Pregenerated sensors for REV1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026082Ensembl transcript IDs: ENSMUST00000027251.12, ENSMUST00000192594.6, ENSMUST00000193472.2, ENSMUST00000193697.6, ENSMUST00000194815.6
Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGAGTGCGTGGGTCTCTCCACCAGCGGAGTGAGTTGCTTCATGTaGGATTCTGGGAAATGCAGGGATACACTGTCCTCACTGGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: AECVGLSTSGVSCFM*DSGKCRDTLSSLEG Trigger: GCCCTCCAGTGAGGACAGTGTATCCCTGCATTTCCCAGAATCTCACATGAAGCAACTCACTCCGCTGGTGGAGAGACCCACGCACTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR TCA 90 bp | TGTTCCACAGTGCAGCAGAGTGCGTGGGTCTCTCCACCAGCGGAGTaGGTTGCTTCATGTGAGATTCTGGGAAATGCAGGGATACACTGT | + |
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Preference number: 1 (lower is better) Translates to: CSTVQQSAWVSPPAE*VASCEILGNAGIHC Trigger: ACAGTGTATCCCTGCATTTCCCAGAATCTCACATGAAGCAACTCACTCCGCTGGTGGAGAGACCCACGCACTCTGCTGCACTGTGGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR GCA 90 bp | AGGAGAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATCAGTaGTTCATCGCAGCTGACAGCCTCGATGCTGTGTGTGTAGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: RRKFRLCKDVRDVNQ*FIAADSLDAVCVAG Trigger: GCCAGCTACACACACAGCATCGAGGCTGTCAGCTGCGATGAAGCACTGATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193472.2 ENSMUST00000194815.6 |
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| 3UTR CCA 90 bp | CGTGGGTCTCTCCACCAGCGGAGTGAGTTGCTTCATGTGAGATTCTaGGAAATGCAGGGATACACTGTCCTCACTGGAGGGCAAAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: RGSLHQRSELLHVRF*EMQGYTVLTGGQSR Trigger: TCTACTTTGCCCTCCAGTGAGGACAGTGTATCCCTGCATTTCCCAGAATCTCACATGAAGCAACTCACTCCGCTGGTGGAGAGACCCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR GCA 90 bp | GACAGCCTCGATGCTGTGTGTGTAGCTGGCCAGTGTTTCATACATTaGCTGGGCAACTTCCCTGCATGCATGAAAATCATACGGAACAGC | + |
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Preference number: 1 (lower is better) Translates to: DSLDAVCVAGQCFIH*LGNFPACMKIIRNS Trigger: GCTGTTCCGTATGATTTTCATGCATGCAGGGAAGTTGCCCAGGCAATGTATGAAACACTGGCCAGCTACACACACAGCATCGAGGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193472.2 ENSMUST00000194815.6 |
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| 3UTR TCA 90 bp | TGCAGGGATACACTGTCCTCACTGGAGGGCAAAGTAGAGAACTGCTaGTCAAAACTTGACAAACTAGACGGGCACATGGAGAATGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: CRDTLSSLEGKVENC*SKLDKLDGHMENVE Trigger: CTCCACATTCTCCATGTGCCCGTCTAGTTTGTCAAGTTTTGATCAGCAGTTCTCTACTTTGCCCTCCAGTGAGGACAGTGTATCCCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR TCA 90 bp | GCCAACTTGTCTGGCTTCATAACTACAAGAAGCAATCTCAGCTTTTaGCAGAACAGAATCAATTCCATTTGTTTGTGTAGAATCTTGATT | + |
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Preference number: 1 (lower is better) Translates to: ANLSGFITTRSNLSF*QNRINSICLCRILI Trigger: AATCAAGATTCTACACAAACAAATGGAATTGATTCTGTTCTGTCAAAAGCTGAGATTGCTTCTTGTAGTTATGAAGCCAGACAAGTTGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR CAA 90 bp | CCACAGTGCAGCAGAGTGCGTGGGTCTCTCCACCAGCGGAGTGAGTaGCTTCATGTGAGATTCTGGGAAATGCAGGGATACACTGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: PQCSRVRGSLHQRSE*LHVRFWEMQGYTVL Trigger: GAGGACAGTGTATCCCTGCATTTCCCAGAATCTCACATGAAGCAACTCACTCCGCTGGTGGAGAGACCCACGCACTCTGCTGCACTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATCAGTGCTTCATCGCAGCACAGTGCAGCAGAGTaGGTGGGTCTCTCCACCAGC | + |
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Preference number: 2 (lower is better) Translates to: ESFVSARMSVTSISASSQHSAAE*VGLSTS Trigger: GCTGGTGGAGAGACCCACGCACTCTGCTGCACTGTG...CTGCGATGAAGCACTGATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR-3UTR CCA 90 bp | ACATTGCCTGGGCAACTTCCCTGCATGCATGAAAATCATACGGAACAGCTTGCAGTGCAGCAGAGTGCGTaGGTCTCTCCACCAGCGGAG | + |
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Preference number: 2 (lower is better) Translates to: TLPGQLPCMHENHTEQLAVQQSA*VSPPAE Trigger: CTCCGCTGGTGGAGAGACCCACGCACTCTGCTGCAC...TGCAAGCTGTTCCGTATGATTTTCATGCATGCAGGGAAGTTGCCCAGGCAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR-3UTR TCA 90 bp | AAACTCCTCAGGAGAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATCAGTCTCCACCAGCGGAGTaGGTTGCTTCATGTGAGATT | + |
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Preference number: 2 (lower is better) Translates to: KLLRRKFRLCKDVRDVNQSPPAE*VASCEI Trigger: AATCTCACATGAAGCAACTCACTCCGCTGGTGGAGA...CTGATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTCTCCTGAGGAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR-3UTR GCA 90 bp | AAACTCCTCAGGAGAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATCAGATATCTGTTCCACAGTaGAGCAGAGTGCGTGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: KLLRRKFRLCKDVRDVNQISVPQ*SRVRGS Trigger: AGACCCACGCACTCTGCTGCACTGTGGAACAGATAT...CTGATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTCTCCTGAGGAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR-3UTR GCA 90 bp | AACTCCTCAGGAGAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATCAGTCCTGGGCAACTTCCCTaGATGCATGAAAATCATACG | + |
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Preference number: 2 (lower is better) Translates to: NSSGESFVSARMSVTSISPGQLP*MHENHT Trigger: CGTATGATTTTCATGCATGCAGGGAAGTTGCCCAGG...ACTGATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTCTCCTGAGGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193472.2 ENSMUST00000194815.6 |
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| 3UTR-3UTR GCA 90 bp | AAACTCCTCAGGAGAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATCAGCCTGGGCAACTTCCCTaGATGCATGAAAATCATACG | + |
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Preference number: 2 (lower is better) Translates to: KLLRRKFRLCKDVRDVNQPGQLP*MHENHT Trigger: CGTATGATTTTCATGCATGCAGGGAAGTTGCCCAGG...CTGATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTCTCCTGAGGAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193472.2 ENSMUST00000194815.6 |
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| 3UTR-3UTR GCA 90 bp | TGCAAACTCCTCAGGAGAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATGGCAACTTCCCTGCATaGATGAAAATCATACGGAAC | + |
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Preference number: 2 (lower is better) Translates to: CKLLRRKFRLCKDVRDVNGNFPA*MKIIRN Trigger: GTTCCGTATGATTTTCATGCATGCAGGGAAGTTGCC...ATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTCTCCTGAGGAGTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193472.2 ENSMUST00000194815.6 |
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| 3UTR-3UTR CCA 90 bp | GATTCTCCCATACTGATGAATCTGGTATATCTGTTCCACAGTGCAGCAGAGTGCCTTCATGTGAGATTCTaGGAAATGCAGGGATACACT | + |
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Preference number: 2 (lower is better) Translates to: DSPILMNLVYLFHSAAECLHVRF*EMQGYT Trigger: AGTGTATCCCTGCATTTCCCAGAATCTCACATGAAG...GCACTCTGCTGCACTGTGGAACAGATATACCAGATTCATCAGTATGGGAGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTAATGCCAACTTGTCTGGCTTCATAACTACAAGAAGCAATCTCAGCTTTGTGAGTTGCTTCATGTaGGATTCTGGGAAATGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VLNANLSGFITTRSNLSFVSCFM*DSGKCR Trigger: CCTGCATTTCCCAGAATCTCACATGAAGCAACTCAC...AAAGCTGAGATTGCTTCTTGTAGTTATGAAGCCAGACAAGTTGGCATTAAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTAATGCCAACTTGTCTGGCTTCATAACTACAAGAAGCAATCTCAGCTTTCTGCTGATCAAAACTTaGCAAACTAGACGGGCACAT | + |
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Preference number: 2 (lower is better) Translates to: VLNANLSGFITTRSNLSFLLIKT*QTRRAH Trigger: ATGTGCCCGTCTAGTTTGTCAAGTTTTGATCAGCAG...AAAGCTGAGATTGCTTCTTGTAGTTATGAAGCCAGACAAGTTGGCATTAAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR TCA 72 bp | GTGCAGCAGAGTGCGTGGGTCTCTCCACCAGCGGAGTaGGTTGCTTCATGTGAGATTCTGGGAAATGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: VQQSAWVSPPAE*VASCEILGNAG Trigger: CCCTGCATTTCCCAGAATCTCACATGAAGCAACTCACTCCGCTGGTGGAGAGACCCACGCACTCTGCTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR TCA 72 bp | GTGGGTCTCTCCACCAGCGGAGTGAGTTGCTTCATGTaGGATTCTGGGAAATGCAGGGATACACTGTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: VGLSTSGVSCFM*DSGKCRDTLSS Trigger: TGAGGACAGTGTATCCCTGCATTTCCCAGAATCTCACATGAAGCAACTCACTCCGCTGGTGGAGAGACCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR GCA 72 bp | ATGAATCTGGTATATCTGTTCCACAGTGCAGCAGAGTaGGTGGGTCTCTCCACCAGCGGAGTGAGTTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: MNLVYLFHSAAE*VGLSTSGVSCF Trigger: GAAGCAACTCACTCCGCTGGTGGAGAGACCCACGCACTCTGCTGCACTGTGGAACAGATATACCAGATTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| 3UTR GCA 72 bp | TTTCGTCTCTGCAAGGATGTCCGTGACGTCAATCAGTaGTTCATCGCAGCTGACAGCCTCGATGCTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: FRLCKDVRDVNQ*FIAADSLDAVC Trigger: ACACACAGCATCGAGGCTGTCAGCTGCGATGAAGCACTGATTGACGTCACGGACATCCTTGCAGAGACGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193472.2 ENSMUST00000194815.6 |
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| 3UTR-3UTR CAA 90 bp | AACTCCTCAGGAGAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATCAGTATCATACGGAACAGCTaGCAGATTAGGACACAGCTG | + |
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Preference number: 3 (lower is better) Translates to: NSSGESFVSARMSVTSISIIRNS*QIRTQL Trigger: CAGCTGTGTCCTAATCTGCAAGCTGTTCCGTATGAT...ACTGATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTCTCCTGAGGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193472.2 ENSMUST00000194815.6 |
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| 3UTR-3UTR CAA 90 bp | CTCCTCAGGAGAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATCAGTGCGTTCTTAATGCCAACTaGTCACCCAATTCCCAATTG | + |
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Preference number: 3 (lower is better) Translates to: LLRRKFRLCKDVRDVNQCVLNAN*SPNSQL Trigger: CAATTGGGAATTGGGTGACAAGTTGGCATTAAGAAC...GCACTGATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTCTCCTGAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194815.6 |
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| 3UTR-3UTR CAA 90 bp | AGCTGCAAACTCCTCAGGAGAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCCATTTGGTCTTGTCTTaGATTTCAATACGGAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: SCKLLRRKFRLCKDVRDVHLVLS*ISIRRA Trigger: TGCCCTCCGTATTGAAATCAAAGACAAGACCAAATG...GACGTCACGGACATCCTTGCAGAGACGAAACTTTCTCCTGAGGAGTTTGCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194815.6 |
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| 3UTR TCA 72 bp | CAATTCCAACAGAGGCAGCACATTTGGTCTTGTCTTTaGTTTCAATACGGAGGGCAGCTGCAAACTCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: QFQQRQHIWSCL*FQYGGQLQTPQ Trigger: CTGAGGAGTTTGCAGCTGCCCTCCGTATTGAAATCAAAGACAAGACCAAATGTGCTGCCTCTGTTGGAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194815.6 |
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| 3UTR GCA 72 bp | TGGCCAGTGTTTCATACATTGCCTGGGCAACTTCCCTaGATGCATGAAAATCATACGGAACAGCTTGCAGAT | + |
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Preference number: 3 (lower is better) Translates to: WPVFHTLPGQLP*MHENHTEQLAD Trigger: ATCTGCAAGCTGTTCCGTATGATTTTCATGCATGCAGGGAAGTTGCCCAGGCAATGTATGAAACACTGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193472.2 ENSMUST00000194815.6 |
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| 3UTR GCA 72 bp | GATGCTGTGTGTGTAGCTGGCCAGTGTTTCATACATTaGCTGGGCAACTTCCCTGCATGCATGAAAATCATA | + |
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Preference number: 3 (lower is better) Translates to: DAVCVAGQCFIH*LGNFPACMKII Trigger: TATGATTTTCATGCATGCAGGGAAGTTGCCCAGGCAATGTATGAAACACTGGCCAGCTACACACACAGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193472.2 ENSMUST00000194815.6 |
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| CDS-3UTR GCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCCGCGTTGCTCTTCTCTaGCCTCTTCTCCTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQARVALL*PLLLLG Trigger: ACCCAGGAGGAGAAGAGGGCAGAGAAGAGCAACGCG...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR TCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCACTGAGGTTCAGCCGTaGCTGTCCACTGACAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGTEVQP*LSTDRR Trigger: TCTCCTGTCAGTGGACAGTCACGGCTGAACCTCAGT...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCTGCAGTCCGAGGGTTTaGATGGCACTGAAGGCGCTA | + |
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Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGCSPRV*MALKAL Trigger: TAGCGCCTTCAGTGCCATCCAAACCCTCGGACTGCA...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCTTTCTTCTTTCCACGTaGCTCTCCCTGCTGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAFLLST*LSLLSG Trigger: GCCGCTCAGCAGGGAGAGCCACGTGGAAAGAAGAAA...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR TCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCTGCATCACACAGCTCTaGTGTCTGGGTGAGCTCAAC | + |
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Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGCITQL*CLGELN Trigger: GTTGAGCTCACCCAGACATCAGAGCTGTGTGATGCA...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR TCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCGCTTTCAGCTCCTTTTaGAGCTCAGCAGGAAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGAFSSF*SSAGRA Trigger: TGCCCTTCCTGCTGAGCTTCAAAAGGAGCTGAAAGC...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR GCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCGTGCTGTGTTGCAAGTaGTGCACTGTGCAGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAVLCCK*CTVQSL Trigger: CAGAGACTGCACAGTGCAGCACTTGCAACACAGCAC...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR TCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCAGTGCTTTTTGTGCTTaGAGGCCCCTGAACAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQASAFCA*RPLNSG Trigger: TCCACTGTTCAGGGGCCTTCAAGCACAAAAAGCACT...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR TCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCGGGTTTGGATGGCACTaGAGGCGCTACTTTACTAAG | + |
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Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAGFGWH*RRYFTK Trigger: CTTAGTAAAGTAGCGCCTTCAGTGCCATCCAAACCC...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR TCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCAAGCTTAGATTCCATTaGACGTCCAACTCCCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAKLRFH*TSNSRQ Trigger: CTGCCGGGAGTTGGACGTTCAATGGAATCTAAGCTT...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR TCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCGAGAAGAGGCTTGACTaGGCTGATGGACGACTTGAA | + |
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Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGEKRLD*ADGRLE Trigger: TTCAAGTCGTCCATCAGCTCAGTCAAGCCTCTTCTC...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR TCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCGTCAATCTGGGATGGTaGTGGGACCTCTATACTGAG | + |
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Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGVNLGW*WDLYTE Trigger: CTCAGTATAGAGGTCCCATCACCATCCCAGATTGAC...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR GCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCACTCCGCAAAGCATCTaGACTTCTGGTGCTGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGTPQSI*TSGAVL Trigger: CAACACAGCACCAGAAGTGCAGATGCTTTGCGGAGT...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCTCTATTGCTTGGACCTaGCCCAGGATCCTCAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQASIAWT*PRILRF Trigger: AAACCTGAGGATCCTGGGCCAGGTCCAAGCAATAGA...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCCACAGCTCTGATGTCTaGGTGAGCTCAACACTGACA | + |
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Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAHSSDV*VSSTLT Trigger: TGTCAGTGTTGAGCTCACCCAGACATCAGAGCTGTG...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCGCACTATCTGTTGCCTaGTCCAGAGTTACAGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAALSVA*SRVTVL Trigger: CAGGACTGTAACTCTGGACCAGGCAACAGATAGTGC...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR TCA 90 bp | GTGCGTGGGTCTCTCCACCAGCGGAGTGAGTTGCTTCATGTGAGATTCTGGGAATGCATCACACAGCTCTaGTGTCTGGGTGAGCTCAAC | + |
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Preference number: 4 (lower is better) Translates to: VRGSLHQRSELLHVRFWECITQL*CLGELN Trigger: GTTGAGCTCACCCAGACATCAGAGCTGTGTGATGCA...TTCCCAGAATCTCACATGAAGCAACTCACTCCGCTGGTGGAGAGACCCACGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| CDS-3UTR TCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCGGTTTCTTGGCTTTCTaGAGTTGGAAGAGATCACGG | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAGFLAF*SWKRSR Trigger: CCGTGATCTCTTCCAACTTCAGAAAGCCAAGAAACC...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR TCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCGCTGGTGGCTTTAGCTaGAGTAAAGGATTCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAAGGFS*SKGFFG Trigger: GCCAAAGAATCCTTTACTTCAGCTAAAGCCACCAGC...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR TCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCAGGTCTTCACATCACTaGATTCCACAGCTCCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQARSSHH*IPQLQL Trigger: TAGCTGGAGCTGTGGAATTCAGTGATGTGAAGACCT...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCCTGGGCAACTTCCCTaGATGCATGAAAATCATACG | + |
|
Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGPGQLP*MHENHT Trigger: CGTATGATTTTCATGCATGCAGGGAAGTTGCCCAGG...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCAACCTATACAGCATCTaGCCTGTCTTGGGGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGNLYSI*PVLGPN Trigger: ATTTGGCCCCAAGACAGGGCAGATGCTGTATAGGTT...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCGCAACACCCCTGAACTaGAGCCATTTACTGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAATPLN*SHLLVL Trigger: AAGAACCAGTAAATGGCTGCAGTTCAGGGGTGTTGC...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCAAGCATCTGCACTTCTaGTGCTGTGTTGCAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAKHLHF*CCVASA Trigger: AGCACTTGCAACACAGCACCAGAAGTGCAGATGCTT...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| 3UTR CAA 72 bp | AGCAGAGTGCGTGGGTCTCTCCACCAGCGGAGTGAGTaGCTTCATGTGAGATTCTGGGAAATGCAGGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: SRVRGSLHQRSE*LHVRFWEMQGY Trigger: GTATCCCTGCATTTCCCAGAATCTCACATGAAGCAACTCACTCCGCTGGTGGAGAGACCCACGCACTCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
||
| CDS-3UTR GCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCAACTCCACTAAATATTaGAGACGCCGTCCCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGNSTKY*RRRPIL Trigger: AAGGATGGGACGGCGTCTGCAATATTTAGTGGAGTT...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCGTCTTCATTCCAGCTaGTCAGTCCATTTGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGRLHSS*SVHLLS Trigger: TGAAAGCAAATGGACTGAGCAGCTGGAATGAAGACG...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCGAGTCAGAACAGAAGTaGTTTTTGTGCTTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGESEQK*FLCLKA Trigger: GGCCTTCAAGCACAAAAAGCACTTCTGTTCTGACTC...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCGGCAACTTCCCTGCATaGATGAAAATCATACGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGGNFPA*MKIIRN Trigger: GTTCCGTATGATTTTCATGCATGCAGGGAAGTTGCC...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCTGCTGTGTGTGTAGCTaGCCAGTGTTTCATACATTG | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQACCVCS*PVFHTL Trigger: CAATGTATGAAACACTGGCCAGCTACACACACAGCA...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR TCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCTTCCATGTTGAGATGTaGTGCAGTCTTGAACGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGFHVEM*CSLERE Trigger: TTCTCGTTCAAGACTGCATCACATCTCAACATGGAA...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR TCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCCCACTGGTTTTCCTTTaGGATCTGGTCTATTTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAPLVFL*DLVYFV Trigger: TACGAAATAGACCAGATCTCAAAGGAAAACCAGTGG...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCCTGACCATCTGGCTTTaGTTTCTTAGTTGCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQALTIWL*FLSCHS Trigger: AGAATGGCAACTAAGAAAGCAAAGCCAGATGGTCAG...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCGCCATGGTCAAACACTaGAAATCTCCACAAGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAAMVKH*KSPQVL Trigger: TAAGACTTGTGGAGATTTGCAGTGTTTGACCATGGC...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCTGTGTTCCTCTTCTGTaGGTTTCTTGGCTTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQACVPLL*VSWLSE Trigger: TTCAGAAAGCCAAGAAACCCACAGAAGAGGAACACA...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCGCTTCTAAAACAGACTaGTCAATCTGGGATGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAASKTD*SIWDGD Trigger: ATCACCATCCCAGATTGACCAGTCTGTTTTAGAAGC...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CCA 90 bp | TGCAAACTCCTCAGGAGAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATGGTAGGACATCACTCTaGGCAGGAGCCAGGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CKLLRRKFRLCKDVRDVNGRTSL*AGARVP Trigger: TGGAACCCTGGCTCCTGCCCAGAGTGATGTCCTACC...ATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTCTCCTGAGGAGTTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194815.6 |
||
| CDS-3UTR TCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCAATAGAAATCTGAAATaGAGTTGCAGTCCGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGNRNLK*SCSPRV Trigger: AACCCTCGGACTGCAACTTCATTTCAGATTTCTATT...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR TCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCATTTCGTATACCCACTaGTACAAAGAAGCAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAISYTH*YKEAVH Trigger: ATGGACTGCTTCTTTGTATCAGTGGGTATACGAAAT...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR TCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCAGCAATCTCAGCTTTTaGCAGAACAGAATCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQASNLSF*QNRINS Trigger: GGAATTGATTCTGTTCTGTCAAAAGCTGAGATTGCT...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR TCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCATAGTTGATCTCGGCTaGAACAGATTTTCGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAIVDLG*NRFSFL Trigger: AAGGAACGAAAATCTGTTTCAGCCGAGATCAACTAT...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR TCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCACCTTATTCCATAGTTaGTCTCGGCTGAAACAGATT | + |
|
Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGTLFHS*SRLKQI Trigger: AATCTGTTTCAGCCGAGATCAACTATGGAATAAGGT...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR TCA 90 bp | GAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATCAGTGCTTCATCGCAGTGGCTCCGCAGTGGTTaGGATGCCAACAGCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESFVSARMSVTSISASSQWLRSG*DANSIE Trigger: TTCAATGCTGTTGGCATCTCAACCACTGCGGAGCCA...CTGCGATGAAGCACTGATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194815.6 |
||
| CDS-3UTR TCA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCTGCTGTAAAACCACCTaGACATTGTCAAGAATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGCCKTT*TLSRIK Trigger: CTTTATTCTTGACAATGTTCAGGTGGTTTTACAGCA...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | GGCAGCTGCAAACTCCTCAGGAGAAAGTTTCGTCTCTGCAAGGATGTCCGTGACATCTGGTATATCTGCTaGTTTTCCTCTCAGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSCKLLRRKFRLCKDVRDIWYIC*FSSQGS Trigger: AGAGCCCTGAGAGGAAAAGCAGCAGATATACCAGAT...GTCACGGACATCCTTGCAGAGACGAAACTTTCTCCTGAGGAGTTTGCAGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194815.6 |
||
| CDS-3UTR GCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCATTTTAGTGTTACTGTaGAAAGATGGTGAGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQAILVLL*KDGERE Trigger: TTCTCTCTCACCATCTTTGCACAGTAACACTAAAAT...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCCTTTGCTTTCTTAGTTaGCATTCTAGCAAGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HFANTSQALLAQRREPQALCFLS*HSSKKN Trigger: ATTCTTCTTGCTAGAATGGCAACTAAGAAAGCAAAG...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CCA 90 bp | TGCAAACTCCTCAGGAGAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATTCAATGGCTCCGCAGTaGTTGAGATGCCAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CKLLRRKFRLCKDVRDVNSMAPQ*LRCQQH Trigger: ATGCTGTTGGCATCTCAACCACTGCGGAGCCATTGA...ATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTCTCCTGAGGAGTTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194815.6 |
||
| CDS-3UTR CCA 90 bp | TGGGAAATGCAGGGATACACTGTCCTCACTGGAGGGCAAAGTAGAGAACTGCTGACTTGTAACAGCCACTaGTTTTCCTTTGAGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WEMQGYTVLTGGQSRELLTCNSH*FSFEIW Trigger: CCAGATCTCAAAGGAAAACCAGTGGCTGTTACAAGT...CAGCAGTTCTCTACTTTGCCCTCCAGTGAGGACAGTGTATCCCTGCATTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATCAGTGCTTCATCGCAGCCACTGGTTTTCCTTTaGGATCTGGTCTATTTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: ESFVSARMSVTSISASSQPLVFL*DLVYFV Trigger: TACGAAATAGACCAGATCTCAAAGGAAAACCAGTGG...CTGCGATGAAGCACTGATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATCAGTGCTTCATCGCAAGATGCCAACAGCATTaGATGGTAGGACATCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKFRLCKDVRDVNQCFIARCQQH*MVGHHS Trigger: AGAGTGATGTCCTACCATTCAATGCTGTTGGCATCT...TGCGATGAAGCACTGATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194815.6 |
||
| CDS-3UTR GCA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGCTGGGGGCTTCCATATaGCCCTGGCAGAGTTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MKTQSITIMHFANTSQALLGASI*PWQSFC Trigger: GCAAAAACTCTGCCAGGGGCATATGGAAGCCCCCAG...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| 3UTR CAA 72 bp | CCAATTCCAACAGAGGCAGCACATTTGGTCTTGTCTTaGATTTCAATACGGAGGGCAGCTGCAAACTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PIPTEAAHLVLS*ISIRRAAANSS Trigger: TGAGGAGTTTGCAGCTGCCCTCCGTATTGAAATCAAAGACAAGACCAAATGTGCTGCCTCTGTTGGAATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194815.6 |
||
| CDS-3UTR GCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAGCATCTGTGCGGAACTaGTCCTCCAGCTTCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAASVRN*SSSFWT Trigger: GGTCCAGAAGCTGGAGGAGCAGTTCCGCACAGATGC...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGCTTCTGGTGCTGTGTTaGAAGTGCTGCACTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MKTQSITIMHFANTSQALLLVLC*KCCTVQ Trigger: CTGCACAGTGCAGCACTTGCAACACAGCACCAGAAG...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | TGCCAACTTGTCTGGCTTCATAACTACAAGAAGCAATCTCAGCTTTTGACAGAAGCCAGGACACAAGTCTaGTTTTCCTCTCAGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CQLVWLHNYKKQSQLLTEARTQV*FSSQGS Trigger: AGAGCCCTGAGAGGAAAAGCAGACTTGTGTCCTGGC...TTCTGTCAAAAGCTGAGATTGCTTCTTGTAGTTATGAAGCCAGACAAGTTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
||
| CDS-3UTR CCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAGCCGTCCCATCCTTCTaGTTAGCAGCATCTGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAAVPSF*LAASVR Trigger: CCGCACAGATGCTGCTAACCAGAAGGATGGGACGGC...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR TCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAGCACTGTGCAGTCTCTaGAGTCCGCGTTGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAALCSL*SPRCSS Trigger: AGAAGAGCAACGCGGACTTCAGAGACTGCACAGTGC...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR TCA 90 bp | TGCAAACTCCTCAGGAGAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATAGCAATCTCAGCTTTTaGCAGAACAGAATCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: CKLLRRKFRLCKDVRDVNSNLSF*QNRINS Trigger: GGAATTGATTCTGTTCTGTCAAAAGCTGAGATTGCT...ATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTCTCCTGAGGAGTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194815.6 |
||
| CDS-3UTR TCA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGATCAGGGTCCACTTGTaGGAATGCTGGAAGGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: MKTQSITIMHFANTSQALIRVHL*ECWKGN Trigger: ATTGCCCTTCCAGCATTCTCACAAGTGGACCCTGAT...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGCATCTGCACTTCTGGTaGTGTGTTGCAAGTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MKTQSITIMHFANTSQALHLHFW*CVASAA Trigger: TGCAGCACTTGCAACACAGCACCAGAAGTGCAGATG...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGCCCTGGCAGAGTTTTTaGAGGACTGCTAAGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MKTQSITIMHFANTSQALPWQSF*RTAKQL Trigger: AAGCTGCTTAGCAGTCCTGCAAAAACTCTGCCAGGG...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CCA 90 bp | AAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATCAGTGCTTCATCGCAGCTTTTTCCTTTGAGATCTaGTCTATTTCGTATACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KFRLCKDVRDVNQCFIAAFSFEI*SISYTH Trigger: GTGGGTATACGAAATAGACCAGATCTCAAAGGAAAA...AGCTGCGATGAAGCACTGATTGACGTCACGGACATCCTTGCAGAGACGAAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
||
| CDS-3UTR GCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAAGGACTAACACTAGCTaGCAGATGTGCAGAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQARTNTS*QMCRER Trigger: CCGCTCTCTGCACATCTGGCAGCTAGTGTTAGTCCT...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCATTTGGCTCTATTGCTTaGACCTGGCCCAGGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAFGSIA*TWPRIL Trigger: GAGGATCCTGGGCCAGGTCCAAGCAATAGAGCCAAA...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CCA 90 bp | GTTCTTAATGCCAACTTGTCTGGCTTCATAACTACAAGAAGCAATCTCAGCTTTCACAGCTCTGATGTCTaGGTGAGCTCAACACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: VLNANLSGFITTRSNLSFHSSDV*VSSTLT Trigger: TGTCAGTGTTGAGCTCACCCAGACATCAGAGCTGTG...AAAGCTGAGATTGCTTCTTGTAGTTATGAAGCCAGACAAGTTGGCATTAAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| CDS-3UTR TCA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGGATTTACCCTGTTGTTaGGCTGTTTGGCTCTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: MKTQSITIMHFANTSQALDLPCC*AVWLYC Trigger: GCAATAGAGCCAAACAGCTCAACAACAGGGTAAATC...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR TCA 90 bp | AACTTCCCTGCATGCATGAAAATCATACGGAACAGCTTGCAGATTAGGACACAGATTTCGTATACCCACTaGTACAAAGAAGCAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NFPACMKIIRNSLQIRTQISYTH*YKEAVH Trigger: ATGGACTGCTTCTTTGTATCAGTGGGTATACGAAAT...CTGTGTCCTAATCTGCAAGCTGTTCCGTATGATTTTCATGCATGCAGGGAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
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| CDS-3UTR TCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCATTCCAGGGGTCTCTCTaGAGCCATTCCTTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAFQGSL*SHSFML Trigger: CAACATGAAGGAATGGCTTCAGAGAGACCCCTGGAA...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR GCA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGATCTGGTATATCTGCTaGTTTTCCTCTCAGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MKTQSITIMHFANTSQALIWYIC*FSSQGS Trigger: AGAGCCCTGAGAGGAAAAGCAGCAGATATACCAGAT...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR GCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAAATACGGAGGGCAGCTaGAAACTCCTCAGGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQANTEGS*KLLRRK Trigger: CTTTCTCCTGAGGAGTTTGCAGCTGCCCTCCGTATT...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGGACTCCACCGACTGCTaGATCAACCTTTTCATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: MKTQSITIMHFANTSQALDSTDC*INLFMY Trigger: ATACATGAAAAGGTTGATGCAGCAGTCGGTGGAGTC...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAGCATCTGCCCTGTCTTaGGGCCAAATTCTTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAASALS*GQILSG Trigger: TCCAGAAAGAATTTGGCCCCAAGACAGGGCAGATGC...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCATTCTATAGGGGCCCCTaGCTTCCGCACCATGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAFYRGP*LPHHDF Trigger: AAAATCATGGTGCGGAAGCCAGGGGCCCCTATAGAA...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAGCTTCCATATGCCCCTaGCAGAGTTTTTGCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAASICP*QSFCRT Trigger: AGTCCTGCAAAAACTCTGCCAGGGGCATATGGAAGC...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| 3UTR CAA 72 bp | AACTTCCCTGCATGCATGAAAATCATACGGAACAGCTaGCAGATTAGGACACAGCTGTTTAGCATATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NFPACMKIIRNS*QIRTQLFSISK Trigger: TTTGGATATGCTAAACAGCTGTGTCCTAATCTGCAAGCTGTTCCGTATGATTTTCATGCATGCAGGGAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193472.2 ENSMUST00000194815.6 |
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| CDS-3UTR TCA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGACTGTGCAAAGATGGTaGGAGAGAATTAGTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MKTQSITIMHFANTSQALTVQRW*ERISSV Trigger: CACAGAACTAATTCTCTCTCACCATCTTTGCACAGT...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR TCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCATTCTGGGAGAACCAATaGGGTTCTTCCTCTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAFWENQ*GSSSCS Trigger: GGAACAAGAGGAAGAACCTCATTGGTTCTCCCAGAA...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR GCA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGGCTGCTCAGTCCATTTaGTTTCACTTCACTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MKTQSITIMHFANTSQALAAQSI*FHFTFC Trigger: ACAGAAAGTGAAGTGAAAGCAAATGGACTGAGCAGC...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR GCA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGAGGTCACTTTCAGTGTaGTTCCATAAGTCTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: MKTQSITIMHFANTSQALRSLSV*FHKSAV Trigger: TACAGCAGACTTATGGAAGCACACTGAAAGTGACCT...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACACAGATGTACTGGTTaGCTGCTGATGAGTAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAHRCTG*LLMSSV Trigger: GACACTACTCATCAGCAGCCAACCAGTACATCTGTG...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR TCA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGACGAGAATAGAAATCTaGAATGAAGTTGCAGTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: MKTQSITIMHFANTSQALTRIEI*NEVAVR Trigger: TCGGACTGCAACTTCATTTCAGATTTCTATTCTCGT...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR TCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAAGTCTTTCTCCTCTATaGGGTCAGTGCAGTATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQASLSPL*GQCSIS Trigger: TGAGATACTGCACTGACCTCATAGAGGAGAAAGACT...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR GCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACAGTATCTCACAACCTaGAGGATGTCTTCTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAQYLTT*RMSSSI Trigger: GATGGAAGAAGACATCCTGCAGGTTGTGAGATACTG...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAGTGGTACTGACCATCTaGCTTTGCTTTCTTAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAVVLTI*LCFLSC Trigger: GCAACTAAGAAAGCAAAGCCAGATGGTCAGTACCAC...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTAAAACAGCTGCTCTaGCCTGGCAGTAAACTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQALKQLL*PGSKLD Trigger: ATCTAGTTTACTGCCAGGCCAGAGCAGCTGTTTTAG...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR TCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAGTCTCTGTAGGGTATTaGCAAACTCAGTCAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAVSVGY*QTQSIH Trigger: GTGAATTGACTGAGTTTGTCAATACCCTACAGAGAC...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR GCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCATTTTGCACTATCTGTTaGCTGGTCCAGAGTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAFCTIC*LVQSYS Trigger: ACTGTAACTCTGGACCAGGCAACAGATAGTGCAAAA...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAACTTGTAACAGCCACTaGTTTTCCTTTGAGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQATCNSH*FSFEIW Trigger: CCAGATCTCAAAGGAAAACCAGTGGCTGTTACAAGT...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR GCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCATTCTTTCTGGAGTTTTaGCATGGTCAAACACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAFFLEF*HGQTLQ Trigger: TTGCAGTGTTTGACCATGGCAAAACTCCAGAAAGAA...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCATTCCACAATCCATTCTaGTCGTATTACTTTTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAFHNPF*SYYFFP Trigger: GGGGAAAAAGTAATACGACCAGAATGGATTGTGGAA...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CCA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCATTTTCCTTTGAGATCTaGTCTATTTCGTATACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IMKTQSITIMHFANTSQAFSFEI*SISYTH Trigger: GTGGGTATACGAAATAGACCAGATCTCAAAGGAAAA...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS TCA 90 bp | CTGCACTTCTGGTGCTGTGTTGCAAGTGCTGCACTGTGCAGTCTCTaGAGTCCGCGTTGCTCTTCTCTGCCCTCTTCTCCTCCTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LHFWCCVASAALCSL*SPRCSSLPSSPPGW Trigger: CCACCCAGGAGGAGAAGAGGGCAGAGAAGAGCAACGCGGACTTCAGAGACTGCACAGTGCAGCACTTGCAACACAGCACCAGAAGTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CAA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCTGCTAGCAACACTGTaGCCCACAGGCACCAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGLLATL*PTGTKQ Trigger: TTGCTTGGTGCCTGTGGGCAACAGTGTTGCTAGCAG...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CAA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCGACCAGAGAAGAGGCTaGACTGAGCTGATGGACGAC | + |
|
Preference number: 5 (lower is better) Translates to: HFANTSQALLAQRREPQADQRRG*TELMDD Trigger: GTCGTCCATCAGCTCAGTCAAGCCTCTTCTCTGGTC...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CAA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCACTTCTGGTGCTGTGTaGCAAGTGCTGCACTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HFANTSQALLAQRREPQATSGAV*QVLHCA Trigger: TGCACAGTGCAGCACTTGCAACACAGCACCAGAAGT...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CAA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCAGCATCTGCCCTGTCTaGGGGCCAAATTCTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HFANTSQALLAQRREPQASICPV*GPNSFW Trigger: CCAGAAAGAATTTGGCCCCAAGACAGGGCAGATGCT...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CAA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCTGCTTTCAGCTCCTTTaGAAGCTCAGCAGGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGCFQLL*KLSRKG Trigger: GCCCTTCCTGCTGAGCTTCAAAAGGAGCTGAAAGCA...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS GCA 90 bp | TGTGGACTCCGCAAAGCATCTGCACTTCTGGTGCTGTGTTGCAAGTaGTGCACTGTGCAGTCTCTGAAGTCCGCGTTGCTCTTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: CGLRKASALLVLCCK*CTVQSLKSALLFSA Trigger: GGCAGAGAAGAGCAACGCGGACTTCAGAGACTGCACAGTGCAGCACTTGCAACACAGCACCAGAAGTGCAGATGCTTTGCGGAGTCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS GCA 90 bp | TTAGATTCCATTGAACGTCCAACTCCCGGCAGGTTAGTGACGAGCTaGCCTCGGATGAAATCGTCTACCTCGTCGGGCTGCAGGTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LDSIERPTPGRLVTS*PRMKSSTSSGCRWY Trigger: GTACCACCTGCAGCCCGACGAGGTAGACGATTTCATCCGAGGGCAGCTCGTCACTAACCTGCCGGGAGTTGGACGTTCAATGGAATCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CAA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCACACAGGATTGAAGTaGAGACTCTTCTGTGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGHTGLK*RLFCAA Trigger: GGCTGCACAGAAGAGTCTCAACTTCAATCCTGTGTG...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCCCAGGATCCTCAGGTTaGCACACAGGATTGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HFANTSQALLAQRREPQAPGSSG*HTGLKL Trigger: CAACTTCAATCCTGTGTGCAAACCTGAGGATCCTGG...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCAAGTGCTTTTTGTGCTaGAAGGCCCCTGAACAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGKCFLC*KAPEQW Trigger: CCACTGTTCAGGGGCCTTCAAGCACAAAAAGCACTT...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS GCA 90 bp | GTTCTGTGTGGACTCCGCAAAGCATCTGCACTTCTGGTGCTGTGTTaGAAGTGCTGCACTGTGCAGTCTCTGAAGTCCGCGTTGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLCGLRKASALLVLC*KCCTVQSLKSALLF Trigger: GAAGAGCAACGCGGACTTCAGAGACTGCACAGTGCAGCACTTGCAACACAGCACCAGAAGTGCAGATGCTTTGCGGAGTCCACACAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS CCA 90 bp | ACAGCTCCAGCTAGGTTGGGTGCTGCTGGTCTAAAACAGCTGCTCTaGCCTGGCAGTAAACTAGATAGGTCCTGTGCACCAGGGGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TAPARLGAAGLKQLL*PGSKLDRSCAPGVE Trigger: TTCTACCCCTGGTGCACAGGACCTATCTAGTTTACTGCCAGGCCAGAGCAGCTGTTTTAGACCAGCAGCACCCAACCTAGCTGGAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCATCATACGGAACAGCTaGCAGATTAGGACACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGIIRNS*QIRTQL Trigger: CAGCTGTGTCCTAATCTGCAAGCTGTTCCGTATGAT...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCGCCAGAAATACTTCCTaGTGTTCCTCTTCTGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HFANTSQALLAQRREPQAARNTS*CSSSVG Trigger: ACCCACAGAAGAGGAACACAAGGAAGTATTTCTGGC...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCGGTTTGCACACAGGATaGAAGTTGAGACTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGGLHTG*KLRLFC Trigger: ACAGAAGAGTCTCAACTTCAATCCTGTGTGCAAACC...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCTCCCTGCCTTTGTCTTaGATCATATGCTGCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGSLPLS*IICCFQ Trigger: CTGAAAGCAGCATATGATCAAAGACAAAGGCAGGGA...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCTCCTCTTGTCTTTCATaGCTGGTGGCTTTAGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGSSCLS*LVALAE Trigger: TTCAGCTAAAGCCACCAGCAATGAAAGACAAGAGGA...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS GCA 90 bp | AGGATCCTCAGGTTTGCACACAGGATTGAAGTTGAGACTCTTCTGTaGAGCCGACGGCTTGGTGTAGAGCTGATAGGGAGCAGAGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: RILRFAHRIEVETLL*SRRLGVELIGSRGQ Trigger: TTGTCCTCTGCTCCCTATCAGCTCTACACCAAGCCGTCGGCTGCACAGAAGAGTCTCAACTTCAATCCTGTGTGCAAACCTGAGGATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCTCTTTAAGGCACCATTaGAACTATGGGTGTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGSLRHH*NYGCVH Trigger: ATGGACACACCCATAGTTCAAATGGTGCCTTAAAGA...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCATTCACACTTCCATGTaGAGATGTGATGCAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGIHTSM*RCDAVL Trigger: CAAGACTGCATCACATCTCAACATGGAAGTGTGAAT...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CAA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCCATTTGGTCTTGTCTTaGATTTCAATACGGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HFANTSQALLAQRREPQAHLVLS*ISIRRA Trigger: TGCCCTCCGTATTGAAATCAAAGACAAGACCAAATG...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CAA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCACAGAGGCAGCACATTaGGTCTTGTCTTTGATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGTEAAH*VLSLIS Trigger: TGAAATCAAAGACAAGACCAAATGTGCTGCCTCTGT...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCAACCAACTGATTCACTaGAATACCAACCCCTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HFANTSQALLAQRREPQANQLIH*NTNPSH Trigger: ATGAGAGGGGTTGGTATTCAAGTGAATCAGTTGGTT...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCGAAGTAAAGGATTCTTaGGCACAGATGTACTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HFANTSQALLAQRREPQAEVKDS*AQMYWL Trigger: CAACCAGTACATCTGTGCCAAAGAATCCTTTACTTC...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS TCA 90 bp | TGCCCTCGGATGAAATCGTCTACCTCGTCGGGCTGCAGGTGGTACTaGCCATCTGGCTTTGCTTTCTTAGTTGCCATTCTAGCAAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CPRMKSSTSSGCRWY*PSGFAFLVAILARR Trigger: TCTTCTTGCTAGAATGGCAACTAAGAAAGCAAAGCCAGATGGTCAGTACCACCTGCAGCCCGACGAGGTAGACGATTTCATCCGAGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCAGATGTGATGCAGTCTaGAACGAGAATAGAAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: HFANTSQALLAQRREPQARCDAV*NENRNL Trigger: CAGATTTCTATTCTCGTTCAAGACTGCATCACATCT...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | GCACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCTGTCTCTGTAGGGTATaGACAAACTCAGTCAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: ALCKYLTSTAGTAQRAPGCLCRV*TNSVNS Trigger: TGAATTGACTGAGTTTGTCAATACCCTACAGAGACA...GCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS TCA 90 bp | ATCTCCACAAGTCTTAATCCCCAAAGATGCAAGCTTAGATTCCATTaGACGTCCAACTCCCGGCAGGTTAGTGACGAGCTGCCCTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ISTSLNPQRCKLRFH*TSNSRQVSDELPSD Trigger: ATCCGAGGGCAGCTCGTCACTAACCTGCCGGGAGTTGGACGTTCAATGGAATCTAAGCTTGCATCTTTGGGGATTAAGACTTGTGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | CACTTTGCAAATACCTCACAAGCACTGCTGGCACAGCGCAGAGAGCCCCAGGCCATAATACACATGGTATaGACCTCCATGCAACATCAT | + |
|
Preference number: 5 (lower is better) Translates to: HFANTSQALLAQRREPQAIIHMV*TSMQHH Trigger: ATGATGTTGCATGGAGGTCAATACCATGTGTATTAT...GGCCTGGGGCTCTCTGCGCTGTGCCAGCAGTGCTTGTGAGGTATTTGCAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | CTCCTCAGGAGAAAGTTTCGTCTCTGCAAGGATGTCCGTGACGTCAATCAGTGCGAGATGCCAACAGCATaGAATGGTAGGACATCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LLRRKFRLCKDVRDVNQCEMPTA*NGRTSL Trigger: GAGTGATGTCCTACCATTCAATGCTGTTGGCATCTC...GCACTGATTGACGTCACGGACATCCTTGCAGAGACGAAACTTTCTCCTGAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194815.6 |
||
| CDS CCA 90 bp | GTGATTTACCCTGTTGTTGAGCTGTTTGGCTCTATTGCTTGGACCTaGCCCAGGATCCTCAGGTTTGCACACAGGATTGAAGTTGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: VIYPVVELFGSIAWT*PRILRFAHRIEVET Trigger: AGTCTCAACTTCAATCCTGTGTGCAAACCTGAGGATCCTGGGCCAGGTCCAAGCAATAGAGCCAAACAGCTCAACAACAGGGTAAATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CAA 90 bp | TGGGAAATGCAGGGATACACTGTCCTCACTGGAGGGCAAAGTAGAGAACTGCTGGCCACTGGTTTTCCTTaGAGATCTGGTCTATTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: WEMQGYTVLTGGQSRELLATGFP*RSGLFR Trigger: ACGAAATAGACCAGATCTCAAAGGAAAACCAGTGGC...CAGCAGTTCTCTACTTTGCCCTCCAGTGAGGACAGTGTATCCCTGCATTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193472.2 |
||
| CDS TCA 90 bp | TGGTGTAGAGCTGATAGGGAGCAGAGGACAAGAGTCTCCCAGCTTTaGTGCTTTCCACAATCCATTCTGGTCGTATTACTTTTTCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: WCRADREQRTRVSQL*CFPQSILVVLLFPP Trigger: AGGGGGAAAAAGTAATACGACCAGAATGGATTGTGGAAAGCATCAAAGCTGGGAGACTCTTGTCCTCTGCTCCCTATCAGCTCTACACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027251.12 ENSMUST00000192594.6 |
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| CDS TCA 90 bp | ACTGATACAAAGAAGCAGTCCATATCAACGTGCATCACACAGCTCTaGTGTCTGGGTGAGCTCAACACTGACATAGTGCCTGTGTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TDTKKQSISTCITQL*CLGELNTDIVPVSV Trigger: AACTGACACAGGCACTATGTCAGTGTTGAGCTCACCCAGACATCAGAGCTGTGTGATGCACGTTGATATGGACTGCTTCTTTGTATCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS TCA 90 bp | AAGAGATCACGGACAGAATGTGGCCGACCAGAGAAGAGGCTTGACTaGGCTGATGGACGACTTGAACATGTGGAAAGATTTGAATTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KRSRTECGRPEKRLD*ADGRLEHVERFELA Trigger: TGCTAATTCAAATCTTTCCACATGTTCAAGTCGTCCATCAGCTCAGTCAAGCCTCTTCTCTGGTCGGCCACATTCTGTCCGTGATCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS GCA 90 bp | GTCGGGCTGCAGGTGGTACTGACCATCTGGCTTTGCTTTCTTAGTTaGCATTCTAGCAAGAAGAATATTAGAACCAATTCCAACAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VGLQVVLTIWLCFLS*HSSKKNIRTNSNRG Trigger: GCCTCTGTTGGAATTGGTTCTAATATTCTTCTTGCTAGAATGGCAACTAAGAAAGCAAAGCCAGATGGTCAGTACCACCTGCAGCCCGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS GCA 90 bp | TCCAAGTCTTTCTCCTCTATGAGGTCAGTGCAGTATCTCACAACCTaGAGGATGTCTTCTTCCATCGGATCTGAGATAGTAGTGATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SKSFSSMRSVQYLTT*RMSSSIGSEIVVIH Trigger: GTGGATCACTACTATCTCAGATCCGATGGAAGAAGACATCCTGCAGGTTGTGAGATACTGCACTGACCTCATAGAGGAGAAAGACTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGGTTTGGCTCTATTGCTaGGACCTGGCCCAGGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: MKTQSITIMHFANTSQALVWLYC*DLAQDP Trigger: AGGATCCTGGGCCAGGTCCAAGCAATAGAGCCAAAC...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS GCA 90 bp | AGGATCTGTATATCCATTAACATAGATGGCAACTCCACTAAATATTaGAGACGCCGTCCCATCCTTCTGGTTAGCAGCATCTGTGCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RICISINIDGNSTKY*RRRPILLVSSICAE Trigger: TTCCGCACAGATGCTGCTAACCAGAAGGATGGGACGGCGTCTGCAATATTTAGTGGAGTTGCCATCTATGTTAATGGATATACAGATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027251.12 ENSMUST00000192594.6 ENSMUST00000193697.6 |
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| CDS GCA 90 bp | ATCGTCTACCTCGTCGGGCTGCAGGTGGTACTGACCATCTGGCTTTaGTTTCTTAGTTGCCATTCTAGCAAGAAGAATATTAGAACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: IVYLVGLQVVLTIWL*FLSCHSSKKNIRTN Trigger: ATTGGTTCTAATATTCTTCTTGCTAGAATGGCAACTAAGAAAGCAAAGCCAGATGGTCAGTACCACCTGCAGCCCGACGAGGTAGACGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CCA 90 bp | GATGAAATCGTCTACCTCGTCGGGCTGCAGGTGGTACTGACCATCTaGCTTTGCTTTCTTAGTTGCCATTCTAGCAAGAAGAATATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: DEIVYLVGLQVVLTI*LCFLSCHSSKKNIR Trigger: TCTAATATTCTTCTTGCTAGAATGGCAACTAAGAAAGCAAAGCCAGATGGTCAGTACCACCTGCAGCCCGACGAGGTAGACGATTTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CCA 90 bp | CAGAACCTATACAGCATCTGCCCTGTCTTGGGGCCAAATTCTTTCTaGAGTTTTGCCATGGTCAAACACTGCAAATCTCCACAAGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: QNLYSICPVLGPNSF*SFAMVKHCKSPQVL Trigger: TAAGACTTGTGGAGATTTGCAGTGTTTGACCATGGCAAAACTCCAGAAAGAATTTGGCCCCAAGACAGGGCAGATGCTGTATAGGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS TCA 90 bp | ATGTTGAGATGTGATGCAGTCTTGAACGAGAATAGAAATCTGAAATaGAGTTGCAGTCCGAGGGTTTGGATGGCACTGAAGGCGCTACTT | + |
|
Preference number: 5 (lower is better) Translates to: MLRCDAVLNENRNLK*SCSPRVWMALKALL Trigger: AAGTAGCGCCTTCAGTGCCATCCAAACCCTCGGACTGCAACTTCATTTCAGATTTCTATTCTCGTTCAAGACTGCATCACATCTCAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS TCA 90 bp | AGCCACTGGTTTTCCTTTGAGATCTGGTCTATTTCGTATACCCACTaGTACAAAGAAGCAGTCCATATCAACGTGCATCACACAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SHWFSFEIWSISYTH*YKEAVHINVHHTAL Trigger: CAGAGCTGTGTGATGCACGTTGATATGGACTGCTTCTTTGTATCAGTGGGTATACGAAATAGACCAGATCTCAAAGGAAAACCAGTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027251.12 ENSMUST00000193472.2 |
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| CDS CCA 90 bp | ACAGGCACCAAGCAATCCTGTGTCTTTAAGGCACCATTTGAACTATaGGTGTGTCCATTAAAAATGACAGCGGTATCTCTGGGATGCATT | + |
|
Preference number: 5 (lower is better) Translates to: TGTKQSCVFKAPFEL*VCPLKMTAVSLGCI Trigger: AATGCATCCCAGAGATACCGCTGTCATTTTTAATGGACACACCCATAGTTCAAATGGTGCCTTAAAGACACAGGATTGCTTGGTGCCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CAA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCATCTCTGAAGTCCGCGTaGCTCTTCTCTGCCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IMKTQSITIMHFANTSQASLKSA*LFSALF Trigger: GAAGAGGGCAGAGAAGAGCAACGCGGACTTCAGAGA...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS TCA 90 bp | GGAAGGGCAATTACACTAATCTTGCTGTCACTATTACAAGGTTCTTaGGGCTCTGGGATCTGTAATAAAACTGTTCCAACAGGATGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRAITLILLSLLQGS*GSGICNKTVPTGCG Trigger: GCCACATCCTGTTGGAACAGTTTTATTACAGATCCCAGAGCCTCAAGAACCTTGTAATAGTGACAGCAAGATTAGTGTAATTGCCCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CAA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGCTGTTGTTGAGCTGTTaGGCTCTATTGCTTGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: MKTQSITIMHFANTSQALLLLSC*ALLLGP Trigger: AGGTCCAAGCAATAGAGCCAAACAGCTCAACAACAG...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CAA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGGAACAGAAGTGCTTTTaGTGCTTGAAGGCCCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: MKTQSITIMHFANTSQALEQKCF*CLKAPE Trigger: TTCAGGGGCCTTCAAGCACAAAAAGCACTTCTGTTC...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS TCA 90 bp | TTTCCCTTCCCGGAAAGATACCACTACTTTGTCTCTGTAGGGTATTaGCAAACTCAGTCAATTCACACTTCCATGTTGAGATGTGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: FPFPERYHYFVSVGY*QTQSIHTSMLRCDA Trigger: TGCATCACATCTCAACATGGAAGTGTGAATTGACTGAGTTTGTCAATACCCTACAGAGACAAAGTAGTGGTATCTTTCCGGGAAGGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGTTTTTGCACTATCTGTaGCCTGGTCCAGAGTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: MKTQSITIMHFANTSQALFLHYL*PGPELQ Trigger: CTGTAACTCTGGACCAGGCAACAGATAGTGCAAAAA...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CAA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGAGCGGCACAAACTaGTTCTATTTGTTCCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IMKTQSITIMHFANTSQALSGTN*FYLFPE Trigger: CTCCGGGAACAAATAGAACAAGTTTGTGCCGCTCAG...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS-3UTR CAA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAGTCCTCTCCCTGCCTTaGTCTTTGATCATATGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IMKTQSITIMHFANTSQAVLSLP*SLIICC Trigger: GCAGCATATGATCAAAGACAAAGGCAGGGAGAGGAC...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGGCAGCACATTTGGTCTaGTCTTTGATTTCAATACGG | + |
|
Preference number: 5 (lower is better) Translates to: MKTQSITIMHFANTSQALAAHLV*SLISIR Trigger: CCGTATTGAAATCAAAGACAAGACCAAATGTGCTGC...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGACAAACTTGTTCTATTaGTTCCCGGAGATCAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: MKTQSITIMHFANTSQALTNLFY*FPEIKW Trigger: CCACTTGATCTCCGGGAACAAATAGAACAAGTTTGT...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCATTCCTCTTGTTCCTCTaGTCTTTCATTGCTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IMKTQSITIMHFANTSQAFLLFL*SFIAGG Trigger: GCCACCAGCAATGAAAGACAAGAGGAACAAGAGGAA...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAGCCACTGGTTTTCCTTaGAGATCTGGTCTATTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: IMKTQSITIMHFANTSQAATGFP*RSGLFR Trigger: ACGAAATAGACCAGATCTCAAAGGAAAACCAGTGGC...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAAAAGCTTCTGCTTCTTaGGGCTGGGTGAACCTTATT | + |
|
Preference number: 5 (lower is better) Translates to: IMKTQSITIMHFANTSQAKASAS*GWVNLI Trigger: AATAAGGTTCACCCAGCCCAAAGAAGCAGAAGCTTT...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGCTTTCCCAATTATTTTaGCACTATCTGTTGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: MKTQSITIMHFANTSQALLSQLF*HYLLPG Trigger: ACCAGGCAACAGATAGTGCAAAAATAATTGGGAAAG...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAGTAGTGATCCACTCTTaGAGCAAGGTCTTCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: IMKTQSITIMHFANTSQAVVIHS*SKVFTS Trigger: TGATGTGAAGACCTTGCTCAAAGAGTGGATCACTAC...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | ATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCACTGGCAATTACACTAATCTaGCTGTCACTATTACAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: MKTQSITIMHFANTSQALAITLI*LSLLQG Trigger: ACCTTGTAATAGTGACAGCAAGATTAGTGTAATTGC...CAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS-3UTR CAA 90 bp | ATTATGAAAACTCAGAGCATCACTATCATGCACTTTGCAAATACCTCACAAGCAGTTCTTAATGCCAACTaGTCTGGCTTCATAACTACA | + |
|
Preference number: 5 (lower is better) Translates to: IMKTQSITIMHFANTSQAVLNAN*SGFITT Trigger: TGTAGTTATGAAGCCAGACAAGTTGGCATTAAGAAC...TGCTTGTGAGGTATTTGCAAAGTGCATGATAGTGATGCTCTGAGTTTTCATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS TCA 90 bp | TTTGAGGGACCTGGCTTCATAACTACAAGAAGCAATCTCAGCTTTTaGCAGAACAGAATCAATTCCATTTGTTTGTGTAGAATCTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: FEGPGFITTRSNLSF*QNRINSICLCRILI Trigger: AATCAAGATTCTACACAAACAAATGGAATTGATTCTGTTCTGTCAAAAGCTGAGATTGCTTCTTGTAGTTATGAAGCCAGGTCCCTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194815.6 |
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| CDS CCA 90 bp | TCATATCCGATATATTTAGTTTCATTGTATGAAACATGTTTAGAGTaGCTTTCCCAATTATTTTTGCACTATCTGTTGCCTGGTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SYPIYLVSLYETCLE*LSQLFLHYLLPGPE Trigger: CTCTGGACCAGGCAACAGATAGTGCAAAAATAATTGGGAAAGCCACTCTAAACATGTTTCATACAATGAAACTAAATATATCGGATATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 72 bp | GCATCTGTGCGGAACTGCTCCTCCAGCTTCTGGACCTaGGCAGCCATGTACCCGCCCCATTTTTCCCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ASVRNCSSSFWT*AAMYPPHFSQP Trigger: TGGCTGGGAAAAATGGGGCGGGTACATGGCTGCCAAGGTCCAGAAGCTGGAGGAGCAGTTCCGCACAGATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027251.12 ENSMUST00000192594.6 ENSMUST00000193697.6 |
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| CDS CAA 90 bp | TGGTTAGCAGCATCTGTGCGGAACTGCTCCTCCAGCTTCTGGACCTaGGCAGCCATGTACCCGCCCCATTTTTCCCAGCCATCATTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WLAASVRNCSSSFWT*AAMYPPHFSQPSFS Trigger: GGAGAATGATGGCTGGGAAAAATGGGGCGGGTACATGGCTGCCAAGGTCCAGAAGCTGGAGGAGCAGTTCCGCACAGATGCTGCTAACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027251.12 ENSMUST00000192594.6 ENSMUST00000193697.6 |
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| CDS TCA 72 bp | TGGTGCTGTGTTGCAAGTGCTGCACTGTGCAGTCTCTaGAGTCCGCGTTGCTCTTCTCTGCCCTCTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WCCVASAALCSL*SPRCSSLPSSP Trigger: AGGAGAAGAGGGCAGAGAAGAGCAACGCGGACTTCAGAGACTGCACAGTGCAGCACTTGCAACACAGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS GCA 72 bp | CGCAAAGCATCTGCACTTCTGGTGCTGTGTTGCAAGTaGTGCACTGTGCAGTCTCTGAAGTCCGCGTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RKASALLVLCCK*CTVQSLKSALL Trigger: GAGCAACGCGGACTTCAGAGACTGCACAGTGCAGCACTTGCAACACAGCACCAGAAGTGCAGATGCTTTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 72 bp | CTTTCCACGTGGCTCTCCCTGCTGAGCGGCACAAACTaGTTCTATTTGTTCCCGGAGATCAAGTGGGAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LSTWLSLLSGTN*FYLFPEIKWER Trigger: GCGCTCCCACTTGATCTCCGGGAACAAATAGAACAAGTTTGTGCCGCTCAGCAGGGAGAGCCACGTGGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 90 bp | AGCTGTTTGGCTCTATTGCTTGGACCTGGCCCAGGATCCTCAGGTTaGCACACAGGATTGAAGTTGAGACTCTTCTGTGCAGCCGACGGC | + |
|
Preference number: 6 (lower is better) Translates to: SCLALLLGPGPGSSG*HTGLKLRLFCAADG Trigger: GCCGTCGGCTGCACAGAAGAGTCTCAACTTCAATCCTGTGTGCAAACCTGAGGATCCTGGGCCAGGTCCAAGCAATAGAGCCAAACAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CCA 72 bp | ACTCCACTAAATATTGCAGACGCCGTCCCATCCTTCTaGTTAGCAGCATCTGTGCGGAACTGCTCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TPLNIADAVPSF*LAASVRNCSSS Trigger: GCTGGAGGAGCAGTTCCGCACAGATGCTGCTAACCAGAAGGATGGGACGGCGTCTGCAATATTTAGTGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027251.12 ENSMUST00000192594.6 ENSMUST00000193697.6 |
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| CDS CCA 72 bp | GCTAGGTTGGGTGCTGCTGGTCTAAAACAGCTGCTCTaGCCTGGCAGTAAACTAGATAGGTCCTGTGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: ARLGAAGLKQLL*PGSKLDRSCAP Trigger: TGGTGCACAGGACCTATCTAGTTTACTGCCAGGCCAGAGCAGCTGTTTTAGACCAGCAGCACCCAACCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS GCA 72 bp | AGGTTTGCACACAGGATTGAAGTTGAGACTCTTCTGTaGAGCCGACGGCTTGGTGTAGAGCTGATAGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RFAHRIEVETLL*SRRLGVELIGS Trigger: GCTCCCTATCAGCTCTACACCAAGCCGTCGGCTGCACAGAAGAGTCTCAACTTCAATCCTGTGTGCAAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 90 bp | TTGAGCAAGGTCTTCACATCACTGAATTCCACAGCTCCAGCTAGGTaGGGTGCTGCTGGTCTAAAACAGCTGCTCTGGCCTGGCAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSKVFTSLNSTAPAR*GAAGLKQLLWPGSK Trigger: TTTACTGCCAGGCCAGAGCAGCTGTTTTAGACCAGCAGCACCCAACCTAGCTGGAGCTGTGGAATTCAGTGATGTGAAGACCTTGCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CCA 72 bp | CCTGTTGTTGAGCTGTTTGGCTCTATTGCTTGGACCTaGCCCAGGATCCTCAGGTTTGCACACAGGATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PVVELFGSIAWT*PRILRFAHRIE Trigger: TTCAATCCTGTGTGCAAACCTGAGGATCCTGGGCCAGGTCCAAGCAATAGAGCCAAACAGCTCAACAACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CCA 72 bp | ATTTACCCTGTTGTTGAGCTGTTTGGCTCTATTGCTTaGACCTGGCCCAGGATCCTCAGGTTTGCACACAGG | + |
|
Preference number: 6 (lower is better) Translates to: IYPVVELFGSIA*TWPRILRFAHR Trigger: CCTGTGTGCAAACCTGAGGATCCTGGGCCAGGTCCAAGCAATAGAGCCAAACAGCTCAACAACAGGGTAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 72 bp | GCTCTATTGCTTGGACCTGGCCCAGGATCCTCAGGTTaGCACACAGGATTGAAGTTGAGACTCTTCTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ALLLGPGPGSSG*HTGLKLRLFCA Trigger: TGCACAGAAGAGTCTCAACTTCAATCCTGTGTGCAAACCTGAGGATCCTGGGCCAGGTCCAAGCAATAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 90 bp | TTCTCCTCCTGGGTGGAGTCTAAAGATAGCCTGCTAGCAACACTGTaGCCCACAGGCACCAAGCAATCCTGTGTCTTTAAGGCACCATTT | + |
|
Preference number: 6 (lower is better) Translates to: FSSWVESKDSLLATL*PTGTKQSCVFKAPF Trigger: AAATGGTGCCTTAAAGACACAGGATTGCTTGGTGCCTGTGGGCAACAGTGTTGCTAGCAGGCTATCTTTAGACTCCACCCAGGAGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS TCA 72 bp | ACTGGTTCTTTCTTCTTTCCACGTGGCTCTCCCTGCTaGGCGGCACAAACTTGTTCTATTTGTTCCCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TGSFFFPRGSPC*AAQTCSICSRR Trigger: TCTCCGGGAACAAATAGAACAAGTTTGTGCCGCTCAGCAGGGAGAGCCACGTGGAAAGAAGAAAGAACCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CCA 72 bp | AACCTCGGCAGAACCTATACAGCATCTGCCCTGTCTTaGGGCCAAATTCTTTCTGGAGTTTTGCCATGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: NLGRTYTASALS*GQILSGVLPWS Trigger: TGACCATGGCAAAACTCCAGAAAGAATTTGGCCCCAAGACAGGGCAGATGCTGTATAGGTTCTGCCGAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS TCA 72 bp | AAGAAGCAGTCCATATCAACGTGCATCACACAGCTCTaGTGTCTGGGTGAGCTCAACACTGACATAGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: KKQSISTCITQL*CLGELNTDIVP Trigger: AGGCACTATGTCAGTGTTGAGCTCACCCAGACATCAGAGCTGTGTGATGCACGTTGATATGGACTGCTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027251.12 ENSMUST00000193472.2 |
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| CDS TCA 72 bp | AGTCTTAATCCCCAAAGATGCAAGCTTAGATTCCATTaGACGTCCAACTCCCGGCAGGTTAGTGACGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLNPQRCKLRFH*TSNSRQVSDEL Trigger: CAGCTCGTCACTAACCTGCCGGGAGTTGGACGTTCAATGGAATCTAAGCTTGCATCTTTGGGGATTAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 90 bp | GTTGGAAGAGATCACGGACAGAATGTGGCCGACCAGAGAAGAGGCTaGACTGAGCTGATGGACGACTTGAACATGTGGAAAGATTTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: VGRDHGQNVADQRRG*TELMDDLNMWKDLN Trigger: ATTCAAATCTTTCCACATGTTCAAGTCGTCCATCAGCTCAGTCAAGCCTCTTCTCTGGTCGGCCACATTCTGTCCGTGATCTCTTCCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 90 bp | AGATGTACTGGTTGGCTGCTGATGAGTAGTGTCCTCTCCCTGCCTTaGTCTTTGATCATATGCTGCTTTCAGCTCCTTTTGAAGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RCTGWLLMSSVLSLP*SLIICCFQLLLKLS Trigger: GCTGAGCTTCAAAAGGAGCTGAAAGCAGCATATGATCAAAGACAAAGGCAGGGAGAGGACACTACTCATCAGCAGCCAACCAGTACATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 90 bp | AGGATGTCTTCTTCCATCGGATCTGAGATAGTAGTGATCCACTCTTaGAGCAAGGTCTTCACATCACTGAATTCCACAGCTCCAGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: RMSSSIGSEIVVIHS*SKVFTSLNSTAPAR Trigger: CCTAGCTGGAGCTGTGGAATTCAGTGATGTGAAGACCTTGCTCAAAGAGTGGATCACTACTATCTCAGATCCGATGGAAGAAGACATCCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS TCA 72 bp | GCTGATAGGGAGCAGAGGACAAGAGTCTCCCAGCTTTaGTGCTTTCCACAATCCATTCTGGTCGTATTACTT | + |
|
Preference number: 6 (lower is better) Translates to: ADREQRTRVSQL*CFPQSILVVLL Trigger: AAGTAATACGACCAGAATGGATTGTGGAAAGCATCAAAGCTGGGAGACTCTTGTCCTCTGCTCCCTATCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027251.12 ENSMUST00000192594.6 |
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| CDS GCA 72 bp | CTCGTCGGGCTGCAGGTGGTACTGACCATCTGGCTTTaGTTTCTTAGTTGCCATTCTAGCAAGAAGAATATT | + |
|
Preference number: 6 (lower is better) Translates to: LVGLQVVLTIWL*FLSCHSSKKNI Trigger: AATATTCTTCTTGCTAGAATGGCAACTAAGAAAGCAAAGCCAGATGGTCAGTACCACCTGCAGCCCGACGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 72 bp | TCTGCCCTGTCTTGGGGCCAAATTCTTTCTGGAGTTTaGCCATGGTCAAACACTGCAAATCTCCACAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SALSWGQILSGV*PWSNTANLHKS Trigger: AGACTTGTGGAGATTTGCAGTGTTTGACCATGGCAAAACTCCAGAAAGAATTTGGCCCCAAGACAGGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS GCA 72 bp | TTCTCCTCTATGAGGTCAGTGCAGTATCTCACAACCTaGAGGATGTCTTCTTCCATCGGATCTGAGATAGTA | + |
|
Preference number: 6 (lower is better) Translates to: FSSMRSVQYLTT*RMSSSIGSEIV Trigger: TACTATCTCAGATCCGATGGAAGAAGACATCCTGCAGGTTGTGAGATACTGCACTGACCTCATAGAGGAGAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS GCA 72 bp | ATATCCATTAACATAGATGGCAACTCCACTAAATATTaGAGACGCCGTCCCATCCTTCTGGTTAGCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: ISINIDGNSTKY*RRRPILLVSSI Trigger: GATGCTGCTAACCAGAAGGATGGGACGGCGTCTGCAATATTTAGTGGAGTTGCCATCTATGTTAATGGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027251.12 ENSMUST00000192594.6 ENSMUST00000193697.6 |
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| CDS CAA 72 bp | TTAGAACCAATTCCAACAGAGGCAGCACATTTGGTCTaGTCTTTGATTTCAATACGGAGGGCAGCTGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LEPIPTEAAHLV*SLISIRRAAAN Trigger: GTTTGCAGCTGCCCTCCGTATTGAAATCAAAGACAAGACCAAATGTGCTGCCTCTGTTGGAATTGGTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 72 bp | TCTTCCATCGGATCTGAGATAGTAGTGATCCACTCTTaGAGCAAGGTCTTCACATCACTGAATTCCACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSIGSEIVVIHS*SKVFTSLNSTA Trigger: AGCTGTGGAATTCAGTGATGTGAAGACCTTGCTCAAAGAGTGGATCACTACTATCTCAGATCCGATGGAAGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 90 bp | ATATTAGAACCAATTCCAACAGAGGCAGCACATTTGGTCTTGTCTTaGATTTCAATACGGAGGGCAGCTGCAAACTCCTCAGGAGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ILEPIPTEAAHLVLS*ISIRRAAANSSGES Trigger: ACTTTCTCCTGAGGAGTTTGCAGCTGCCCTCCGTATTGAAATCAAAGACAAGACCAAATGTGCTGCCTCTGTTGGAATTGGTTCTAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 90 bp | AGAAGAATATTAGAACCAATTCCAACAGAGGCAGCACATTTGGTCTaGTCTTTGATTTCAATACGGAGGGCAGCTGCAAACTCCTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RRILEPIPTEAAHLV*SLISIRRAAANSSG Trigger: TCCTGAGGAGTTTGCAGCTGCCCTCCGTATTGAAATCAAAGACAAGACCAAATGTGCTGCCTCTGTTGGAATTGGTTCTAATATTCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 90 bp | CTAGCAAGAAGAATATTAGAACCAATTCCAACAGAGGCAGCACATTaGGTCTTGTCTTTGATTTCAATACGGAGGGCAGCTGCAAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: LARRILEPIPTEAAH*VLSLISIRRAAANS Trigger: GGAGTTTGCAGCTGCCCTCCGTATTGAAATCAAAGACAAGACCAAATGTGCTGCCTCTGTTGGAATTGGTTCTAATATTCTTCTTGCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS GCA 72 bp | TCAAACGCCATGTTCCATACAGACTCCACCGACTGCTaGATCAACCTTTTCATGTATTTTATAACCAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: SNAMFHTDSTDC*INLFMYFITRS Trigger: GGATCTGGTTATAAAATACATGAAAAGGTTGATGCAGCAGTCGGTGGAGTCTGTATGGAACATGGCGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 72 bp | TTAGAGTGGCTTTCCCAATTATTTTTGCACTATCTGTaGCCTGGTCCAGAGTTACAGTCCTGGCGATGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LEWLSQLFLHYL*PGPELQSWRCY Trigger: ATAACATCGCCAGGACTGTAACTCTGGACCAGGCAACAGATAGTGCAAAAATAATTGGGAAAGCCACTCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS TCA 72 bp | CCGGAAAGATACCACTACTTTGTCTCTGTAGGGTATTaGCAAACTCAGTCAATTCACACTTCCATGTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PERYHYFVSVGY*QTQSIHTSMLR Trigger: TCTCAACATGGAAGTGTGAATTGACTGAGTTTGTCAATACCCTACAGAGACAAAGTAGTGGTATCTTTCCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS TCA 72 bp | TTGTTCCTCTTGTCTTTCATTGCTGGTGGCTTTAGCTaGAGTAAAGGATTCTTTGGCACAGATGTACTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LFLLSFIAGGFS*SKGFFGTDVLV Trigger: AACCAGTACATCTGTGCCAAAGAATCCTTTACTTCAGCTAAAGCCACCAGCAATGAAAGACAAGAGGAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS GCA 72 bp | GTGTGTCCATTAAAAATGACAGCGGTATCTCTGGGATaGATTACTCCATTCTGTTTCCTTCCTGGAAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: VCPLKMTAVSLG*ITPFCFLPGNV Trigger: TACATTTCCAGGAAGGAAACAGAATGGAGTAATGCATCCCAGAGATACCGCTGTCATTTTTAATGGACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS GCA 72 bp | CAGGTGGTACTGACCATCTGGCTTTGCTTTCTTAGTTaGCATTCTAGCAAGAAGAATATTAGAACCAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: QVVLTIWLCFLS*HSSKKNIRTNS Trigger: GGAATTGGTTCTAATATTCTTCTTGCTAGAATGGCAACTAAGAAAGCAAAGCCAGATGGTCAGTACCACCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS GCA 72 bp | AAGTCAAACGCCATGTTCCATACAGACTCCACCGACTaGTGCATCAACCTTTTCATGTATTTTATAACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: KSNAMFHTDSTD*CINLFMYFITR Trigger: TCTGGTTATAAAATACATGAAAAGGTTGATGCAGCAGTCGGTGGAGTCTGTATGGAACATGGCGTTTGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CCA 72 bp | AAGCAATCCTGTGTCTTTAAGGCACCATTTGAACTATaGGTGTGTCCATTAAAAATGACAGCGGTATCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KQSCVFKAPFEL*VCPLKMTAVSL Trigger: CAGAGATACCGCTGTCATTTTTAATGGACACACCCATAGTTCAAATGGTGCCTTAAAGACACAGGATTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 72 bp | AGAATATTAGAACCAATTCCAACAGAGGCAGCACATTaGGTCTTGTCTTTGATTTCAATACGGAGGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RILEPIPTEAAH*VLSLISIRRAA Trigger: AGCTGCCCTCCGTATTGAAATCAAAGACAAGACCAAATGTGCTGCCTCTGTTGGAATTGGTTCTAATATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 90 bp | GAAACATGTTTAGAGTGGCTTTCCCAATTATTTTTGCACTATCTGTaGCCTGGTCCAGAGTTACAGTCCTGGCGATGTTATCACAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: ETCLEWLSQLFLHYL*PGPELQSWRCYHKF Trigger: GAATTTGTGATAACATCGCCAGGACTGTAACTCTGGACCAGGCAACAGATAGTGCAAAAATAATTGGGAAAGCCACTCTAAACATGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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| CDS CAA 90 bp | GTTTCATTGTATGAAACATGTTTAGAGTGGCTTTCCCAATTATTTTaGCACTATCTGTTGCCTGGTCCAGAGTTACAGTCCTGGCGATGT | + |
|
Preference number: 6 (lower is better) Translates to: VSLYETCLEWLSQLF*HYLLPGPELQSWRC Trigger: ACATCGCCAGGACTGTAACTCTGGACCAGGCAACAGATAGTGCAAAAATAATTGGGAAAGCCACTCTAAACATGTTTCATACAATGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS TCA 72 bp | ATTACACTAATCTTGCTGTCACTATTACAAGGTTCTTaGGGCTCTGGGATCTGTAATAAAACTGTTCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: ITLILLSLLQGS*GSGICNKTVPT Trigger: TGTTGGAACAGTTTTATTACAGATCCCAGAGCCTCAAGAACCTTGTAATAGTGACAGCAAGATTAGTGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
||
| CDS TCA 72 bp | AGAACAGAATCAATTCCATTTGTTTGTGTAGAATCTTaGTTCTCCCATACTGATGAATCTGGTATATCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTESIPFVCVES*FSHTDESGISA Trigger: AGCAGATATACCAGATTCATCAGTATGGGAGAATCAAGATTCTACACAAACAAATGGAATTGATTCTGTTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027251.12 ENSMUST00000194815.6 |
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| CDS CAA 72 bp | TACCAACCCCTCTCATATCCGATATATTTAGTTTCATaGTATGAAACATGTTTAGAGTGGCTTTCCCAATTA | + |
|
Preference number: 6 (lower is better) Translates to: YQPLSYPIYLVS*YETCLEWLSQL Trigger: TAATTGGGAAAGCCACTCTAAACATGTTTCATACAATGAAACTAAATATATCGGATATGAGAGGGGTTGGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027251.12 |
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