Pregenerated sensors for RETREG3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017802Ensembl transcript IDs: ENSMUST00000017946.6, ENSMUST00000107295.10
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGACGTGGCCTCAAGAGGGAAAAACAGAAAGGGCAGGAGGGTCCCTaGCATCCACCTGGGCTTCCTCTTCTGAGGATCACCACACCAGAT | + |
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Preference number: 1 (lower is better) Translates to: RRGLKREKQKGQEGP*HPPGLPLLRITTPD Trigger: ATCTGGTGTGGTGATCCTCAGAAGAGGAAGCCCAGGTGGATGTCAGGGACCCTCCTGCCCTTTCTGTTTTTCCCTCTTGAGGCCACGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107295.10 |
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| 3UTR GCA 90 bp | CAAACAGCACTACCTCCTCAAAGGGGAATCAAATCCCTACTTTGTTaGCCGTGTACCACCCTGATGGAGAGAAGCCTCCCTTGGGGCGGG | + |
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Preference number: 1 (lower is better) Translates to: QTALPPQRGIKSLLC*PCTTLMERSLPWGG Trigger: CCCGCCCCAAGGGAGGCTTCTCTCCATCAGGGTGGTACACGGGCAACAAAGTAGGGATTTGATTCCCCTTTGAGGAGGTAGTGCTGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR TCA 90 bp | GGGTTAACAGCACCAAAGACAACCACACAGCTCCAGGAGCTTTCATaGGACCTCAAGGTAGGCACTCACCAACCCAGCCAGCCAGCTGAT | + |
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Preference number: 1 (lower is better) Translates to: GLTAPKTTTQLQELS*DLKVGTHQPSQPAD Trigger: ATCAGCTGGCTGGCTGGGTTGGTGAGTGCCTACCTTGAGGTCTCATGAAAGCTCCTGGAGCTGTGTGGTTGTCTTTGGTGCTGTTAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR TCA 90 bp | CTCAAAGGGGAATCAAATCCCTACTTTGTTGCCCGTGTACCACCCTaGTGGAGAGAAGCCTCCCTTGGGGCGGGAGTATGTTCTCACTTC | + |
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Preference number: 1 (lower is better) Translates to: LKGESNPYFVARVPP*WREASLGAGVCSHF Trigger: GAAGTGAGAACATACTCCCGCCCCAAGGGAGGCTTCTCTCCATCAGGGTGGTACACGGGCAACAAAGTAGGGATTTGATTCCCCTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR CCA 90 bp | TCAGCCCCACAGCATGTTCACATTTCTCAAACTCTGCAAGCACTCTaGAGTGCTCAGGGTCAGCCCTCTAGAAATGAAGATGGGCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: SAPQHVHISQTLQAL*SAQGQPSRNEDGLR Trigger: CCTGAGCCCATCTTCATTTCTAGAGGGCTGACCCTGAGCACTCCAGAGTGCTTGCAGAGTTTGAGAAATGTGAACATGCTGTGGGGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR CCA 90 bp | CCCAATTCACAGTGGAGGACTTGGGAGATTCAGAGCAGGTTCCACTaGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: PNSQWRTWEIQSRFH*YKKRPGFACSPSLP Trigger: AGGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATCTCCCAAGTCCTCCACTGTGAATTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR TCA 90 bp | ATGGAGAGAAGCCTCCCTTGGGGCGGGAGTATGTTCTCACTTCAGTaGCTAAGCACAGATACGATGTCTCACTGGCAGCAGGTAAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: MERSLPWGGSMFSLQ*LSTDTMSHWQQVRV Trigger: TACTCTTACCTGCTGCCAGTGAGACATCGTATCTGTGCTTAGTCACTGAAGTGAGAACATACTCCCGCCCCAAGGGAGGCTTCTCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR GCA 90 bp | ATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTaGTCCCCTTCCCTCCCTCTTCCTCTTGCCAACTCCCAAAGCATG | + |
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Preference number: 1 (lower is better) Translates to: IQSRFHWYKKRPGFA*SPSLPLPLANSQSM Trigger: CATGCTTTGGGAGTTGGCAAGAGGAAGAGGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR TCA 90 bp | TTGATTCGGGGCTGCAGAACACCTACCCTTGAGAATGGTCTCTGCTaGTTACCAACATCCTTACTAACTGGGCTCATCCTTACAGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: LIRGCRTPTLENGLC*LPTSLLTGLILTGV Trigger: AACTCCTGTAAGGATGAGCCCAGTTAGTAAGGATGTTGGTAATCAGCAGAGACCATTCTCAAGGGTAGGTGTTCTGCAGCCCCGAATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR GCA 90 bp | CAGGGACAGGAAGTGGGCCTGCTCTGCAGAACCAAAGGGCACACTTaGTTTGAGAACACAAATCAAATCATGGTAAAAGACACAGATGAT | + |
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Preference number: 1 (lower is better) Translates to: QGQEVGLLCRTKGHT*FENTNQIMVKDTDD Trigger: ATCATCTGTGTCTTTTACCATGATTTGATTTGTGTTCTCAAAGCAAGTGTGCCCTTTGGTTCTGCAGAGCAGGCCCACTTCCTGTCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR CCA 90 bp | GAATTTGGCTTGAGCTCTGATTTGGGAGACAGAGAGGCAGTATGCTaGCACAGGTTGAGAACCAATGATCATTTAAGGGGTTTTCACATG | + |
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Preference number: 1 (lower is better) Translates to: EFGLSSDLGDREAVC*HRLRTNDHLRGFHM Trigger: CATGTGAAAACCCCTTAAATGATCATTGGTTCTCAACCTGTGCCAGCATACTGCCTCTCTGTCTCCCAAATCAGAGCTCAAGCCAAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR CCA 90 bp | ATGGATATGATATTGCTTTGCTCATTGCTCAGATTGATGGTCAAATaGAGCCAAGGGTTAACAGCACCAAAGACAACCACACAGCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: MDMILLCSLLRLMVK*SQGLTAPKTTTQLQ Trigger: CTGGAGCTGTGTGGTTGTCTTTGGTGCTGTTAACCCTTGGCTCCATTTGACCATCAATCTGAGCAATGAGCAAAGCAATATCATATCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR TCA 90 bp | CACATTTCTCAAACTCTGCAAGCACTCTGGAGTGCTCAGGGTCAGCCCTCTAGAGGGCTCTTGTATCAGTaGGGGCCCCTGAGCACCCAG | + |
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Preference number: 2 (lower is better) Translates to: HISQTLQALWSAQGQPSRGLLYQ*GPLSTQ Trigger: CTGGGTGCTCAGGGGCCCTCACTGATACAAGAGCCC...TCTAGAGGGCTGACCCTGAGCACTCCAGAGTGCTTGCAGAGTTTGAGAAATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR CAA 90 bp | GCAAACAGCACTACCTCCTCAAAGGGGAATCAAATCCCTACTTTGTaGCCCGTGTACCACCCTGATGGAGAGAAGCCTCCCTTGGGGCGG | + |
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Preference number: 2 (lower is better) Translates to: ANSTTSSKGNQIPTL*PVYHPDGEKPPLGR Trigger: CCGCCCCAAGGGAGGCTTCTCTCCATCAGGGTGGTACACGGGCAACAAAGTAGGGATTTGATTCCCCTTTGAGGAGGTAGTGCTGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR TCA 90 bp | CACATTTCTCAAACTCTGCAAGCACTCTGGAGTGCTCAGGGTCAGCCCTCTAGAGCCCGTGTACCACCCTaGTGGAGAGAAGCCTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: HISQTLQALWSAQGQPSRARVPP*WREASL Trigger: AAGGGAGGCTTCTCTCCATCAGGGTGGTACACGGGC...TCTAGAGGGCTGACCCTGAGCACTCCAGAGTGCTTGCAGAGTTTGAGAAATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCGCCCGTGTACCACCCTaGTGGAGAGAAGCCTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: SRFHWYKKRPGFACSPSLARVPP*WREASL Trigger: AAGGGAGGCTTCTCTCCATCAGGGTGGTACACGGGC...GAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR GCA 90 bp | CACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCTCTTCCTCTCTTAGCAGGCCTCTaGATCAGCCAGGCCACCCAG | + |
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Preference number: 2 (lower is better) Translates to: HWYKKRPGFACSPSLPLPLLAGL*ISQATQ Trigger: CTGGGTGGCCTGGCTGATGCAGAGGCCTGCTAAGAG...AGGAAGAGGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR GCA 90 bp | GGGTCCCTGACATCCACCTGGGCTTCCTCTTCTGAGGATCACCACACCAGATTAGAAAAGACCTGGATTTaGTTGCTCCCCTTCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: GSLTSTWASSSEDHHTRLEKTWI*LLPFPP Trigger: GGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTC...TAATCTGGTGTGGTGATCCTCAGAAGAGGAAGCCCAGGTGGATGTCAGGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107295.10 |
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| 3UTR CAA 90 bp | CCTACTTTGTTGCCCGTGTACCACCCTGATGGAGAGAAGCCTCCCTaGGGGCGGGAGTATGTTCTCACTTCAGTGACTAAGCACAGATAC | + |
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Preference number: 2 (lower is better) Translates to: PTLLPVYHPDGEKPP*GREYVLTSVTKHRY Trigger: GTATCTGTGCTTAGTCACTGAAGTGAGAACATACTCCCGCCCCAAGGGAGGCTTCTCTCCATCAGGGTGGTACACGGGCAACAAAGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR TCA 90 bp | GATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCATCAGTGAGGGCCCCTaGGCACCCAGACCTAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: DSEQVPLVQEKTWICLLPISEGP*APRPKS Trigger: GCTTTTAGGTCTGGGTGCTCAGGGGCCCTCACTGAT...GGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR TCA 90 bp | TTCACATTTCTCAAACTCTGCAAGCACTCTGGAGTGCTCAGGGTCAGCCCTCTAGTGGCTCCAGTGAGGTaGGGAGAAGAGATGGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: FTFLKLCKHSGVLRVSPLVAPVR*GEEMGS Trigger: AGAGCCCATCTCTTCTCCTCACCTCACTGGAGCCAC...TAGAGGGCTGACCCTGAGCACTCCAGAGTGCTTGCAGAGTTTGAGAAATGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGGTGGCTCTTGGGATGAACGCCATGGCCATTTGTAAAGTGCTACTTTGCCTTCTGTGGCTCCAGTaGGGTGAGGAGAAGAGATGG | + |
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Preference number: 2 (lower is better) Translates to: ELVALGMNAMAICKVLLCLLWLQ*GEEKRW Trigger: CCATCTCTTCTCCTCACCTCACTGGAGCCACAGAAG...GCAAAGTAGCACTTTACAAATGGCCATGGCGTTCATCCCAAGAGCCACCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCGAAGTGGGCCTGCTCTaGAGAACCAAAGGGCACACT | + |
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Preference number: 2 (lower is better) Translates to: SRFHWYKKRPGFACSPSLEVGLL*RTKGHT Trigger: AGTGTGCCCTTTGGTTCTGCAGAGCAGGCCCACTTC...GAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR GCA 90 bp | CACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCTCTTCCTGAAGTGGGCCTGCTCTaGAGAACCAAAGGGCACACT | + |
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Preference number: 2 (lower is better) Translates to: HWYKKRPGFACSPSLPLPEVGLL*RTKGHT Trigger: AGTGTGCCCTTTGGTTCTGCAGAGCAGGCCCACTTC...AGGAAGAGGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR CCA 90 bp | GGAGGACTTGGGAGATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATCTCAGGGACAGGAAGTaGGCCTGCTCTGCAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: GGLGRFRAGSTGTRKDLDLRDRK*ACSAEP Trigger: TGGTTCTGCAGAGCAGGCCCACTTCCTGTCCCTGAG...ATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATCTCCCAAGTCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR CCA 90 bp | CCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCTCTTCCAAAGTGCTGGGGGAGTaGTCCCTGAGGATCAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: PLVQEKTWICLLPFPPSSKVLGE*SLRISK Trigger: TTTGCTGATCCTCAGGGACCACTCCCCCAGCACTTT...GGAAGAGGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR CAA 90 bp | AAAGCAAACAGCACTACCTCCTCAAAGGGGAATCAAATCCCTACTTaGTTGCCCGTGTACCACCCTGATGGAGAGAAGCCTCCCTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: KANSTTSSKGNQIPT*LPVYHPDGEKPPLG Trigger: CCCCAAGGGAGGCTTCTCTCCATCAGGGTGGTACACGGGCAACAAAGTAGGGATTTGATTCCCCTTTGAGGAGGTAGTGCTGTTTGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCACTGGGTTCTTCCCTTaGCCCATCACAGTAAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SRFHWYKKRPGFACSPSLTGFFP*PITVSG Trigger: CCCACTTACTGTGATGGGGCAAGGGAAGAACCCAGT...GAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCGACAGAGAGGCAGTATaGTGGCACAGGTTGAGAACC | + |
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Preference number: 2 (lower is better) Translates to: SRFHWYKKRPGFACSPSLDREAV*WHRLRT Trigger: GGTTCTCAACCTGTGCCAGCATACTGCCTCTCTGTC...GAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR GCA 90 bp | GGAGGACTTGGGAGATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATACTGGGTTCTTCCCTTaGCCCATCACAGTAAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: GGLGRFRAGSTGTRKDLDTGFFP*PITVSG Trigger: CCCACTTACTGTGATGGGGCAAGGGAAGAACCCAGT...ATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATCTCCCAAGTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR GCA 90 bp | ACATCCTTACTAACTGGGCTCATCCTTACAGGAGTTAGGAAGTGGTATGGTAAGCTCTTAGCAGGCCTCTaGATCAGCCAGGCCACCCAG | + |
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Preference number: 2 (lower is better) Translates to: TSLLTGLILTGVRKWYGKLLAGL*ISQATQ Trigger: CTGGGTGGCCTGGCTGATGCAGAGGCCTGCTAAGAG...CTTACCATACCACTTCCTAACTCCTGTAAGGATGAGCCCAGTTAGTAAGGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR CCA 90 bp | ACTGACTATGAAACAGGCACCTGCCATTCCTCTTCTCACTGTTATTCACTCCCTACTCTGCAAGCACTCTaGAGTGCTCAGGGTCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: TDYETGTCHSSSHCYSLPTLQAL*SAQGQP Trigger: GGGCTGACCCTGAGCACTCCAGAGTGCTTGCAGAGT...AGGGAGTGAATAACAGTGAGAAGAGGAATGGCAGGTGCCTGTTTCATAGTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR TCA 90 bp | ACATCCTTACTAACTGGGCTCATCCTTACAGGAGTTAGGAAGTGGTATGGTAAGATCAGTGAGGGCCCCTaGGCACCCAGACCTAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: TSLLTGLILTGVRKWYGKISEGP*APRPKS Trigger: GCTTTTAGGTCTGGGTGCTCAGGGGCCCTCACTGAT...CTTACCATACCACTTCCTAACTCCTGTAAGGATGAGCCCAGTTAGTAAGGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR GCA 90 bp | CCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCTCTTCCACATTTCTCAAACTCTaGAAGCACTCTGGAGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: PLVQEKTWICLLPFPPSSTFLKL*KHSGVL Trigger: GAGCACTCCAGAGTGCTTGCAGAGTTTGAGAAATGT...GGAAGAGGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR CCA 90 bp | AAGCAAACAGCACTACCTCCTCAAAGGGGAATCAAATCCCTACTTTGTTGCCCGTTCAGGGGACAAGACTaGGTTCTTCCCTTGCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: KQTALPPQRGIKSLLCCPFRGQD*VLPLPH Trigger: ATGGGGCAAGGGAAGAACCCAGTCTTGTCCCCTGAA...CGGGCAACAAAGTAGGGATTTGATTCCCCTTTGAGGAGGTAGTGCTGTTTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR TCA 90 bp | GGAGGACTTGGGAGATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATCAGAACACCTACCCTTaGGAATGGTCTCTGCTGATT | + |
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Preference number: 2 (lower is better) Translates to: GGLGRFRAGSTGTRKDLDQNTYP*EWSLLI Trigger: AATCAGCAGAGACCATTCTCAAGGGTAGGTGTTCTG...ATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATCTCCCAAGTCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR TCA 90 bp | ACTGACTATGAAACAGGCACCTGCCATTCCTCTTCTCACTGTTATTCACTCCCTTGGGGGAGTGGTCCCTaGGGATCAGCAAAGGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: TDYETGTCHSSSHCYSLPWGSGP*GSAKVN Trigger: ATTAACCTTTGCTGATCCTCAGGGACCACTCCCCCA...AGGGAGTGAATAACAGTGAGAAGAGGAATGGCAGGTGCCTGTTTCATAGTCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCAGCTACACACACTCATaGAAACACGCAAAACCCCAA | + |
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Preference number: 2 (lower is better) Translates to: SRFHWYKKRPGFACSPSLSYTHS*KHAKPQ Trigger: TTGGGGTTTTGCGTGTTTGCATGAGTGTGTGTAGCT...GAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR CCA 90 bp | CACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCTCTTCCTCTGTTATTCACTCCCTaGCCTCTATCTTGTCCATCA | + |
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Preference number: 2 (lower is better) Translates to: HWYKKRPGFACSPSLPLPLLFTP*PLSCPS Trigger: TGATGGACAAGATAGAGGCCAGGGAGTGAATAACAG...AGGAAGAGGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR CAA 90 bp | CAGCAAAGGTTAATGCAAGAGGGAAAGAGGATAGAAGAATTTGGCTaGAGCTCTGATTTGGGAGACAGAGAGGCAGTATGCTGGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: QQRLMQEGKRIEEFG*SSDLGDREAVCWHR Trigger: CCTGTGCCAGCATACTGCCTCTCTGTCTCCCAAATCAGAGCTCAAGCCAAATTCTTCTATCCTCTTTCCCTCTTGCATTAACCTTTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR TCA 90 bp | GCAGCACATAAAAATGGGCTCTGTCCAACATCCCTCACCCAAACACAAAAGTGCGGTTTTCACATGATTTaGTTCGGGGCTGCAGAACAC | + |
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Preference number: 2 (lower is better) Translates to: AAHKNGLCPTSLTQTQKCGFHMI*FGAAEH Trigger: GTGTTCTGCAGCCCCGAATCAAATCATGTGAAAACC...GCACTTTTGTGTTTGGGTGAGGGATGTTGGACAGAGCCCATTTTTATGTGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR TCA 90 bp | CCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCTCTTCCCAGGTTGAGAACCAATaGTCATTTAAGGGGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: PLVQEKTWICLLPFPPSSQVENQ*SFKGFS Trigger: TGAAAACCCCTTAAATGATCATTGGTTCTCAACCTG...GGAAGAGGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR-3UTR CCA 90 bp | GATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCACAGGAGTTAGGAAGTaGTATGGTAAGAAGAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: DSEQVPLVQEKTWICLLPTGVRK*YGKKSW Trigger: CCAGCTCTTCTTACCATACCACTTCCTAACTCCTGT...GGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| 3UTR CAA 90 bp | AGGAGGAGCAAGGGAAGGAGGAGGGACATAAACATGGATATGATATaGCTTTGCTCATTGCTCAGATTGATGGTCAAATGGAGCCAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: RRSKGRRRDINMDMI*LCSLLRLMVKWSQG Trigger: CCCTTGGCTCCATTTGACCATCAATCTGAGCAATGAGCAAAGCAATATCATATCCATGTTTATGTCCCTCCTCCTTCCCTTGCTCCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR-3UTR TCA 90 bp | CACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCTCTTCCTAGGGCACACTTGCTTTaGGAACACAAATCAAATCAT | + |
|
Preference number: 2 (lower is better) Translates to: HWYKKRPGFACSPSLPLPRAHLL*EHKSNH Trigger: ATGATTTGATTTGTGTTCTCAAAGCAAGTGTGCCCT...AGGAAGAGGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCTTGAGAACCCTAAAGTaGGGAGATGCCATTATTATG | + |
|
Preference number: 2 (lower is better) Translates to: SRFHWYKKRPGFACSPSLLRTLK*GDAIIM Trigger: CATAATAATGGCATCTCCCCACTTTAGGGTTCTCAA...GAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR-3UTR TCA 90 bp | GGAGGACTTGGGAGATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATAGGGCACACTTGCTTTaGGAACACAAATCAAATCAT | + |
|
Preference number: 2 (lower is better) Translates to: GGLGRFRAGSTGTRKDLDRAHLL*EHKSNH Trigger: ATGATTTGATTTGTGTTCTCAAAGCAAGTGTGCCCT...ATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATCTCCCAAGTCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR-3UTR GCA 90 bp | GATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCACCAAAGGGCACACTTaGTTTGAGAACACAAATCAA | + |
|
Preference number: 2 (lower is better) Translates to: DSEQVPLVQEKTWICLLPTKGHT*FENTNQ Trigger: TTGATTTGTGTTCTCAAAGCAAGTGTGCCCTTTGGT...GGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGACTTGGGAGATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGAGAACCCTAAAGTaGGGAGATGCCATTATTATG | + |
|
Preference number: 2 (lower is better) Translates to: GGLGRFRAGSTGTRKDLDLRTLK*GDAIIM Trigger: CATAATAATGGCATCTCCCCACTTTAGGGTTCTCAA...ATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATCTCCCAAGTCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR CAA 90 bp | GGAAGGAGGAGGGACATAAACATGGATATGATATTGCTTTGCTCATaGCTCAGATTGATGGTCAAATGGAGCCAAGGGTTAACAGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: GRRRDINMDMILLCS*LRLMVKWSQGLTAP Trigger: TGGTGCTGTTAACCCTTGGCTCCATTTGACCATCAATCTGAGCAATGAGCAAAGCAATATCATATCCATGTTTATGTCCCTCCTCCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCTTCCTCTTCTGAGGATCACCACACCAGATTAGCTATTATCAGATTAATGGGTTTTCACATGATTTaGTTCGGGGCTGCAGAACAC | + |
|
Preference number: 2 (lower is better) Translates to: WASSSEDHHTRLAIIRLMGFHMI*FGAAEH Trigger: GTGTTCTGCAGCCCCGAATCAAATCATGTGAAAACC...CATTAATCTGATAATAGCTAATCTGGTGTGGTGATCCTCAGAAGAGGAAGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107295.10 |
||
| 3UTR-3UTR CCA 90 bp | AACATGGATATGATATTGCTTTGCTCATTGCTCAGATTGATGGTCAAATGGAGCTTCAGGGGACAAGACTaGGTTCTTCCCTTGCCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: NMDMILLCSLLRLMVKWSFRGQD*VLPLPH Trigger: ATGGGGCAAGGGAAGAACCCAGTCTTGTCCCCTGAA...GCTCCATTTGACCATCAATCTGAGCAATGAGCAAAGCAATATCATATCCATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR CAA 90 bp | AGGGACATAAACATGGATATGATATTGCTTTGCTCATTGCTCAGATaGATGGTCAAATGGAGCCAAGGGTTAACAGCACCAAAGACAACC | + |
|
Preference number: 2 (lower is better) Translates to: RDINMDMILLCSLLR*MVKWSQGLTAPKTT Trigger: GGTTGTCTTTGGTGCTGTTAACCCTTGGCTCCATTTGACCATCAATCTGAGCAATGAGCAAAGCAATATCATATCCATGTTTATGTCCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR TCA 72 bp | ACTCCTGTAGCTGCTGCCTGGCTTCTGTGGCTCCAGTaGGGTGAGGAGAAGAGATGGGCTCTTGTATCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TPVAAAWLLWLQ*GEEKRWALVSV Trigger: CACTGATACAAGAGCCCATCTCTTCTCCTCACCTCACTGGAGCCACAGAAGCCAGGCAGCAGCTACAGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR TCA 72 bp | GCACCAAAGACAACCACACAGCTCCAGGAGCTTTCATaGGACCTCAAGGTAGGCACTCACCAACCCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: APKTTTQLQELS*DLKVGTHQPSQ Trigger: CTGGCTGGGTTGGTGAGTGCCTACCTTGAGGTCTCATGAAAGCTCCTGGAGCTGTGTGGTTGTCTTTGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR TCA 72 bp | AGCCTCCCTTGGGGCGGGAGTATGTTCTCACTTCAGTaGCTAAGCACAGATACGATGTCTCACTGGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLPWGGSMFSLQ*LSTDTMSHWQQ Trigger: CTGCTGCCAGTGAGACATCGTATCTGTGCTTAGTCACTGAAGTGAGAACATACTCCCGCCCCAAGGGAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR TCA 72 bp | GAATCAAATCCCTACTTTGTTGCCCGTGTACCACCCTaGTGGAGAGAAGCCTCCCTTGGGGCGGGAGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: ESNPYFVARVPP*WREASLGAGVC Trigger: ACATACTCCCGCCCCAAGGGAGGCTTCTCTCCATCAGGGTGGTACACGGGCAACAAAGTAGGGATTTGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR TCA 72 bp | GGAGAAGAGATGGGCTCTTGTATCAGTGAGGGCCCCTaGGCACCCAGACCTAAAAGCAAACAGCACTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: GEEMGSCISEGP*APRPKSKQHYL Trigger: GAGGTAGTGCTGTTTGCTTTTAGGTCTGGGTGCTCAGGGGCCCTCACTGATACAAGAGCCCATCTCTTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR-3UTR CAA 90 bp | CACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCTCTTCCTGACTGGGTTCTTCCCTaGCCCCATCACAGTAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: HWYKKRPGFACSPSLPLPDWVLP*PHHSKW Trigger: CCACTTACTGTGATGGGGCAAGGGAAGAACCCAGTC...AGGAAGAGGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR GCA 72 bp | CTACCTCCTCAAAGGGGAATCAAATCCCTACTTTGTTaGCCGTGTACCACCCTGATGGAGAGAAGCCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPPQRGIKSLLC*PCTTLMERSLP Trigger: AGGGAGGCTTCTCTCCATCAGGGTGGTACACGGGCAACAAAGTAGGGATTTGATTCCCCTTTGAGGAGGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR TCA 72 bp | CTCACCCAAACACAAAAGTGCTGGGGGAGTGGTCCCTaGGGATCAGCAAAGGTTAATGCAAGAGGGAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LTQTQKCWGSGP*GSAKVNARGKE Trigger: CTCTTTCCCTCTTGCATTAACCTTTGCTGATCCTCAGGGACCACTCCCCCAGCACTTTTGTGTTTGGGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR-3UTR CAA 90 bp | GATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTCCCTGGCCTCTATCTaGTCCATCAACCAAGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: DSEQVPLVQEKTWICLLPSLASI*SINQEQ Trigger: TTGCTCTTGGTTGATGGACAAGATAGAGGCCAGGGA...GGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR TCA 72 bp | AGGAGGGTCCCTGACATCCACCTGGGCTTCCTCTTCTaGGGATCACCACACCAGATTAGCTATTATCAGATT | + |
|
Preference number: 3 (lower is better) Translates to: RRVPDIHLGFLF*GSPHQISYYQI Trigger: AATCTGATAATAGCTAATCTGGTGTGGTGATCCTCAGAAGAGGAAGCCCAGGTGGATGTCAGGGACCCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107295.10 |
||
| 3UTR-3UTR CAA 90 bp | CACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCTCTTCCTAGATGTCCAAAGTATTaGAGAACCCTAAAGTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HWYKKRPGFACSPSLPLPRCPKY*RTLKWG Trigger: TCCCCACTTTAGGGTTCTCAAATACTTTGGACATCT...AGGAAGAGGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR-3UTR CAA 90 bp | ACTGACTATGAAACAGGCACCTGCCATTCCTCTTCTCACTGTTATTCACTCCCTGGGTTTTCACATGATTaGATTCGGGGCTGCAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: TDYETGTCHSSSHCYSLPGFSHD*IRGCRT Trigger: TGTTCTGCAGCCCCGAATCAAATCATGTGAAAACCC...AGGGAGTGAATAACAGTGAGAAGAGGAATGGCAGGTGCCTGTTTCATAGTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR TCA 72 bp | AAGTGGTATGGTAAGAAGAGCTGGTGGCTCTTGGGATaGACGCCATGGCCATTTGTAAAGTGCTACTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KWYGKKSWWLLG*TPWPFVKCYFA Trigger: AGCAAAGTAGCACTTTACAAATGGCCATGGCGTTCATCCCAAGAGCCACCAGCTCTTCTTACCATACCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR GCA 72 bp | CTAACTTTCACACTCACTGACTATGAAACAGGCACCTaGCATTCCTCTTCTCACTGTTATTCACTCCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LTFTLTDYETGT*HSSSHCYSLPG Trigger: GCCAGGGAGTGAATAACAGTGAGAAGAGGAATGGCAGGTGCCTGTTTCATAGTCAGTGAGTGTGAAAGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGGATATGATATTGCTTTGCTCATTGCTCAGATTGATGGTCAAATGGAGCCAAGACTGGGTTCTTCCCTaGCCCCATCACAGTAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: MDMILLCSLLRLMVKWSQDWVLP*PHHSKW Trigger: CCACTTACTGTGATGGGGCAAGGGAAGAACCCAGTC...TTGGCTCCATTTGACCATCAATCTGAGCAATGAGCAAAGCAATATCATATCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCACATAAAAATGGGCTCTGTCCAACATCCCTCACCCAAACACAAAAGTGCAAGGGCACACTTGCTTaGAGAACACAAATCAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: AAHKNGLCPTSLTQTQKCKGTLA*RTQIKS Trigger: TGATTTGATTTGTGTTCTCAAAGCAAGTGTGCCCTT...GCACTTTTGTGTTTGGGTGAGGGATGTTGGACAGAGCCCATTTTTATGTGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR CCA 72 bp | ATATTGCTTTGCTCATTGCTCAGATTGATGGTCAAATaGAGCCAAGGGTTAACAGCACCAAAGACAACCACA | + |
|
Preference number: 3 (lower is better) Translates to: ILLCSLLRLMVK*SQGLTAPKTTT Trigger: TGTGGTTGTCTTTGGTGCTGTTAACCCTTGGCTCCATTTGACCATCAATCTGAGCAATGAGCAAAGCAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR-3UTR CAA 90 bp | ACATCCTTACTAACTGGGCTCATCCTTACAGGAGTTAGGAAGTGGTATGGTAAGATATTGCTTTGCTCATaGCTCAGATTGATGGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TSLLTGLILTGVRKWYGKILLCS*LRLMVK Trigger: TTTGACCATCAATCTGAGCAATGAGCAAAGCAATAT...CTTACCATACCACTTCCTAACTCCTGTAAGGATGAGCCCAGTTAGTAAGGATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR TCA 90 bp | TTGCCCGTGTACCACCCTGATGGAGAGAAGCCTCCCTTGGGGCGGGAGTATGTTGTCCGTGGCACGTTCTaGGTGCAGAGCTCTGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LPVYHPDGEKPPLGREYVVRGTF*VQSSAA Trigger: CGCCGCAGAGCTCTGCACTCAGAACGTGCCACGGAC...AACATACTCCCGCCCCAAGGGAGGCTTCTCTCCATCAGGGTGGTACACGGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR GCA 90 bp | CCGTGTACCACCCTGATGGAGAGAAGCCTCCCTTGGGGCGGGAGTATGTTCTCACTGAGCAACCGAGGGTaGACAAAGCCCCAGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PCTTLMERSLPWGGSMFSLSNRG*TKPQLS Trigger: CGAGAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAG...TGAGAACATACTCCCGCCCCAAGGGAGGCTTCTCTCCATCAGGGTGGTACACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
||
| CDS-3UTR CCA 90 bp | CACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCTCTTCCTGCCGCCTCAACCTGCTaGTCGCGCTCCCAGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HWYKKRPGFACSPSLPLPAASTC*SRSQEP Trigger: CGGCTCCTGGGAGCGCGACCAGCAGGTTGAGGCGGC...AGGAAGAGGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
||
| CDS-3UTR CCA 90 bp | TTGCCCGTGTACCACCCTGATGGAGAGAAGCCTCCCTTGGGGCGGGAGTATGTTCAGCCGCTGCAGAACTaGCTTCAGTCGCACATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPVYHPDGEKPPLGREYVQPLQN*LQSHIG Trigger: GCCTATGTGCGACTGAAGCCAGTTCTGCAGCGGCTG...AACATACTCCCGCCCCAAGGGAGGCTTCTCTCCATCAGGGTGGTACACGGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | TTGCCCGTGTACCACCCTGATGGAGAGAAGCCTCCCTTGGGGCGGGAGTATGTTTGGGCATCCCAATGCTaGTGTCGTCCTCGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPVYHPDGEKPPLGREYVWASQC*CRPRRP Trigger: TGGACGACGAGGACGACACCAGCATTGGGATGCCCA...AACATACTCCCGCCCCAAGGGAGGCTTCTCTCCATCAGGGTGGTACACGGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR GCA 90 bp | GGAGGACTTGGGAGATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTCCACCAGGGTCCGCTaGGCCGCCTCAACCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLGRFRAGSTGTRKDLDSTRVR*AASTCW Trigger: CCAGCAGGTTGAGGCGGCGCAGCGGACCCTGGTGGA...ATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATCTCCCAAGTCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
||
| CDS-3UTR GCA 90 bp | GATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCCACACCAGGGCTGCCTaGACCCGGCTCAGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSEQVPLVQEKTWICLLPHTRAA*TRLSRG Trigger: GCCTCTGCTGAGCCGGGTGCAGGCAGCCCTGGTGTG...GGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
||
| CDS-3UTR GCA 90 bp | GGCCTCTATCTTGTCCATCAACCAAGAGCAAAAGTGTTAGCACAACCCCCAACCCTCCCACACCAGGGCTaGCTGCACCCGGCTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLYLVHQPRAKVLAQPPTLPHQG*LHPAQQ Trigger: CTGCTGAGCCGGGTGCAGGCAGCCCTGGTGTGGGAG...GGTTGGGGGTTGTGCTAACACTTTTGCTCTTGGTTGATGGACAAGATAGAGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCTGACATCCACCTGGGCTTCCTCTTCTGAGGATCACCACACCAGATTATGCTCTTCGGGGAGGTaGGCCAGAAGGGTCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSLTSTWASSSEDHHTRLCSSGR*ARRVCL Trigger: CAGACAGACCCTTCTGGCCCACCTCCCCGAAGAGCA...TAATCTGGTGTGGTGATCCTCAGAAGAGGAAGCCCAGGTGGATGTCAGGGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107295.10 |
||
| CDS-3UTR TCA 90 bp | GGAGGACTTGGGAGATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATGTCCGTGGCACGTTCTaGGTGCAGAGCTCTGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GGLGRFRAGSTGTRKDLDVRGTF*VQSSAA Trigger: CGCCGCAGAGCTCTGCACTCAGAACGTGCCACGGAC...ATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATCTCCCAAGTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | TTGCCCGTGTACCACCCTGATGGAGAGAAGCCTCCCTTGGGGCGGGAGTATGTTTCTGACAAGGCCAGTTaGATCATACCCTGGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LPVYHPDGEKPPLGREYVSDKAS*IIPWET Trigger: GGTCTCCCAGGGTATGATCCAACTGGCCTTGTCAGA...AACATACTCCCGCCCCAAGGGAGGCTTCTCTCCATCAGGGTGGTACACGGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR TCA 90 bp | TTCACATTTCTCAAACTCTGCAAGCACTCTGGAGTGCTCAGGGTCAGCCCTCTAAGAGCTCGGGCACGCTaGGCAACCGAGGGTGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: FTFLKLCKHSGVLRVSPLRARAR*ATEGAQ Trigger: TTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCT...TAGAGGGCTGACCCTGAGCACTCCAGAGTGCTTGCAGAGTTTGAGAAATGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
||
| CDS-3UTR GCA 90 bp | ACTGACTATGAAACAGGCACCTGCCATTCCTCTTCTCACTGTTATTCACTCCCTTGCGCCGCCTCAACCTaGTGGTCGCGCTCCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDYETGTCHSSSHCYSLPCAAST*WSRSQE Trigger: CTCCTGGGAGCGCGACCAGCAGGTTGAGGCGGCGCA...AGGGAGTGAATAACAGTGAGAAGAGGAATGGCAGGTGCCTGTTTCATAGTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
||
| CDS-3UTR CCA 90 bp | CACATTTCTCAAACTCTGCAAGCACTCTGGAGTGCTCAGGGTCAGCCCTCTAGAATCCCCAGCCCCTGGTaGGGAGCGGTACATCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HISQTLQALWSAQGQPSRIPSPW*GAVHQA Trigger: AGCTTGATGTACCGCTCCCCACCAGGGGCTGGGGAT...TCTAGAGGGCTGACCCTGAGCACTCCAGAGTGCTTGCAGAGTTTGAGAAATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCAGAAGGGTCTGTCTaGGAGGCCTCTGACAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRFHWYKKRPGFACSPSLPEGSV*EASDKA Trigger: GGCCTTGTCAGAGGCCTCCCAGACAGACCCTTCTGG...GAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR CAA 72 bp | TTGCCCGTGTACCACCCTGATGGAGAGAAGCCTCCCTaGGGGCGGGAGTATGTTCTCACTTCAGTGACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPVYHPDGEKPP*GREYVLTSVTK Trigger: CTTAGTCACTGAAGTGAGAACATACTCCCGCCCCAAGGGAGGCTTCTCTCCATCAGGGTGGTACACGGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR TCA 90 bp | AGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCTGTAGCCACGGACACTaGAGTCCAGCCGCTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRFHWYKKRPGFACSPSLCSHGH*SPAAAE Trigger: TTCTGCAGCGGCTGGACTTCAGTGTCCGTGGCTACA...GAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR TCA 90 bp | AGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCATCAGTGTCCAGGTCTaGACTAGGGGCCCGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRFHWYKKRPGFACSPSLISVQV*TRGPEE Trigger: TTCCTCCGGGCCCCTAGTTCAGACCTGGACACTGAT...GAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR GCA 90 bp | CACATTTCTCAAACTCTGCAAGCACTCTGGAGTGCTCAGGGTCAGCCCTCTAGAGTGGCACGTTCTGAGTaGAGAGCTCTGCGGCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HISQTLQALWSAQGQPSRVARSE*RALRRN Trigger: ATTGCGCCGCAGAGCTCTGCACTCAGAACGTGCCAC...TCTAGAGGGCTGACCCTGAGCACTCCAGAGTGCTTGCAGAGTTTGAGAAATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR GCA 90 bp | CACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCTCTTCCTGTGGCACGTTCTGAGTaGAGAGCTCTGCGGCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HWYKKRPGFACSPSLPLPVARSE*RALRRN Trigger: ATTGCGCCGCAGAGCTCTGCACTCAGAACGTGCCAC...AGGAAGAGGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCTGACATCCACCTGGGCTTCCTCTTCTGAGGATCACCACACCAGATTATCTGACAAGGCCAGTTaGATCATACCCTGGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GSLTSTWASSSEDHHTRLSDKAS*IIPWET Trigger: GGTCTCCCAGGGTATGATCCAACTGGCCTTGTCAGA...TAATCTGGTGTGGTGATCCTCAGAAGAGGAAGCCCAGGTGGATGTCAGGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | GATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTGCTCTTCGGGGAGGTaGGCCAGAAGGGTCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSEQVPLVQEKTWICLLPCSSGR*ARRVCL Trigger: CAGACAGACCCTTCTGGCCCACCTCCCCGAAGAGCA...GGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR TCA 90 bp | CCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCTCTTCCCAGGTCTCTGGCAAATaGCTCCTCTGGATCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLVQEKTWICLLPFPPSSQVSGK*LLWITV Trigger: CACAGTGATCCAGAGGAGTCATTTGCCAGAGACCTG...GGAAGAGGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR TCA 90 bp | GGGCGGGAGTATGTTCTCACTTCAGTGACTAAGCACAGATACGATGTCTCACTGATCAGTGTCCAGGTCTaGACTAGGGGCCCGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GREYVLTSVTKHRYDVSLISVQV*TRGPEE Trigger: TTCCTCCGGGCCCCTAGTTCAGACCTGGACACTGAT...CAGTGAGACATCGTATCTGTGCTTAGTCACTGAAGTGAGAACATACTCCCGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR TCA 90 bp | CACATTTCTCAAACTCTGCAAGCACTCTGGAGTGCTCAGGGTCAGCCCTCTAGACTGGCAGGGTCTAGCTaGTTCAGCTCTGATTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HISQTLQALWSAQGQPSRLAGSS*FSSDWS Trigger: GGACCAATCAGAGCTGAATCAGCTAGACCCTGCCAG...TCTAGAGGGCTGACCCTGAGCACTCCAGAGTGCTTGCAGAGTTTGAGAAATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR GCA 90 bp | AAGCAAACAGCACTACCTCCTCAAAGGGGAATCAAATCCCTACTTTGTTGCCCGAGCTGGGCATCCCAATaGTGGTGTCGTCCTCGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KQTALPPQRGIKSLLCCPSWASQ*WCRPRR Trigger: ACGACGAGGACGACACCAGCATTGGGATGCCCAGCT...CGGGCAACAAAGTAGGGATTTGATTCCCCTTTGAGGAGGTAGTGCTGTTTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCTGTAGCGGCCCAACATaGCCAAAAAGGTCAGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: SRFHWYKKRPGFACSPSLCSGPT*PKRSVP Trigger: GGGTACTGACCTTTTTGGCCATGTTGGGCCGCTACA...GAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGTGGCTCTTGGGATGAACGCCATGGCCATTTGTAAAGTGCTACTTTGCTCTTCACTGTCACTGTaGCTGTCCGTGGCACGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELVALGMNAMAICKVLLCSSLSL*LSVARS Trigger: AGAACGTGCCACGGACAGCCACAGTGACAGTGAAGA...GCAAAGTAGCACTTTACAAATGGCCATGGCGTTCATCCCAAGAGCCACCAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | CACATTTCTCAAACTCTGCAAGCACTCTGGAGTGCTCAGGGTCAGCCCTCTAGATCTTCACTGTCACTGTaGCTGTCCGTGGCACGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HISQTLQALWSAQGQPSRSSLSL*LSVARS Trigger: AGAACGTGCCACGGACAGCCACAGTGACAGTGAAGA...TCTAGAGGGCTGACCCTGAGCACTCCAGAGTGCTTGCAGAGTTTGAGAAATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | GCAGCACATAAAAATGGGCTCTGTCCAACATCCCTCACCCAAACACAAAAGTGCTGGGCATCCCAATGCTaGTGTCGTCCTCGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAHKNGLCPTSLTQTQKCWASQC*CRPRRP Trigger: TGGACGACGAGGACGACACCAGCATTGGGATGCCCA...GCACTTTTGTGTTTGGGTGAGGGATGTTGGACAGAGCCCATTTTTATGTGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGTGGCTCTTGGGATGAACGCCATGGCCATTTGTAAAGTGCTACTTTGCAGCGGTACATCAAGCTaGGCATCCCAATGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ELVALGMNAMAICKVLLCSGTSS*ASQCWC Trigger: ACACCAGCATTGGGATGCCCAGCTTGATGTACCGCT...GCAAAGTAGCACTTTACAAATGGCCATGGCGTTCATCCCAAGAGCCACCAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | TTCACATTTCTCAAACTCTGCAAGCACTCTGGAGTGCTCAGGGTCAGCCCTCTAAGTTGGATCATACCCTaGGAGACCAGGCTGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FTFLKLCKHSGVLRVSPLSWIIP*ETRLAR Trigger: CCTTGCCAGCCTGGTCTCCCAGGGTATGATCCAACT...TAGAGGGCTGACCCTGAGCACTCCAGAGTGCTTGCAGAGTTTGAGAAATGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR TCA 90 bp | GGAGGACTTGGGAGATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATCAGGTCTCTGGCAAATaGCTCCTCTGGATCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGLGRFRAGSTGTRKDLDQVSGK*LLWITV Trigger: CACAGTGATCCAGAGGAGTCATTTGCCAGAGACCTG...ATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATCTCCCAAGTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | TTGCCCGTGTACCACCCTGATGGAGAGAAGCCTCCCTTGGGGCGGGAGTATGTTTCTGTTAGAGGTGTTTaGCCTCTTGACAGGTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPVYHPDGEKPPLGREYVSVRGV*PLDRLN Trigger: ATTTAACCTGTCAAGAGGCCAAACACCTCTAACAGA...AACATACTCCCGCCCCAAGGGAGGCTTCTCTCCATCAGGGTGGTACACGGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | TTCACATTTCTCAAACTCTGCAAGCACTCTGGAGTGCTCAGGGTCAGCCCTCTAAGCGGTACATCAAGCTaGGCATCCCAATGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FTFLKLCKHSGVLRVSPLSGTSS*ASQCWC Trigger: ACACCAGCATTGGGATGCCCAGCTTGATGTACCGCT...TAGAGGGCTGACCCTGAGCACTCCAGAGTGCTTGCAGAGTTTGAGAAATGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | ACATCCTTACTAACTGGGCTCATCCTTACAGGAGTTAGGAAGTGGTATGGTAAGATCCCCAGCCCCTGGTaGGGAGCGGTACATCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSLLTGLILTGVRKWYGKIPSPW*GAVHQA Trigger: AGCTTGATGTACCGCTCCCCACCAGGGGCTGGGGAT...CTTACCATACCACTTCCTAACTCCTGTAAGGATGAGCCCAGTTAGTAAGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR CAA 72 bp | AGCACTACCTCCTCAAAGGGGAATCAAATCCCTACTTaGTTGCCCGTGTACCACCCTGATGGAGAGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: STTSSKGNQIPT*LPVYHPDGEKP Trigger: AGGCTTCTCTCCATCAGGGTGGTACACGGGCAACAAAGTAGGGATTTGATTCCCCTTTGAGGAGGTAGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR TCA 90 bp | ACATCCTTACTAACTGGGCTCATCCTTACAGGAGTTAGGAAGTGGTATGGTAAGTGTAGCCACGGACACTaGAGTCCAGCCGCTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSLLTGLILTGVRKWYGKCSHGH*SPAAAE Trigger: TTCTGCAGCGGCTGGACTTCAGTGTCCGTGGCTACA...CTTACCATACCACTTCCTAACTCCTGTAAGGATGAGCCCAGTTAGTAAGGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | ACATCCTTACTAACTGGGCTCATCCTTACAGGAGTTAGGAAGTGGTATGGTAAGACTTCAGCTACATGGTaGCAGAGCTCGGGCACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSLLTGLILTGVRKWYGKTSATW*QSSGTL Trigger: CAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGT...CTTACCATACCACTTCCTAACTCCTGTAAGGATGAGCCCAGTTAGTAAGGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
||
| CDS-3UTR CCA 90 bp | ACATCCTTACTAACTGGGCTCATCCTTACAGGAGTTAGGAAGTGGTATGGTAAGCAGACTTCAGCTACATaGTGGCAGAGCTCGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: TSLLTGLILTGVRKWYGKQTSAT*WQSSGT Trigger: CGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTG...CTTACCATACCACTTCCTAACTCCTGTAAGGATGAGCCCAGTTAGTAAGGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTCCTCTTCTGAGGATCACCACACCAGATTAGCTATTATCAGATTAATGCCAGAAGGGTCTGTCTaGGAGGCCTCTGACAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WASSSEDHHTRLAIIRLMPEGSV*EASDKA Trigger: GGCCTTGTCAGAGGCCTCCCAGACAGACCCTTCTGG...CATTAATCTGATAATAGCTAATCTGGTGTGGTGATCCTCAGAAGAGGAAGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107295.10 |
||
| CDS-3UTR TCA 90 bp | CACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCTCTTCCTAGGTGTTTGGCCTCTTaGCAGGTTAAATGTGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: HWYKKRPGFACSPSLPLPRCLAS*QVKCAI Trigger: AATGGCACATTTAACCTGTCAAGAGGCCAAACACCT...AGGAAGAGGGAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS-3UTR TCA 90 bp | GATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCAGGTGTTTGGCCTCTTaGCAGGTTAAATGTGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: DSEQVPLVQEKTWICLLPRCLAS*QVKCAI Trigger: AATGGCACATTTAACCTGTCAAGAGGCCAAACACCT...GGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS-3UTR CCA 90 bp | TGGGCTTCCTCTTCTGAGGATCACCACACCAGATTAGCTATTATCAGATTAATGAGTTGGATCATACCCTaGGAGACCAGGCTGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WASSSEDHHTRLAIIRLMSWIIP*ETRLAR Trigger: CCTTGCCAGCCTGGTCTCCCAGGGTATGATCCAACT...CATTAATCTGATAATAGCTAATCTGGTGTGGTGATCCTCAGAAGAGGAAGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107295.10 |
||
| CDS-3UTR GCA 90 bp | ATGGATATGATATTGCTTTGCTCATTGCTCAGATTGATGGTCAAATGGAGCCAAAGCTGGGCATCCCAATaGTGGTGTCGTCCTCGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: MDMILLCSLLRLMVKWSQSWASQ*WCRPRR Trigger: ACGACGAGGACGACACCAGCATTGGGATGCCCAGCT...TTGGCTCCATTTGACCATCAATCTGAGCAATGAGCAAAGCAATATCATATCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | CACATTTCTCAAACTCTGCAAGCACTCTGGAGTGCTCAGGGTCAGCCCTCTAGATCTGTTAGAGGTGTTTaGCCTCTTGACAGGTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HISQTLQALWSAQGQPSRSVRGV*PLDRLN Trigger: ATTTAACCTGTCAAGAGGCCAAACACCTCTAACAGA...TCTAGAGGGCTGACCCTGAGCACTCCAGAGTGCTTGCAGAGTTTGAGAAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR TCA 90 bp | ATGGATATGATATTGCTTTGCTCATTGCTCAGATTGATGGTCAAATGGAGCCAACTGGCAGGGTCTAGCTaGTTCAGCTCTGATTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MDMILLCSLLRLMVKWSQLAGSS*FSSDWS Trigger: GGACCAATCAGAGCTGAATCAGCTAGACCCTGCCAG...TTGGCTCCATTTGACCATCAATCTGAGCAATGAGCAAAGCAATATCATATCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | ACATCCTTACTAACTGGGCTCATCCTTACAGGAGTTAGGAAGTGGTATGGTAAGGTCTTTCTCTCTGCTTaGACATCATGTAGCCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSLLTGLILTGVRKWYGKVFLSA*TSCSHG Trigger: TCCGTGGCTACATGATGTCCAAGCAGAGAGAAAGAC...CTTACCATACCACTTCCTAACTCCTGTAAGGATGAGCCCAGTTAGTAAGGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR CAA 72 bp | GATTTGGGAGACAGAGAGGCAGTATGCTGGCACAGGTaGAGAACCAATGATCATTTAAGGGGTTTTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: DLGDREAVCWHR*RTNDHLRGFHM Trigger: CATGTGAAAACCCCTTAAATGATCATTGGTTCTCAACCTGTGCCAGCATACTGCCTCTCTGTCTCCCAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR CAA 72 bp | TTAATGCAAGAGGGAAAGAGGATAGAAGAATTTGGCTaGAGCTCTGATTTGGGAGACAGAGAGGCAGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: LMQEGKRIEEFG*SSDLGDREAVC Trigger: GCATACTGCCTCTCTGTCTCCCAAATCAGAGCTCAAGCCAAATTCTTCTATCCTCTTTCCCTCTTGCATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CCA 90 bp | ATGGATATGATATTGCTTTGCTCATTGCTCAGATTGATGGTCAAATGGAGCCAAGTCTTTCTCTCTGCTTaGACATCATGTAGCCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: MDMILLCSLLRLMVKWSQVFLSA*TSCSHG Trigger: TCCGTGGCTACATGATGTCCAAGCAGAGAGAAAGAC...TTGGCTCCATTTGACCATCAATCTGAGCAATGAGCAAAGCAATATCATATCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| 3UTR CAA 72 bp | AACATGGATATGATATTGCTTTGCTCATTGCTCAGATaGATGGTCAAATGGAGCCAAGGGTTAACAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NMDMILLCSLLR*MVKWSQGLTAP Trigger: TGGTGCTGTTAACCCTTGGCTCCATTTGACCATCAATCTGAGCAATGAGCAAAGCAATATCATATCCATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS CCA 90 bp | GGGCCCAGCACCTCCACCAGGGTCCGCTGCGCCGCCTCAACCTGCTaGTCGCGCTCCCAGGAGCCGGACATAGCTCGGCGGCCCCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GPSTSTRVRCAASTC*SRSQEPDIARRPLK Trigger: TTTCAGGGGCCGCCGAGCTATGTCCGGCTCCTGGGAGCGCGACCAGCAGGTTGAGGCGGCGCAGCGGACCCTGGTGGAGGTGCTGGGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
||
| CDS GCA 90 bp | TCAGCTACATGGTGGCAGAGCTCGGGCACGCTGAGCAACCGAGGGTaGACAAAGCCCCAGCTCTCGTTGTCCAAGGCGTCAGGTCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SATWWQSSGTLSNRG*TKPQLSLSKASGLG Trigger: GCCGAGACCTGACGCCTTGGACAACGAGAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCATGTAGCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
||
| CDS CCA 90 bp | CTCATTCCGACTAGCAGGCAGGACCTGGGTATCCCCAGCCCCTGGTaGGGAGCGGTACATCAAGCTGGGCATCCCAATGCTGGTGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LIPTSRQDLGIPSPW*GAVHQAGHPNAGVV Trigger: GACGACACCAGCATTGGGATGCCCAGCTTGATGTACCGCTCCCCACCAGGGGCTGGGGATACCCAGGTCCTGCCTGCTAGTCGGAATGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS CCA 90 bp | AAGCCTCTTGTTGCTCTTCGGGGAGGTGGGCCAGAAGGGTCTGTCTaGGAGGCCTCTGACAAGGCCAGTTGGATCATACCCTGGGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: KPLVALRGGGPEGSV*EASDKASWIIPWET Trigger: GGTCTCCCAGGGTATGATCCAACTGGCCTTGTCAGAGGCCTCCCAGACAGACCCTTCTGGCCCACCTCCCCGAAGAGCAACAAGAGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS GCA 90 bp | AAGGTTAGATCCTCCAGGAAGGGAACTAAGCAGGAGCTCTGGCAGTaGAGCCTCATTCCGACTAGCAGGCAGGACCTGGGTATCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KVRSSRKGTKQELWQ*SLIPTSRQDLGIPS Trigger: GCTGGGGATACCCAGGTCCTGCCTGCTAGTCGGAATGAGGCTGCACTGCCAGAGCTCCTGCTTAGTTCCCTTCCTGGAGGATCTAACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS CCA 90 bp | GCATCAAGTAGGACAGCAGGAGCCCAGGGATGTAGCGGCCCAACATaGCCAAAAAGGTCAGTACCCCACAGCTCAGCAGGCAGAACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASSRTAGAQGCSGPT*PKRSVPHSSAGRTC Trigger: GCAAGTTCTGCCTGCTGAGCTGTGGGGTACTGACCTTTTTGGCCATGTTGGGCCGCTACATCCCTGGGCTCCTGCTGTCCTACTTGATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
||
| CDS CCA 90 bp | GGGTCTGTCTGGGAGGCCTCTGACAAGGCCAGTTGGATCATACCCTaGGAGACCAGGCTGGCAAGGTTGCTGGTAAGGTTAGATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSVWEASDKASWIIP*ETRLARLLVRLDPP Trigger: TGGAGGATCTAACCTTACCAGCAACCTTGCCAGCCTGGTCTCCCAGGGTATGATCCAACTGGCCTTGTCAGAGGCCTCCCAGACAGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS CCA 90 bp | GGACATCATGTAGCCACGGACACTGAAGTCCAGCCGCTGCAGAACTaGCTTCAGTCGCACATAGGCTCGATCCCACAGACGGTGATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GHHVATDTEVQPLQN*LQSHIGSIPQTVID Trigger: GTCTATCACCGTCTGTGGGATCGAGCCTATGTGCGACTGAAGCCAGTTCTGCAGCGGCTGGACTTCAGTGTCCGTGGCTACATGATGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS CCA 90 bp | GCTGGTAAGGTTAGATCCTCCAGGAAGGGAACTAAGCAGGAGCTCTaGCAGTGCAGCCTCATTCCGACTAGCAGGCAGGACCTGGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: AGKVRSSRKGTKQEL*QCSLIPTSRQDLGI Trigger: GATACCCAGGTCCTGCCTGCTAGTCGGAATGAGGCTGCACTGCCAGAGCTCCTGCTTAGTTCCCTTCCTGGAGGATCTAACCTTACCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
||
| CDS-3UTR CAA 90 bp | AGCAGGTTCCACTGGTACAAGAAAAGACCTGGATTTGCTTGCTCCCCTTCCCTCCCCGGAGGAAGCCTCTaGTTGCTCTTCGGGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRFHWYKKRPGFACSPSLPGGSL*LLFGEV Trigger: CACCTCCCCGAAGAGCAACAAGAGGCTTCCTCCGGG...GAGGGAAGGGGAGCAAGCAAATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS CCA 90 bp | TTCCTTATGAAAATGGTCCCACTAACCCAGACTTCAGCTACATGGTaGCAGAGCTCGGGCACGCTGAGCAACCGAGGGTGCACAAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: FLMKMVPLTQTSATW*QSSGTLSNRGCTKP Trigger: GGGCTTTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTGGGTTAGTGGGACCATTTTCATAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
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| CDS CCA 90 bp | GACAGAAGGCAGCAAGTTCCTCTTCACTGTCACTGTGGCTGTCCGTaGCACGTTCTGAGTGCAGAGCTCTGCGGCGCAATTGTCTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: DRRQQVPLHCHCGCP*HVLSAELCGAIVFL Trigger: GAGAAAGACAATTGCGCCGCAGAGCTCTGCACTCAGAACGTGCCACGGACAGCCACAGTGACAGTGAAGAGGAACTTGCTGCCTTCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS-3UTR CAA 90 bp | CCGTGTACCACCCTGATGGAGAGAAGCCTCCCTTGGGGCGGGAGTATGTTCTCACTCAGCAGGCAGAACTaGCCTGGGTTTTGCTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: PCTTLMERSLPWGGSMFSLSRQN*PGFCFL Trigger: CAAAAAGCAAAACCCAGGCAAGTTCTGCCTGCTGAG...TGAGAACATACTCCCGCCCCAAGGGAGGCTTCTCTCCATCAGGGTGGTACACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
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| CDS-3UTR CAA 90 bp | GGGCGGGAGTATGTTCTCACTTCAGTGACTAAGCACAGATACGATGTCTCACTGGGAGGAAGCCTCTTGTaGCTCTTCGGGGAGGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: GREYVLTSVTKHRYDVSLGGSLL*LFGEVG Trigger: GCCCACCTCCCCGAAGAGCAACAAGAGGCTTCCTCC...CAGTGAGACATCGTATCTGTGCTTAGTCACTGAAGTGAGAACATACTCCCGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS-3UTR CAA 90 bp | GGCCTCTATCTTGTCCATCAACCAAGAGCAAAAGTGTTAGCACAACCCCCAACCCCCGGAGGAAGCCTCTaGTTGCTCTTCGGGGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: GLYLVHQPRAKVLAQPPTPGGSL*LLFGEV Trigger: CACCTCCCCGAAGAGCAACAAGAGGCTTCCTCCGGG...GGTTGGGGGTTGTGCTAACACTTTTGCTCTTGGTTGATGGACAAGATAGAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS-3UTR CAA 90 bp | GGCCTCTATCTTGTCCATCAACCAAGAGCAAAAGTGTTAGCACAACCCCCAACCAAGCCCCAGCTCTCGTaGTCCAAGGCGTCAGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: GLYLVHQPRAKVLAQPPTKPQLS*SKASGL Trigger: GAGACCTGACGCCTTGGACAACGAGAGCTGGGGCTT...GGTTGGGGGTTGTGCTAACACTTTTGCTCTTGGTTGATGGACAAGATAGAGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
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| CDS-3UTR CAA 90 bp | GGGTCCCTGACATCCACCTGGGCTTCCTCTTCTGAGGATCACCACACCAGATTAACCAGGCTGGCAAGGTaGCTGGTAAGGTTAGATCCT | + |
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Preference number: 5 (lower is better) Translates to: GSLTSTWASSSEDHHTRLTRLAR*LVRLDP Trigger: AGGATCTAACCTTACCAGCAACCTTGCCAGCCTGGT...TAATCTGGTGTGGTGATCCTCAGAAGAGGAAGCCCAGGTGGATGTCAGGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107295.10 |
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| CDS TCA 90 bp | GCAATTGTCTTTCTCTCTGCTTGGACATCATGTAGCCACGGACACTaGAGTCCAGCCGCTGCAGAACTGGCTTCAGTCGCACATAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: AIVFLSAWTSCSHGH*SPAAAELASVAHRL Trigger: GAGCCTATGTGCGACTGAAGCCAGTTCTGCAGCGGCTGGACTTCAGTGTCCGTGGCTACATGATGTCCAAGCAGAGAGAAAGACAATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS CCA 90 bp | AGATTCCTTATGAAAATGGTCCCACTAACCCAGACTTCAGCTACATaGTGGCAGAGCTCGGGCACGCTGAGCAACCGAGGGTGCACAAAG | + |
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Preference number: 5 (lower is better) Translates to: RFLMKMVPLTQTSAT*WQSSGTLSNRGCTK Trigger: CTTTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTGGGTTAGTGGGACCATTTTCATAAGGAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
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| CDS-3UTR CAA 90 bp | GGAGGACTTGGGAGATTCAGAGCAGGTTCCACTGGTACAAGAAAAGACCTGGATACCAGGCTGGCAAGGTaGCTGGTAAGGTTAGATCCT | + |
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Preference number: 5 (lower is better) Translates to: GGLGRFRAGSTGTRKDLDTRLAR*LVRLDP Trigger: AGGATCTAACCTTACCAGCAACCTTGCCAGCCTGGT...ATCCAGGTCTTTTCTTGTACCAGTGGAACCTGCTCTGAATCTCCCAAGTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS CCA 90 bp | TCACTGTGGCCATCTAGGTCTTCAGAGCCTTCTGTTAGAGGTGTTTaGCCTCTTGACAGGTTAAATGTGCCATTTTCTGTACAGGAGACC | + |
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Preference number: 5 (lower is better) Translates to: SLWPSRSSEPSVRGV*PLDRLNVPFSVQET Trigger: GGTCTCCTGTACAGAAAATGGCACATTTAACCTGTCAAGAGGCCAAACACCTCTAACAGAAGGCTCTGAAGACCTAGATGGCCACAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS GCA 90 bp | AGGTTAAATGTGCCATTTTCTGTACAGGAGACCTCAGCATCAGAGTaGTCCGAATCTGTGATAGCCAATTCCCTGGCAACAGTAGAATCA | + |
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Preference number: 5 (lower is better) Translates to: RLNVPFSVQETSASE*SESVIANSLATVES Trigger: TGATTCTACTGTTGCCAGGGAATTGGCTATCACAGATTCGGAGCACTCTGATGCTGAGGTCTCCTGTACAGAAAATGGCACATTTAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS CCA 90 bp | TCAGGTCTCGGCACGTTTATCTCAGGCCAAATTTTGTTCTTCCATTaGTCAATACAGACAATGATCATCAAGCTGAATGCAAGCAAAAAC | + |
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Preference number: 5 (lower is better) Translates to: SGLGTFISGQILFFH*SIQTMIIKLNASKN Trigger: GTTTTTGCTTGCATTCAGCTTGATGATCATTGTCTGTATTGACCAATGGAAGAACAAAATTTGGCCTGAGATAAACGTGCCGAGACCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
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| CDS CCA 72 bp | ACCTCCACCAGGGTCCGCTGCGCCGCCTCAACCTGCTaGTCGCGCTCCCAGGAGCCGGACATAGCTCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: TSTRVRCAASTC*SRSQEPDIARR Trigger: CCGCCGAGCTATGTCCGGCTCCTGGGAGCGCGACCAGCAGGTTGAGGCGGCGCAGCGGACCCTGGTGGAGGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
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| CDS GCA 72 bp | AGCACCTCCACCAGGGTCCGCTGCGCCGCCTCAACCTaGTGGTCGCGCTCCCAGGAGCCGGACATAGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: STSTRVRCAAST*WSRSQEPDIAR Trigger: CCGAGCTATGTCCGGCTCCTGGGAGCGCGACCAGCAGGTTGAGGCGGCGCAGCGGACCCTGGTGGAGGTGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
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| CDS GCA 72 bp | TGGTGGCAGAGCTCGGGCACGCTGAGCAACCGAGGGTaGACAAAGCCCCAGCTCTCGTTGTCCAAGGCGTCA | + |
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Preference number: 6 (lower is better) Translates to: WWQSSGTLSNRG*TKPQLSLSKAS Trigger: TGACGCCTTGGACAACGAGAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
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| CDS GCA 72 bp | CTGGTGGGGAGCGGTACATCAAGCTGGGCATCCCAATaGTGGTGTCGTCCTCGTCGTCCAGGCCAGCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: LVGSGTSSWASQ*WCRPRRPGQQD Trigger: ATCCTGCTGGCCTGGACGACGAGGACGACACCAGCATTGGGATGCCCAGCTTGATGTACCGCTCCCCACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS CCA 72 bp | GTGGGGAGCGGTACATCAAGCTGGGCATCCCAATGCTaGTGTCGTCCTCGTCGTCCAGGCCAGCAGGATCCA | + |
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Preference number: 6 (lower is better) Translates to: VGSGTSSWASQC*CRPRRPGQQDP Trigger: TGGATCCTGCTGGCCTGGACGACGAGGACGACACCAGCATTGGGATGCCCAGCTTGATGTACCGCTCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS CCA 72 bp | ACTAGCAGGCAGGACCTGGGTATCCCCAGCCCCTGGTaGGGAGCGGTACATCAAGCTGGGCATCCCAATGCT | + |
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Preference number: 6 (lower is better) Translates to: TSRQDLGIPSPW*GAVHQAGHPNA Trigger: AGCATTGGGATGCCCAGCTTGATGTACCGCTCCCCACCAGGGGCTGGGGATACCCAGGTCCTGCCTGCTAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS TCA 72 bp | AGACTTCAGCTACATGGTGGCAGAGCTCGGGCACGCTaGGCAACCGAGGGTGCACAAAGCCCCAGCTCTCGT | + |
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Preference number: 6 (lower is better) Translates to: RLQLHGGRARAR*ATEGAQSPSSR Trigger: ACGAGAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
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| CDS CCA 72 bp | GTTGCTCTTCGGGGAGGTGGGCCAGAAGGGTCTGTCTaGGAGGCCTCTGACAAGGCCAGTTGGATCATACCC | + |
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Preference number: 6 (lower is better) Translates to: VALRGGGPEGSV*EASDKASWIIP Trigger: GGGTATGATCCAACTGGCCTTGTCAGAGGCCTCCCAGACAGACCCTTCTGGCCCACCTCCCCGAAGAGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS GCA 72 bp | TCCTCCAGGAAGGGAACTAAGCAGGAGCTCTGGCAGTaGAGCCTCATTCCGACTAGCAGGCAGGACCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SSRKGTKQELWQ*SLIPTSRQDLG Trigger: ACCCAGGTCCTGCCTGCTAGTCGGAATGAGGCTGCACTGCCAGAGCTCCTGCTTAGTTCCCTTCCTGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS CCA 72 bp | GTAGCCACGGACACTGAAGTCCAGCCGCTGCAGAACTaGCTTCAGTCGCACATAGGCTCGATCCCACAGACG | + |
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Preference number: 6 (lower is better) Translates to: VATDTEVQPLQN*LQSHIGSIPQT Trigger: CGTCTGTGGGATCGAGCCTATGTGCGACTGAAGCCAGTTCTGCAGCGGCTGGACTTCAGTGTCCGTGGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS CCA 72 bp | AAAATGGTCCCACTAACCCAGACTTCAGCTACATGGTaGCAGAGCTCGGGCACGCTGAGCAACCGAGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: KMVPLTQTSATW*QSSGTLSNRGC Trigger: GCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTGGGTTAGTGGGACCATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
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| CDS CCA 72 bp | ATGAAAATGGTCCCACTAACCCAGACTTCAGCTACATaGTGGCAGAGCTCGGGCACGCTGAGCAACCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: MKMVPLTQTSAT*WQSSGTLSNRG Trigger: CCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTGGGTTAGTGGGACCATTTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
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| CDS CCA 72 bp | CAGCAAGTTCCTCTTCACTGTCACTGTGGCTGTCCGTaGCACGTTCTGAGTGCAGAGCTCTGCGGCGCAATT | + |
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Preference number: 6 (lower is better) Translates to: QQVPLHCHCGCP*HVLSAELCGAI Trigger: AATTGCGCCGCAGAGCTCTGCACTCAGAACGTGCCACGGACAGCCACAGTGACAGTGAAGAGGAACTTGCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS CCA 72 bp | GGACAGAAGGCAGCAAGTTCCTCTTCACTGTCACTGTaGCTGTCCGTGGCACGTTCTGAGTGCAGAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GQKAASSSSLSL*LSVARSECRAL Trigger: CAGAGCTCTGCACTCAGAACGTGCCACGGACAGCCACAGTGACAGTGAAGAGGAACTTGCTGCCTTCTGTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS CCA 72 bp | TGGGAGGCCTCTGACAAGGCCAGTTGGATCATACCCTaGGAGACCAGGCTGGCAAGGTTGCTGGTAAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: WEASDKASWIIP*ETRLARLLVRL Trigger: TAACCTTACCAGCAACCTTGCCAGCCTGGTCTCCCAGGGTATGATCCAACTGGCCTTGTCAGAGGCCTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS GCA 72 bp | TGTGGCTGTCCGTGGCACGTTCTGAGTGCAGAGCTCTaGGGCGCAATTGTCTTTCTCTCTGCTTGGACATCA | + |
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Preference number: 6 (lower is better) Translates to: CGCPWHVLSAEL*GAIVFLSAWTS Trigger: TGATGTCCAAGCAGAGAGAAAGACAATTGCGCCGCAGAGCTCTGCACTCAGAACGTGCCACGGACAGCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS TCA 72 bp | TTTCTCTCTGCTTGGACATCATGTAGCCACGGACACTaGAGTCCAGCCGCTGCAGAACTGGCTTCAGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: FLSAWTSCSHGH*SPAAAELASVA Trigger: TGCGACTGAAGCCAGTTCTGCAGCGGCTGGACTTCAGTGTCCGTGGCTACATGATGTCCAAGCAGAGAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS GCA 72 bp | GTGCCATTTTCTGTACAGGAGACCTCAGCATCAGAGTaGTCCGAATCTGTGATAGCCAATTCCCTGGCAACA | + |
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Preference number: 6 (lower is better) Translates to: VPFSVQETSASE*SESVIANSLAT Trigger: TGTTGCCAGGGAATTGGCTATCACAGATTCGGAGCACTCTGATGCTGAGGTCTCCTGTACAGAAAATGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017946.6 ENSMUST00000107295.10 |
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| CDS CAA 72 bp | CGGCACGTTTATCTCAGGCCAAATTTTGTTCTTCCATaGGTCAATACAGACAATGATCATCAAGCTGAATGC | + |
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Preference number: 6 (lower is better) Translates to: RHVYLRPNFVLP*VNTDNDHQAEC Trigger: GCATTCAGCTTGATGATCATTGTCTGTATTGACCAATGGAAGAACAAAATTTGGCCTGAGATAAACGTGCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
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| CDS CAA 90 bp | GTCAGGTCTCGGCACGTTTATCTCAGGCCAAATTTTGTTCTTCCATaGGTCAATACAGACAATGATCATCAAGCTGAATGCAAGCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: VRSRHVYLRPNFVLP*VNTDNDHQAECKQK Trigger: TTTTTGCTTGCATTCAGCTTGATGATCATTGTCTGTATTGACCAATGGAAGAACAAAATTTGGCCTGAGATAAACGTGCCGAGACCTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017946.6 |
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