Pregenerated sensors for RETSAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056666Ensembl transcript IDs: ENSMUST00000070597.13, ENSMUST00000129071.2, ENSMUST00000176168.3, ENSMUST00000176364.8, ENSMUST00000205878.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TACATCTTCTTCTTTTGTGCCTTGACCTTTGAGCCAAGAGCCTGCAGATCTGAGTCAGGATGGCACTGCTaGACAGCAAGGCCCCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: YIFFFCALTFEPRACRSESGWHC*TARPPA Trigger: TGCAGGGGGCCTTGCTGTGCAGCAGTGCCATCCTGA...CTCAGATCTGCAGGCTCTTGGCTCAAAGGTCAAGGCACAAAAGAAGAAGATGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCTTTCCTCTGGCTCTTCTCTGAACGGACTACATCTTCTTCTTTTGTGCCTTGAGAAGTTGGGGAGGTaGCTTTCCTCTGGCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: CLSSGSSLNGLHLLLLCLEKLGR*LSSGSS Trigger: AGAAGAGCCAGAGGAAAGGCACCTCCCCAACTTCTC...AAGGCACAAAAGAAGAAGATGTAGTCCGTTCAGAGAAGAGCCAGAGGAAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
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| 3UTR CAA 90 bp | CAAGACAGGGTTTCTCTGTATAACAGAGCTCTGGCTGCCCTGGACTaGCTTCATAAACTAGTTCTGGCTTCAGATTCACAGAGCTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: QDRVSLYNRALAALD*LHKLVLASDSQSSV Trigger: GACAGAGCTCTGTGAATCTGAAGCCAGAACTAGTTTATGAAGCAAGTCCAGGGCAGCCAGAGCTCTGTTATACAGAGAAACCCTGTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTTCCTCTGGCTCTTCTCTGAACGGACTACATCTTCTTCTTTTGTGCCTTAAGAGCCTGCAGATCTaGGTACAAGTTCCGTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: CLSSGSSLNGLHLLLLCLKSLQI*VQVPFQ Trigger: CTGAAACGGAACTTGTACTCAGATCTGCAGGCTCTT...AAGGCACAAAAGAAGAAGATGTAGTCCGTTCAGAGAAGAGCCAGAGGAAAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCTGGTCTATACATATGAAACAAATGAATTTGTGGTTTAGTTCTGGGACCTCACAGAGCTCTGTCTaGCCCTGCCTTCTGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: CAWSIHMKQMNLWFSSGTSQSSV*PCLLSA Trigger: AGCACTCAGAAGGCAGGGGCAGACAGAGCTCTGTGA...GGTCCCAGAACTAAACCACAAATTCATTTGTTTCATATGTATAGACCAGGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCTGGTCTATACATATGAAACAAATGAATTTGTGGTTTAGTTCTGGGACCGAGAAGTTGGGGAGGTaGCTTTCCTCTGGCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: CAWSIHMKQMNLWFSSGTEKLGR*LSSGSS Trigger: AGAAGAGCCAGAGGAAAGGCACCTCCCCAACTTCTC...GGTCCCAGAACTAAACCACAAATTCATTTGTTTCATATGTATAGACCAGGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| 3UTR-3UTR GCA 90 bp | TGTTGTGCCTGGTCTATACATATGAAACAAATGAATTTGTGGTTTAGTTCTGGGCTCAGTTTGACTATGTaGCAGCAACTACAAATGCCG | + |
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Preference number: 2 (lower is better) Translates to: CCAWSIHMKQMNLWFSSGLSLTM*QQLQMP Trigger: CGGCATTTGTAGTTGCTGGCACATAGTCAAACTGAG...CCCAGAACTAAACCACAAATTCATTTGTTTCATATGTATAGACCAGGCACAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| 3UTR TCA 72 bp | CTTCAGATTCACAGAGCTCTGTCTGCCCCTGCCTTCTaGGTGCTGGGGTTAAAGGCCGGTGCCAGCACTGCC | + |
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Preference number: 3 (lower is better) Translates to: LQIHRALSAPAF*VLGLKAGASTA Trigger: GGCAGTGCTGGCACCGGCCTTTAACCCCAGCACTCAGAAGGCAGGGGCAGACAGAGCTCTGTGAATCTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| 3UTR GCA 72 bp | GTTCTGGCTTCAGATTCACAGAGCTCTGTCTGCCCCTaGCTTCTGAGTGCTGGGGTTAAAGGCCGGTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: VLASDSQSSVCP*LLSAGVKGRCQ Trigger: CTGGCACCGGCCTTTAACCCCAGCACTCAGAAGGCAGGGGCAGACAGAGCTCTGTGAATCTGAAGCCAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| 3UTR-3UTR CAA 90 bp | TGGGTGCCTGACCATAGCTTGGAGTTGGGTGTAGGAAAGGCATGGGAGCATTCTGGACACCACGAGAAGTaGGGGAGGTGCCTTTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: WVPDHSLELGVGKAWEHSGHHEK*GRCLSS Trigger: AGAGGAAAGGCACCTCCCCAACTTCTCGTGGTGTCC...AGAATGCTCCCATGCCTTTCCTACACCCAACTCCAAGCTATGGTCAGGCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| 3UTR GCA 72 bp | AAACTAGTTCTGGCTTCAGATTCACAGAGCTCTGTCTaGCCCTGCCTTCTGAGTGCTGGGGTTAAAGGCCGG | + |
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Preference number: 3 (lower is better) Translates to: KLVLASDSQSSV*PCLLSAGVKGR Trigger: CCGGCCTTTAACCCCAGCACTCAGAAGGCAGGGGCAGACAGAGCTCTGTGAATCTGAAGCCAGAACTAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| 3UTR-3UTR CAA 90 bp | TGCCTTTCCTCTGGCTCTTCTCTGAACGGACTACATCTTCTTCTTTTGTGCCTTGGACACCACGAGAAGTaGGGGAGGTGCCTTTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: CLSSGSSLNGLHLLLLCLGHHEK*GRCLSS Trigger: AGAGGAAAGGCACCTCCCCAACTTCTCGTGGTGTCC...AAGGCACAAAAGAAGAAGATGTAGTCCGTTCAGAGAAGAGCCAGAGGAAAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
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| 3UTR-3UTR CAA 90 bp | TATAACAGAGCTCTGGCTGCCCTGGACTTGCTTCATAAACTAGTTCTGGCTTCACGGCAGTGGTATCTTTaGGTGTGTTCCTTTAACCCA | + |
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Preference number: 3 (lower is better) Translates to: YNRALAALDLLHKLVLASRQWYL*VCSFNP Trigger: TGGGTTAAAGGAACACACCAAAAGATACCACTGCCG...TGAAGCCAGAACTAGTTTATGAAGCAAGTCCAGGGCAGCCAGAGCTCTGTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| 3UTR TCA 72 bp | AACTTAGACCTGAGGGTTTTCTTAGGTCTGGCACTTTaGGAGAGTTGCTACTCCAAGCCCACACTTTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: NLDLRVFLGLAL*ESCYSKPTLFH Trigger: ATGGAAAAGTGTGGGCTTGGAGTAGCAACTCTCTCAAAGTGCCAGACCTAAGAAAACCCTCAGGTCTAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| 3UTR CCA 72 bp | CTACAAATGCCGTGTCTAGGCTTGGTTCATCGGCAGTaGTATCTTTTGGTGTGTTCCTTTAACCCACTTCTA | + |
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Preference number: 3 (lower is better) Translates to: LQMPCLGLVHRQ*YLLVCSFNPLL Trigger: TAGAAGTGGGTTAAAGGAACACACCAAAAGATACCACTGCCGATGAACCAAGCCTAGACACGGCATTTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| 3UTR CCA 72 bp | TGTGCCTGGTCTATACATATGAAACAAATGAATTTGTaGTTTAGTTCTGGGACCCATTCCCCAGGTTATCTC | + |
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Preference number: 3 (lower is better) Translates to: CAWSIHMKQMNL*FSSGTHSPGYL Trigger: GAGATAACCTGGGGAATGGGTCCCAGAACTAAACCACAAATTCATTTGTTTCATATGTATAGACCAGGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR GCA 90 bp | TGCCCCTGCCTTCTGAGTGCTGGGGTTAAAGGCCGGTGCCAGCACTGCCCAGCCGCTGCCGATCACCACTaGATCCAGCTTCTCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: CPCLLSAGVKGRCQHCPAAADHH*IQLLWY Trigger: GTACCAGAGAAGCTGGATGCAGTGGTGATCGGCAGC...GGCTGGGCAGTGCTGGCACCGGCCTTTAACCCCAGCACTCAGAAGGCAGGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR TCA 90 bp | TGCCCCTGCCTTCTGAGTGCTGGGGTTAAAGGCCGGTGCCAGCACTGCCCAGCCGGTTGGATCCTTGCTTaGTGGGAAGGCAATGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: CPCLLSAGVKGRCQHCPAGWILA*WEGNEE Trigger: CTCTTCATTGCCTTCCCATCAAGCAAGGATCCAACC...GGCTGGGCAGTGCTGGCACCGGCCTTTAACCCCAGCACTCAGAAGGCAGGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR TCA 90 bp | TGCCCCTGCCTTCTGAGTGCTGGGGTTAAAGGCCGGTGCCAGCACTGCCCAGCCTCTTCTTTTGTGCCTTaGCCTTTGAGCCAAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: CPCLLSAGVKGRCQHCPASSFVP*PLSQEP Trigger: AGGCTCTTGGCTCAAAGGTCAAGGCACAAAAGAAGA...GGCTGGGCAGTGCTGGCACCGGCCTTTAACCCCAGCACTCAGAAGGCAGGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR CCA 90 bp | ACCCAGGACAATAGCCAAGGCAGCCCAGCTCCTGGTGTAGGCTTGAGGACGAGACTGTCAGGTAGAGGTTaGGGATGGGGGTTTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: TQDNSQGSPAPGVGLRTRLSGRG*GWGFGL Trigger: GAGCCCAAACCCCCATCCCCAACCTCTACCTGACAG...TCTCGTCCTCAAGCCTACACCAGGAGCTGGGCTGCCTTGGCTATTGTCCTGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129071.2 |
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| CDS-3UTR TCA 90 bp | TATAACAGAGCTCTGGCTGCCCTGGACTTGCTTCATAAACTAGTTCTGGCTTCAGTACAGTGGCCCTGGTaGGGACAGCGCCCCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: YNRALAALDLLHKLVLASVQWPW*GQRPRP Trigger: GGGCCGGGGGCGCTGTCCTCACCAGGGCCACTGTAC...TGAAGCCAGAACTAGTTTATGAAGCAAGTCCAGGGCAGCCAGAGCTCTGTTATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR TCA 90 bp | TGCCCCTGCCTTCTGAGTGCTGGGGTTAAAGGCCGGTGCCAGCACTGCCCAGCCTTGATGGGAAGGCAATaGAGAGAAGGGGAATGTGTT | + |
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Preference number: 4 (lower is better) Translates to: CPCLLSAGVKGRCQHCPALMGRQ*REGECV Trigger: AACACATTCCCCTTCTCTTCATTGCCTTCCCATCAA...GGCTGGGCAGTGCTGGCACCGGCCTTTAACCCCAGCACTCAGAAGGCAGGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR GCA 90 bp | GTTCATCCCTCCATATCAAGGCCACCCAAAGAGAGACAGCCTCAGATAGAACCCTCACACTCTCCACCTTaGCCTCCAGCTGTGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: VHPSISRPPKERQPQIEPSHSPP*PPAVGT Trigger: TGTTCCCACAGCTGGAGGGCAAGGTGGAGAGTGTGA...GGGTTCTATCTGAGGCTGTCTCTCTTTGGGTGGCCTTGATATGGAGGGATGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129071.2 |
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| CDS-3UTR CCA 90 bp | TGGGTGCCTGACCATAGCTTGGAGTTGGGTGTAGGAAAGGCATGGGAGCATTCTCTGCTTCTTCACATCTaGCAGATGGCGGACAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: WVPDHSLELGVGKAWEHSLLLHI*QMADSL Trigger: GAGACTGTCCGCCATCTGCCAGATGTGAAGAAGCAG...AGAATGCTCCCATGCCTTTCCTACACCCAACTCCAAGCTATGGTCAGGCACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR CCA 90 bp | CAAGGGTTCTTGTGTTCATCCCTCCATATCAAGGCCACCCAAAGAGAGACAGCCGGTAGAGGTTGGGGATaGGGGTTTGGGCTCTTATGG | + |
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Preference number: 4 (lower is better) Translates to: QGFLCSSLHIKATQRETAGRGWG*GFGLLW Trigger: CCATAAGAGCCCAAACCCCCATCCCCAACCTCTACC...GGCTGTCTCTCTTTGGGTGGCCTTGATATGGAGGGATGAACACAAGAACCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129071.2 |
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| CDS-3UTR TCA 90 bp | AAGGGTTCTTGTGTTCATCCCTCCATATCAAGGCCACCCAAAGAGAGACAGCCTATGGAAGCCATTGCATaGGGATGCAGCCGAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: KGSCVHPSISRPPKERQPMEAIA*GCSRAK Trigger: CTTGGCTCGGCTGCATCCTCATGCAATGGCTTCCAT...AGGCTGTCTCTCTTTGGGTGGCCTTGATATGGAGGGATGAACACAAGAACCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129071.2 |
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| CDS-3UTR GCA 90 bp | AGAGTTGCTACTCCAAGCCCACACTTTTCCATGTATAGAGCATCACAACACGAGGGGGCCCAGTCCAGTTaGCCTTCAGTGATCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RVATPSPHFSMYRASQHEGAQSS*PSVIWS Trigger: GGACCAGATCACTGAAGGGCAACTGGACTGGGCCCC...CTCGTGTTGTGATGCTCTATACATGGAAAAGTGTGGGCTTGGAGTAGCAACTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR GCA 90 bp | GGCTTGGTTCATCGGCAGTGGTATCTTTTGGTGTGTTCCTTTAACCCACTTCTATCAGGATGGCACTGCTaGACAGCAAGGCCCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GLVHRQWYLLVCSFNPLLSGWHC*TARPPA Trigger: TGCAGGGGGCCTTGCTGTGCAGCAGTGCCATCCTGA...TAGAAGTGGGTTAAAGGAACACACCAAAAGATACCACTGCCGATGAACCAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR TCA 90 bp | TGTTTATATGTGCAAGGAATTGCTGTAGGAGGGAGGACACCACGAGAAGTTGGGTTTTCCCCAAAGGTATaGCAACAGCCGCCCGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: CLYVQGIAVGGRTPREVGFSPKV*QQPPAL Trigger: CAAGGCGGGCGGCTGTTGTCATACCTTTGGGGAAAA...CCCAACTTCTCGTGGTGTCCTCCCTCCTACAGCAATTCCTTGCACATATAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR TCA 90 bp | TGTTTATATGTGCAAGGAATTGCTGTAGGAGGGAGGACACCACGAGAAGTTGGGGTAGCCCAAACTTGCTaGGGAGCTGAGTCAAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: CLYVQGIAVGGRTPREVGVAQTC*GAESRA Trigger: TGCCCTTGACTCAGCTCCTCAGCAAGTTTGGGCTAC...CCCAACTTCTCGTGGTGTCCTCCCTCCTACAGCAATTCCTTGCACATATAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR GCA 90 bp | AGAGTTGCTACTCCAAGCCCACACTTTTCCATGTATAGAGCATCACAACACGAGGAAGCCCCAAGCTGCTaGAGGACTTCAGCTAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RVATPSPHFSMYRASQHEEAPSC*RTSARL Trigger: GAGCCTAGCTGAAGTCCTGCAGCAGCTTGGGGCTTC...CTCGTGTTGTGATGCTCTATACATGGAAAAGTGTGGGCTTGGAGTAGCAACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR GCA 90 bp | TCCATGTATAGAGCATCACAACACGAGAGTGAGGAGGAACAAAAAGCTTCAGGGAGTCAACACCACGCTTaGCCTTTGGCTCCTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SMYRASQHESEEEQKASGSQHHA*PLAPPA Trigger: GGCAGGAGGAGCCAAAGGGCAAGCGTGGTGTTGACT...CCCTGAAGCTTTTTGTTCCTCCTCACTCTCGTGTTGTGATGCTCTATACATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR GCA 90 bp | TACATCTTCTTCTTTTGTGCCTTGACCTTTGAGCCAAGAGCCTGCAGATCTGAGAGTCAACACCACGCTTaGCCTTTGGCTCCTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: YIFFFCALTFEPRACRSESQHHA*PLAPPA Trigger: GGCAGGAGGAGCCAAAGGGCAAGCGTGGTGTTGACT...CTCAGATCTGCAGGCTCTTGGCTCAAAGGTCAAGGCACAAAAGAAGAAGATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
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| CDS-3UTR GCA 90 bp | TGTGTTCATCCCTCCATATCAAGGCCACCCAAAGAGAGACAGCCTCAGATAGAAGGTAGCTCCTCGGGGTaGAGCCAGATAGTACTGGTT | + |
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Preference number: 4 (lower is better) Translates to: CVHPSISRPPKERQPQIEGSSSG*SQIVLV Trigger: AACCAGTACTATCTGGCTGCACCCCGAGGAGCTACC...TTCTATCTGAGGCTGTCTCTCTTTGGGTGGCCTTGATATGGAGGGATGAACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129071.2 |
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| CDS-3UTR CCA 90 bp | TCCATGTATAGAGCATCACAACACGAGAGTGAGGAGGAACAAAAAGCTTCAGGGCTGTCAGGTAGAGGTTaGGGATGGGGGTTTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SMYRASQHESEEEQKASGLSGRG*GWGFGL Trigger: GAGCCCAAACCCCCATCCCCAACCTCTACCTGACAG...CCCTGAAGCTTTTTGTTCCTCCTCACTCTCGTGTTGTGATGCTCTATACATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR TCA 90 bp | AGAGTTGCTACTCCAAGCCCACACTTTTCCATGTATAGAGCATCACAACACGAGTGGGGAAGATGTAGCTaGGAACAGCCTGGAGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: RVATPSPHFSMYRASQHEWGRCS*EQPGAH Trigger: GTGAGCTCCAGGCTGTTCTCAGCTACATCTTCCCCA...CTCGTGTTGTGATGCTCTATACATGGAAAAGTGTGGGCTTGGAGTAGCAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR TCA 90 bp | TCTTGTGTTCATCCCTCCATATCAAGGCCACCCAAAGAGAGACAGCCTCAGATACAGATTCTGGCAAAGTaGGGCAGTGTACCTGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SCVHPSISRPPKERQPQIQILAK*GSVPVR Trigger: CCTGACAGGTACACTGCCTCACTTTGCCAGAATCTG...TATCTGAGGCTGTCTCTCTTTGGGTGGCCTTGATATGGAGGGATGAACACAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129071.2 |
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| CDS-3UTR GCA 90 bp | AGAGTTGCTACTCCAAGCCCACACTTTTCCATGTATAGAGCATCACAACACGAGCCCTTTGGCTCCTCCTaGCACTCCTCGAACCATTCA | + |
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Preference number: 4 (lower is better) Translates to: RVATPSPHFSMYRASQHEPFGSS*HSSNHS Trigger: TGAATGGTTCGAGGAGTGGCAGGAGGAGCCAAAGGG...CTCGTGTTGTGATGCTCTATACATGGAAAAGTGTGGGCTTGGAGTAGCAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR GCA 90 bp | AACACGAGAGTGAGGAGGAACAAAAAGCTTCAGGGTAGGACTGAACCAACCTATTCACACTCTCCACCTTaGCCTCCAGCTGTGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: NTRVRRNKKLQGRTEPTYSHSPP*PPAVGT Trigger: TGTTCCCACAGCTGGAGGGCAAGGTGGAGAGTGTGA...ATAGGTTGGTTCAGTCCTACCCTGAAGCTTTTTGTTCCTCCTCACTCTCGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR GCA 90 bp | GGCTTGGTTCATCGGCAGTGGTATCTTTTGGTGTGTTCCTTTAACCCACTTCTAGGTAGCTCCTCGGGGTaGAGCCAGATAGTACTGGTT | + |
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Preference number: 4 (lower is better) Translates to: GLVHRQWYLLVCSFNPLLGSSSG*SQIVLV Trigger: AACCAGTACTATCTGGCTGCACCCCGAGGAGCTACC...TAGAAGTGGGTTAAAGGAACACACCAAAAGATACCACTGCCGATGAACCAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR GCA 90 bp | TGGGTGCCTGACCATAGCTTGGAGTTGGGTGTAGGAAAGGCATGGGAGCATTCTTTTGAGCCAAGAGCCTaGAGATCTGAGTACAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: WVPDHSLELGVGKAWEHSFEPRA*RSEYKF Trigger: GAACTTGTACTCAGATCTGCAGGCTCTTGGCTCAAA...AGAATGCTCCCATGCCTTTCCTACACCCAACTCCAAGCTATGGTCAGGCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR CCA 90 bp | AACACGAGAGTGAGGAGGAACAAAAAGCTTCAGGGTAGGACTGAACCAACCTATGGAAGGCGATCTCACTaGAACCCCCTCGAGGGTAAT | + |
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Preference number: 4 (lower is better) Translates to: NTRVRRNKKLQGRTEPTYGRRSH*NPLEGN Trigger: ATTACCCTCGAGGGGGTTCCAGTGAGATCGCCTTCC...ATAGGTTGGTTCAGTCCTACCCTGAAGCTTTTTGTTCCTCCTCACTCTCGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR CCA 90 bp | ACAAGGGTTCTTGTGTTCATCCCTCCATATCAAGGCCACCCAAAGAGAGACAGCTTGGGGATGGGGGTTTaGGCTCTTATGGAAGCCATT | + |
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Preference number: 4 (lower is better) Translates to: TRVLVFIPPYQGHPKRDSLGMGV*ALMEAI Trigger: AATGGCTTCCATAAGAGCCCAAACCCCCATCCCCAA...GCTGTCTCTCTTTGGGTGGCCTTGATATGGAGGGATGAACACAAGAACCCTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129071.2 |
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| CDS-3UTR CCA 90 bp | AAGGGTTCTTGTGTTCATCCCTCCATATCAAGGCCACCCAAAGAGAGACAGCCTGGGAAGTCCAGATTCTaGCAAAGTGAGGCAGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: KGSCVHPSISRPPKERQPGKSRF*QSEAVY Trigger: GTACACTGCCTCACTTTGCCAGAATCTGGACTTCCC...AGGCTGTCTCTCTTTGGGTGGCCTTGATATGGAGGGATGAACACAAGAACCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129071.2 |
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| CDS-3UTR TCA 90 bp | TGTTTATATGTGCAAGGAATTGCTGTAGGAGGGAGGACACCACGAGAAGTTGGGCAGACAGATGAAGATTaGGAGCATGCTCAGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: CLYVQGIAVGGRTPREVGQTDED*EHAQTR Trigger: CCTGGTCTGAGCATGCTCTCAATCTTCATCTGTCTG...CCCAACTTCTCGTGGTGTCCTCCCTCCTACAGCAATTCCTTGCACATATAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR GCA 90 bp | GTCTGGCACTTTGAGAGAGTTGCTACTCCAAGCCCACACTTTTCCATGTATAGATCAACCAGCAGAGCATaGAAGGAAAAGGCGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VWHFERVATPSPHFSMYRSTSRA*KEKAVW Trigger: CCACACCGCCTTTTCCTTGCATGCTCTGCTGGTTGA...TCTATACATGGAAAAGTGTGGGCTTGGAGTAGCAACTCTCTCAAAGTGCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR CCA 90 bp | TATAACAGAGCTCTGGCTGCCCTGGACTTGCTTCATAAACTAGTTCTGGCTTCAAACAGCCGCCCGCCTTaGTATGTTGTTCCAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: YNRALAALDLLHKLVLASNSRPP*YVVPAQ Trigger: TTGTGCTGGAACAACATACCAAGGCGGGCGGCTGTT...TGAAGCCAGAACTAGTTTATGAAGCAAGTCCAGGGCAGCCAGAGCTCTGTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR CCA 90 bp | GTCTGGCACTTTGAGAGAGTTGCTACTCCAAGCCCACACTTTTCCATGTATAGATCCTCCCACTGTACATaGGGAACTCCTTTCGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VWHFERVATPSPHFSMYRSSHCT*GTPFGH Trigger: ATGGCCGAAAGGAGTTCCCCATGTACAGTGGGAGGA...TCTATACATGGAAAAGTGTGGGCTTGGAGTAGCAACTCTCTCAAAGTGCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTTTTGTGCCTTGACCTTTGAGCCAAGAGCCTGCAGATCTGAGTACAAGCAGGTGAAGATATCTTaGCCTTGCCCTCCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FFFCALTFEPRACRSEYKQVKIS*PCPPAV Trigger: CACAGCTGGAGGGCAAGGCCAAGATATCTTCACCTG...CTTGTACTCAGATCTGCAGGCTCTTGGCTCAAAGGTCAAGGCACAAAAGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTATATGTGCAAGGAATTGCTGTAGGAGGGAGGACACCACGAGAAGTTGGGGCAATGGGAGGAACTTaGGTAGAACTGCATGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLYVQGIAVGGRTPREVGAMGGT*VELHER Trigger: TCTCTCATGCAGTTCTACTCAAGTTCCTCCCATTGC...CCCAACTTCTCGTGGTGTCCTCCCTCCTACAGCAATTCCTTGCACATATAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR TCA 90 bp | TCCTCTGGCTCTTCTCTGAACGGACTACATCTTCTTCTTTTGTGCCTTGACCTTCAGACAGATGAAGATTaGGAGCATGCTCAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGSSLNGLHLLLLCLDLQTDED*EHAQTR Trigger: CCTGGTCTGAGCATGCTCTCAATCTTCATCTGTCTG...AAGGTCAAGGCACAAAAGAAGAAGATGTAGTCCGTTCAGAGAAGAGCCAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCTGGCTCTTCTCTGAACGGACTACATCTTCTTCTTTTGTGCCTTGACCTTGGTTGGATCCTTGCTTaGTGGGAAGGCAATGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGSSLNGLHLLLLCLDLGWILA*WEGNEE Trigger: CTCTTCATTGCCTTCCCATCAAGCAAGGATCCAACC...AAGGTCAAGGCACAAAAGAAGAAGATGTAGTCCGTTCAGAGAAGAGCCAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
||
| CDS-3UTR GCA 90 bp | TACATCTTCTTCTTTTGTGCCTTGACCTTTGAGCCAAGAGCCTGCAGATCTGAGAAGATATCTTGGCCTTaGCCTCCAGCTGTGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: YIFFFCALTFEPRACRSEKISWP*PPAVGT Trigger: TGTTCCCACAGCTGGAGGGCAAGGCCAAGATATCTT...CTCAGATCTGCAGGCTCTTGGCTCAAAGGTCAAGGCACAAAAGAAGAAGATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
||
| CDS-3UTR TCA 90 bp | ACCCATTCCCCAGGTTATCTCATGTGTATGCAAATACTACAAAATCTGAAAGAAACACGCTCTCCCAGCTaGGTCCAGCAGCACACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: THSPGYLMCMQILQNLKETRSPS*VQQHTL Trigger: CAGAGTGTGCTGCTGGACTCAGCTGGGAGAGCGTGT...TTCTTTCAGATTTTGTAGTATTTGCATACACATGAGATAACCTGGGGAATGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR TCA 90 bp | TATAACAGAGCTCTGGCTGCCCTGGACTTGCTTCATAAACTAGTTCTGGCTTCAAAGAGCCTGCAGATCTaGGTACAAGTTCCGTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YNRALAALDLLHKLVLASKSLQI*VQVPFQ Trigger: CTGAAACGGAACTTGTACTCAGATCTGCAGGCTCTT...TGAAGCCAGAACTAGTTTATGAAGCAAGTCCAGGGCAGCCAGAGCTCTGTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR CCA 90 bp | TATAACAGAGCTCTGGCTGCCCTGGACTTGCTTCATAAACTAGTTCTGGCTTCATGCCCTTCAGTGATCTaGTCCAAGATAAAACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YNRALAALDLLHKLVLASCPSVI*SKIKRP Trigger: TGGCCGTTTTATCTTGGACCAGATCACTGAAGGGCA...TGAAGCCAGAACTAGTTTATGAAGCAAGTCCAGGGCAGCCAGAGCTCTGTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR CCA 90 bp | AACACGAGAGTGAGGAGGAACAAAAAGCTTCAGGGTAGGACTGAACCAACCTATACTCCTTTCGGCCATTaGGCCCTTCTAGTATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NTRVRRNKKLQGRTEPTYTPFGH*ALLVSS Trigger: TGATGATACTAGAAGGGCCCAATGGCCGAAAGGAGT...ATAGGTTGGTTCAGTCCTACCCTGAAGCTTTTTGTTCCTCCTCACTCTCGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR CCA 90 bp | GTCTGGCACTTTGAGAGAGTTGCTACTCCAAGCCCACACTTTTCCATGTATAGAAAGGGGAATGTGTTCTaGAGCCTTTTCCTTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VWHFERVATPSPHFSMYRKGNVF*SLFLGH Trigger: ATGCCCAAGGAAAAGGCTCCAGAACACATTCCCCTT...TCTATACATGGAAAAGTGTGGGCTTGGAGTAGCAACTCTCTCAAAGTGCCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR CCA 90 bp | TGCCTTTCCTCTGGCTCTTCTCTGAACGGACTACATCTTCTTCTTTTGTGCCTTAAGGGGAATGTGTTCTaGAGCCTTTTCCTTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLSSGSSLNGLHLLLLCLKGNVF*SLFLGH Trigger: ATGCCCAAGGAAAAGGCTCCAGAACACATTCCCCTT...AAGGCACAAAAGAAGAAGATGTAGTCCGTTCAGAGAAGAGCCAGAGGAAAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
||
| 3UTR CAA 72 bp | CCTGAGGGTTTTCTTAGGTCTGGCACTTTGAGAGAGTaGCTACTCCAAGCCCACACTTTTCCATGTATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PEGFLRSGTLRE*LLQAHTFPCIE Trigger: CTCTATACATGGAAAAGTGTGGGCTTGGAGTAGCAACTCTCTCAAAGTGCCAGACCTAAGAAAACCCTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR TCA 90 bp | TATAACAGAGCTCTGGCTGCCCTGGACTTGCTTCATAAACTAGTTCTGGCTTCATGCCTTTCAGACAGATaGAGATTGAGAGCATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YNRALAALDLLHKLVLASCLSDR*RLRACS Trigger: TGAGCATGCTCTCAATCTTCATCTGTCTGAAAGGCA...TGAAGCCAGAACTAGTTTATGAAGCAAGTCCAGGGCAGCCAGAGCTCTGTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR TCA 90 bp | TTCTTCTTTTGTGCCTTGACCTTTGAGCCAAGAGCCTGCAGATCTGAGTACAAGTGCCTTTCAGACAGATaGAGATTGAGAGCATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FFFCALTFEPRACRSEYKCLSDR*RLRACS Trigger: TGAGCATGCTCTCAATCTTCATCTGTCTGAAAGGCA...CTTGTACTCAGATCTGCAGGCTCTTGGCTCAAAGGTCAAGGCACAAAAGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
||
| CDS-3UTR TCA 90 bp | TACATCTTCTTCTTTTGTGCCTTGACCTTTGAGCCAAGAGCCTGCAGATCTGAGTTGATGGGAAGGCAATaGAGAGAAGGGGAATGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YIFFFCALTFEPRACRSELMGRQ*REGECV Trigger: AACACATTCCCCTTCTCTTCATTGCCTTCCCATCAA...CTCAGATCTGCAGGCTCTTGGCTCAAAGGTCAAGGCACAAAAGAAGAAGATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
||
| CDS-3UTR TCA 90 bp | TGTGCCTGGTCTATACATATGAAACAAATGAATTTGTGGTTTAGTTCTGGGACCATGGAAGCCATTGCATaGGGATGCAGCCGAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CAWSIHMKQMNLWFSSGTMEAIA*GCSRAK Trigger: CTTGGCTCGGCTGCATCCTCATGCAATGGCTTCCAT...GGTCCCAGAACTAAACCACAAATTCATTTGTTTCATATGTATAGACCAGGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR CCA 90 bp | TGTGCCTGGTCTATACATATGAAACAAATGAATTTGTGGTTTAGTTCTGGGACCGGTAGAGGTTGGGGATaGGGGTTTGGGCTCTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: CAWSIHMKQMNLWFSSGTGRGWG*GFGLLW Trigger: CCATAAGAGCCCAAACCCCCATCCCCAACCTCTACC...GGTCCCAGAACTAAACCACAAATTCATTTGTTTCATATGTATAGACCAGGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| 3UTR CAA 72 bp | AAACTTAGACCTGAGGGTTTTCTTAGGTCTGGCACTTaGAGAGAGTTGCTACTCCAAGCCCACACTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLRPEGFLRSGT*RELLLQAHTFP Trigger: TGGAAAAGTGTGGGCTTGGAGTAGCAACTCTCTCAAAGTGCCAGACCTAAGAAAACCCTCAGGTCTAAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| 3UTR CAA 72 bp | GTTTCTCTGTATAACAGAGCTCTGGCTGCCCTGGACTaGCTTCATAAACTAGTTCTGGCTTCAGATTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLYNRALAALD*LHKLVLASDSQ Trigger: CTGTGAATCTGAAGCCAGAACTAGTTTATGAAGCAAGTCCAGGGCAGCCAGAGCTCTGTTATACAGAGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR TCA 90 bp | ACCCATTCCCCAGGTTATCTCATGTGTATGCAAATACTACAAAATCTGAAAGAAAACTTGCTGAGGAGCTaGGTCAAGGGCAATGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: THSPGYLMCMQILQNLKENLLRS*VKGNGR Trigger: CCTCCCATTGCCCTTGACTCAGCTCCTCAGCAAGTT...TTCTTTCAGATTTTGTAGTATTTGCATACACATGAGATAACCTGGGGAATGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR CCA 90 bp | TCCATGTATAGAGCATCACAACACGAGAGTGAGGAGGAACAAAAAGCTTCAGGGTTCTTCTTAAGGCCCTaGATGTATTCTTTCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SMYRASQHESEEEQKASGFFLRP*MYSFLP Trigger: TGGGAGGAAAGAATACATCCAGGGCCTTAAGAAGAA...CCCTGAAGCTTTTTGTTCCTCCTCACTCTCGTGTTGTGATGCTCTATACATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR CCA 90 bp | TGTTGTGCCTGGTCTATACATATGAAACAAATGAATTTGTGGTTTAGTTCTGGGTTGGGGATGGGGGTTTaGGCTCTTATGGAAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: CCAWSIHMKQMNLWFSSGLGMGV*ALMEAI Trigger: AATGGCTTCCATAAGAGCCCAAACCCCCATCCCCAA...CCCAGAACTAAACCACAAATTCATTTGTTTCATATGTATAGACCAGGCACAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS TCA 90 bp | CTCTCCCAGCTGAGTCCAGCAGCACACTCTGTACAGTGGCCCTGGTaGGGACAGCGCCCCCGGCCCGCTGAATCAAAGGGATGGTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSQLSPAAHSVQWPW*GQRPRPAESKGWYG Trigger: TCCATACCATCCCTTTGATTCAGCGGGCCGGGGGCGCTGTCCTCACCAGGGCCACTGTACAGAGTGTGCTGCTGGACTCAGCTGGGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070597.13 ENSMUST00000176168.3 ENSMUST00000176364.8 |
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| CDS TCA 90 bp | ACACTCTGTACAGTGGCCCTGGTGAGGACAGCGCCCCCGGCCCGCTaGATCAAAGGGATGGTATGGAAGGCGATCTCACTGGAACCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TLCTVALVRTAPPAR*IKGMVWKAISLEPP Trigger: AGGGGGTTCCAGTGAGATCGCCTTCCATACCATCCCTTTGATTCAGCGGGCCGGGGGCGCTGTCCTCACCAGGGCCACTGTACAGAGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000070597.13 ENSMUST00000176168.3 ENSMUST00000176364.8 |
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| CDS TCA 90 bp | AGGCGGTGTGGCTGGGAGTTACTCCGTAAGTGGGGAAGATGTAGCTaGGAACAGCCTGGAGCTCACGGGAAGCCCCAAGCTGCTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RRCGWELLRKWGRCS*EQPGAHGKPQAAAG Trigger: TCCTGCAGCAGCTTGGGGCTTCCCGTGAGCTCCAGGCTGTTCTCAGCTACATCTTCCCCACTTACGGAGTAACTCCCAGCCACACCGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070597.13 ENSMUST00000176364.8 |
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| CDS GCA 90 bp | AGCTCACGGGAAGCCCCAAGCTGCTGCAGGACTTCAGCTAGGCTCTaGGTAGACGCTCGGCAGAATGGAGAGAAACGAGTCAGTAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSREAPSCCRTSARL*VDARQNGEKRVSSP Trigger: TGGGCTACTGACTCGTTTCTCTCCATTCTGCCGAGCGTCTACGCAGAGCCTAGCTGAAGTCCTGCAGCAGCTTGGGGCTTCCCGTGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070597.13 ENSMUST00000176364.8 |
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| CDS-3UTR CAA 90 bp | CCCCAGGGGTTCTGGGTGCCTGACCATAGCTTGGAGTTGGGTGTAGGAAAGGCACAACAGCCGCCCGCCTaGGTATGTTGTTCCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PQGFWVPDHSLELGVGKAQQPPA*VCCSST Trigger: TGTGCTGGAACAACATACCAAGGCGGGCGGCTGTTG...TGCCTTTCCTACACCCAACTCCAAGCTATGGTCAGGCACCCAGAACCCCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR CAA 90 bp | CCCCAGGGGTTCTGGGTGCCTGACCATAGCTTGGAGTTGGGTGTAGGAAAGGCATTCTTCCTAGCCTCCTaGTCGGTCACCAGGGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PQGFWVPDHSLELGVGKAFFLAS*SVTRGS Trigger: TGAACCCCTGGTGACCGACAAGGAGGCTAGGAAGAA...TGCCTTTCCTACACCCAACTCCAAGCTATGGTCAGGCACCCAGAACCCCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR CAA 90 bp | ACCCAGGACAATAGCCAAGGCAGCCCAGCTCCTGGTGTAGGCTTGAGGACGAGAGTTGGGGATGGGGGTTaGGGCTCTTATGGAAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TQDNSQGSPAPGVGLRTRVGDGG*GSYGSH Trigger: ATGGCTTCCATAAGAGCCCAAACCCCCATCCCCAAC...TCTCGTCCTCAAGCCTACACCAGGAGCTGGGCTGCCTTGGCTATTGTCCTGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129071.2 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGGGTTCTGGGTGCCTGACCATAGCTTGGAGTTGGGTGTAGGAAAGGCAGATGTTCACCAGCTCTaGTCCCTTCTTCACACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PQGFWVPDHSLELGVGKADVHQL*SLLHTD Trigger: GTCAGTGTGAAGAAGGGACAAGAGCTGGTGAACATC...TGCCTTTCCTACACCCAACTCCAAGCTATGGTCAGGCACCCAGAACCCCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS CCA 90 bp | TTCTGGCAAAGTGAGGCAGTGTACCTGTCAGGTAGAGGTTGGGGATaGGGGTTTGGGCTCTTATGGAAGCCATTGCATGAGGATGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FWQSEAVYLSGRGWG*GFGLLWKPLHEDAA Trigger: GGCTGCATCCTCATGCAATGGCTTCCATAAGAGCCCAAACCCCCATCCCCAACCTCTACCTGACAGGTACACTGCCTCACTTTGCCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129071.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGTTCTTGTGTTCATCCCTCCATATCAAGGCCACCCAAAGAGAGACAGCCTGTCACACTCTCCACCTaGCCCTCCAGCTGTGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KGSCVHPSISRPPKERQPVTLST*PSSCGN Trigger: GTTCCCACAGCTGGAGGGCAAGGTGGAGAGTGTGAC...AGGCTGTCTCTCTTTGGGTGGCCTTGATATGGAGGGATGAACACAAGAACCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129071.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGGCACTTTGAGAGAGTTGCTACTCCAAGCCCACACTTTTCCATGTATAGAGGGGGCCCAGTCCAGTaGCCCTTCAGTGATCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VWHFERVATPSPHFSMYRGGPVQ*PFSDLV Trigger: GACCAGATCACTGAAGGGCAACTGGACTGGGCCCCC...TCTATACATGGAAAAGTGTGGGCTTGGAGTAGCAACTCTCTCAAAGTGCCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGGGTTCTGGGTGCCTGACCATAGCTTGGAGTTGGGTGTAGGAAAGGCAACCAACTCCATGTACTaGTCAATGACAGCTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PQGFWVPDHSLELGVGKATNSMY*SMTASS Trigger: GGAAGAAGCTGTCATTGACAAGTACATGGAGTTGGT...TGCCTTTCCTACACCCAACTCCAAGCTATGGTCAGGCACCCAGAACCCCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR CAA 90 bp | TATAACAGAGCTCTGGCTGCCCTGGACTTGCTTCATAAACTAGTTCTGGCTTCACACCACGCTTGCCCTTaGGCTCCTCCTGCCACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YNRALAALDLLHKLVLASHHACP*APPATP Trigger: AGGAGTGGCAGGAGGAGCCAAAGGGCAAGCGTGGTG...TGAAGCCAGAACTAGTTTATGAAGCAAGTCCAGGGCAGCCAGAGCTCTGTTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR CAA 90 bp | TACATCTTCTTCTTTTGTGCCTTGACCTTTGAGCCAAGAGCCTGCAGATCTGAGCACCACGCTTGCCCTTaGGCTCCTCCTGCCACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YIFFFCALTFEPRACRSEHHACP*APPATP Trigger: AGGAGTGGCAGGAGGAGCCAAAGGGCAAGCGTGGTG...CTCAGATCTGCAGGCTCTTGGCTCAAAGGTCAAGGCACAAAAGAAGAAGATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
||
| CDS-3UTR CAA 90 bp | TGGGTGCCTGACCATAGCTTGGAGTTGGGTGTAGGAAAGGCATGGGAGCATTCTAACTCCTTTCGGCCATaGGGCCCTTCTAGTATCATC | + |
|
Preference number: 5 (lower is better) Translates to: WVPDHSLELGVGKAWEHSNSFRP*GPSSII Trigger: GATGATACTAGAAGGGCCCAATGGCCGAAAGGAGTT...AGAATGCTCCCATGCCTTTCCTACACCCAACTCCAAGCTATGGTCAGGCACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR CAA 90 bp | AACACGAGAGTGAGGAGGAACAAAAAGCTTCAGGGTAGGACTGAACCAACCTATGTCACACTCTCCACCTaGCCCTCCAGCTGTGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NTRVRRNKKLQGRTEPTYVTLST*PSSCGN Trigger: GTTCCCACAGCTGGAGGGCAAGGTGGAGAGTGTGAC...ATAGGTTGGTTCAGTCCTACCCTGAAGCTTTTTGTTCCTCCTCACTCTCGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS GCA 90 bp | GATGGTATGGAAGGCGATCTCACTGGAACCCCCTCGAGGGTAATATaGCCCTTGTATGTAGTGGTCAACCAGCAGAGCATGCAAGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: DGMEGDLTGTPSRVI*PLYVVVNQQSMQGK Trigger: TTTTCCTTGCATGCTCTGCTGGTTGACCACTACATACAAGGGGCATATTACCCTCGAGGGGGTTCCAGTGAGATCGCCTTCCATACCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070597.13 ENSMUST00000176168.3 ENSMUST00000176364.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTTGCTACTCCAAGCCCACACTTTTCCATGTATAGAGCATCACAACACGAGGCCCGCCTTGGTATGTaGTTCCAGCACAAGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: RVATPSPHFSMYRASQHEARLGM*FQHKDS Trigger: AGAGTCCTTGTGCTGGAACAACATACCAAGGCGGGC...CTCGTGTTGTGATGCTCTATACATGGAAAAGTGTGGGCTTGGAGTAGCAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
||
| CDS-3UTR CAA 90 bp | TGCCTTTCCTCTGGCTCTTCTCTGAACGGACTACATCTTCTTCTTTTGTGCCTTGAAGATATCTTGGCCTaGCCCTCCAGCTGTGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CLSSGSSLNGLHLLLLCLEDILA*PSSCGN Trigger: GTTCCCACAGCTGGAGGGCAAGGCCAAGATATCTTC...AAGGCACAAAAGAAGAAGATGTAGTCCGTTCAGAGAAGAGCCAGAGGAAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCTGGCTCTTCTCTGAACGGACTACATCTTCTTCTTTTGTGCCTTGACCTTAGCTTCAGGTCCTCCTaGGTGCCTTTCAGACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSGSSLNGLHLLLLCLDLSFRSS*VPFRQM Trigger: CATCTGTCTGAAAGGCACCAAGGAGGACCTGAAGCT...AAGGTCAAGGCACAAAAGAAGAAGATGTAGTCCGTTCAGAGAAGAGCCAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCTGGCTCTTCTCTGAACGGACTACATCTTCTTCTTTTGTGCCTTGACCTTACAGGTGAAGATATCTaGGCCTTGCCCTCCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSGSSLNGLHLLLLCLDLTGEDI*ALPSSC Trigger: ACAGCTGGAGGGCAAGGCCAAGATATCTTCACCTGT...AAGGTCAAGGCACAAAAGAAGAAGATGTAGTCCGTTCAGAGAAGAGCCAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205878.2 |
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| CDS CCA 90 bp | TTGTCAATGACAGCTTCTTCCTTGGGGAACTTCTTCTTAAGGCCCTaGATGTATTCTTTCCTCCCACTGTACATGGGGAACTCCTTTCGG | + |
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Preference number: 5 (lower is better) Translates to: LSMTASSLGNFFLRP*MYSFLPLYMGNSFR Trigger: CCGAAAGGAGTTCCCCATGTACAGTGGGAGGAAAGAATACATCCAGGGCCTTAAGAAGAAGTTCCCCAAGGAAGAAGCTGTCATTGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070597.13 ENSMUST00000176364.8 |
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| CDS CCA 90 bp | CAAGTGCTGATAGGTATTGAACATTCCCGCATTGGAGATGACAACTaGGCAGTAGATGTTCACCAGCTCTTGTCCCTTCTTCACACTGAC | + |
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Preference number: 5 (lower is better) Translates to: QVLIGIEHSRIGDDN*AVDVHQLLSLLHTD Trigger: GTCAGTGTGAAGAAGGGACAAGAGCTGGTGAACATCTACTGCCCAGTTGTCATCTCCAATGCGGGAATGTTCAATACCTATCAGCACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070597.13 ENSMUST00000176168.3 ENSMUST00000176364.8 |
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| CDS-3UTR CAA 90 bp | AGAGTTGCTACTCCAAGCCCACACTTTTCCATGTATAGAGCATCACAACACGAGAGCACAAGGACTCTCTaGCCAGCTTTAGCTAGAACC | + |
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Preference number: 5 (lower is better) Translates to: RVATPSPHFSMYRASQHESTRTL*PALART Trigger: GGTTCTAGCTAAAGCTGGCAAGAGAGTCCTTGTGCT...CTCGTGTTGTGATGCTCTATACATGGAAAAGTGTGGGCTTGGAGTAGCAACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR CAA 90 bp | TCCATGTATAGAGCATCACAACACGAGAGTGAGGAGGAACAAAAAGCTTCAGGGTTCTTCTTTTGTGCCTaGACCTTTGAGCCAAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: SMYRASQHESEEEQKASGFFFCA*TFEPRA Trigger: GGCTCTTGGCTCAAAGGTCAAGGCACAAAAGAAGAA...CCCTGAAGCTTTTTGTTCCTCCTCACTCTCGTGTTGTGATGCTCTATACATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR CAA 90 bp | GTCTGGCACTTTGAGAGAGTTGCTACTCCAAGCCCACACTTTTCCATGTATAGAATGACAGCTTCTTCCTaGGGGAACTTCTTCTTAAGG | + |
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Preference number: 5 (lower is better) Translates to: VWHFERVATPSPHFSMYRMTASS*GNFFLR Trigger: CCTTAAGAAGAAGTTCCCCAAGGAAGAAGCTGTCAT...TCTATACATGGAAAAGTGTGGGCTTGGAGTAGCAACTCTCTCAAAGTGCCAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR CAA 90 bp | ACCCATTCCCCAGGTTATCTCATGTGTATGCAAATACTACAAAATCTGAAAGAAGTTGGGGATGGGGGTTaGGGCTCTTATGGAAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: THSPGYLMCMQILQNLKEVGDGG*GSYGSH Trigger: ATGGCTTCCATAAGAGCCCAAACCCCCATCCCCAAC...TTCTTTCAGATTTTGTAGTATTTGCATACACATGAGATAACCTGGGGAATGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR CAA 90 bp | TGTTGTGCCTGGTCTATACATATGAAACAAATGAATTTGTGGTTTAGTTCTGGGAGCTTCAGGTCCTCCTaGGTGCCTTTCAGACAGATG | + |
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Preference number: 5 (lower is better) Translates to: CCAWSIHMKQMNLWFSSGSFRSS*VPFRQM Trigger: CATCTGTCTGAAAGGCACCAAGGAGGACCTGAAGCT...CCCAGAACTAAACCACAAATTCATTTGTTTCATATGTATAGACCAGGCACAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS-3UTR CAA 90 bp | TGTTGTGCCTGGTCTATACATATGAAACAAATGAATTTGTGGTTTAGTTCTGGGACTGAGAAAGCTTGTTaGAGAACTTTCTTCCTAGCC | + |
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Preference number: 5 (lower is better) Translates to: CCAWSIHMKQMNLWFSSGTEKAC*RTFFLA Trigger: GGCTAGGAAGAAAGTTCTCAAACAAGCTTTCTCAGT...CCCAGAACTAAACCACAAATTCATTTGTTTCATATGTATAGACCAGGCACAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS TCA 72 bp | ACAGTGGCCCTGGTGAGGACAGCGCCCCCGGCCCGCTaGATCAAAGGGATGGTATGGAAGGCGATCTCACTG | + |
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Preference number: 6 (lower is better) Translates to: TVALVRTAPPAR*IKGMVWKAISL Trigger: CAGTGAGATCGCCTTCCATACCATCCCTTTGATTCAGCGGGCCGGGGGCGCTGTCCTCACCAGGGCCACTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070597.13 ENSMUST00000176168.3 ENSMUST00000176364.8 |
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| CDS GCA 72 bp | AGAACAGCCTGGAGCTCACGGGAAGCCCCAAGCTGCTaGAGGACTTCAGCTAGGCTCTGCGTAGACGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: RTAWSSREAPSC*RTSARLCVDAR Trigger: CCGAGCGTCTACGCAGAGCCTAGCTGAAGTCCTGCAGCAGCTTGGGGCTTCCCGTGAGCTCCAGGCTGTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070597.13 ENSMUST00000176364.8 |
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| CDS GCA 72 bp | CTAGAACCGCAGCTGAGGCCAGTCCCCCAATGCCGCTaGCGATCACCACTGCATCCAGCTTCTCTGGTACTC | + |
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Preference number: 6 (lower is better) Translates to: LEPQLRPVPQCR*RSPLHPASLVL Trigger: GAGTACCAGAGAAGCTGGATGCAGTGGTGATCGGCAGCGGCATTGGGGGACTGGCCTCAGCTGCGGTTCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS GCA 72 bp | CTGAGAACAGCCTGGAGCTCACGGGAAGCCCCAAGCTaGTGCAGGACTTCAGCTAGGCTCTGCGTAGACGCT | + |
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Preference number: 6 (lower is better) Translates to: LRTAWSSREAPS*CRTSARLCVDA Trigger: AGCGTCTACGCAGAGCCTAGCTGAAGTCCTGCAGCAGCTTGGGGCTTCCCGTGAGCTCCAGGCTGTTCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070597.13 ENSMUST00000176364.8 |
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| CDS CAA 90 bp | CAACAGCCGCCCGCCTTGGTATGTTGTTCCAGCACAAGGACTCTCTaGCCAGCTTTAGCTAGAACCGCAGCTGAGGCCAGTCCCCCAATG | + |
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Preference number: 6 (lower is better) Translates to: QQPPALVCCSSTRTL*PALARTAAEASPPM Trigger: CATTGGGGGACTGGCCTCAGCTGCGGTTCTAGCTAAAGCTGGCAAGAGAGTCCTTGTGCTGGAACAACATACCAAGGCGGGCGGCTGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS TCA 72 bp | TCCCTTCTTCACACTGACACCACACGCTCTCCCAGCTaGGTCCAGCAGCACACTCTGTACAGTGGCCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SLLHTDTTRSPS*VQQHTLYSGPG Trigger: ACCAGGGCCACTGTACAGAGTGTGCTGCTGGACTCAGCTGGGAGAGCGTGTGGTGTCAGTGTGAAGAAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070597.13 ENSMUST00000176168.3 ENSMUST00000176364.8 |
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| CDS GCA 72 bp | GAAGCCCCAAGCTGCTGCAGGACTTCAGCTAGGCTCTaGGTAGACGCTCGGCAGAATGGAGAGAAACGAGTC | + |
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Preference number: 6 (lower is better) Translates to: EAPSCCRTSARL*VDARQNGEKRV Trigger: GACTCGTTTCTCTCCATTCTGCCGAGCGTCTACGCAGAGCCTAGCTGAAGTCCTGCAGCAGCTTGGGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070597.13 ENSMUST00000176364.8 |
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| CDS CCA 72 bp | ACCAGGCCTTACCATCGCCAGCTGCTTCTTCACATCTaGCAGATGGCGGACAGTCTCTGGCAACAAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TRPYHRQLLLHI*QMADSLWQQVL Trigger: CAGCACTTGTTGCCAGAGACTGTCCGCCATCTGCCAGATGTGAAGAAGCAGCTGGCGATGGTAAGGCCTGGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070597.13 ENSMUST00000176168.3 ENSMUST00000176364.8 |
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| CDS CCA 72 bp | ACCATTCAAAGGCCATGGGTACCAGCGCAGTCATTGTaGATCGGTCTGGGAATCGCTCCTCCCAGGTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: TIQRPWVPAQSL*IGLGIAPPRLD Trigger: ATCCAACCTGGGAGGAGCGATTCCCAGACCGATCCACAATGACTGCGCTGGTACCCATGGCCTTTGAATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070597.13 ENSMUST00000176168.3 ENSMUST00000176364.8 ENSMUST00000205878.2 |
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| CDS CAA 72 bp | CCCGCCTTGGTATGTTGTTCCAGCACAAGGACTCTCTaGCCAGCTTTAGCTAGAACCGCAGCTGAGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: PALVCCSSTRTL*PALARTAAEAS Trigger: ACTGGCCTCAGCTGCGGTTCTAGCTAAAGCTGGCAAGAGAGTCCTTGTGCTGGAACAACATACCAAGGCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS CAA 90 bp | GGTGAAGATATCTTGGCCTGTCAGGTAGAGGTTGGGGATGGGGGTTaGGGCTCTTATGGAAGCCATTGCATGAGGATGCAGCCGAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: GEDILACQVEVGDGG*GSYGSHCMRMQPSQ Trigger: TTGGCTCGGCTGCATCCTCATGCAATGGCTTCCATAAGAGCCCAAACCCCCATCCCCAACCTCTACCTGACAGGCCAAGATATCTTCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070597.13 ENSMUST00000176168.3 ENSMUST00000176364.8 |
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| CDS CAA 90 bp | AAAGTGAGGCAGTGTACCTGTCAGGTAGAGGTTGGGGATGGGGGTTaGGGCTCTTATGGAAGCCATTGCATGAGGATGCAGCCGAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: KVRQCTCQVEVGDGG*GSYGSHCMRMQPSQ Trigger: TTGGCTCGGCTGCATCCTCATGCAATGGCTTCCATAAGAGCCCAAACCCCCATCCCCAACCTCTACCTGACAGGTACACTGCCTCACTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129071.2 |
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| CDS TCA 72 bp | GTCAAGGGCAATGGGAGGAACTTGAGTAGAACTGCATaGGAGACTCCACGGGCCACCACCTTAACCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: VKGNGRNLSRTA*ETPRATTLTNS Trigger: GGAGTTGGTTAAGGTGGTGGCCCGTGGAGTCTCTCATGCAGTTCTACTCAAGTTCCTCCCATTGCCCTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070597.13 ENSMUST00000176364.8 |
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| CDS GCA 72 bp | GAAGGCGATCTCACTGGAACCCCCTCGAGGGTAATATaGCCCTTGTATGTAGTGGTCAACCAGCAGAGCATG | + |
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Preference number: 6 (lower is better) Translates to: EGDLTGTPSRVI*PLYVVVNQQSM Trigger: CATGCTCTGCTGGTTGACCACTACATACAAGGGGCATATTACCCTCGAGGGGGTTCCAGTGAGATCGCCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070597.13 ENSMUST00000176168.3 ENSMUST00000176364.8 |
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| CDS CCA 72 bp | TGGCAAAGTGAGGCAGTGTACCTGTCAGGTAGAGGTTaGGGATGGGGGTTTGGGCTCTTATGGAAGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: WQSEAVYLSGRG*GWGFGLLWKPL Trigger: CAATGGCTTCCATAAGAGCCCAAACCCCCATCCCCAACCTCTACCTGACAGGTACACTGCCTCACTTTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129071.2 |
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| CDS CAA 72 bp | CCCAAAGGTATGACAACAGCCGCCCGCCTTGGTATGTaGTTCCAGCACAAGGACTCTCTTGCCAGCTTTAGC | + |
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Preference number: 6 (lower is better) Translates to: PKGMTTAARLGM*FQHKDSLASFS Trigger: GCTAAAGCTGGCAAGAGAGTCCTTGTGCTGGAACAACATACCAAGGCGGGCGGCTGTTGTCATACCTTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS CCA 72 bp | CATTTTCCCCAAAGGTATGACAACAGCCGCCCGCCTTaGTATGTTGTTCCAGCACAAGGACTCTCTTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: HFPQRYDNSRPP*YVVPAQGLSCQ Trigger: CTGGCAAGAGAGTCCTTGTGCTGGAACAACATACCAAGGCGGGCGGCTGTTGTCATACCTTTGGGGAAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070597.13 |
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| CDS CAA 72 bp | GATCTCACTGGAACCCCCTCGAGGGTAATATGCCCCTaGTATGTAGTGGTCAACCAGCAGAGCATGCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: DLTGTPSRVICP*YVVVNQQSMQG Trigger: TCCTTGCATGCTCTGCTGGTTGACCACTACATACAAGGGGCATATTACCCTCGAGGGGGTTCCAGTGAGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070597.13 ENSMUST00000176168.3 ENSMUST00000176364.8 |
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| CDS CCA 72 bp | GCTGAATCAAAGGGATGGTATGGAAGGCGATCTCACTaGAACCCCCTCGAGGGTAATATGCCCCTTGTATGT | + |
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Preference number: 6 (lower is better) Translates to: AESKGWYGRRSH*NPLEGNMPLVC Trigger: ACATACAAGGGGCATATTACCCTCGAGGGGGTTCCAGTGAGATCGCCTTCCATACCATCCCTTTGATTCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070597.13 ENSMUST00000176168.3 ENSMUST00000176364.8 |
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| CDS CCA 72 bp | CTGCTTCTTCACATCTGGCAGATGGCGGACAGTCTCTaGCAACAAGTGCTGATAGGTATTGAACATTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: LLLHIWQMADSL*QQVLIGIEHSR Trigger: GCGGGAATGTTCAATACCTATCAGCACTTGTTGCCAGAGACTGTCCGCCATCTGCCAGATGTGAAGAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070597.13 ENSMUST00000176168.3 ENSMUST00000176364.8 |
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| CDS CCA 72 bp | TGGTCAACCAGCAGAGCATGCAAGGAAAAGGCGGTGTaGCTGGGAGTTACTCCTTGTTTGAGAACTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: WSTSRACKEKAV*LGVTPCLRTFF Trigger: GAAGAAAGTTCTCAAACAAGGAGTAACTCCCAGCCACACCGCCTTTTCCTTGCATGCTCTGCTGGTTGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176168.3 |
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| CDS CAA 72 bp | ACTCCACGGGCCACCACCTTAACCAACTCCATGTACTaGTCAATGACAGCTTCTTCCTTGGGGAACTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TPRATTLTNSMY*SMTASSLGNFF Trigger: GAAGAAGTTCCCCAAGGAAGAAGCTGTCATTGACAAGTACATGGAGTTGGTTAAGGTGGTGGCCCGTGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070597.13 ENSMUST00000176364.8 |
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| CDS CAA 90 bp | ACCACCTTAACCAACTCCATGTACTTGTCAATGACAGCTTCTTCCTaGGGGAACTTCTTCTTAAGGCCCTGGATGTATTCTTTCCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: TTLTNSMYLSMTASS*GNFFLRPWMYSFLP Trigger: TGGGAGGAAAGAATACATCCAGGGCCTTAAGAAGAAGTTCCCCAAGGAAGAAGCTGTCATTGACAAGTACATGGAGTTGGTTAAGGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070597.13 ENSMUST00000176364.8 |
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| CDS CCA 72 bp | ATAGGTATTGAACATTCCCGCATTGGAGATGACAACTaGGCAGTAGATGTTCACCAGCTCTTGTCCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: IGIEHSRIGDDN*AVDVHQLLSLL Trigger: AAGAAGGGACAAGAGCTGGTGAACATCTACTGCCCAGTTGTCATCTCCAATGCGGGAATGTTCAATACCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070597.13 ENSMUST00000176168.3 ENSMUST00000176364.8 |
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| CDS CAA 72 bp | ACCAACTCCATGTACTTGTCAATGACAGCTTCTTCCTaGGGGAACTTCTTCTTAAGGCCCTGGATGTATTCT | + |
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Preference number: 6 (lower is better) Translates to: TNSMYLSMTASS*GNFFLRPWMYS Trigger: AGAATACATCCAGGGCCTTAAGAAGAAGTTCCCCAAGGAAGAAGCTGTCATTGACAAGTACATGGAGTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070597.13 ENSMUST00000176364.8 |
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