTGGCCAGACTGG | + |
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Preference number: 3 (lower is better) Translates to: IHPFIFDSSRKGYQGLTLVLNGR*LCWPDW Trigger: CCAGTCTGGCCAGCACAGCAACCGCCCATTGAGGAC...AAGTGTAAGACCCTGGTATCCTTTCCTAGAACTGTCAAAAATAAATGGATGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| 3UTR-3UTR CAA 90 bp | ATCCATCCATTTATTTTTGACAGTTCTAGGAAAGGATACCAGGGTCTTACACTTGACCAGCTATGCTCATaGTTAAGTGGTAGCACAGGT | + |
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Preference number: 3 (lower is better) Translates to: IHPFIFDSSRKGYQGLTLDQLCS*LSGSTG Trigger: ACCTGTGCTACCACTTAACAATGAGCATAGCTGGTC...AAGTGTAAGACCCTGGTATCCTTTCCTAGAACTGTCAAAAATAAATGGATGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR CCA 90 bp | CCCTGGGTAGTTCAGGAGGAAGTTCCCGCAGCTCACATGCCTGCAGCCATGGCTGCTGCCTGGGCATCCTaGATTGAGCAGTGCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: PWVVQEEVPAAHMPAAMAAAWAS*IEQCSA Trigger: GGCCGAGCACTGCTCAATCCAGGATGCCCAGGCAGC...AGCCATGGCTGCAGGCATGTGAGCTGCGGGAACTTCCTCCTGAACTACCCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR CCA 90 bp | TCACTGGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGTGCGGTGCTGTGGAGTaGCAGCTGGGGCACGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: SLVTLQLLLPRTAAGRTVCGAVE*QLGHAG Trigger: ACCGGCGTGCCCCAGCTGCCACTCCACAGCACCGCA...CACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACCAGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR CCA 90 bp | CCCTGGGTAGTTCAGGAGGAAGTTCCCGCAGCTCACATGCCTGCAGCCATGGCTTCTTCCGTACCAGCATaGCTGCCTCTGGGCCTATGG | + |
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Preference number: 4 (lower is better) Translates to: PWVVQEEVPAAHMPAAMASSVPA*LPLGLW Trigger: CCATAGGCCCAGAGGCAGCCATGCTGGTACGGAAGA...AGCCATGGCTGCAGGCATGTGAGCTGCGGGAACTTCCTCCTGAACTACCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR CCA 90 bp | GTTCAGGAGGAAGTTCCCGCAGCTCACATGCCTGCAGCCATGGCTCTGAGAAAGCTTGATGCGGTGCTGTaGAGTGGCAGCTGGGGCACG | + |
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Preference number: 4 (lower is better) Translates to: VQEEVPAAHMPAAMALRKLDAVL*SGSWGT Trigger: CGTGCCCCAGCTGCCACTCCACAGCACCGCATCAAG...CTTTCTCAGAGCCATGGCTGCAGGCATGTGAGCTGCGGGAACTTCCTCCTGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR CCA 90 bp | GGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGGGAAGCTTGATGCGGTGCTGTaGAGTGGCAGCTGGGGCACG | + |
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Preference number: 4 (lower is better) Translates to: GHSAIAATQNSCWQDSGKLDAVL*SGSWGT Trigger: CGTGCCCCAGCTGCCACTCCACAGCACCGCATCAAG...CTTCCCACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR CCA 90 bp | ACCTCAACACACAGGTGCTGGATGATTAGGCCCTGGGTAGTTCAGGAGGAAGTTTGCGGTGCTGTGGAGTaGCAGCTGGGGCACGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: TSTHRCWMIRPWVVQEEVCGAVE*QLGHAG Trigger: ACCGGCGTGCCCCAGCTGCCACTCCACAGCACCGCA...AACTTCCTCCTGAACTACCCAGGGCCTAATCATCCAGCACCTGTGTGTTGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR GCA 90 bp | CCCTGGGTAGTTCAGGAGGAAGTTCCCGCAGCTCACATGCCTGCAGCCATGGCTGACGTAAAGCCTCATTaGTGCCTGGGCATCCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: PWVVQEEVPAAHMPAAMADVKPH*CLGILD Trigger: ATCCAGGATGCCCAGGCAGCAATGAGGCTTTACGTC...AGCCATGGCTGCAGGCATGTGAGCTGCGGGAACTTCCTCCTGAACTACCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR GCA 90 bp | CCCTGGGTAGTTCAGGAGGAAGTTCCCGCAGCTCACATGCCTGCAGCCATGGCTGCCGGTTTGCAGTACTaGTCTCCCATTCCCGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: PWVVQEEVPAAHMPAAMAAGLQY*SPIPVS Trigger: TGAAACGGGAATGGGAGAGCAGTACTGCAAACCGGC...AGCCATGGCTGCAGGCATGTGAGCTGCGGGAACTTCCTCCTGAACTACCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR CCA 90 bp | CCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTACCTCAACAGCTGCCTGGGCATCCTaGATTGAGCAGTGCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: PRTYTPDFCPVSDQSTSTAAWAS*IEQCSA Trigger: GGCCGAGCACTGCTCAATCCAGGATGCCCAGGCAGC...TGTTGAGGTAGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR CCA 90 bp | GGCCAAGCAAAGGACAAAGGAGTGGGAAAGGACCTCCAGCCCAGTAGCTTTAAGCTGTGGAGTGGCAGCTaGGGCACGCCGGTTTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GQAKDKGVGKDLQPSSFKLWSGS*GTPVCS Trigger: ACTGCAAACCGGCGTGCCCCAGCTGCCACTCCACAG...CTTAAAGCTACTGGGCTGGAGGTCCTTTCCCACTCCTTTGTCCTTTGCTTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR TCA 90 bp | GGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGGGAAGTCAGTGGGCGTGGGCTaGTTCAAGATAACAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GHSAIAATQNSCWQDSGKSVGVG*FKITAA Trigger: GGCAGCTGTTATCTTGAATCAGCCCACGCCCACTGA...CTTCCCACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR TCA 90 bp | CCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTACCTCAACACTGGGCATCCTGGATTaGGCAGTGCTCGGCCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: PRTYTPDFCPVSDQSTSTLGILD*AVLGLL Trigger: CAACAGGCCGAGCACTGCTCAATCCAGGATGCCCAG...TGTTGAGGTAGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR GCA 90 bp | GTTCTCCTTCCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTCCGTACCAGCATGGCTaGCTCTGGGCCTATGGCATC | + |
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Preference number: 4 (lower is better) Translates to: VLLPRTYTPDFCPVSDQSPYQHG*LWAYGI Trigger: GATGCCATAGGCCCAGAGGCAGCCATGCTGGTACGG...AGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGGAAGGAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR CCA 90 bp | CCCTGGGTAGTTCAGGAGGAAGTTCCCGCAGCTCACATGCCTGCAGCCATGGCTAGATGTCTTCCTCAGTaGGCGTGGGCTGATTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: PWVVQEEVPAAHMPAAMARCLPQ*AWADSR Trigger: TCTTGAATCAGCCCACGCCCACTGAGGAAGACATCT...AGCCATGGCTGCAGGCATGTGAGCTGCGGGAACTTCCTCCTGAACTACCCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR CCA 90 bp | GGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGGGAAGCAGCATGGCTGCCTCTaGGCCTATGGCATCCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GHSAIAATQNSCWQDSGKQHGCL*AYGILN Trigger: ATTGAGGATGCCATAGGCCCAGAGGCAGCCATGCTG...CTTCCCACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CCA 90 bp | GGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGGGAAGCCTTCTCCAGGGAGATaGTCCTCTTCTTCTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GHSAIAATQNSCWQDSGKPSPGR*SSSSAP Trigger: TGGGGCAGAAGAAGAGGACCATCTCCCTGGAGAAGG...CTTCCCACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR TCA 90 bp | CCCTGGGTAGTTCAGGAGGAAGTTCCCGCAGCTCACATGCCTGCAGCCATGGCTCTGGCTCAGTTGGCTTaGCGTACTTGTCATAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: PWVVQEEVPAAHMPAAMALAQLA*RTCHKH Trigger: GTGTTTATGACAAGTACGTCAAGCCAACTGAGCCAG...AGCCATGGCTGCAGGCATGTGAGCTGCGGGAACTTCCTCCTGAACTACCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR TCA 90 bp | GAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTACCTCAACACACACTGGGCATCCTGGATTaGGCAGTGCTCGGCCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EPTPLTSALYLTSLPQHTLGILD*AVLGLL Trigger: CAACAGGCCGAGCACTGCTCAATCCAGGATGCCCAG...TGTGTGTTGAGGTAGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR GCA 90 bp | GTTCAGGAGGAAGTTCCCGCAGCTCACATGCCTGCAGCCATGGCTCTGAGAAAGGACGTAAAGCCTCATTaGTGCCTGGGCATCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VQEEVPAAHMPAAMALRKDVKPH*CLGILD Trigger: ATCCAGGATGCCCAGGCAGCAATGAGGCTTTACGTC...CTTTCTCAGAGCCATGGCTGCAGGCATGTGAGCTGCGGGAACTTCCTCCTGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR GCA 90 bp | GTTCTCCTTCCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTTGGGGCACGCCGGTTTaGAGTACTGCTCTCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VLLPRTYTPDFCPVSDQSWGTPV*STALPF Trigger: GAATGGGAGAGCAGTACTGCAAACCGGCGTGCCCCA...AGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGGAAGGAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CCA 90 bp | TCACTGGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGTGCTCTCTTCCCCTTTaGGACCCACGCCTACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SLVTLQLLLPRTAAGRTVCSLPL*DPRLPS Trigger: AGATGGTAGGCGTGGGTCCCAAAGGGGAAGAGAGCA...CACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR GCA 90 bp | GAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTACCTCAACACACATGGGGCACGCCGGTTTaGAGTACTGCTCTCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: EPTPLTSALYLTSLPQHTWGTPV*STALPF Trigger: GAATGGGAGAGCAGTACTGCAAACCGGCGTGCCCCA...TGTGTGTTGAGGTAGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CCA 90 bp | GTTCTCCTTCCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTCAGCATGGCTGCCTCTaGGCCTATGGCATCCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLLPRTYTPDFCPVSDQSQHGCL*AYGILN Trigger: ATTGAGGATGCCATAGGCCCAGAGGCAGCCATGCTG...AGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGGAAGGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CCA 90 bp | GGCCAAGCAAAGGACAAAGGAGTGGGAAAGGACCTCCAGCCCAGTAGCTTTAAGCCTTCTCCAGGGAGATaGTCCTCTTCTTCTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQAKDKGVGKDLQPSSFKPSPGR*SSSSAP Trigger: TGGGGCAGAAGAAGAGGACCATCTCCCTGGAGAAGG...CTTAAAGCTACTGGGCTGGAGGTCCTTTCCCACTCCTTTGTCCTTTGCTTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CCA 90 bp | GTTCTCCTTCCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTTGCTCTCTTCCCCTTTaGGACCCACGCCTACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VLLPRTYTPDFCPVSDQSCSLPL*DPRLPS Trigger: AGATGGTAGGCGTGGGTCCCAAAGGGGAAGAGAGCA...AGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGGAAGGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CCA 90 bp | GGCCAAGCAAAGGACAAAGGAGTGGGAAAGGACCTCCAGCCCAGTAGCTTTAAGAGCCTCATTGCTGCCTaGGCATCCTGGATTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQAKDKGVGKDLQPSSFKSLIAA*ASWIEQ Trigger: CTGCTCAATCCAGGATGCCCAGGCAGCAATGAGGCT...CTTAAAGCTACTGGGCTGGAGGTCCTTTCCCACTCCTTTGTCCTTTGCTTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| 3UTR CAA 72 bp | GTTTGCAGCAGACTGAACGCCCTTAGCCTGGATCCCTaGGATCCAGCAGAGCTTATCCCCTTACCTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VCSRLNALSLDP*DPAELIPLPDR Trigger: TCTGTCAGGTAAGGGGATAAGCTCTGCTGGATCCAAGGGATCCAGGCTAAGGGCGTTCAGTCTGCTGCAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR GCA 90 bp | GTTCTCCTTCCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTGCCGGTTTGCAGTACTaGTCTCCCATTCCCGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLLPRTYTPDFCPVSDQSAGLQY*SPIPVS Trigger: TGAAACGGGAATGGGAGAGCAGTACTGCAAACCGGC...AGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGGAAGGAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CCA 90 bp | CCCTGGGTAGTTCAGGAGGAAGTTCCCGCAGCTCACATGCCTGCAGCCATGGCTTTCTGCTGGATTATTTaGGGGTGCATTTTGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PWVVQEEVPAAHMPAAMAFCWII*GCILSS Trigger: GGATGACAAAATGCACCCCCAAATAATCCAGCAGAA...AGCCATGGCTGCAGGCATGTGAGCTGCGGGAACTTCCTCCTGAACTACCCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CCA 90 bp | TCACTGGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGACACACTTCCCATACTaGTTCACGATCGACACACGG | + |
|
Preference number: 4 (lower is better) Translates to: SLVTLQLLLPRTAAGRTVTHFPY*FTIDTR Trigger: CCGTGTGTCGATCGTGAACCAGTATGGGAAGTGTGT...CACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACCAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CCA 90 bp | GTTCTCCTTCCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTACACACTTCCCATACTaGTTCACGATCGACACACGG | + |
|
Preference number: 4 (lower is better) Translates to: VLLPRTYTPDFCPVSDQSTHFPY*FTIDTR Trigger: CCGTGTGTCGATCGTGAACCAGTATGGGAAGTGTGT...AGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGGAAGGAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR TCA 90 bp | GTTCTCCTTCCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTATTCCCGTTTCACCATaGCGTAAAGCCTCATTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLLPRTYTPDFCPVSDQSIPVSP*RKASLL Trigger: CAGCAATGAGGCTTTACGTCATGGTGAAACGGGAAT...AGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGGAAGGAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CCA 90 bp | ACCTCAACACACAGGTGCTGGATGATTAGGCCCTGGGTAGTTCAGGAGGAAGTTAGATGTCTTCCTCAGTaGGCGTGGGCTGATTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSTHRCWMIRPWVVQEEVRCLPQ*AWADSR Trigger: TCTTGAATCAGCCCACGCCCACTGAGGAAGACATCT...AACTTCCTCCTGAACTACCCAGGGCCTAATCATCCAGCACCTGTGTGTTGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CCA 90 bp | GACATAGACTCTGCAGCACTCTCCTCCATTCCAATGATGTTCTCCTTCCTCGAAAGCCTCATTGCTGCCTaGGCATCCTGGATTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DIDSAALSSIPMMFSFLESLIAA*ASWIEQ Trigger: CTGCTCAATCCAGGATGCCCAGGCAGCAATGAGGCT...TTCGAGGAAGGAGAACATCATTGGAATGGAGGAGAGTGCTGCAGAGTCTATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR TCA 90 bp | GTTCTCCTTCCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTGAGCTTTGCTCTTCCTaGACTTCTTCTTGGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLLPRTYTPDFCPVSDQSELCSS*TSSWLS Trigger: AGAAAGCCAAGAAGAAGTTCAGGAAGAGCAAAGCTC...AGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGGAAGGAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR TCA 90 bp | GAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTACCTCAACACACAATTCCCGTTTCACCATaGCGTAAAGCCTCATTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPTPLTSALYLTSLPQHTIPVSP*RKASLL Trigger: CAGCAATGAGGCTTTACGTCATGGTGAAACGGGAAT...TGTGTGTTGAGGTAGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR GCA 90 bp | TCACTGGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGGCCTTTTCTGTCCTCTaGTTGTCTCCCTTTGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLVTLQLLLPRTAAGRTVAFSVL*LSPFDL Trigger: TAAATCAAAGGGAGACAAGCAGAGGACAGAAAAGGC...CACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACCAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR GCA 90 bp | GGCCAAGCAAAGGACAAAGGAGTGGGAAAGGACCTCCAGCCCAGTAGCTTTAAGTTGGCTCCTTTCTTCTaGTCTGTTCCAGAGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: GQAKDKGVGKDLQPSSFKLAPFF*SVPEVS Trigger: AGATACCTCTGGAACAGAGCAGAAGAAAGGAGCCAA...CTTAAAGCTACTGGGCTGGAGGTCCTTTCCCACTCCTTTGTCCTTTGCTTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR CCA 90 bp | CCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTACCTCAACATTCTGCTGGATTATTTaGGGGTGCATTTTGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PRTYTPDFCPVSDQSTSTFCWII*GCILSS Trigger: GGATGACAAAATGCACCCCCAAATAATCCAGCAGAA...TGTTGAGGTAGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
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| CDS-3UTR CCA 90 bp | GGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGGGAAGATCCTCAATATCATCTaGATCCACATCATCAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: GHSAIAATQNSCWQDSGKILNII*IHIIKP Trigger: TGGTTTGATGATGTGGATCCAGATGATATTGAGGAT...CTTCCCACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CCA 90 bp | GAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTACCTCAACACACAAGTCACTGGCTCAGTTaGCTTGACGTACTTGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: EPTPLTSALYLTSLPQHTSHWLS*LDVLVI Trigger: TATGACAAGTACGTCAAGCCAACTGAGCCAGTGACT...TGTGTGTTGAGGTAGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CCA 90 bp | CCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTACCTCAACATACTCGACTCCTGAATaGTTTGAATTTCTGAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRTYTPDFCPVSDQSTSTYSTPE*FEFLSV Trigger: GACACTCAGAAATTCAAACCATTCAGGAGTCGAGTA...TGTTGAGGTAGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR GCA 90 bp | ATCCATCCATTTATTTTTGACAGTTCTAGGAAAGGATACCAGGGTCTTACACTTCCGTACCAGCATGGCTaGCTCTGGGCCTATGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: IHPFIFDSSRKGYQGLTLPYQHG*LWAYGI Trigger: GATGCCATAGGCCCAGAGGCAGCCATGCTGGTACGG...AAGTGTAAGACCCTGGTATCCTTTCCTAGAACTGTCAAAAATAAATGGATGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CCA 90 bp | GACATAGACTCTGCAGCACTCTCCTCCATTCCAATGATGTTCTCCTTCCTCGAAAGTCACTGGCTCAGTTaGCTTGACGTACTTGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: DIDSAALSSIPMMFSFLESHWLS*LDVLVI Trigger: TATGACAAGTACGTCAAGCCAACTGAGCCAGTGACT...TTCGAGGAAGGAGAACATCATTGGAATGGAGGAGAGTGCTGCAGAGTCTATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CCA 90 bp | ATCCATCCATTTATTTTTGACAGTTCTAGGAAAGGATACCAGGGTCTTACACTTTCTTCCGTACCAGCATaGCTGCCTCTGGGCCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: IHPFIFDSSRKGYQGLTLSSVPA*LPLGLW Trigger: CCATAGGCCCAGAGGCAGCCATGCTGGTACGGAAGA...AAGTGTAAGACCCTGGTATCCTTTCCTAGAACTGTCAAAAATAAATGGATGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR TCA 90 bp | ATCCATCCATTTATTTTTGACAGTTCTAGGAAAGGATACCAGGGTCTTACACTTCTGGCTCAGTTGGCTTaGCGTACTTGTCATAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: IHPFIFDSSRKGYQGLTLLAQLA*RTCHKH Trigger: GTGTTTATGACAAGTACGTCAAGCCAACTGAGCCAG...AAGTGTAAGACCCTGGTATCCTTTCCTAGAACTGTCAAAAATAAATGGATGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR TCA 90 bp | ATCCATCCATTTATTTTTGACAGTTCTAGGAAAGGATACCAGGGTCTTACACTTGAGCTTTGCTCTTCCTaGACTTCTTCTTGGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IHPFIFDSSRKGYQGLTLELCSS*TSSWLS Trigger: AGAAAGCCAAGAAGAAGTTCAGGAAGAGCAAAGCTC...AAGTGTAAGACCCTGGTATCCTTTCCTAGAACTGTCAAAAATAAATGGATGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR GCA 90 bp | ATCCATCCATTTATTTTTGACAGTTCTAGGAAAGGATACCAGGGTCTTACACTTGCCTTTTCTGTCCTCTaGTTGTCTCCCTTTGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: IHPFIFDSSRKGYQGLTLAFSVL*LSPFDL Trigger: TAAATCAAAGGGAGACAAGCAGAGGACAGAAAAGGC...AAGTGTAAGACCCTGGTATCCTTTCCTAGAACTGTCAAAAATAAATGGATGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | GGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGGGAAGCCTGATAGGCCCAGGTaGGGGCACCGGCGCGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GHSAIAATQNSCWQDSGKPDRPR*GHRRGG Trigger: GCCACCGCGCCGGTGCCCCAACCTGGGCCTATCAGG...CTTCCCACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | GTTCTCCTTCCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTCCTGATAGGCCCAGGTaGGGGCACCGGCGCGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLPRTYTPDFCPVSDQSPDRPR*GHRRGG Trigger: GCCACCGCGCCGGTGCCCCAACCTGGGCCTATCAGG...AGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGGAAGGAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS GCA 90 bp | TCGGCCTGCCACAGCCGCCGGGTGGCTTCCCGGAACCCCACTTCCTaGCAGAGCTTTGCTCTTCCTGAACTTCTTCTTGGCTTTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SACHSRRVASRNPTS*QSFALPELLLGFLP Trigger: AGGAAGAAAGCCAAGAAGAAGTTCAGGAAGAGCAAAGCTCTGGCAGGAAGTGGGGTTCCGGGAAGCCACCCGGCGGCTGTGGCAGGCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS GCA 90 bp | CCGCCAAAGGCTTGTTCCTTCTCCAGGGAGATGGTCCTCTTCTTCTaGCCCAGCCTCTTCCGTACCAGCATGGCTGCCTCTGGGCCTATG | + |
|
Preference number: 5 (lower is better) Translates to: PPKACSFSREMVLFF*PSLFRTSMAASGPM Trigger: CATAGGCCCAGAGGCAGCCATGCTGGTACGGAAGAGGCTGGGGCAGAAGAAGAGGACCATCTCCCTGGAGAAGGAACAAGCCTTTGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS-3UTR CAA 90 bp | CCCTGGGTAGTTCAGGAGGAAGTTCCCGCAGCTCACATGCCTGCAGCCATGGCTGAACCCCTAGTGCTCTaGGCCTTTTCTGTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PWVVQEEVPAAHMPAAMAEPLVL*AFSVLC Trigger: GCAGAGGACAGAAAAGGCCAAGAGCACTAGGGGTTC...AGCCATGGCTGCAGGCATGTGAGCTGCGGGAACTTCCTCCTGAACTACCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS GCA 90 bp | GTTCTTGATGCGGTGCTGTGGAGTGGCAGCTGGGGCACGCCGGTTTaGAGTACTGCTCTCCCATTCCCGTTTCACCATGACGTAAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VLDAVLWSGSWGTPV*STALPFPFHHDVKP Trigger: AGGCTTTACGTCATGGTGAAACGGGAATGGGAGAGCAGTACTGCAAACCGGCGTGCCCCAGCTGCCACTCCACAGCACCGCATCAAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS TCA 90 bp | GGGCACGCCGGTTTGCAGTACTGCTCTCCCATTCCCGTTTCACCATaGCGTAAAGCCTCATTGCTGCCTGGGCATCCTGGATTGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GHAGLQYCSPIPVSP*RKASLLPGHPGLSS Trigger: ACTGCTCAATCCAGGATGCCCAGGCAGCAATGAGGCTTTACGTCATGGTGAAACGGGAATGGGAGAGCAGTACTGCAAACCGGCGTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS CCA 90 bp | GGGAGATGGTCCTCTTCTTCTGCCCCAGCCTCTTCCGTACCAGCATaGCTGCCTCTGGGCCTATGGCATCCTCAATATCATCTGGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRWSSSSAPASSVPA*LPLGLWHPQYHLDP Trigger: TGGATCCAGATGATATTGAGGATGCCATAGGCCCAGAGGCAGCCATGCTGGTACGGAAGAGGCTGGGGCAGAAGAAGAGGACCATCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS CCA 90 bp | AGGCTTTTGTCAAGCCGCCAAAGGCTTGTTCCTTCTCCAGGGAGATaGTCCTCTTCTTCTGCCCCAGCCTCTTCCGTACCAGCATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLLSSRQRLVPSPGR*SSSSAPASSVPAWL Trigger: CAGCCATGCTGGTACGGAAGAGGCTGGGGCAGAAGAAGAGGACCATCTCCCTGGAGAAGGAACAAGCCTTTGGCGGCTTGACAAAAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS-3UTR CAA 90 bp | GGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGGGAAGCAAGCCGCCAAAGGCTaGTTCCTTCTCCAGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GHSAIAATQNSCWQDSGKQAAKG*FLLQGD Trigger: ATCTCCCTGGAGAAGGAACAAGCCTTTGGCGGCTTG...CTTCCCACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS GCA 90 bp | GATGGTCCTCTTCTTCTGCCCCAGCCTCTTCCGTACCAGCATGGCTaGCTCTGGGCCTATGGCATCCTCAATATCATCTGGATCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: DGPLLLPQPLPYQHG*LWAYGILNIIWIHI Trigger: GATGTGGATCCAGATGATATTGAGGATGCCATAGGCCCAGAGGCAGCCATGCTGGTACGGAAGAGGCTGGGGCAGAAGAAGAGGACCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTCCTTCCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTATGCTCTCTTCCCCTTaGGGACCCACGCCTACCATC | + |
|
Preference number: 5 (lower is better) Translates to: VLLPRTYTPDFCPVSDQSMLSSP*GPTPTI Trigger: GATGGTAGGCGTGGGTCCCAAAGGGGAAGAGAGCAT...AGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGGAAGGAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS CCA 90 bp | CTCATTGCTGCCTGGGCATCCTGGATTGAGCAGTGCTCGGCCTGTTaGACCCTGATCCCCAGAATTTTCTCAGAAAGCCGTTTCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LIAAWASWIEQCSAC*TLIPRIFSESRFRD Trigger: GTCTCTGAAACGGCTTTCTGAGAAAATTCTGGGGATCAGGGTCCAACAGGCCGAGCACTGCTCAATCCAGGATGCCCAGGCAGCAATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS-3UTR CAA 90 bp | CCCTGGGTAGTTCAGGAGGAAGTTCCCGCAGCTCACATGCCTGCAGCCATGGCTGTTCTGCTGGATTATTaGGGGGTGCATTTTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: PWVVQEEVPAAHMPAAMAVLLDY*GVHFVI Trigger: GATGACAAAATGCACCCCCAAATAATCCAGCAGAAC...AGCCATGGCTGCAGGCATGTGAGCTGCGGGAACTTCCTCCTGAACTACCCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | GTTCTCCTTCCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTGAACCCCTAGTGCTCTaGGCCTTTTCTGTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLPRTYTPDFCPVSDQSEPLVL*AFSVLC Trigger: GCAGAGGACAGAAAAGGCCAAGAGCACTAGGGGTTC...AGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGGAAGGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | CCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTACCTCAACACAAGCCGCCAAAGGCTaGTTCCTTCTCCAGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PRTYTPDFCPVSDQSTSTQAAKG*FLLQGD Trigger: ATCTCCCTGGAGAAGGAACAAGCCTTTGGCGGCTTG...TGTTGAGGTAGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | ACCTCAACACACAGGTGCTGGATGATTAGGCCCTGGGTAGTTCAGGAGGAAGTTATGCTCTCTTCCCCTTaGGGACCCACGCCTACCATC | + |
|
Preference number: 5 (lower is better) Translates to: TSTHRCWMIRPWVVQEEVMLSSP*GPTPTI Trigger: GATGGTAGGCGTGGGTCCCAAAGGGGAAGAGAGCAT...AACTTCCTCCTGAACTACCCAGGGCCTAATCATCCAGCACCTGTGTGTTGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS TCA 90 bp | TTTCACCATGACGTAAAGCCTCATTGCTGCCTGGGCATCCTGGATTaGGCAGTGCTCGGCCTGTTGGACCCTGATCCCCAGAATTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FHHDVKPHCCLGILD*AVLGLLDPDPQNFL Trigger: GAGAAAATTCTGGGGATCAGGGTCCAACAGGCCGAGCACTGCTCAATCCAGGATGCCCAGGCAGCAATGAGGCTTTACGTCATGGTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS CCA 90 bp | TCTGCCCCAGCCTCTTCCGTACCAGCATGGCTGCCTCTGGGCCTATaGCATCCTCAATATCATCTGGATCCACATCATCAAACCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: SAPASSVPAWLPLGL*HPQYHLDPHHQTRC Trigger: ACATCTGGTTTGATGATGTGGATCCAGATGATATTGAGGATGCCATAGGCCCAGAGGCAGCCATGCTGGTACGGAAGAGGCTGGGGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS CCA 90 bp | CCTCTTCTTCTGCCCCAGCCTCTTCCGTACCAGCATGGCTGCCTCTaGGCCTATGGCATCCTCAATATCATCTGGATCCACATCATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PLLLPQPLPYQHGCL*AYGILNIIWIHIIK Trigger: TTTGATGATGTGGATCCAGATGATATTGAGGATGCCATAGGCCCAGAGGCAGCCATGCTGGTACGGAAGAGGCTGGGGCAGAAGAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS-3UTR CAA 90 bp | TCACTGGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGTTCCTGAACTTCTTCTaGGCTTTCTTCCTAGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLVTLQLLLPRTAAGRTVFLNFF*AFFLAS Trigger: GCTCGCTAGGAAGAAAGCCAAGAAGAAGTTCAGGAA...CACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACCAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | GTTCTCCTTCCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTCAACGCCTTCCAATTTaGAGAAAAGTTCTCGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLPRTYTPDFCPVSDQSQRLPI*RKVLGG Trigger: GCCCCCGAGAACTTTTCTCAAAATTGGAAGGCGTTG...AGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGGAAGGAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | GGCCAAGCAAAGGACAAAGGAGTGGGAAAGGACCTCCAGCCCAGTAGCTTTAAGTTCCTGAACTTCTTCTaGGCTTTCTTCCTAGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GQAKDKGVGKDLQPSSFKFLNFF*AFFLAS Trigger: GCTCGCTAGGAAGAAAGCCAAGAAGAAGTTCAGGAA...CTTAAAGCTACTGGGCTGGAGGTCCTTTCCCACTCCTTTGTCCTTTGCTTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | GAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTACCTCAACACACACTTCCTGCCAGAGCTTaGCTCTTCCTGAACTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EPTPLTSALYLTSLPQHTLPARA*LFLNFF Trigger: GAAGAAGTTCAGGAAGAGCAAAGCTCTGGCAGGAAG...TGTGTGTTGAGGTAGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | GAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTACCTCAACACACACAACGCCTTCCAATTTaGAGAAAAGTTCTCGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EPTPLTSALYLTSLPQHTQRLPI*RKVLGG Trigger: GCCCCCGAGAACTTTTCTCAAAATTGGAAGGCGTTG...TGTGTGTTGAGGTAGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | GGTCACTCTGCAATTGCTGCTACCCAGAACAGCTGCTGGCAGGACAGTGGGAAGTCTGCTTGTCTCCCTTaGATTTATCTGAGGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GHSAIAATQNSCWQDSGKSACLP*IYLRPF Trigger: AAAAGGCCTCAGATAAATCAAAGGGAGACAAGCAGA...CTTCCCACTGTCCTGCCAGCAGCTGTTCTGGGTAGCAGCAATTGCAGAGTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | ACCTCAACACACAGGTGCTGGATGATTAGGCCCTGGGTAGTTCAGGAGGAAGTTAGGCTTGAGAGCCCCTaGATGAGAAGAGATGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: TSTHRCWMIRPWVVQEEVRLESP*MRRDVT Trigger: AGTGACATCTCTTCTCATCAAGGGGCTCTCAAGCCT...AACTTCCTCCTGAACTACCCAGGGCCTAATCATCCAGCACCTGTGTGTTGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS GCA 90 bp | CGTTTCAGAGACGGTCGTCCACTCTTTAAATCATTGTGTAGCGCATaGCCCACCAGGATTCTGCCCTTCAACATTTCTGCCACTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RFRDGRPLFKSLCSA*PTRILPFNISATSF Trigger: GAAGGAAGTGGCAGAAATGTTGAAGGGCAGAATCCTGGTGGGGCATGCGCTACACAATGATTTAAAGAGTGGACGACCGTCTCTGAAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136710.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTCCTTCCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTGTTCTGCTGGATTATTaGGGGGTGCATTTTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: VLLPRTYTPDFCPVSDQSVLLDY*GVHFVI Trigger: GATGACAAAATGCACCCCCAAATAATCCAGCAGAAC...AGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGGAAGGAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | ACCTCAACACACAGGTGCTGGATGATTAGGCCCTGGGTAGTTCAGGAGGAAGTTCTATATGTCCTCTTCTaGGCTCCTTTCTTCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSTHRCWMIRPWVVQEEVLYVLF*APFFCS Trigger: AGAGCAGAAGAAAGGAGCCAAGAAGAGGACATATAG...AACTTCCTCCTGAACTACCCAGGGCCTAATCATCCAGCACCTGTGTGTTGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | CCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTACCTCAACATTTTCTGTCCTCTGCTaGTCTCCCTTTGATTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: PRTYTPDFCPVSDQSTSTFSVLC*SPFDLS Trigger: AGATAAATCAAAGGGAGACAAGCAGAGGACAGAAAA...TGTTGAGGTAGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | GTTCTCCTTCCTCGAACCTACACCCCTGACTTCTGCCCTGTATCTGACCAGTCTTTTTCTGTCCTCTGCTaGTCTCCCTTTGATTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: VLLPRTYTPDFCPVSDQSFSVLC*SPFDLS Trigger: AGATAAATCAAAGGGAGACAAGCAGAGGACAGAAAA...AGACTGGTCAGATACAGGGCAGAAGTCAGGGGTGTAGGTTCGAGGAAGGAGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS GCA 90 bp | TTTGGATGGTCAAGGAACAAAACCTTTAAATCATTGTGTAGCGCATaGCCCACCAGGATTCTGCCCTTCAACATTTCTGCCACTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FGWSRNKTFKSLCSA*PTRILPFNISATSF Trigger: GAAGGAAGTGGCAGAAATGTTGAAGGGCAGAATCCTGGTGGGGCATGCGCTACACAATGATTTAAAGGTTTTGTTCCTTGACCATCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | ATCCATCCATTTATTTTTGACAGTTCTAGGAAAGGATACCAGGGTCTTACACTTAGGCTTGAGAGCCCCTaGATGAGAAGAGATGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: IHPFIFDSSRKGYQGLTLRLESP*MRRDVT Trigger: AGTGACATCTCTTCTCATCAAGGGGCTCTCAAGCCT...AAGTGTAAGACCCTGGTATCCTTTCCTAGAACTGTCAAAAATAAATGGATGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS-3UTR CAA 90 bp | ATCCATCCATTTATTTTTGACAGTTCTAGGAAAGGATACCAGGGTCTTACACTTCTATATGTCCTCTTCTaGGCTCCTTTCTTCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IHPFIFDSSRKGYQGLTLLYVLF*APFFCS Trigger: AGAGCAGAAGAAAGGAGCCAAGAAGAGGACATATAG...AAGTGTAAGACCCTGGTATCCTTTCCTAGAACTGTCAAAAATAAATGGATGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS CCA 72 bp | GGGGCCTTCGGCGGTCGGCCTGCCACAGCCGCCGGGTaGCTTCCCGGAACCCCACTTCCTGCCAGAGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GAFGGRPATAAG*LPGTPLPARAL Trigger: CAAAGCTCTGGCAGGAAGTGGGGTTCCGGGAAGCCACCCGGCGGCTGTGGCAGGCCGACCGCCGAAGGCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS GCA 72 bp | GCGGTGCTGTGGAGTGGCAGCTGGGGCACGCCGGTTTaGAGTACTGCTCTCCCATTCCCGTTTCACCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: AVLWSGSWGTPV*STALPFPFHHD Trigger: GTCATGGTGAAACGGGAATGGGAGAGCAGTACTGCAAACCGGCGTGCCCCAGCTGCCACTCCACAGCACCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS TCA 72 bp | GACGTAAAGCCTCATTGCTGCCTGGGCATCCTGGATTaGGCAGTGCTCGGCCTGTTGGACCCTGATCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DVKPHCCLGILD*AVLGLLDPDPQ Trigger: CTGGGGATCAGGGTCCAACAGGCCGAGCACTGCTCAATCCAGGATGCCCAGGCAGCAATGAGGCTTTACGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS CAA 90 bp | ACAGCCGCCGGGTGGCTTCCCGGAACCCCACTTCCTGCCAGAGCTTaGCTCTTCCTGAACTTCTTCTTGGCTTTCTTCCTAGCGAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TAAGWLPGTPLPARA*LFLNFFLAFFLASF Trigger: GAAGCTCGCTAGGAAGAAAGCCAAGAAGAAGTTCAGGAAGAGCAAAGCTCTGGCAGGAAGTGGGGTTCCGGGAAGCCACCCGGCGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS GCA 72 bp | GCTTGTTCCTTCTCCAGGGAGATGGTCCTCTTCTTCTaGCCCAGCCTCTTCCGTACCAGCATGGCTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ACSFSREMVLFF*PSLFRTSMAAS Trigger: AGAGGCAGCCATGCTGGTACGGAAGAGGCTGGGGCAGAAGAAGAGGACCATCTCCCTGGAGAAGGAACAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS GCA 72 bp | TCCCATACTGGTTCACGATCGACACACGGGCTGCGATaGTCTCTTCCCCTTTGGGACCCACGCCTACCATCT | + |
|
Preference number: 6 (lower is better) Translates to: SHTGSRSTHGLR*SLPLWDPRLPS Trigger: AGATGGTAGGCGTGGGTCCCAAAGGGGAAGAGAGCATCGCAGCCCGTGTGTCGATCGTGAACCAGTATGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS CCA 72 bp | CTGCCCCAGCCTCTTCCGTACCAGCATGGCTGCCTCTaGGCCTATGGCATCCTCAATATCATCTGGATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LPQPLPYQHGCL*AYGILNIIWIH Trigger: GTGGATCCAGATGATATTGAGGATGCCATAGGCCCAGAGGCAGCCATGCTGGTACGGAAGAGGCTGGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS GCA 72 bp | CTTCTTCTGCCCCAGCCTCTTCCGTACCAGCATGGCTaGCTCTGGGCCTATGGCATCCTCAATATCATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLPQPLPYQHG*LWAYGILNIIW Trigger: CCAGATGATATTGAGGATGCCATAGGCCCAGAGGCAGCCATGCTGGTACGGAAGAGGCTGGGGCAGAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS CCA 72 bp | TCAAGCCGCCAAAGGCTTGTTCCTTCTCCAGGGAGATaGTCCTCTTCTTCTGCCCCAGCCTCTTCCGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: SSRQRLVPSPGR*SSSSAPASSVP Trigger: TGGTACGGAAGAGGCTGGGGCAGAAGAAGAGGACCATCTCCCTGGAGAAGGAACAAGCCTTTGGCGGCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS CCA 72 bp | TCCTCTTCTTCTGCCCCAGCCTCTTCCGTACCAGCATaGCTGCCTCTGGGCCTATGGCATCCTCAATATCAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSAPASSVPA*LPLGLWHPQYH Trigger: ATGATATTGAGGATGCCATAGGCCCAGAGGCAGCCATGCTGGTACGGAAGAGGCTGGGGCAGAAGAAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS TCA 72 bp | GGTTTGCAGTACTGCTCTCCCATTCCCGTTTCACCATaGCGTAAAGCCTCATTGCTGCCTGGGCATCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GLQYCSPIPVSP*RKASLLPGHPG Trigger: TCCAGGATGCCCAGGCAGCAATGAGGCTTTACGTCATGGTGAAACGGGAATGGGAGAGCAGTACTGCAAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 |
||
| CDS CAA 72 bp | GGGTGGCTTCCCGGAACCCCACTTCCTGCCAGAGCTTaGCTCTTCCTGAACTTCTTCTTGGCTTTCTTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: GWLPGTPLPARA*LFLNFFLAFFL Trigger: TAGGAAGAAAGCCAAGAAGAAGTTCAGGAAGAGCAAAGCTCTGGCAGGAAGTGGGGTTCCGGGAAGCCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS CAA 72 bp | ATCCAGGGCCAAGGCTTTTGTCAAGCCGCCAAAGGCTaGTTCCTTCTCCAGGGAGATGGTCCTCTTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: IQGQGFCQAAKG*FLLQGDGPLLL Trigger: CAGAAGAAGAGGACCATCTCCCTGGAGAAGGAACAAGCCTTTGGCGGCTTGACAAAAGCCTTGGCCCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS CAA 72 bp | AGCCGTTTCAGAGACGGTCGTCCACTCTTTAAATCATaGTGTAGCGCATGCCCCACCAGGATTCTGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRFRDGRPLFKS*CSACPTRILPF Trigger: GAAGGGCAGAATCCTGGTGGGGCATGCGCTACACAATGATTTAAAGAGTGGACGACCGTCTCTGAAACGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136710.2 |
||
| CDS TCA 72 bp | TCATCAAACCAGATGTCTTCCTCAGTGGGCGTGGGCTaGTTCAAGATAACAGCTGCCTCCGTAGCTTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSNQMSSSVGVG*FKITAASVAFH Trigger: GTGGAAAGCTACGGAGGCAGCTGTTATCTTGAATCAGCCCACGCCCACTGAGGAAGACATCTGGTTTGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064244.11 ENSMUST00000114020.10 ENSMUST00000136710.2 |
||
| CDS CAA 90 bp | TTCTCAGAAAGCCGTTTCAGAGACGGTCGTCCACTCTTTAAATCATaGTGTAGCGCATGCCCCACCAGGATTCTGCCCTTCAACATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FSESRFRDGRPLFKS*CSACPTRILPFNIS Trigger: AGAAATGTTGAAGGGCAGAATCCTGGTGGGGCATGCGCTACACAATGATTTAAAGAGTGGACGACCGTCTCTGAAACGGCTTTCTGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136710.2 |
||