Pregenerated sensors for REXO2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032026Ensembl transcript IDs: ENSMUST00000034524.5, ENSMUST00000213895.2, ENSMUST00000216470.2, ENSMUST00000217037.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACCGGCCTATGAGCAAGTGCAGATATGGACTGAGGGGGTGGGTGTaGCCTGAAGCTTACAAAGGAGCCGCTGTCAGAACAGAAACAGCA | + |
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Preference number: 1 (lower is better) Translates to: NRPMSKCRYGLRGWV*PEAYKGAAVRTETA Trigger: TGCTGTTTCTGTTCTGACAGCGGCTCCTTTGTAAGCTTCAGGCCACACCCACCCCCTCAGTCCATATCTGCACTTGCTCATAGGCCGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| 3UTR TCA 90 bp | GCCTATGAGCAAGTGCAGATATGGACTGAGGGGGTGGGTGTGGCCTaGAGCTTACAAAGGAGCCGCTGTCAGAACAGAAACAGCAGGTTA | + |
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Preference number: 1 (lower is better) Translates to: AYEQVQIWTEGVGVA*SLQRSRCQNRNSRL Trigger: TAACCTGCTGTTTCTGTTCTGACAGCGGCTCCTTTGTAAGCTTCAGGCCACACCCACCCCCTCAGTCCATATCTGCACTTGCTCATAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| 3UTR TCA 90 bp | AGCCGCTGTCAGAACAGAAACAGCAGGTTAGAAGAAACGGAAGAGTaGTGTCTGCTTGAGGAGTATGAAGATGCAAAGTTAACTGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: SRCQNRNSRLEETEE*CLLEEYEDAKLTGK Trigger: TTTTCCAGTTAACTTTGCATCTTCATACTCCTCAAGCAGACATCACTCTTCCGTTTCTTCTAACCTGCTGTTTCTGTTCTGACAGCGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| 3UTR CCA 72 bp | GTGTCGAGCGATCAGCAGGAGAGAGAGACGCTAACGTaGCTTCTGAGAGCCAGGCTCTGCGGCTTGAGAACC | + |
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Preference number: 3 (lower is better) Translates to: VSSDQQERETLT*LLRARLCGLRT Trigger: GGTTCTCAAGCCGCAGAGCCTGGCTCTCAGAAGCCACGTTAGCGTCTCTCTCTCCTGCTGATCGCTCGACAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| 3UTR CCA 72 bp | CGGCCTATGAGCAAGTGCAGATATGGACTGAGGGGGTaGGTGTGGCCTGAAGCTTACAAAGGAGCCGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: RPMSKCRYGLRG*VWPEAYKGAAV Trigger: GACAGCGGCTCCTTTGTAAGCTTCAGGCCACACCCACCCCCTCAGTCCATATCTGCACTTGCTCATAGGCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| 3UTR TCA 72 bp | CCGATATATAAAAGTGGACGAGCACTCCGAATCAGGTaGGTGGAAGGCAAGACCTCAGCTGGTCTCTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: PIYKSGRALRIR*VEGKTSAGLSG Trigger: CCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATTCGGAGTGCTCGTCCACTTTTATATATCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| 3UTR CCA 72 bp | ACTCCGAATCAGGTGAGTGGAAGGCAAGACCTCAGCTaGTCTCTCTGGGACTTCAGTTACTCGAACCACTAC | + |
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Preference number: 3 (lower is better) Translates to: TPNQVSGRQDLS*SLWDFSYSNHY Trigger: GTAGTGGTTCGAGTAACTGAAGTCCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATTCGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217037.2 |
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| 3UTR CCA 72 bp | TATATAAAAGTGGACGAGCACTCCGAATCAGGTGAGTaGAAGGCAAGACCTCAGCTGGTCTCTCTGGGACTT | + |
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Preference number: 3 (lower is better) Translates to: YIKVDEHSESGE*KARPQLVSLGL Trigger: AAGTCCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATTCGGAGTGCTCGTCCACTTTTATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217037.2 |
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| 3UTR TCA 72 bp | CAGAACAGAAACAGCAGGTTAGAAGAAACGGAAGAGTaGTGTCTGCTTGAGGAGTATGAAGATGCAAAGTTA | + |
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Preference number: 3 (lower is better) Translates to: QNRNSRLEETEE*CLLEEYEDAKL Trigger: TAACTTTGCATCTTCATACTCCTCAAGCAGACATCACTCTTCCGTTTCTTCTAACCTGCTGTTTCTGTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR CCA 90 bp | CGATCAGCAGGAGAGAGAGACGCTAACGTGGCTTCTGAGAGCCAGGCTCTGCGGCGCCCCGCAACAGCCTaGCGCCCAGGGATACGCCTA | + |
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Preference number: 4 (lower is better) Translates to: RSAGERDANVASESQALRRPATA*RPGIRL Trigger: TAGGCGTATCCCTGGGCGCCAGGCTGTTGCGGGGCG...CCGCAGAGCCTGGCTCTCAGAAGCCACGTTAGCGTCTCTCTCTCCTGCTGATCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR CCA 90 bp | GAGCACTCCGAATCAGGTGAGTGGAAGGCAAGACCTCAGCTGGTCTCTCTGGGACGCCCCGCAACAGCCTaGCGCCCAGGGATACGCCTA | + |
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Preference number: 4 (lower is better) Translates to: EHSESGEWKARPQLVSLGRPATA*RPGIRL Trigger: TAGGCGTATCCCTGGGCGCCAGGCTGTTGCGGGGCG...TCCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATTCGGAGTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS-3UTR GCA 90 bp | TGCAGATATGGACTGAGGGGGTGGGTGTGGCCTGAAGCTTACAAAGGAGCCGCTCCCTGCCGCCATGGCTaGGCTACCTTCGCTGACACC | + |
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Preference number: 4 (lower is better) Translates to: CRYGLRGWVWPEAYKGAAPCRHG*ATFADT Trigger: GGTGTCAGCGAAGGTAGCGCAGCCATGGCGGCAGGG...AGCGGCTCCTTTGTAAGCTTCAGGCCACACCCACCCCCTCAGTCCATATCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR GCA 90 bp | GAGCACTCCGAATCAGGTGAGTGGAAGGCAAGACCTCAGCTGGTCTCTCTGGGACCCTGCCGCCATGGCTaGGCTACCTTCGCTGACACC | + |
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Preference number: 4 (lower is better) Translates to: EHSESGEWKARPQLVSLGPCRHG*ATFADT Trigger: GGTGTCAGCGAAGGTAGCGCAGCCATGGCGGCAGGG...TCCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATTCGGAGTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS-3UTR GCA 90 bp | TGCAGATATGGACTGAGGGGGTGGGTGTGGCCTGAAGCTTACAAAGGAGCCGCTAGCCATGCTCTCCCCTaGCGCCATGGCTGCGCTACC | + |
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Preference number: 4 (lower is better) Translates to: CRYGLRGWVWPEAYKGAASHALP*RHGCAT Trigger: GGTAGCGCAGCCATGGCGGCAGGGGAGAGCATGGCT...AGCGGCTCCTTTGTAAGCTTCAGGCCACACCCACCCCCTCAGTCCATATCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR GCA 90 bp | AGCACTCCGAATCAGGTGAGTGGAAGGCAAGACCTCAGCTGGTCTCTCTGGGACAGCCATGCTCTCCCCTaGCGCCATGGCTGCGCTACC | + |
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Preference number: 4 (lower is better) Translates to: STPNQVSGRQDLSWSLWDSHALP*RHGCAT Trigger: GGTAGCGCAGCCATGGCGGCAGGGGAGAGCATGGCT...GTCCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATTCGGAGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS-3UTR TCA 90 bp | GAGCACTCCGAATCAGGTGAGTGGAAGGCAAGACCTCAGCTGGTCTCTCTGGGAACCCAGACCATTCGCTaGGCCATGCTCTCCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: EHSESGEWKARPQLVSLGTQTIR*AMLSPA Trigger: GGCAGGGGAGAGCATGGCTCAGCGAATGGTCTGGGT...TCCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATTCGGAGTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS-3UTR GCA 90 bp | AGCACTCCGAATCAGGTGAGTGGAAGGCAAGACCTCAGCTGGTCTCTCTGGGACCCATTCGCTGAGCCATaGTCTCCCCTGCCGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: STPNQVSGRQDLSWSLWDPFAEP*SPLPPW Trigger: CCATGGCGGCAGGGGAGAGCATGGCTCAGCGAATGG...GTCCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATTCGGAGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS-3UTR GCA 90 bp | GAGCACTCCGAATCAGGTGAGTGGAAGGCAAGACCTCAGCTGGTCTCTCTGGGACCATTCGCTGAGCCATaGTCTCCCCTGCCGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: EHSESGEWKARPQLVSLGPFAEP*SPLPPW Trigger: CCATGGCGGCAGGGGAGAGCATGGCTCAGCGAATGG...TCCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATTCGGAGTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS-3UTR TCA 90 bp | GATCAGCAGGAGAGAGAGACGCTAACGTGGCTTCTGAGAGCCAGGCTCTGCGGCCTCCTTGCACCAGTCTaGCATGCTGTCCAGCAACTC | + |
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Preference number: 4 (lower is better) Translates to: DQQERETLTWLLRARLCGLLAPV*HAVQQL Trigger: GAGTTGCTGGACAGCATGTCAGACTGGTGCAAGGAG...GCCGCAGAGCCTGGCTCTCAGAAGCCACGTTAGCGTCTCTCTCTCCTGCTGATC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR TCA 90 bp | GCAGGAGAGAGAGACGCTAACGTGGCTTCTGAGAGCCAGGCTCTGCGGCTTGAGTCATCCAGTGCCCTGTaGGAAGCAGCCTTCTTCGGT | + |
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Preference number: 4 (lower is better) Translates to: AGERDANVASESQALRLESSSAL*EAAFFG Trigger: ACCGAAGAAGGCTGCTTCTCACAGGGCACTGGATGA...CTCAAGCCGCAGAGCCTGGCTCTCAGAAGCCACGTTAGCGTCTCTCTCTCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR GCA 90 bp | GCAGGAGAGAGAGACGCTAACGTGGCTTCTGAGAGCCAGGCTCTGCGGCTTGAGAGCCCCGGAGGAGTCTaGTGTCGTACAAAGGACAGA | + |
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Preference number: 4 (lower is better) Translates to: AGERDANVASESQALRLESPGGV*CRTKDR Trigger: TCTGTCCTTTGTACGACAGCAGACTCCTCCGGGGCT...CTCAAGCCGCAGAGCCTGGCTCTCAGAAGCCACGTTAGCGTCTCTCTCTCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR CCA 90 bp | GAAGGCAAGACCTCAGCTGGTCTCTCTGGGACTTCAGTTACTCGAACCACTACTCGCCCCGCAACAGCCTaGCGCCCAGGGATACGCCTA | + |
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Preference number: 4 (lower is better) Translates to: EGKTSAGLSGTSVTRTTTRPATA*RPGIRL Trigger: TAGGCGTATCCCTGGGCGCCAGGCTGTTGCGGGGCG...AGTAGTGGTTCGAGTAACTGAAGTCCCAGAGAGACCAGCTGAGGTCTTGCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217037.2 |
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| CDS-3UTR GCA 90 bp | GATCAGCAGGAGAGAGAGACGCTAACGTGGCTTCTGAGAGCCAGGCTCTGCGGCTCCCGTGATGCTCCTTaGACCAGTCTGACATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: DQQERETLTWLLRARLCGSRDAP*TSLTCC Trigger: ACAGCATGTCAGACTGGTGCAAGGAGCATCACGGGA...GCCGCAGAGCCTGGCTCTCAGAAGCCACGTTAGCGTCTCTCTCTCCTGCTGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR TCA 90 bp | AATAAAAGGAACCGGCCTATGAGCAAGTGCAGATATGGACTGAGGGGGTGGGTGACCCAGACCATTCGCTaGGCCATGCTCTCCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: NKRNRPMSKCRYGLRGWVTQTIR*AMLSPA Trigger: GGCAGGGGAGAGCATGGCTCAGCGAATGGTCTGGGT...CACCCACCCCCTCAGTCCATATCTGCACTTGCTCATAGGCCGGTTCCTTTTATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR TCA 90 bp | GAGCACTCCGAATCAGGTGAGTGGAAGGCAAGACCTCAGCTGGTCTCTCTGGGACTCCTTGCACCAGTCTaGCATGCTGTCCAGCAACTC | + |
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Preference number: 4 (lower is better) Translates to: EHSESGEWKARPQLVSLGLLAPV*HAVQQL Trigger: GAGTTGCTGGACAGCATGTCAGACTGGTGCAAGGAG...TCCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATTCGGAGTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS-3UTR GCA 90 bp | AAGGCAAGACCTCAGCTGGTCTCTCTGGGACTTCAGTTACTCGAACCACTACTACCCTGCCGCCATGGCTaGGCTACCTTCGCTGACACC | + |
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Preference number: 4 (lower is better) Translates to: KARPQLVSLGLQLLEPLLPCRHG*ATFADT Trigger: GGTGTCAGCGAAGGTAGCGCAGCCATGGCGGCAGGG...TAGTAGTGGTTCGAGTAACTGAAGTCCCAGAGAGACCAGCTGAGGTCTTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217037.2 |
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| CDS-3UTR GCA 90 bp | AGCACTCCGAATCAGGTGAGTGGAAGGCAAGACCTCAGCTGGTCTCTCTGGGACTGCACCAGTCTGACATaGTGTCCAGCAACTCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: STPNQVSGRQDLSWSLWDCTSLT*CPATRP Trigger: CGGACGAGTTGCTGGACAGCATGTCAGACTGGTGCA...GTCCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATTCGGAGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS-3UTR TCA 90 bp | GGGGTGATGCTGAGTTCATGTGTGTTTCTCAGATCGAGTTCCAAGCCATTGCACACCCAGACCATTCGCTaGGCCATGCTCTCCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GVMLSSCVFLRSSSKPLHTQTIR*AMLSPA Trigger: GGCAGGGGAGAGCATGGCTCAGCGAATGGTCTGGGT...GTGCAATGGCTTGGAACTCGATCTGAGAAACACACATGAACTCAGCATCACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217037.2 |
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| CDS-3UTR GCA 90 bp | AGCACTCCGAATCAGGTGAGTGGAAGGCAAGACCTCAGCTGGTCTCTCTGGGACTCCCGTGATGCTCCTTaGACCAGTCTGACATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: STPNQVSGRQDLSWSLWDSRDAP*TSLTCC Trigger: ACAGCATGTCAGACTGGTGCAAGGAGCATCACGGGA...GTCCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATTCGGAGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS-3UTR GCA 90 bp | GATCAGCAGGAGAGAGAGACGCTAACGTGGCTTCTGAGAGCCAGGCTCTGCGGCAATTCATACTCTGCCTaGTGCAGTGTGACTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: DQQERETLTWLLRARLCGNSYSA*CSVTVL Trigger: GAGCACAGTCACACTGCAGCAGGCAGAGTATGAATT...GCCGCAGAGCCTGGCTCTCAGAAGCCACGTTAGCGTCTCTCTCTCCTGCTGATC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR GCA 90 bp | GGGTGTGGCCTGAAGCTTACAAAGGAGCCGCTGTCAGAACAGAAACAGCAGGTTTGCACCAGTCTGACATaGTGTCCAGCAACTCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: GCGLKLTKEPLSEQKQQVCTSLT*CPATRP Trigger: CGGACGAGTTGCTGGACAGCATGTCAGACTGGTGCA...AACCTGCTGTTTCTGTTCTGACAGCGGCTCCTTTGTAAGCTTCAGGCCACACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR TCA 90 bp | GAAGGCAAGACCTCAGCTGGTCTCTCTGGGACTTCAGTTACTCGAACCACTACTCTCCTTGCACCAGTCTaGCATGCTGTCCAGCAACTC | + |
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Preference number: 4 (lower is better) Translates to: EGKTSAGLSGTSVTRTTTLLAPV*HAVQQL Trigger: GAGTTGCTGGACAGCATGTCAGACTGGTGCAAGGAG...AGTAGTGGTTCGAGTAACTGAAGTCCCAGAGAGACCAGCTGAGGTCTTGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217037.2 |
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| CDS-3UTR GCA 90 bp | CTTACAAAGGAGCCGCTGTCAGAACAGAAACAGCAGGTTAGAAGAAACGGAAGACCATTCGCTGAGCCATaGTCTCCCCTGCCGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: LTKEPLSEQKQQVRRNGRPFAEP*SPLPPW Trigger: CCATGGCGGCAGGGGAGAGCATGGCTCAGCGAATGG...TCTTCCGTTTCTTCTAACCTGCTGTTTCTGTTCTGACAGCGGCTCCTTTGTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR GCA 90 bp | GAGCACTCCGAATCAGGTGAGTGGAAGGCAAGACCTCAGCTGGTCTCTCTGGGATGTGCTCTCCTTCACTaGCTTGGTAAGACCAGACTT | + |
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Preference number: 4 (lower is better) Translates to: EHSESGEWKARPQLVSLGCALLH*LGKTRL Trigger: AAGTCTGGTCTTACCAAGGCAGTGAAGGAGAGCACA...TCCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATTCGGAGTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217037.2 |
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| CDS-3UTR GCA 90 bp | CCTATGAGCAAGTGCAGATATGGACTGAGGGGGTGGGTGTGGCCTGAAGCTTACTGTGCTCTCCTTCACTaGCTTGGTAAGACCAGACTT | + |
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Preference number: 4 (lower is better) Translates to: PMSKCRYGLRGWVWPEAYCALLH*LGKTRL Trigger: AAGTCTGGTCTTACCAAGGCAGTGAAGGAGAGCACA...GTAAGCTTCAGGCCACACCCACCCCCTCAGTCCATATCTGCACTTGCTCATAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR GCA 90 bp | AAAAGGAACCGGCCTATGAGCAAGTGCAGATATGGACTGAGGGGGTGGGTGTGGACTAATGTCATCCAGTaGCCTGTGAGAAGCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KRNRPMSKCRYGLRGWVWTNVIQ*PVRSSL Trigger: AAGGCTGCTTCTCACAGGGCACTGGATGACATTAGT...CCACACCCACCCCCTCAGTCCATATCTGCACTTGCTCATAGGCCGGTTCCTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR CCA 90 bp | GATCAGCAGGAGAGAGAGACGCTAACGTGGCTTCTGAGAGCCAGGCTCTGCGGCAAATTCATAATCTTCTaGATACCAGCGTCTGCACAG | + |
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Preference number: 4 (lower is better) Translates to: DQQERETLTWLLRARLCGKFIIF*IPASAQ Trigger: CTGTGCAGACGCTGGTATCCAGAAGATTATGAATTT...GCCGCAGAGCCTGGCTCTCAGAAGCCACGTTAGCGTCTCTCTCTCCTGCTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR TCA 90 bp | CGATCAGCAGGAGAGAGAGACGCTAACGTGGCTTCTGAGAGCCAGGCTCTGCGGGCCATCTCAATAATCTaGTCCTTCTCAATATCCAAT | + |
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Preference number: 4 (lower is better) Translates to: RSAGERDANVASESQALRAISII*SFSISN Trigger: ATTGGATATTGAGAAGGATCAGATTATTGAGATGGC...CCGCAGAGCCTGGCTCTCAGAAGCCACGTTAGCGTCTCTCTCTCCTGCTGATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR GCA 90 bp | CAAGACCTCAGCTGGTCTCTCTGGGACTTCAGTTACTCGAACCACTACTATAGATGCACCAGTCTGACATaGTGTCCAGCAACTCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: QDLSWSLWDFSYSNHYYRCTSLT*CPATRP Trigger: CGGACGAGTTGCTGGACAGCATGTCAGACTGGTGCA...TCTATAGTAGTGGTTCGAGTAACTGAAGTCCCAGAGAGACCAGCTGAGGTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217037.2 |
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| CDS-3UTR GCA 90 bp | GGGGTGATGCTGAGTTCATGTGTGTTTCTCAGATCGAGTTCCAAGCCATTGCACTCCCGTGATGCTCCTTaGACCAGTCTGACATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GVMLSSCVFLRSSSKPLHSRDAP*TSLTCC Trigger: ACAGCATGTCAGACTGGTGCAAGGAGCATCACGGGA...GTGCAATGGCTTGGAACTCGATCTGAGAAACACACATGAACTCAGCATCACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217037.2 |
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| CDS-3UTR TCA 90 bp | CCTATGAGCAAGTGCAGATATGGACTGAGGGGGTGGGTGTGGCCTGAAGCTTACAGTGAAGATGTTTCATaGACTGGGGCATGTGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: PMSKCRYGLRGWVWPEAYSEDVS*TGACVC Trigger: ACAAACACATGCCCCAGTTCATGAAACATCTTCACT...GTAAGCTTCAGGCCACACCCACCCCCTCAGTCCATATCTGCACTTGCTCATAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR GCA 90 bp | CCTATGAGCAAGTGCAGATATGGACTGAGGGGGTGGGTGTGGCCTGAAGCTTACAGCAGCCTTCTTCGGTaGAAATTCATAATCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PMSKCRYGLRGWVWPEAYSSLLR*KFIIFW Trigger: CCAGAAGATTATGAATTTGCACCGAAGAAGGCTGCT...GTAAGCTTCAGGCCACACCCACCCCCTCAGTCCATATCTGCACTTGCTCATAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR TCA 90 bp | GAGCACTCCGAATCAGGTGAGTGGAAGGCAAGACCTCAGCTGGTCTCTCTGGGAGCCATCTCAATAATCTaGTCCTTCTCAATATCCAAT | + |
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Preference number: 4 (lower is better) Translates to: EHSESGEWKARPQLVSLGAISII*SFSISN Trigger: ATTGGATATTGAGAAGGATCAGATTATTGAGATGGC...TCCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATTCGGAGTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS-3UTR TCA 90 bp | GGCCTGAAGCTTACAAAGGAGCCGCTGTCAGAACAGAAACAGCAGGTTAGAAGACTTATCTGCATGAACTaGGTTCCCTGCAAGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: GLKLTKEPLSEQKQQVRRLICMN*VPCKWT Trigger: TGTCCACTTGCAGGGAACTCAGTTCATGCAGATAAG...TCTTCTAACCTGCTGTTTCTGTTCTGACAGCGGCTCCTTTGTAAGCTTCAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR GCA 90 bp | CTTACAAAGGAGCCGCTGTCAGAACAGAAACAGCAGGTTAGAAGAAACGGAAGATCATACTCTGCCTGCTaGAGTGTGACTGTGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LTKEPLSEQKQQVRRNGRSYSAC*SVTVLS Trigger: GGAGAGCACAGTCACACTGCAGCAGGCAGAGTATGA...TCTTCCGTTTCTTCTAACCTGCTGTTTCTGTTCTGACAGCGGCTCCTTTGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR CCA 90 bp | AAAAGGAACCGGCCTATGAGCAAGTGCAGATATGGACTGAGGGGGTGGGTGTGGAGATGTTTCATGAACTaGGGCATGTGTTTGTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: KRNRPMSKCRYGLRGWVWRCFMN*GMCLSR Trigger: TCTTGACAAACACATGCCCCAGTTCATGAAACATCT...CCACACCCACCCCCTCAGTCCATATCTGCACTTGCTCATAGGCCGGTTCCTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR GCA 90 bp | ACTAGCTTTATTTATTATTCAAATAAAAGGAACCGGCCTATGAGCAAGTGCAGACAGAAATTCATACTCTaGCTGCTGCAGTGTGACTGT | + |
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Preference number: 4 (lower is better) Translates to: TSFIYYSNKRNRPMSKCRQKFIL*LLQCDC Trigger: ACAGTCACACTGCAGCAGGCAGAGTATGAATTTCTG...TCTGCACTTGCTCATAGGCCGGTTCCTTTTATTTGAATAATAAATAAAGCTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS GCA 90 bp | CACCCAGACCATTCGCTGAGCCATGCTCTCCCCTGCCGCCATGGCTaGGCTACCTTCGCTGACACCTCGCGCCCCGAACTGCCCGCGCCT | + |
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Preference number: 5 (lower is better) Translates to: HPDHSLSHALPCRHG*ATFADTSRPELPAP Trigger: AGGCGCGGGCAGTTCGGGGCGCGAGGTGTCAGCGAAGGTAGCGCAGCCATGGCGGCAGGGGAGAGCATGGCTCAGCGAATGGTCTGGGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034524.5 ENSMUST00000213895.2 ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS GCA 90 bp | ACCCTCCAGGTCCACCCAGACCATTCGCTGAGCCATGCTCTCCCCTaGCGCCATGGCTGCGCTACCTTCGCTGACACCTCGCGCCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: TLQVHPDHSLSHALP*RHGCATFADTSRPE Trigger: TTCGGGGCGCGAGGTGTCAGCGAAGGTAGCGCAGCCATGGCGGCAGGGGAGAGCATGGCTCAGCGAATGGTCTGGGTGGACCTGGAGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213895.2 |
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| CDS GCA 90 bp | CATCTCCAGGTCCACCCAGACCATTCGCTGAGCCATGCTCTCCCCTaGCGCCATGGCTGCGCTACCTTCGCTGACACCTCGCGCCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: HLQVHPDHSLSHALP*RHGCATFADTSRPE Trigger: TTCGGGGCGCGAGGTGTCAGCGAAGGTAGCGCAGCCATGGCGGCAGGGGAGAGCATGGCTCAGCGAATGGTCTGGGTGGACCTGGAGATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034524.5 ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS TCA 90 bp | TTGATAATCAGGTTGGGACCCTCCAGGTCCACCCAGACCATTCGCTaGGCCATGCTCTCCCCTGCCGCCATGGCTGCGCTACCTTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: LIIRLGPSRSTQTIR*AMLSPAAMAALPSL Trigger: CAGCGAAGGTAGCGCAGCCATGGCGGCAGGGGAGAGCATGGCTCAGCGAATGGTCTGGGTGGACCTGGAGGGTCCCAACCTGATTATCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213895.2 |
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| CDS TCA 90 bp | TCAATATCCAATCCTGTCATCTCCAGGTCCACCCAGACCATTCGCTaGGCCATGCTCTCCCCTGCCGCCATGGCTGCGCTACCTTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: SISNPVISRSTQTIR*AMLSPAAMAALPSL Trigger: CAGCGAAGGTAGCGCAGCCATGGCGGCAGGGGAGAGCATGGCTCAGCGAATGGTCTGGGTGGACCTGGAGATGACAGGATTGGATATTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034524.5 ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS-3UTR CAA 90 bp | GATCAGCAGGAGAGAGAGACGCTAACGTGGCTTCTGAGAGCCAGGCTCTGCGGCCTCTCCTTCACTGCCTaGGTAAGACCAGACTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: DQQERETLTWLLRARLCGLSFTA*VRPDFP Trigger: CGGGAAGTCTGGTCTTACCAAGGCAGTGAAGGAGAG...GCCGCAGAGCCTGGCTCTCAGAAGCCACGTTAGCGTCTCTCTCTCCTGCTGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR CAA 90 bp | GATCAGCAGGAGAGAGAGACGCTAACGTGGCTTCTGAGAGCCAGGCTCTGCGGCAACTCGTCCGGCTGTTaGATAATCAGGTTGGGACCT | + |
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Preference number: 5 (lower is better) Translates to: DQQERETLTWLLRARLCGNSSGC*IIRLGP Trigger: AGGTCCCAACCTGATTATCAAACAGCCGGACGAGTT...GCCGCAGAGCCTGGCTCTCAGAAGCCACGTTAGCGTCTCTCTCTCCTGCTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS-3UTR CAA 90 bp | AGCACTCCGAATCAGGTGAGTGGAAGGCAAGACCTCAGCTGGTCTCTCTGGGACAACTCGTCCGGCTGTTaGATAATCAGGTTGGGACCT | + |
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Preference number: 5 (lower is better) Translates to: STPNQVSGRQDLSWSLWDNSSGC*IIRLGP Trigger: AGGTCCCAACCTGATTATCAAACAGCCGGACGAGTT...GTCCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATTCGGAGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS TCA 90 bp | TGCCTTGGTAAGACCAGACTTCCCGTGATGCTCCTTGCACCAGTCTaGCATGCTGTCCAGCAACTCGTCCGGCTGTTTGATAATCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: CLGKTRLPVMLLAPV*HAVQQLVRLFDNQV Trigger: AACCTGATTATCAAACAGCCGGACGAGTTGCTGGACAGCATGTCAGACTGGTGCAAGGAGCATCACGGGAAGTCTGGTCTTACCAAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034524.5 ENSMUST00000213895.2 ENSMUST00000217037.2 |
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| CDS-3UTR CAA 90 bp | AAGGCAAGACCTCAGCTGGTCTCTCTGGGACTTCAGTTACTCGAACCACTACTACTCTCCTTCACTGCCTaGGTAAGACCAGACTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: KARPQLVSLGLQLLEPLLLSFTA*VRPDFP Trigger: CGGGAAGTCTGGTCTTACCAAGGCAGTGAAGGAGAG...TAGTAGTGGTTCGAGTAACTGAAGTCCCAGAGAGACCAGCTGAGGTCTTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217037.2 |
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| CDS GCA 90 bp | GGAGTCTGCTGTCGTACAAAGGACAGAAATTCATACTCTGCCTGCTaGAGTGTGACTGTGCTCTCCTTCACTGCCTTGGTAAGACCAGAC | + |
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Preference number: 5 (lower is better) Translates to: GVCCRTKDRNSYSAC*SVTVLSFTALVRPD Trigger: GTCTGGTCTTACCAAGGCAGTGAAGGAGAGCACAGTCACACTGCAGCAGGCAGAGTATGAATTTCTGTCCTTTGTACGACAGCAGACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034524.5 ENSMUST00000213895.2 |
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| CDS-3UTR CAA 90 bp | AATCAGGTGAGTGGAAGGCAAGACCTCAGCTGGTCTCTCTGGGACTTCAGTTACAACTCGTCCGGCTGTTaGATAATCAGGTTGGGACCT | + |
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Preference number: 5 (lower is better) Translates to: NQVSGRQDLSWSLWDFSYNSSGC*IIRLGP Trigger: AGGTCCCAACCTGATTATCAAACAGCCGGACGAGTT...GTAACTGAAGTCCCAGAGAGACCAGCTGAGGTCTTGCCTTCCACTCACCTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217037.2 |
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| CDS TCA 90 bp | ACTACTATAGAAGACTATCTTCCCGTGATGCTCCTTGCACCAGTCTaGCATGCTGTCCAGCAACTCGTCCGGCTGTTTGATAATCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: TTIEDYLPVMLLAPV*HAVQQLVRLFDNQV Trigger: AACCTGATTATCAAACAGCCGGACGAGTTGCTGGACAGCATGTCAGACTGGTGCAAGGAGCATCACGGGAAGATAGTCTTCTATAGTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216470.2 |
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| CDS-3UTR CAA 90 bp | GGGTGTGGCCTGAAGCTTACAAAGGAGCCGCTGTCAGAACAGAAACAGCAGGTTAACTGGGGCATGTGTTaGTCAAGAAACTTCTTATCT | + |
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Preference number: 5 (lower is better) Translates to: GCGLKLTKEPLSEQKQQVNWGMC*SRNFLS Trigger: AGATAAGAAGTTTCTTGACAAACACATGCCCCAGTT...AACCTGCTGTTTCTGTTCTGACAGCGGCTCCTTTGTAAGCTTCAGGCCACACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS GCA 90 bp | TTCACTAATGTCATCCAGTGCCCTGTGAGAAGCAGCCTTCTTCGGTaGAAATTCATAATCTTCTGGATACCAGCGTCTGCACAGCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: FTNVIQCPVRSSLLR*KFIIFWIPASAQLF Trigger: AAAGAGCTGTGCAGACGCTGGTATCCAGAAGATTATGAATTTGCACCGAAGAAGGCTGCTTCTCACAGGGCACTGGATGACATTAGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS TCA 90 bp | ATGTTAAGATCAGAGTCAGTTATCAGGCAGGCCATCTCAATAATCTaGTCCTTCTCAATATCCAATCCTGTCATCTCCAGGTCCACCCAG | + |
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Preference number: 5 (lower is better) Translates to: MLRSESVIRQAISII*SFSISNPVISRSTQ Trigger: CTGGGTGGACCTGGAGATGACAGGATTGGATATTGAGAAGGATCAGATTATTGAGATGGCCTGCCTGATAACTGACTCTGATCTTAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034524.5 ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS GCA 72 bp | GACCCTCCAGGTCCACCCAGACCATTCGCTGAGCCATaGTCTCCCCTGCCGCCATGGCTGCGCTACCTTCGC | + |
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Preference number: 6 (lower is better) Translates to: DPPGPPRPFAEP*SPLPPWLRYLR Trigger: GCGAAGGTAGCGCAGCCATGGCGGCAGGGGAGAGCATGGCTCAGCGAATGGTCTGGGTGGACCTGGAGGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213895.2 |
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| CDS TCA 72 bp | AGGTTGGGACCCTCCAGGTCCACCCAGACCATTCGCTaGGCCATGCTCTCCCCTGCCGCCATGGCTGCGCTA | + |
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Preference number: 6 (lower is better) Translates to: RLGPSRSTQTIR*AMLSPAAMAAL Trigger: TAGCGCAGCCATGGCGGCAGGGGAGAGCATGGCTCAGCGAATGGTCTGGGTGGACCTGGAGGGTCCCAACCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213895.2 |
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| CDS GCA 72 bp | GTCCACCCAGACCATTCGCTGAGCCATGCTCTCCCCTaGCGCCATGGCTGCGCTACCTTCGCTGACACCTCG | + |
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Preference number: 6 (lower is better) Translates to: VHPDHSLSHALP*RHGCATFADTS Trigger: CGAGGTGTCAGCGAAGGTAGCGCAGCCATGGCGGCAGGGGAGAGCATGGCTCAGCGAATGGTCTGGGTGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034524.5 ENSMUST00000213895.2 ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS GCA 72 bp | TCATCTCCAGGTCCACCCAGACCATTCGCTGAGCCATaGTCTCCCCTGCCGCCATGGCTGCGCTACCTTCGC | + |
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Preference number: 6 (lower is better) Translates to: SSPGPPRPFAEP*SPLPPWLRYLR Trigger: GCGAAGGTAGCGCAGCCATGGCGGCAGGGGAGAGCATGGCTCAGCGAATGGTCTGGGTGGACCTGGAGATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034524.5 ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS TCA 72 bp | AATCCTGTCATCTCCAGGTCCACCCAGACCATTCGCTaGGCCATGCTCTCCCCTGCCGCCATGGCTGCGCTA | + |
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Preference number: 6 (lower is better) Translates to: NPVISRSTQTIR*AMLSPAAMAAL Trigger: TAGCGCAGCCATGGCGGCAGGGGAGAGCATGGCTCAGCGAATGGTCTGGGTGGACCTGGAGATGACAGGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034524.5 ENSMUST00000216470.2 ENSMUST00000217037.2 |
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| CDS CAA 72 bp | CAGTCTGACATGCTGTCCAGCAACTCGTCCGGCTGTTaGATAATCAGGTTGGGACCCTCCAGGTCCACCCAG | + |
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Preference number: 6 (lower is better) Translates to: QSDMLSSNSSGC*IIRLGPSRSTQ Trigger: CTGGGTGGACCTGGAGGGTCCCAACCTGATTATCAAACAGCCGGACGAGTTGCTGGACAGCATGTCAGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213895.2 |
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| CDS TCA 72 bp | AAGACCAGACTTCCCGTGATGCTCCTTGCACCAGTCTaGCATGCTGTCCAGCAACTCGTCCGGCTGTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: KTRLPVMLLAPV*HAVQQLVRLFD Trigger: ATCAAACAGCCGGACGAGTTGCTGGACAGCATGTCAGACTGGTGCAAGGAGCATCACGGGAAGTCTGGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034524.5 ENSMUST00000213895.2 ENSMUST00000217037.2 |
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| CDS GCA 72 bp | GAGTTCCCTGCAAGTGGACAGAGCCCCGGAGGAGTCTaGTGTCGTACAAAGGACAGAAATTCATACTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: EFPASGQSPGGV*CRTKDRNSYSA Trigger: GGCAGAGTATGAATTTCTGTCCTTTGTACGACAGCAGACTCCTCCGGGGCTCTGTCCACTTGCAGGGAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034524.5 ENSMUST00000213895.2 |
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| CDS GCA 72 bp | TTCTGCCTGCTGCAGTGTGACTGTGCTCTCCTTCACTaGCTTGGTAAGACCAGACTTCCCGTGATGCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: FCLLQCDCALLH*LGKTRLPVMLL Trigger: AAGGAGCATCACGGGAAGTCTGGTCTTACCAAGGCAGTGAAGGAGAGCACAGTCACACTGCAGCAGGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217037.2 |
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| CDS TCA 72 bp | GAAGACTATCTTCCCGTGATGCTCCTTGCACCAGTCTaGCATGCTGTCCAGCAACTCGTCCGGCTGTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: EDYLPVMLLAPV*HAVQQLVRLFD Trigger: ATCAAACAGCCGGACGAGTTGCTGGACAGCATGTCAGACTGGTGCAAGGAGCATCACGGGAAGATAGTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216470.2 |
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| CDS GCA 72 bp | CACTACTATAGAAGACTATCTTCCCGTGATGCTCCTTaGACCAGTCTGACATGCTGTCCAGCAACTCGTCCG | + |
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Preference number: 6 (lower is better) Translates to: HYYRRLSSRDAP*TSLTCCPATRP Trigger: CGGACGAGTTGCTGGACAGCATGTCAGACTGGTGCAAGGAGCATCACGGGAAGATAGTCTTCTATAGTAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216470.2 |
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| CDS GCA 72 bp | GTCATCCAGTGCCCTGTGAGAAGCAGCCTTCTTCGGTaGAAATTCATAATCTTCTGGATACCAGCGTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: VIQCPVRSSLLR*KFIIFWIPASA Trigger: TGCAGACGCTGGTATCCAGAAGATTATGAATTTGCACCGAAGAAGGCTGCTTCTCACAGGGCACTGGATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034524.5 |
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| CDS GCA 72 bp | TGTCGTACAAAGGACAGAAATTCATACTCTGCCTGCTaGAGTGTGACTGTGCTCTCCTTCACTGCCTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: CRTKDRNSYSAC*SVTVLSFTALV Trigger: TACCAAGGCAGTGAAGGAGAGCACAGTCACACTGCAGCAGGCAGAGTATGAATTTCTGTCCTTTGTACGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034524.5 ENSMUST00000213895.2 |
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| CDS CAA 72 bp | CAGTCTGACATGCTGTCCAGCAACTCGTCCGGCTGTTaGATAATCAGGTTGGGACCTTCAGCCAAAATGTTA | + |
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Preference number: 6 (lower is better) Translates to: QSDMLSSNSSGC*IIRLGPSAKML Trigger: TAACATTTTGGCTGAAGGTCCCAACCTGATTATCAAACAGCCGGACGAGTTGCTGGACAGCATGTCAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034524.5 ENSMUST00000216470.2 ENSMUST00000217037.2 |
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