Pregenerated sensors for RETREG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049339Ensembl transcript IDs: ENSMUST00000097694.11, ENSMUST00000186037.7, ENSMUST00000187901.2, ENSMUST00000188873.7, ENSMUST00000189650.7, ENSMUST00000190240.7
Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCAGGACAGCAGGCAGGCAGGCAGGCAGGCAGGCAGAGTGGGCTaGCTTCCATCTGACAGCCAGCTTTTCCACATAGTGCCTCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: SQDSRQAGRQAGRVG*LPSDSQLFHIVPLP Trigger: GGGGAGAGGCACTATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTGCCTGCCTGCCTGCCTGCTGTCCTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR TCA 90 bp | CAGGCAGGCAGGCAGGCAGGCAGGCAGAGTGGGCTGGCTTCCATCTaGCAGCCAGCTTTTCCACATAGTGCCTCTCCCCAGAGTGACAGG | + |
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Preference number: 1 (lower is better) Translates to: QAGRQAGRQSGLASI*QPAFPHSASPQSDR Trigger: CCTGTCACTCTGGGGAGAGGCACTATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTGCCTGCCTGCCTGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR TCA 90 bp | TTCTGCCATGGCTCATGGCTCAACCTCTGCATGAGCCTCTTGGTCTaGCTGTACCAGGGAATGGCTGTCTGCCCCCAGGGGAGGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: FCHGSWLNLCMSLLV*LYQGMAVCPQGRRR Trigger: CCTCCTCCTCCCCTGGGGGCAGACAGCCATTCCCTGGTACAGTCAGACCAAGAGGCTCATGCAGAGGTTGAGCCATGAGCCATGGCAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR GCA 90 bp | CAGCACTGCTGGCCTGACACCACCCAGTTCCCTCAGAAGAGAACCTaGCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: QHCWPDTTQFPQKRT*PKAWPVPVGRRSWQ Trigger: TTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGTCAGGCCAGCAGTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR CCA 90 bp | AGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTaGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: RTCPKAWPVPVGRRS*QRVGVTLQRTGDSR Trigger: CCTGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR CCA 90 bp | GAAGCCAGCCAACTCTGCCTCGCTTTCACTCTCTGTTTCCGCCAGTaGCTCATCTCCTGCTGGGGGTGCACTCTTCCCTTGGCGCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: EASQLCLAFTLCFRQ*LISCWGCTLPLALS Trigger: AGAAAGCGCCAAGGGAAGAGTGCACCCCCAGCAGGAGATGAGCCACTGGCGGAAACAGAGAGTGAAAGCGAGGCAGAGTTGGCTGGCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR TCA 90 bp | ATGCCTGCAGCTCATTCTGCCATGGCTCATGGCTCAACCTCTGCATaGGCCTCTTGGTCTGACTGTACCAGGGAATGGCTGTCTGCCCCC | + |
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Preference number: 1 (lower is better) Translates to: MPAAHSAMAHGSTSA*ASWSDCTREWLSAP Trigger: GGGGGCAGACAGCCATTCCCTGGTACAGTCAGACCAAGAGGCTCATGCAGAGGTTGAGCCATGAGCCATGGCAGAATGAGCTGCAGGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR GCA 90 bp | AGGGTACAGTGTAGGTTCAAGGCGACAGTGACCCAAGCACAGCACTaGTGGCCTGACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: RVQCRFKATVTQAQH*WPDTTQFPQKRTCP Trigger: AGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGTCAGGCCAGCAGTGCTGTGCTTGGGTCACTGTCGCCTTGAACCTACACTGTACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR GCA 90 bp | AAGGCTTCCTTGTCTGCAGCCCCCTCCTCTTCGGTGTCCAAAGCTTaGTTTGAGAGGGCTGGAGGCGCACTTAGCAGGTCTTCAGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: KASLSAAPSSSVSKA*FERAGGALSRSSGE Trigger: CTCTCCTGAAGACCTGCTAAGTGCGCCTCCAGCCCTCTCAAAGCAAGCTTTGGACACCGAAGAGGAGGGGGCTGCAGACAAGGAAGCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR TCA 90 bp | CCTCAGTGCTGGCAAAGTGCTAGGGGACCCTGCTGTCCTGCATCATaGGTGCTGAGCTGGACAAGGGTACAGTGTAGGTTCAAGGCGACA | + |
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Preference number: 1 (lower is better) Translates to: PQCWQSARGPCCPAS*VLSWTRVQCRFKAT Trigger: TGTCGCCTTGAACCTACACTGTACCCTTGTCCAGCTCAGCACTCATGATGCAGGACAGCAGGGTCCCCTAGCACTTTGCCAGCACTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR TCA 90 bp | TCTGGTCCCAAGCCCAGCTCTGCATTCAGTTGCTCCAGCTCCCCCTaGTCCAGCAACTCAAAGTCCTCAGTTGTGAGTGCCTCTTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: SGPKPSSAFSCSSSP*SSNSKSSVVSASSS Trigger: GGAGGAAGAGGCACTCACAACTGAGGACTTTGAGTTGCTGGATCAGGGGGAGCTGGAGCAACTGAATGCAGAGCTGGGCTTGGGACCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR CCA 90 bp | GTTTCCGCCAGTGGCTCATCTCCTGCTGGGGGTGCACTCTTCCCTTaGCGCTTTCTCTTGTCATGTTTGTGGTGCAGGGCATCAGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: VSASGSSPAGGALFP*RFLLSCLWCRASAS Trigger: TGAAGCTGATGCCCTGCACCACAAACATGACAAGAGAAAGCGCCAAGGGAAGAGTGCACCCCCAGCAGGAGATGAGCCACTGGCGGAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR GCA 90 bp | GCTTTCACTCTCTGTTTCCGCCAGTGGCTCATCTCCTGCTGGGGGTaGACTCTTCCCTTGGCGCTTTCTCTTGTCATGTTTGTGGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: AFTLCFRQWLISCWG*TLPLALSLVMFVVQ Trigger: CTGCACCACAAACATGACAAGAGAAAGCGCCAAGGGAAGAGTGCACCCCCAGCAGGAGATGAGCCACTGGCGGAAACAGAGAGTGAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR GCA 90 bp | CTCTGCCTCGCTTTCACTCTCTGTTTCCGCCAGTGGCTCATCTCCTaGTGGGGGTGCACTCTTCCCTTGGCGCTTTCTCTTGTCATGTTT | + |
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Preference number: 1 (lower is better) Translates to: LCLAFTLCFRQWLIS*WGCTLPLALSLVMF Trigger: AAACATGACAAGAGAAAGCGCCAAGGGAAGAGTGCACCCCCAGCAGGAGATGAGCCACTGGCGGAAACAGAGAGTGAAAGCGAGGCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR GCA 90 bp | GGCTGTTTTCTTCACATCCACCACTGGAGAGAAGCCAGCCAACTCTaGCTCGCTTTCACTCTCTGTTTCCGCCAGTGGCTCATCTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: GCFLHIHHWREASQL*LAFTLCFRQWLISC Trigger: GCAGGAGATGAGCCACTGGCGGAAACAGAGAGTGAAAGCGAGGCAGAGTTGGCTGGCTTCTCTCCAGTGGTGGATGTGAAGAAAACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR CCA 90 bp | GTACAGTGTAGGTTCAAGGCGACAGTGACCCAAGCACAGCACTGCTaGCCTGACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAA | + |
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Preference number: 1 (lower is better) Translates to: VQCRFKATVTQAQHC*PDTTQFPQKRTCPK Trigger: TTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGTCAGGCCAGCAGTGCTGTGCTTGGGTCACTGTCGCCTTGAACCTACACTGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR CCA 90 bp | TGCCTCGCTTTCACTCTCTGTTTCCGCCAGTGGCTCATCTCCTGCTaGGGGTGCACTCTTCCCTTGGCGCTTTCTCTTGTCATGTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: CLAFTLCFRQWLISC*GCTLPLALSLVMFV Trigger: CACAAACATGACAAGAGAAAGCGCCAAGGGAAGAGTGCACCCCCAGCAGGAGATGAGCCACTGGCGGAAACAGAGAGTGAAAGCGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR CCA 90 bp | TTCCCCCTCCCCCAGCTCTCGGTTCAGAGCCTCTTCTGGCTCACTTaGCAGGCTCTGCTGGTCCAAATCTTCAGAAACATCTGTCAGTTG | + |
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Preference number: 1 (lower is better) Translates to: FPLPQLSVQSLFWLT*QALLVQIFRNICQL Trigger: CAACTGACAGATGTTTCTGAAGATTTGGACCAGCAGAGCCTGCCAAGTGAGCCAGAAGAGGCTCTGAACCGAGAGCTGGGGGAGGGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR TCA 90 bp | GGTGCAGGGCATCAGCTTCAGCTTTCATGCTGTAGTCCAGCTGCATaGGCAAGGGCTCCAGGCGAGTATACATCCTCTGGATCAACTCGT | + |
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Preference number: 1 (lower is better) Translates to: GAGHQLQLSCCSPAA*ARAPGEYTSSGSTR Trigger: ACGAGTTGATCCAGAGGATGTATACTCGCCTGGAGCCCTTGCTCATGCAGCTGGACTACAGCATGAAAGCTGAAGCTGATGCCCTGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR GCA 90 bp | CCCAGCTCTCGGTTCAGAGCCTCTTCTGGCTCACTTGGCAGGCTCTaGTGGTCCAAATCTTCAGAAACATCTGTCAGTTGTGGAGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: PSSRFRASSGSLGRL*WSKSSETSVSCGVV Trigger: CACCACTCCACAACTGACAGATGTTTCTGAAGATTTGGACCAGCAGAGCCTGCCAAGTGAGCCAGAAGAGGCTCTGAACCGAGAGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR CCA 90 bp | AGCTCTCGGTTCAGAGCCTCTTCTGGCTCACTTGGCAGGCTCTGCTaGTCCAAATCTTCAGAAACATCTGTCAGTTGTGGAGTGGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: SSRFRASSGSLGRLC*SKSSETSVSCGVVA Trigger: GGCCACCACTCCACAACTGACAGATGTTTCTGAAGATTTGGACCAGCAGAGCCTGCCAAGTGAGCCAGAAGAGGCTCTGAACCGAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR GCA 90 bp | CTAATACAGAAGGGAAGTCCCTCGCCTCCAAAAGAGAAGAGAACATaGCATCCTCAGTGCTGGCAAAGTGCTAGGGGACCCTGCTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: LIQKGSPSPPKEKRT*HPQCWQSARGPCCP Trigger: AGGACAGCAGGGTCCCCTAGCACTTTGCCAGCACTGAGGATGGCATGTTCTCTTCTCTTTTGGAGGCGAGGGACTTCCCTTCTGTATTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR CCA 90 bp | CTGCAAAGGACAGGAGACAGCAGGGAAATAAAGCCAACGGGAGTGTaGGACAGTAGAGAAAATTATAAAGTGCCTCAACTAAACAACCAA | + |
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Preference number: 1 (lower is better) Translates to: LQRTGDSREIKPTGV*DSRENYKVPQLNNQ Trigger: TTGGTTGTTTAGTTGAGGCACTTTATAATTTTCTCTACTGTCCCACACTCCCGTTGGCTTTATTTCCCTGCTGTCTCCTGTCCTTTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR-3UTR TCA 90 bp | ACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGACAGCACTGCTGGCCTaGCACCACCCAGTTCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: TPPSSLRREPALKLGQCLTALLA*HHPVPS Trigger: TGAGGGAACTGGGTGGTGTCAGGCCAGCAGTGCTGT...CAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGAGTGGGGGTCACGCTaGAAAGGACAGGAGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: PVGRRSWQRVGVTLQRTGEWGSR*KGQETA Trigger: TGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCACTC...TCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR-3UTR GCA 90 bp | CAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGCAGTGGCTCATCTCCTaGTGGGGGTGCACTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: QFPQKRTCPKAWPVPVGRQWLIS*WGCTLP Trigger: GGGAAGAGTGCACCCCCAGCAGGAGATGAGCCACTG...CCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGTGGCTCATCTCCTGCTaGGGGTGCACTCTTCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LWEGGVGKEWGSRCKGQEWLISC*GCTLPL Trigger: CAAGGGAAGAGTGCACCCCCAGCAGGAGATGAGCCA...CTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR-3UTR GCA 90 bp | CAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGGAGTGGGGGTCACGCTaGAAAGGACAGGAGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: QFPQKRTCPKAWPVPVGREWGSR*KGQETA Trigger: TGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCACTC...CCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR-3UTR GCA 90 bp | AAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAACCCAAGCACAGCACTaGTGGCCTGACACCACCCAG | + |
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Preference number: 2 (lower is better) Translates to: KRTCPKAWPVPVGRRSWQTQAQH*WPDTTQ Trigger: CTGGGTGGTGTCAGGCCAGCAGTGCTGTGCTTGGGT...TTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR-3UTR GCA 90 bp | ATTCTGCCATGGCTCATGGCTCAACCTCTGCATGAGCCTCTTGGTCTGACTGTACAGGGAATGGCTGTCTaGCCCCAGGGGAGGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: ILPWLMAQPLHEPLGLTVQGMAV*PQGRRR Trigger: CCTCCTCCTCCCCTGGGGGCAGACAGCCATTCCCTG...TACAGTCAGACCAAGAGGCTCATGCAGAGGTTGAGCCATGAGCCATGGCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR-3UTR CCA 90 bp | CTTCCATCTGACAGCCAGCTTTTCCACATAGTGCCTCTCCCCAGAGTGACAGGGCTCTGTTTCCGCCAGTaGCTCATCTCCTGCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: LPSDSQLFHIVPLPRVTGLCFRQ*LISCWG Trigger: CCCCCAGCAGGAGATGAGCCACTGGCGGAAACAGAG...CCCTGTCACTCTGGGGAGAGGCACTATGTGGAAAAGCTGGCTGTCAGATGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGACTCTTCTGGCTCACTTaGCAGGCTCTGCTGGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: PVGRRSWQRVGVTLQRTGLFWLT*QALLVQ Trigger: TTGGACCAGCAGAGCCTGCCAAGTGAGCCAGAAGAG...TCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR CAA 90 bp | TGTTTCCGCCAGTGGCTCATCTCCTGCTGGGGGTGCACTCTTCCCTaGGCGCTTTCTCTTGTCATGTTTGTGGTGCAGGGCATCAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: CFRQWLISCWGCTLP*ALSLVMFVVQGISF Trigger: GAAGCTGATGCCCTGCACCACAAACATGACAAGAGAAAGCGCCAAGGGAAGAGTGCACCCCCAGCAGGAGATGAGCCACTGGCGGAAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR-3UTR TCA 90 bp | CAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGGGGCTGGCTTCCATCTaGCAGCCAGCTTTTCCACAT | + |
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Preference number: 2 (lower is better) Translates to: QFPQKRTCPKAWPVPVGRGLASI*QPAFPH Trigger: ATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCC...CCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR-3UTR TCA 90 bp | ACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGGGGCTGGCTTCCATCTaGCAGCCAGCTTTTCCACAT | + |
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Preference number: 2 (lower is better) Translates to: TPPSSLRREPALKLGQCLGLASI*QPAFPH Trigger: ATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCC...CAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR-3UTR TCA 90 bp | ACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGGCTGGCTTCCATCTaGCAGCCAGCTTTTCCACAT | + |
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Preference number: 2 (lower is better) Translates to: TTQFPQKRTCPKAWPVPVGLASI*QPAFPH Trigger: ATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCC...CACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAGGTTCAAGGCGACAGTaGCCCAAGCACAGCACTGCT | + |
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Preference number: 2 (lower is better) Translates to: KRTCPKAWPVPVGRRSWQGSRRQ*PKHSTA Trigger: AGCAGTGCTGTGCTTGGGTCACTGTCGCCTTGAACC...TTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAAAGGCAAAGTTGGGGTaGGAGGGTGCTGGATGGAGC | + |
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Preference number: 2 (lower is better) Translates to: KRTCPKAWPVPVGRRSWQKAKLG*EGAGWS Trigger: GCTCCATCCAGCACCCTCTCACCCCAACTTTGCCTT...TTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR-3UTR GCA 90 bp | AAGGCTTCCTTGTCTGCAGCCCCCTCCTCTTCGGTGTCCAAAGCTTGCTTTGAGGAGTGGGGGTCACGCTaGAAAGGACAGGAGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: KASLSAAPSSSVSKACFEEWGSR*KGQETA Trigger: TGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCACTC...CTCAAAGCAAGCTTTGGACACCGAAGAGGAGGGGGCTGCAGACAAGGAAGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR-3UTR GCA 90 bp | CTTCCATCTGACAGCCAGCTTTTCCACATAGTGCCTCTCCCCAGAGTGACAGGGCAAGGCTTCCTTGTCTaGAGCCCCCTCCTCTTCGGT | + |
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Preference number: 2 (lower is better) Translates to: LPSDSQLFHIVPLPRVTGQGFLV*SPLLFG Trigger: ACCGAAGAGGAGGGGGCTGCAGACAAGGAAGCCTTG...CCCTGTCACTCTGGGGAGAGGCACTATGTGGAAAAGCTGGCTGTCAGATGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR-3UTR CCA 90 bp | ACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGGGAGTTGGCAAAGAGTaGGGGTCACGCTGCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: TPPSSLRREPALKLGQCLGVGKE*GSRCKG Trigger: TCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCC...CAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGCATTCAGTTGCTCCAGCTCCCCCTGATCCAGCAACTCAAAGTCCTCAGACCTGCCCTAAAGCTTaGCCAGTGCCTGTGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: ALHSVAPAPPDPATQSPQTCPKA*PVPVGR Trigger: CCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGT...CTGAGGACTTTGAGTTGCTGGATCAGGGGGAGCTGGAGCAACTGAATGCAGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR CAA 90 bp | CTTCCCCCTCCCCCAGCTCTCGGTTCAGAGCCTCTTCTGGCTCACTaGGCAGGCTCTGCTGGTCCAAATCTTCAGAAACATCTGTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: LPPPPALGSEPLLAH*AGSAGPNLQKHLSV Trigger: AACTGACAGATGTTTCTGAAGATTTGGACCAGCAGAGCCTGCCAAGTGAGCCAGAAGAGGCTCTGAACCGAGAGCTGGGGGAGGGGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
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| 3UTR-3UTR TCA 90 bp | CTTCCATCTGACAGCCAGCTTTTCCACATAGTGCCTCTCCCCAGAGTGACAGGGGGGCTGGCTTCCATCTaGCAGCCAGCTTTTCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: LPSDSQLFHIVPLPRVTGGLASI*QPAFPH Trigger: ATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCC...CCCTGTCACTCTGGGGAGAGGCACTATGTGGAAAAGCTGGCTGTCAGATGGAAG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAATGCTGTCCTGCATCATaGGTGCTGAGCTGGACAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KRTCPKAWPVPVGRRSWQCCPAS*VLSWTR Trigger: CCTTGTCCAGCTCAGCACTCATGATGCAGGACAGCA...TTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR-3UTR TCA 90 bp | CATCTCTGGTCCCAAGCCCAGCTCTGCATTCAGTTGCTCCAGCTCCCCCTGATCAGAGGCCTCCTCATCTaGCAGCTCAGAGTCTGTAAT | + |
|
Preference number: 2 (lower is better) Translates to: HLWSQAQLCIQLLQLPLIRGLLI*QLRVCN Trigger: ATTACAGACTCTGAGCTGTCAGATGAGGAGGCCTCT...GATCAGGGGGAGCTGGAGCAACTGAATGCAGAGCTGGGCTTGGGACCAGAGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCATCTGACAGCCAGCTTTTCCACATAGTGCCTCTCCCCAGAGTGACAGGGGGAGTTGGCAAAGAGTaGGGGTCACGCTGCAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LPSDSQLFHIVPLPRVTGGVGKE*GSRCKG Trigger: TCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCC...CCCTGTCACTCTGGGGAGAGGCACTATGTGGAAAAGCTGGCTGTCAGATGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACTCAGTTGTGGAGTGGTaGCCCGAGATACAGAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: VGRRSWQRVGVTLQRTGDSVVEW*PEIQRN Trigger: GTTTCTCTGTATCTCGGGCCACCACTCCACAACTGA...GTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCATCTGACAGCCAGCTTTTCCACATAGTGCCTCTCCCCAGAGTGACAGGGGGGACCCTGCCCCATTaGAGTGCGTATTCACAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LPSDSQLFHIVPLPRVTGGTLPH*SAYSQS Trigger: ACTTTGTGAATACGCACTTCAATGGGGCAGGGTCCC...CCCTGTCACTCTGGGGAGAGGCACTATGTGGAAAAGCTGGCTGTCAGATGGAAG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR-3UTR TCA 90 bp | ATTCTGCCATGGCTCATGGCTCAACCTCTGCATGAGCCTCTTGGTCTGACTGTATGCTCCAGCTCCCCCTaGTCCAGCAACTCAAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: ILPWLMAQPLHEPLGLTVCSSSP*SSNSKS Trigger: GGACTTTGAGTTGCTGGATCAGGGGGAGCTGGAGCA...TACAGTCAGACCAAGAGGCTCATGCAGAGGTTGAGCCATGAGCCATGGCAGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCATCTGACAGCCAGCTTTTCCACATAGTGCCTCTCCCCAGAGTGACAGGGCTAAAGCTTGGCCAGTaGCTGTGGGAAGGAGGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LPSDSQLFHIVPLPRVTGLKLGQ*LWEGGV Trigger: AACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAG...CCCTGTCACTCTGGGGAGAGGCACTATGTGGAAAAGCTGGCTGTCAGATGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCATCTGACAGCCAGCTTTTCCACATAGTGCCTCTCCCCAGAGTGACAGGGGAAGCCAGCCAACTCTaGCTCGCTTTCACTCTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LPSDSQLFHIVPLPRVTGEASQL*LAFTLC Trigger: ACAGAGAGTGAAAGCGAGGCAGAGTTGGCTGGCTTC...CCCTGTCACTCTGGGGAGAGGCACTATGTGGAAAAGCTGGCTGTCAGATGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR-3UTR CCA 90 bp | CCTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGACTCTTGTCATGTTTGTaGTGCAGGGCATCAGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: PVGRRSWQRVGVTLQRTGLLSCL*CRASAS Trigger: TGAAGCTGATGCCCTGCACCACAAACATGACAAGAG...TCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR-3UTR TCA 90 bp | AGTAGGTTCTGTTCTTCTCCCCTAATACAGAAGGGAAGTCCCTCGCCTCCAAAAGGTTCAAGGCGACAGTaGCCCAAGCACAGCACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SRFCSSPLIQKGSPSPPKGSRRQ*PKHSTA Trigger: AGCAGTGCTGTGCTTGGGTCACTGTCGCCTTGAACC...TTTTGGAGGCGAGGGACTTCCCTTCTGTATTAGGGGAGAAGAACAGAACCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR-3UTR TCA 90 bp | CTAATACAGAAGGGAAGTCCCTCGCCTCCAAAAGAGAAGAGAACATGCCATCCTGTCCAAAGCTTGCTTTaGGAGGGCTGGAGGCGCACT | + |
|
Preference number: 2 (lower is better) Translates to: LIQKGSPSPPKEKRTCHPVQSLL*EGWRRT Trigger: AGTGCGCCTCCAGCCCTCTCAAAGCAAGCTTTGGAC...AGGATGGCATGTTCTCTTCTCTTTTGGAGGCGAGGGACTTCCCTTCTGTATTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR-3UTR TCA 90 bp | AGTAGGTTCTGTTCTTCTCCCCTAATACAGAAGGGAAGTCCCTCGCCTCCAAAATGCTGTCCTGCATCATaGGTGCTGAGCTGGACAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SRFCSSPLIQKGSPSPPKCCPAS*VLSWTR Trigger: CCTTGTCCAGCTCAGCACTCATGATGCAGGACAGCA...TTTTGGAGGCGAGGGACTTCCCTTCTGTATTAGGGGAGAAGAACAGAACCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR-3UTR GCA 90 bp | AAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAAAAGAGAAGAGAACATaGCATCCTCAGTGCTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: KRTCPKAWPVPVGRRSWQKEKRT*HPQCWQ Trigger: TTGCCAGCACTGAGGATGGCATGTTCTCTTCTCTTT...TTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTAGGTTCTGTTCTTCTCCCCTAATACAGAAGGGAAGTCCCTCGCCTCCAAAACTTGGCCAGTGCCTGTaGGAAGGAGGAGTTGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SRFCSSPLIQKGSPSPPKLGQCL*EGGVGK Trigger: TTTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAG...TTTTGGAGGCGAGGGACTTCCCTTCTGTATTAGGGGAGAAGAACAGAACCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR-3UTR TCA 90 bp | AGTAGGTTCTGTTCTTCTCCCCTAATACAGAAGGGAAGTCCCTCGCCTCCAAAACTGCATCATGAGTGCTaGGCTGGACAAGGGTACAGT | + |
|
Preference number: 2 (lower is better) Translates to: SRFCSSPLIQKGSPSPPKLHHEC*AGQGYS Trigger: ACTGTACCCTTGTCCAGCTCAGCACTCATGATGCAG...TTTTGGAGGCGAGGGACTTCCCTTCTGTATTAGGGGAGAAGAACAGAACCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR-3UTR GCA 90 bp | TTCCAGTTAACACCTACACAGATCTTACTATCCACTTTACACCCTAGCAGGGAGATCTCCTGCTGGGGGTaGACTCTTCCCTTGGCGCTT | + |
|
Preference number: 2 (lower is better) Translates to: FQLTPTQILLSTLHPSREISCWG*TLPLAL Trigger: AAGCGCCAAGGGAAGAGTGCACCCCCAGCAGGAGAT...CTCCCTGCTAGGGTGTAAAGTGGATAGTAAGATCTGTGTAGGTGTTAACTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR-3UTR GCA 90 bp | ATTCTGCCATGGCTCATGGCTCAACCTCTGCATGAGCCTCTTGGTCTGACTGTATCACTTGGCAGGCTCTaGTGGTCCAAATCTTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: ILPWLMAQPLHEPLGLTVSLGRL*WSKSSE Trigger: TTCTGAAGATTTGGACCAGCAGAGCCTGCCAAGTGA...TACAGTCAGACCAAGAGGCTCATGCAGAGGTTGAGCCATGAGCCATGGCAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTCCAGTTAACACCTACACAGATCTTACTATCCACTTTACACCCTAGCAGGCTTGGCCAGTGCCTGTaGGAAGGAGGAGTTGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: FFQLTPTQILLSTLHPSRLGQCL*EGGVGK Trigger: TTTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAG...CCTGCTAGGGTGTAAAGTGGATAGTAAGATCTGTGTAGGTGTTAACTGGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR CCA 72 bp | AGGACAGCAGGCAGGCAGGCAGGCAGGCAGGCAGAGTaGGCTGGCTTCCATCTGACAGCCAGCTTTTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: RTAGRQAGRQAE*AGFHLTASFST Trigger: TGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTGCCTGCCTGCCTGCCTGCTGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR CCA 72 bp | GGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAAGAGTaGGGGTCACGCTGCAAAGGACAGGAGACAGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GQCLWEGGVGKE*GSRCKGQETAG Trigger: CCCTGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGGCACTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR TCA 72 bp | GGCTCATGGCTCAACCTCTGCATGAGCCTCTTGGTCTaGCTGTACCAGGGAATGGCTGTCTGCCCCCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GSWLNLCMSLLV*LYQGMAVCPQG Trigger: CCCCTGGGGGCAGACAGCCATTCCCTGGTACAGTCAGACCAAGAGGCTCATGCAGAGGTTGAGCCATGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR CCA 72 bp | AGCAGGCAGGCAGGCAGGCAGGCAGGCAGAGTGGGCTaGCTTCCATCTGACAGCCAGCTTTTCCACATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SRQAGRQAGRVG*LPSDSQLFHIV Trigger: CACTATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTGCCTGCCTGCCTGCCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR GCA 72 bp | TGGCCTGACACCACCCAGTTCCCTCAGAAGAGAACCTaGCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: WPDTTQFPQKRT*PKAWPVPVGRR Trigger: CCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGTCAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR CCA 72 bp | TTCCCCCTCCCCCAGCTCTCGGTTCAGAGCCTCTTCTaGCTCACTTGGCAGGCTCTGCTGGTCCAAATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FPLPQLSVQSLF*LTWQALLVQIF Trigger: GAAGATTTGGACCAGCAGAGCCTGCCAAGTGAGCCAGAAGAGGCTCTGAACCGAGAGCTGGGGGAGGGGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR CCA 72 bp | AGGTTCAAGGCGACAGTGACCCAAGCACAGCACTGCTaGCCTGACACCACCCAGTTCCCTCAGAAGAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: RFKATVTQAQHC*PDTTQFPQKRT Trigger: GGTTCTCTTCTGAGGGAACTGGGTGGTGTCAGGCCAGCAGTGCTGTGCTTGGGTCACTGTCGCCTTGAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR GCA 72 bp | GCTTTCACTCTCTGTTTCCGCCAGTGGCTCATCTCCTaGTGGGGGTGCACTCTTCCCTTGGCGCTTTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AFTLCFRQWLIS*WGCTLPLALSL Trigger: AAGAGAAAGCGCCAAGGGAAGAGTGCACCCCCAGCAGGAGATGAGCCACTGGCGGAAACAGAGAGTGAAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR GCA 72 bp | CTTCACATCCACCACTGGAGAGAAGCCAGCCAACTCTaGCTCGCTTTCACTCTCTGTTTCCGCCAGTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LHIHHWREASQL*LAFTLCFRQWL Trigger: GAGCCACTGGCGGAAACAGAGAGTGAAAGCGAGGCAGAGTTGGCTGGCTTCTCTCCAGTGGTGGATGTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR CCA 72 bp | TTCACTCTCTGTTTCCGCCAGTGGCTCATCTCCTGCTaGGGGTGCACTCTTCCCTTGGCGCTTTCTCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: FTLCFRQWLISC*GCTLPLALSLV Trigger: GACAAGAGAAAGCGCCAAGGGAAGAGTGCACCCCCAGCAGGAGATGAGCCACTGGCGGAAACAGAGAGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACAAGAAACATCTGTCAGTaGTGGAGTGGTGGCCCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: WEGGVGKEWGSRCKGQETRNICQ*WSGGPR Trigger: TCTCGGGCCACCACTCCACAACTGACAGATGTTTCT...TGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR TCA 72 bp | AAGCCCAGCTCTGCATTCAGTTGCTCCAGCTCCCCCTaGTCCAGCAACTCAAAGTCCTCAGTTGTGAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: KPSSAFSCSSSP*SSNSKSSVVSA Trigger: GGCACTCACAACTGAGGACTTTGAGTTGCTGGATCAGGGGGAGCTGGAGCAACTGAATGCAGAGCTGGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR TCA 72 bp | GCTCATTCTGCCATGGCTCATGGCTCAACCTCTGCATaGGCCTCTTGGTCTGACTGTACCAGGGAATGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: AHSAMAHGSTSA*ASWSDCTREWL Trigger: CAGCCATTCCCTGGTACAGTCAGACCAAGAGGCTCATGCAGAGGTTGAGCCATGAGCCATGGCAGAATGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR GCA 72 bp | TCGCCTCCAAAAGAGAAGAGAACATGCCATCCTCAGTaGTGGCAAAGTGCTAGGGGACCCTGCTGTCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SPPKEKRTCHPQ*WQSARGPCCPA Trigger: TGCAGGACAGCAGGGTCCCCTAGCACTTTGCCAGCACTGAGGATGGCATGTTCTCTTCTCTTTTGGAGGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR CCA 72 bp | ACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTaGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TQFPQKRTCPKA*PVPVGRRSWQR Trigger: TCTTTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| 3UTR CCA 72 bp | TTCACTGGTGCACCAGGAGGGCATTTCACTCCATCTTaGGGGGACCCTGCCCCATTGAAGTGCGTATTCACA | + |
|
Preference number: 3 (lower is better) Translates to: FTGAPGGHFTPS*GDPAPLKCVFT Trigger: TGTGAATACGCACTTCAATGGGGCAGGGTCCCCCCAAGATGGAGTGAAATGCCCTCCTGGTGCACCAGTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTGCCATGGCTCATGGCTCAACCTCTGCATGAGCCTCTTGGTCTGACTGTAGGGGACCCTGCCCCATaGAAGTGCGTATTCACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ILPWLMAQPLHEPLGLTVGDPAP*KCVFTK Trigger: CTTTGTGAATACGCACTTCAATGGGGCAGGGTCCCC...TACAGTCAGACCAAGAGGCTCATGCAGAGGTTGAGCCATGAGCCATGGCAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR TCA 72 bp | CATCAGCTTCAGCTTTCATGCTGTAGTCCAGCTGCATaGGCAAGGGCTCCAGGCGAGTATACATCCTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: HQLQLSCCSPAA*ARAPGEYTSSG Trigger: TCCAGAGGATGTATACTCGCCTGGAGCCCTTGCTCATGCAGCTGGACTACAGCATGAAAGCTGAAGCTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR CCA 72 bp | CTGCTGGTCCAAATCTTCAGAAACATCTGTCAGTTGTaGAGTGGTGGCCCGAGATACAGAGAAACCGCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: LLVQIFRNICQL*SGGPRYRETAA Trigger: AGCGGCGGTTTCTCTGTATCTCGGGCCACCACTCCACAACTGACAGATGTTTCTGAAGATTTGGACCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAATCTTCAGAAACATCTGTCAGTTGTGGAGTGGTGGCCCGAGATACAGAGGGGTGCACTCTTCCCTaGGCGCTTTCTCTTGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: SKSSETSVSCGVVARDTEGCTLP*ALSLVM Trigger: CATGACAAGAGAAAGCGCCAAGGGAAGAGTGCACCC...CTCTGTATCTCGGGCCACCACTCCACAACTGACAGATGTTTCTGAAGATTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR CCA 72 bp | GGTCCAAATCTTCAGAAACATCTGTCAGTTGTGGAGTaGTGGCCCGAGATACAGAGAAACCGCCGCTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GPNLQKHLSVVE*WPEIQRNRRSL Trigger: TAGAGAGCGGCGGTTTCTCTGTATCTCGGGCCACCACTCCACAACTGACAGATGTTTCTGAAGATTTGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR CCA 72 bp | CCAAATCTTCAGAAACATCTGTCAGTTGTGGAGTGGTaGCCCGAGATACAGAGAAACCGCCGCTCTCTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PNLQKHLSVVEW*PEIQRNRRSLR Trigger: TCTTAGAGAGCGGCGGTTTCTCTGTATCTCGGGCCACCACTCCACAACTGACAGATGTTTCTGAAGATTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| 3UTR CCA 72 bp | TTCAGAGCCTCTTCTGGCTCACTTGGCAGGCTCTGCTaGTCCAAATCTTCAGAAACATCTGTCAGTTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FRASSGSLGRLC*SKSSETSVSCG Trigger: TCCACAACTGACAGATGTTTCTGAAGATTTGGACCAGCAGAGCCTGCCAAGTGAGCCAGAAGAGGCTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGCAGGCAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTTCCCACTGCCTCGGCTaGGGCCGCCTCCTCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QAGRQAGRVGWLPSDSQLSHCLG*GRLLLR Trigger: GCGGAGGAGGAGGCGGCCGCAGCCGAGGCAGTGGGA...AAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTGCCTGCCTGCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGGCAGGCAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTCACCGCCCCAGACGCTaGCAGCCCTCCAAGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QAGRQAGRVGWLPSDSQLHRPRR*QPSKGG Trigger: CCCTCCCTTGGAGGGCTGTCAGCGTCTGGGGCGGTG...AAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTGCCTGCCTGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186037.7 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGCAGGCAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTAACCAGCAGTCGCTGTaGGGCCGCCAGCACCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QAGRQAGRVGWLPSDSQLNQQSL*GRQHRL Trigger: GAGGCGGTGCTGGCGGCCGCACAGCGACTGCTGGTT...AAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTGCCTGCCTGCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTTTCCACATAGTGGTGCGGCTGGGCGCCTaGCCCCGCACCCTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QAGRVGWLPSDSQLFHIVVRLGA*PRTLTV Trigger: GACAGTGAGGGTGCGGGGTCAGGCGCCCAGCCGCAC...CACTATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | ACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGGTGCGGCTGGGCGCCTaGCCCCGCACCCTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TPPSSLRREPALKLGQCLVRLGA*PRTLTV Trigger: GACAGTGAGGGTGCGGGGTCAGGCGCCCAGCCGCAC...CAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGCAGGCAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTGCCGTGACCAGGCTGTaGAGCGGCTTCTCCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: QAGRQAGRVGWLPSDSQLAVTRL*SGFSQT Trigger: GGTTTGGGAGAAGCCGCTGCACAGCCTGGTCACGGC...AAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTGCCTGCCTGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | CTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGGGCACACTCAGCAGGTaGGGCTGGGCGCCTGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LWEGGVGKEWGSRCKGQEGTLSR*GWAPDP Trigger: GGGGTCAGGCGCCCAGCCGCACCTGCTGAGTGTGCC...CTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGGCACACTCAGCAGGTaGGGCTGGGCGCCTGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PVGRRSWQRVGVTLQRTGGTLSR*GWAPDP Trigger: GGGGTCAGGCGCCCAGCCGCACCTGCTGAGTGTGCC...TCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | ACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGCTCAGCAGGTGCGGCTaGGCGCCTGACCCCGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TTQFPQKRTCPKAWPVPVLSRCG*APDPAP Trigger: GGGTGCGGGGTCAGGCGCCCAGCCGCACCTGCTGAG...CACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | AAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAGTGCGGCTGGGCGCCTaGCCCCGCACCCTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KRTCPKAWPVPVGRRSWQVRLGA*PRTLTV Trigger: GACAGTGAGGGTGCGGGGTCAGGCGCCCAGCCGCAC...TTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | CACGCTGCAAAGGACAGGAGACAGCAGGGAAATAAAGCCAACGGGAGTGTGGGATCCCACTGCCTCGGCTaGGGCCGCCTCCTCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HAAKDRRQQGNKANGSVGSHCLG*GRLLLR Trigger: GCGGAGGAGGAGGCGGCCGCAGCCGAGGCAGTGGGA...TCCCACACTCCCGTTGGCTTTATTTCCCTGCTGTCTCCTGTCCTTTGCAGCGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGCAGGCAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTCAGTGGCTCATCTCCTaGTGGGGGTGCACTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QAGRQAGRVGWLPSDSQLQWLIS*WGCTLP Trigger: GGGAAGAGTGCACCCCCAGCAGGAGATGAGCCACTG...AAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTGCCTGCCTGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTTTCCACATAGTGCAGTGGCCTCACCCATaGCGAGGCTCAGCCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QAGRVGWLPSDSQLFHIVQWPHP*RGSAPG Trigger: GCCTGGGGCTGAGCCTCGGCATGGGTGAGGCCACTG...CACTATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | ACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGAACCAGCAGTCGCTGTaGGGCCGCCAGCACCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPPSSLRREPALKLGQCLNQQSL*GRQHRL Trigger: GAGGCGGTGCTGGCGGCCGCACAGCGACTGCTGGTT...CAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | AGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAAGGCACACTCAGCAGGTaGGGCTGGGCGCCTGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: REPALKLGQCLWEGGVGKGTLSR*GWAPDP Trigger: GGGGTCAGGCGCCCAGCCGCACCTGCTGAGTGTGCC...TTTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | CTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGCAGGGAATGGCTGTCTaGCCCCAGGGGAGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LWEGGVGKEWGSRCKGQEQGMAV*PQGRRR Trigger: CCTCCTCCTCCCCTGGGGGCAGACAGCCATTCCCTG...CTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | TCCACCACTGGAGAGAAGCCAGCCAACTCTGCCTCGCTTTCACTCTCTGTTTCCCAGTGGCCTCACCCATaGCGAGGCTCAGCCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STTGEKPANSASLSLSVSQWPHP*RGSAPG Trigger: GCCTGGGGCTGAGCCTCGGCATGGGTGAGGCCACTG...GGAAACAGAGAGTGAAAGCGAGGCAGAGTTGGCTGGCTTCTCTCCAGTGGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| CDS-3UTR GCA 90 bp | CTTCCATCTGACAGCCAGCTTTTCCACATAGTGCCTCTCCCCAGAGTGACAGGGCAGTGGCCTCACCCATaGCGAGGCTCAGCCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSDSQLFHIVPLPRVTGQWPHP*RGSAPG Trigger: GCCTGGGGCTGAGCCTCGGCATGGGTGAGGCCACTG...CCCTGTCACTCTGGGGAGAGGCACTATGTGGAAAAGCTGGCTGTCAGATGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | GAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACAGCACAGGGAATGGCTGTCTaGCCCCAGGGGAGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGGVGKEWGSRCKGQETAQGMAV*PQGRRR Trigger: CCTCCTCCTCCCCTGGGGGCAGACAGCCATTCCCTG...TGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGCAGGCAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTCTCTTCTGGCTCACTTaGCAGGCTCTGCTGGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QAGRQAGRVGWLPSDSQLLFWLT*QALLVQ Trigger: TTGGACCAGCAGAGCCTGCCAAGTGAGCCAGAAGAG...AAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTGCCTGCCTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGCAGGCAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTGTTCAGAGCCTCTTCTaGCTCACTTGGCAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGRQAGRVGWLPSDSQLVQSLF*LTWQAL Trigger: CAGAGCCTGCCAAGTGAGCCAGAAGAGGCTCTGAAC...AAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTGCCTGCCTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | GTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACCCCCGAGCGCAGAACTaGGCTGGATTCTGCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGRRSWQRVGVTLQRTGDPRAQN*AGFCLL Trigger: CAAGAGGCAGAATCCAGCTCAGTTCTGCGCTCGGGG...GTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACAGCCGTGACCAGGCTGTaGAGCGGCTTCTCCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: WEGGVGKEWGSRCKGQETAVTRL*SGFSQT Trigger: GGTTTGGGAGAAGCCGCTGCACAGCCTGGTCACGGC...TGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | AGTGCCTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACCAGTGGCTCATCTCCTaGTGGGGGTGCACTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SACGKEELAKSGGHAAKDQWLIS*WGCTLP Trigger: GGGAAGAGTGCACCCCCAGCAGGAGATGAGCCACTG...GTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGGCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | AGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAACAGGGAATGGCTGTCTaGCCCCAGGGGAGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: REPALKLGQCLWEGGVGKQGMAV*PQGRRR Trigger: CCTCCTCCTCCCCTGGGGGCAGACAGCCATTCCCTG...TTTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | AGGTTCTGTTCTTCTCCCCTAATACAGAAGGGAAGTCCCTCGCCTCCAAAAGAGCTCAGCAGGTGCGGCTaGGCGCCTGACCCCGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: RFCSSPLIQKGSPSPPKELSRCG*APDPAP Trigger: GGGTGCGGGGTCAGGCGCCCAGCCGCACCTGCTGAG...CTCTTTTGGAGGCGAGGGACTTCCCTTCTGTATTAGGGGAGAAGAACAGAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | ACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGCCCCGAGCGCAGAACTaGGCTGGATTCTGCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPPSSLRREPALKLGQCLPRAQN*AGFCLL Trigger: CAAGAGGCAGAATCCAGCTCAGTTCTGCGCTCGGGG...CAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACAGCAGCCCCGAGCGCAGAACTaGGCTGGATTCTGCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KEELAKSGGHAAKDRRQQPRAQN*AGFCLL Trigger: CAAGAGGCAGAATCCAGCTCAGTTCTGCGCTCGGGG...CTGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGGCAGGCAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTAGAGGCCTCCTCATCTaGCAGCTCAGAGTCTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QAGRQAGRVGWLPSDSQLRGLLI*QLRVCN Trigger: ATTACAGACTCTGAGCTGTCAGATGAGGAGGCCTCT...AAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTGCCTGCCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | CCTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAAAGGCAAAGTTGGGGTaGGAGGGTGCTGGATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVGRRSWQRVGVTLQRTGKAKLG*EGAGWS Trigger: GCTCCATCCAGCACCCTCTCACCCCAACTTTGCCTT...TCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACACTCTGTTTCCGCCAGTaGCTCATCTCCTGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WEGGVGKEWGSRCKGQETLCFRQ*LISCWG Trigger: CCCCCAGCAGGAGATGAGCCACTGGCGGAAACAGAG...TGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | ACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGGGTGAATCTGGAAGGTaGGCCAGCTCTCAGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPPSSLRREPALKLGQCLGESGR*ASSQPG Trigger: ACCTGGCTGAGAGCTGGCTCACCTTCCAGATTCACC...CAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTTTCCACATAGTGGTCCAAAGCTTGCTTTaGGAGGGCTGGAGGCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QAGRVGWLPSDSQLFHIVVQSLL*EGWRRT Trigger: AGTGCGCCTCCAGCCCTCTCAAAGCAAGCTTTGGAC...CACTATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | CAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGGTCCAAAGCTTGCTTTaGGAGGGCTGGAGGCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QFPQKRTCPKAWPVPVGRVQSLL*EGWRRT Trigger: AGTGCGCCTCCAGCCCTCTCAAAGCAAGCTTTGGAC...CCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACAGCAGTGCTCCAGCTCCCCCTaGTCCAGCAACTCAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KEELAKSGGHAAKDRRQQCSSSP*SSNSKS Trigger: GGACTTTGAGTTGCTGGATCAGGGGGAGCTGGAGCA...CTGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | AGGTTCTGTTCTTCTCCCCTAATACAGAAGGGAAGTCCCTCGCCTCCAAAAGAGAACCAGCAGTCGCTGTaGGGCCGCCAGCACCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RFCSSPLIQKGSPSPPKENQQSL*GRQHRL Trigger: GAGGCGGTGCTGGCGGCCGCACAGCGACTGCTGGTT...CTCTTTTGGAGGCGAGGGACTTCCCTTCTGTATTAGGGGAGAAGAACAGAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | ACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGCAAGGCTTCCTTGTCTaGAGCCCCCTCCTCTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPPSSLRREPALKLGQCLQGFLV*SPLLFG Trigger: ACCGAAGAGGAGGGGGCTGCAGACAAGGAAGCCTTG...CAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTTTCCACATAGTGCAAGGCTTCCTTGTCTaGAGCCCCCTCCTCTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QAGRVGWLPSDSQLFHIVQGFLV*SPLLFG Trigger: ACCGAAGAGGAGGGGGCTGCAGACAAGGAAGCCTTG...CACTATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGTCCTCAGTTGTGAGTaGCTCTTCCTCCTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVGRRSWQRVGVTLQRTGVLSCE*LFLLRS Trigger: GCTCCTGAGGAGGAAGAGGCACTCACAACTGAGGAC...TCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | AGTGCCTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACGTCCTCAGTTGTGAGTaGCTCTTCCTCCTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SACGKEELAKSGGHAAKDVLSCE*LFLLRS Trigger: GCTCCTGAGGAGGAAGAGGCACTCACAACTGAGGAC...GTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTTTCCACATAGTGTGGCTCATCTCCTGCTaGGGGTGCACTCTTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGRVGWLPSDSQLFHIVWLISC*GCTLPL Trigger: CAAGGGAAGAGTGCACCCCCAGCAGGAGATGAGCCA...CACTATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | ACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGCTCATCTCCTGCTaGGGGTGCACTCTTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPPSSLRREPALKLGQCLWLISC*GCTLPL Trigger: CAAGGGAAGAGTGCACCCCCAGCAGGAGATGAGCCA...CAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAACTCTGTTTCCGCCAGTaGCTCATCTCCTGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRTCPKAWPVPVGRRSWQLCFRQ*LISCWG Trigger: CCCCCAGCAGGAGATGAGCCACTGGCGGAAACAGAG...TTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | AGTGCCTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACGTTCAGAGCCTCTTCTaGCTCACTTGGCAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SACGKEELAKSGGHAAKDVQSLF*LTWQAL Trigger: CAGAGCCTGCCAAGTGAGCCAGAAGAGGCTCTGAAC...GTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACAGCAGACCACTCACTGCCTCTaGGCTCAGGGTCTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KEELAKSGGHAAKDRRQQTTHCL*AQGLHW Trigger: CCAGTGAAGACCCTGAGCCCAGAGGCAGTGAGTGGT...CTGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 |
||
| CDS-3UTR TCA 90 bp | CTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGTCAAAAGTGAGATGCTaGGCAGGAAGAAGGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LWEGGVGKEWGSRCKGQESKVRC*AGRRAG Trigger: TCCGGCCCTTCTTCCTGCTCAGCATCTCACTTTTGA...CTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | AGTGCCTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACTCAAAAGTGAGATGCTaGGCAGGAAGAAGGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SACGKEELAKSGGHAAKDSKVRC*AGRRAG Trigger: TCCGGCCCTTCTTCCTGCTCAGCATCTCACTTTTGA...GTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | AGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAATTCAGGGGGTGGTGCTaGAACGTCAGGGAGAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: REPALKLGQCLWEGGVGKFRGWC*NVREKA Trigger: CGCTTTCTCCCTGACGTTTCAGCACCACCCCCTGAA...TTTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | AAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAGGTGAATCTGGAAGGTaGGCCAGCTCTCAGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KRTCPKAWPVPVGRRSWQGESGR*ASSQPG Trigger: ACCTGGCTGAGAGCTGGCTCACCTTCCAGATTCACC...TTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | CTTCCATCTGACAGCCAGCTTTTCCACATAGTGCCTCTCCCCAGAGTGACAGGGTGCTCCAGCTCCCCCTaGTCCAGCAACTCAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSDSQLFHIVPLPRVTGCSSSP*SSNSKS Trigger: GGACTTTGAGTTGCTGGATCAGGGGGAGCTGGAGCA...CCCTGTCACTCTGGGGAGAGGCACTATGTGGAAAAGCTGGCTGTCAGATGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGATCTCAGCCAGGTATCTaGACAACTCGGGCACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PVGRRSWQRVGVTLQRTGSQPGI*TTRAHS Trigger: TGAGTGTGCCCGAGTTGTGCAGATACCTGGCTGAGA...TCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | CTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGTCTCAGCCAGGTATCTaGACAACTCGGGCACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWEGGVGKEWGSRCKGQESQPGI*TTRAHS Trigger: TGAGTGTGCCCGAGTTGTGCAGATACCTGGCTGAGA...CTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAATCTCCTGCTGGGGGTaGACTCTTCCCTTGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRTCPKAWPVPVGRRSWQISCWG*TLPLAL Trigger: AAGCGCCAAGGGAAGAGTGCACCCCCAGCAGGAGAT...TTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTTTCCACATAGTGGTCCTCAGTTGTGAGTaGCTCTTCCTCCTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QAGRVGWLPSDSQLFHIVVLSCE*LFLLRS Trigger: GCTCCTGAGGAGGAAGAGGCACTCACAACTGAGGAC...CACTATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | ACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGTCCCAAGCCCAGCTCTaGATTCAGTTGCTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TTQFPQKRTCPKAWPVPVSQAQL*IQLLQL Trigger: GAGCTGGAGCAACTGAATGCAGAGCTGGGCTTGGGA...CACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAATGGCTCATCTCCTGCTaGGGGTGCACTCTTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRTCPKAWPVPVGRRSWQWLISC*GCTLPL Trigger: CAAGGGAAGAGTGCACCCCCAGCAGGAGATGAGCCA...TTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGACTTCACATCCACCACTaGAGAGAAGCCAGCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PVGRRSWQRVGVTLQRTGLHIHH*REASQL Trigger: GAGTTGGCTGGCTTCTCTCCAGTGGTGGATGTGAAG...TCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | ACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGCTCTTCTGGCTCACTTaGCAGGCTCTGCTGGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TPPSSLRREPALKLGQCLLFWLT*QALLVQ Trigger: TTGGACCAGCAGAGCCTGCCAAGTGAGCCAGAAGAG...CAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | ACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGCATTTCACTCCATCTTaGGGGGACCCTGCCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: TPPSSLRREPALKLGQCLHFTPS*GDPAPL Trigger: CAATGGGGCAGGGTCCCCCCAAGATGGAGTGAAATG...CAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | GAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACAGCACATTTCACTCCATCTTaGGGGGACCCTGCCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: EGGVGKEWGSRCKGQETAHFTPS*GDPAPL Trigger: CAATGGGGCAGGGTCCCCCCAAGATGGAGTGAAATG...TGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTTTCCACATAGTGCATTTCACTCCATCTTaGGGGGACCCTGCCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGRVGWLPSDSQLFHIVHFTPS*GDPAPL Trigger: CAATGGGGCAGGGTCCCCCCAAGATGGAGTGAAATG...CACTATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | CACGCTGCAAAGGACAGGAGACAGCAGGGAAATAAAGCCAACGGGAGTGTGGGACTTTGGAGGCATCTCTaGTCCCAAGCCCAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HAAKDRRQQGNKANGSVGLWRHL*SQAQLC Trigger: GCAGAGCTGGGCTTGGGACCAGAGATGCCTCCAAAG...TCCCACACTCCCGTTGGCTTTATTTCCCTGCTGTCTCCTGTCCTTTGCAGCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | GAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACAGCATCAAAAGTGAGATGCTaGGCAGGAAGAAGGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGGVGKEWGSRCKGQETASKVRC*AGRRAG Trigger: TCCGGCCCTTCTTCCTGCTCAGCATCTCACTTTTGA...TGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACAGCAGAGAGGGGATGAGAGCTaGAGCAAGGCTTCCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEELAKSGGHAAKDRRQQRGDES*SKASLS Trigger: AGACAAGGAAGCCTTGCTTCAGCTCTCATCCCCTCT...CTGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | CTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGAAAGTGAAGAGGGGATaGGAGCTGAAGCAAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWEGGVGKEWGSRCKGQEKVKRG*ELKQGF Trigger: GAAGCCTTGCTTCAGCTCTCATCCCCTCTTCACTTT...CTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | ACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGGGGACCCTGCCCCATTaGAGTGCGTATTCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TPPSSLRREPALKLGQCLGTLPH*SAYSQS Trigger: ACTTTGTGAATACGCACTTCAATGGGGCAGGGTCCC...CAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | AAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACAGCAGGAAGCCAGCCAACTCTaGCTCGCTTTCACTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KEELAKSGGHAAKDRRQQEASQL*LAFTLC Trigger: ACAGAGAGTGAAAGCGAGGCAGAGTTGGCTGGCTTC...CTGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | GTGGGGGTCACGCTGCAAAGGACAGGAGACAGCAGGGAAATAAAGCCAACGGGAAACATCAGGGGGCTTTaGAGGCATCTCTGGTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGVTLQRTGDSREIKPTGNIRGL*RHLWSQ Trigger: TTGGGACCAGAGATGCCTCCAAAGCCCCCTGATGTT...TCCCGTTGGCTTTATTTCCCTGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | ACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGAACATCAGGGGGCTTTaGAGGCATCTCTGGTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TTQFPQKRTCPKAWPVPVNIRGL*RHLWSQ Trigger: TTGGGACCAGAGATGCCTCCAAAGCCCCCTGATGTT...CACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTTTCCACATAGTGAACATCAGGGGGCTTTaGAGGCATCTCTGGTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QAGRVGWLPSDSQLFHIVNIRGL*RHLWSQ Trigger: TTGGGACCAGAGATGCCTCCAAAGCCCCCTGATGTT...CACTATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | CTTCCATCTGACAGCCAGCTTTTCCACATAGTGCCTCTCCCCAGAGTGACAGGGTCAAAAGTGAGATGCTaGGCAGGAAGAAGGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSDSQLFHIVPLPRVTGSKVRC*AGRRAG Trigger: TCCGGCCCTTCTTCCTGCTCAGCATCTCACTTTTGA...CCCTGTCACTCTGGGGAGAGGCACTATGTGGAAAAGCTGGCTGTCAGATGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | ACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGAGAGGCCTCCTCATCTaGCAGCTCAGAGTCTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TTQFPQKRTCPKAWPVPVRGLLI*QLRVCN Trigger: ATTACAGACTCTGAGCTGTCAGATGAGGAGGCCTCT...CACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | CACGCTGCAAAGGACAGGAGACAGCAGGGAAATAAAGCCAACGGGAGTGTGGGAGGGACCCTGCCCCATTaGAGTGCGTATTCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HAAKDRRQQGNKANGSVGGTLPH*SAYSQS Trigger: ACTTTGTGAATACGCACTTCAATGGGGCAGGGTCCC...TCCCACACTCCCGTTGGCTTTATTTCCCTGCTGTCTCCTGTCCTTTGCAGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | CTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGGGGAGAAAGCGAGGATaGCAGAGATCCAGTAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LWEGGVGKEWGSRCKGQEGRKRG*QRSSRK Trigger: TTTTCTACTGGATCTCTGGCATCCTCGCTTTCTCCC...CTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGGGAGAAAGCGAGGATaGCAGAGATCCAGTAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PVGRRSWQRVGVTLQRTGGRKRG*QRSSRK Trigger: TTTTCTACTGGATCTCTGGCATCCTCGCTTTCTCCC...TCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | AGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAATCTCAGCCAGGTATCTaGACAACTCGGGCACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: REPALKLGQCLWEGGVGKSQPGI*TTRAHS Trigger: TGAGTGTGCCCGAGTTGTGCAGATACCTGGCTGAGA...TTTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCAGTTAACACCTACACAGATCTTACTATCCACTTTACACCCTAGCAGGCTCAGCAGGTGCGGCTaGGCGCCTGACCCCGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: FFQLTPTQILLSTLHPSRLSRCG*APDPAP Trigger: GGGTGCGGGGTCAGGCGCCCAGCCGCACCTGCTGAG...CCTGCTAGGGTGTAAAGTGGATAGTAAGATCTGTGTAGGTGTTAACTGGAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACAAGCGCAGAACTGAGCTaGATTCTGCCTCTTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: WEGGVGKEWGSRCKGQETSAELS*ILPLVL Trigger: CAGTACAAGAGGCAGAATCCAGCTCAGTTCTGCGCT...TGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | ACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGTCAGTTGTGGAGTGGTaGCCCGAGATACAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TTQFPQKRTCPKAWPVPVSVVEW*PEIQRN Trigger: GTTTCTCTGTATCTCGGGCCACCACTCCACAACTGA...CACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTTTCCACATAGTGTCAGTTGTGGAGTGGTaGCCCGAGATACAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QAGRVGWLPSDSQLFHIVSVVEW*PEIQRN Trigger: GTTTCTCTGTATCTCGGGCCACCACTCCACAACTGA...CACTATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | GAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACAGCATCAGTTGTGGAGTGGTaGCCCGAGATACAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EGGVGKEWGSRCKGQETASVVEW*PEIQRN Trigger: GTTTCTCTGTATCTCGGGCCACCACTCCACAACTGA...TGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | CTTCCATCTGACAGCCAGCTTTTCCACATAGTGCCTCTCCCCAGAGTGACAGGGTCAGCAAGGCAAAGTTaGGGTGAGAGGGTGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPSDSQLFHIVPLPRVTGSARQS*GERVLD Trigger: ATCCAGCACCCTCTCACCCCAACTTTGCCTTGCTGA...CCCTGTCACTCTGGGGAGAGGCACTATGTGGAAAAGCTGGCTGTCAGATGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 |
||
| CDS-3UTR TCA 90 bp | AAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAAGAGGCCTCCTCATCTaGCAGCTCAGAGTCTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: KRTCPKAWPVPVGRRSWQRGLLI*QLRVCN Trigger: ATTACAGACTCTGAGCTGTCAGATGAGGAGGCCTCT...TTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | ACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGGGGAGAAAGCGAGGATaGCAGAGATCCAGTAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TPPSSLRREPALKLGQCLGRKRG*QRSSRK Trigger: TTTTCTACTGGATCTCTGGCATCCTCGCTTTCTCCC...CAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | AGGTTCTGTTCTTCTCCCCTAATACAGAAGGGAAGTCCCTCGCCTCCAAAAGAGATCTCCTGCTGGGGGTaGACTCTTCCCTTGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RFCSSPLIQKGSPSPPKEISCWG*TLPLAL Trigger: AAGCGCCAAGGGAAGAGTGCACCCCCAGCAGGAGAT...CTCTTTTGGAGGCGAGGGACTTCCCTTCTGTATTAGGGGAGAAGAACAGAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | ACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGTCACTTGGCAGGCTCTaGTGGTCCAAATCTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TTQFPQKRTCPKAWPVPVSLGRL*WSKSSE Trigger: TTCTGAAGATTTGGACCAGCAGAGCCTGCCAAGTGA...CACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | GTGGGGGTCACGCTGCAAAGGACAGGAGACAGCAGGGAAATAAAGCCAACGGGACTCTTGTCATGTTTGTaGTGCAGGGCATCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VGVTLQRTGDSREIKPTGLLSCL*CRASAS Trigger: TGAAGCTGATGCCCTGCACCACAAACATGACAAGAG...TCCCGTTGGCTTTATTTCCCTGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | ACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGCTTGGCAGGCTCTGCTaGTCCAAATCTTCAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TPPSSLRREPALKLGQCLLGRLC*SKSSET Trigger: TGTTTCTGAAGATTTGGACCAGCAGAGCCTGCCAAG...CAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | CAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGCTTGGCAGGCTCTGCTaGTCCAAATCTTCAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: QFPQKRTCPKAWPVPVGRLGRLC*SKSSET Trigger: TGTTTCTGAAGATTTGGACCAGCAGAGCCTGCCAAG...CCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| 3UTR CAA 72 bp | GCTCTGCTGGTCCAAATCTTCAGAAACATCTGTCAGTaGTGGAGTGGTGGCCCGAGATACAGAGAAACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALLVQIFRNICQ*WSGGPRYRETA Trigger: GGCGGTTTCTCTGTATCTCGGGCCACCACTCCACAACTGACAGATGTTTCTGAAGATTTGGACCAGCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| CDS-3UTR TCA 90 bp | CTAATACAGAAGGGAAGTCCCTCGCCTCCAAAAGAGAAGAGAACATGCCATCCTAAGGCAAAGTTGGGGTaGGAGGGTGCTGGATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIQKGSPSPPKEKRTCHPKAKLG*EGAGWS Trigger: GCTCCATCCAGCACCCTCTCACCCCAACTTTGCCTT...AGGATGGCATGTTCTCTTCTCTTTTGGAGGCGAGGGACTTCCCTTCTGTATTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 |
||
| CDS-3UTR GCA 90 bp | CTTCCATCTGACAGCCAGCTTTTCCACATAGTGCCTCTCCCCAGAGTGACAGGGTCACTTGGCAGGCTCTaGTGGTCCAAATCTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPSDSQLFHIVPLPRVTGSLGRL*WSKSSE Trigger: TTCTGAAGATTTGGACCAGCAGAGCCTGCCAAGTGA...CCCTGTCACTCTGGGGAGAGGCACTATGTGGAAAAGCTGGCTGTCAGATGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | CACGCTGCAAAGGACAGGAGACAGCAGGGAAATAAAGCCAACGGGAGTGTGGGATCACTTGGCAGGCTCTaGTGGTCCAAATCTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HAAKDRRQQGNKANGSVGSLGRL*WSKSSE Trigger: TTCTGAAGATTTGGACCAGCAGAGCCTGCCAAGTGA...TCCCACACTCCCGTTGGCTTTATTTCCCTGCTGTCTCCTGTCCTTTGCAGCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | AGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAACTCTTGTCATGTTTGTaGTGCAGGGCATCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: REPALKLGQCLWEGGVGKLLSCL*CRASAS Trigger: TGAAGCTGATGCCCTGCACCACAAACATGACAAGAG...TTTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | CTTCCATCTGACAGCCAGCTTTTCCACATAGTGCCTCTCCCCAGAGTGACAGGGCTTGGCAGGCTCTGCTaGTCCAAATCTTCAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LPSDSQLFHIVPLPRVTGLGRLC*SKSSET Trigger: TGTTTCTGAAGATTTGGACCAGCAGAGCCTGCCAAG...CCCTGTCACTCTGGGGAGAGGCACTATGTGGAAAAGCTGGCTGTCAGATGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | AGTAGGTTCTGTTCTTCTCCCCTAATACAGAAGGGAAGTCCCTCGCCTCCAAAACTTTGGAGGCATCTCTaGTCCCAAGCCCAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRFCSSPLIQKGSPSPPKLWRHL*SQAQLC Trigger: GCAGAGCTGGGCTTGGGACCAGAGATGCCTCCAAAG...TTTTGGAGGCGAGGGACTTCCCTTCTGTATTAGGGGAGAAGAACAGAACCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | GAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGACACGAGGGTGGAGCACTCTGTTTCCGCCAGTaGCTCATCTCCTGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ENYKVPQLNNQVGHEGGALCFRQ*LISCWG Trigger: CCCCCAGCAGGAGATGAGCCACTGGCGGAAACAGAG...TGCTCCACCCTCGTGTCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | GTATTTACAGACATAAAACCAATCCTAGGCACAGGTACTATACCAGGTCCCAGGGGTGAATCTGGAAGGTaGGCCAGCTCTCAGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VFTDIKPILGTGTIPGPRGESGR*ASSQPG Trigger: ACCTGGCTGAGAGCTGGCTCACCTTCCAGATTCACC...CCTGGGACCTGGTATAGTACCTGTGCCTAGGATTGGTTTTATGTCTGTAAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | AGTAGGTTCTGTTCTTCTCCCCTAATACAGAAGGGAAGTCCCTCGCCTCCAAAAGGGACCCTGCCCCATTaGAGTGCGTATTCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRFCSSPLIQKGSPSPPKGTLPH*SAYSQS Trigger: ACTTTGTGAATACGCACTTCAATGGGGCAGGGTCCC...TTTTGGAGGCGAGGGACTTCCCTTCTGTATTAGGGGAGAAGAACAGAACCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR TCA 90 bp | GTATTTACAGACATAAAACCAATCCTAGGCACAGGTACTATACCAGGTCCCAGGTGCTCCAGCTCCCCCTaGTCCAGCAACTCAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFTDIKPILGTGTIPGPRCSSSP*SSNSKS Trigger: GGACTTTGAGTTGCTGGATCAGGGGGAGCTGGAGCA...CCTGGGACCTGGTATAGTACCTGTGCCTAGGATTGGTTTTATGTCTGTAAATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCAGTTAACACCTACACAGATCTTACTATCCACTTTACACCCTAGCAGGGCCGTGACCAGGCTGTaGAGCGGCTTCTCCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: FFQLTPTQILLSTLHPSRAVTRL*SGFSQT Trigger: GGTTTGGGAGAAGCCGCTGCACAGCCTGGTCACGGC...CCTGCTAGGGTGTAAAGTGGATAGTAAGATCTGTGTAGGTGTTAACTGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | ATTCTGCCATGGCTCATGGCTCAACCTCTGCATGAGCCTCTTGGTCTGACTGTAGGGAGAAAGCGAGGATaGCAGAGATCCAGTAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILPWLMAQPLHEPLGLTVGRKRG*QRSSRK Trigger: TTTTCTACTGGATCTCTGGCATCCTCGCTTTCTCCC...TACAGTCAGACCAAGAGGCTCATGCAGAGGTTGAGCCATGAGCCATGGCAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| CDS-3UTR GCA 90 bp | GTATTTACAGACATAAAACCAATCCTAGGCACAGGTACTATACCAGGTCCCAGGATCTCCTGCTGGGGGTaGACTCTTCCCTTGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFTDIKPILGTGTIPGPRISCWG*TLPLAL Trigger: AAGCGCCAAGGGAAGAGTGCACCCCCAGCAGGAGAT...CCTGGGACCTGGTATAGTACCTGTGCCTAGGATTGGTTTTATGTCTGTAAATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR GCA 90 bp | AGTAGGTTCTGTTCTTCTCCCCTAATACAGAAGGGAAGTCCCTCGCCTCCAAAAGAAGCCAGCCAACTCTaGCTCGCTTTCACTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRFCSSPLIQKGSPSPPKEASQL*LAFTLC Trigger: ACAGAGAGTGAAAGCGAGGCAGAGTTGGCTGGCTTC...TTTTGGAGGCGAGGGACTTCCCTTCTGTATTAGGGGAGAAGAACAGAACCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
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| CDS-3UTR CCA 90 bp | CTAATACAGAAGGGAAGTCCCTCGCCTCCAAAAGAGAAGAGAACATGCCATCCTCTTCACATCCACCACTaGAGAGAAGCCAGCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LIQKGSPSPPKEKRTCHPLHIHH*REASQL Trigger: GAGTTGGCTGGCTTCTCTCCAGTGGTGGATGTGAAG...AGGATGGCATGTTCTCTTCTCTTTTGGAGGCGAGGGACTTCCCTTCTGTATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | GTATTTACAGACATAAAACCAATCCTAGGCACAGGTACTATACCAGGTCCCAGGACCACTCACTGCCTCTaGGCTCAGGGTCTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFTDIKPILGTGTIPGPRTTHCL*AQGLHW Trigger: CCAGTGAAGACCCTGAGCCCAGAGGCAGTGAGTGGT...CCTGGGACCTGGTATAGTACCTGTGCCTAGGATTGGTTTTATGTCTGTAAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 |
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| CDS-3UTR CCA 90 bp | GAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGACACGAGGGTGGAGCACTTTGGAGGCATCTCTaGTCCCAAGCCCAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ENYKVPQLNNQVGHEGGALWRHL*SQAQLC Trigger: GCAGAGCTGGGCTTGGGACCAGAGATGCCTCCAAAG...TGCTCCACCCTCGTGTCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
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| CDS-3UTR TCA 90 bp | TTTTTCCAGTTAACACCTACACAGATCTTACTATCCACTTTACACCCTAGCAGGCCCCGAGCGCAGAACTaGGCTGGATTCTGCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FFQLTPTQILLSTLHPSRPRAQN*AGFCLL Trigger: CAAGAGGCAGAATCCAGCTCAGTTCTGCGCTCGGGG...CCTGCTAGGGTGTAAAGTGGATAGTAAGATCTGTGTAGGTGTTAACTGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| CDS-3UTR TCA 90 bp | CTAATACAGAAGGGAAGTCCCTCGCCTCCAAAAGAGAAGAGAACATGCCATCCTAAAGTGAAGAGGGGATaGGAGCTGAAGCAAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LIQKGSPSPPKEKRTCHPKVKRG*ELKQGF Trigger: GAAGCCTTGCTTCAGCTCTCATCCCCTCTTCACTTT...AGGATGGCATGTTCTCTTCTCTTTTGGAGGCGAGGGACTTCCCTTCTGTATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
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| CDS-3UTR GCA 90 bp | GTATTTACAGACATAAAACCAATCCTAGGCACAGGTACTATACCAGGTCCCAGGTCCCAAGCCCAGCTCTaGATTCAGTTGCTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VFTDIKPILGTGTIPGPRSQAQL*IQLLQL Trigger: GAGCTGGAGCAACTGAATGCAGAGCTGGGCTTGGGA...CCTGGGACCTGGTATAGTACCTGTGCCTAGGATTGGTTTTATGTCTGTAAATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
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| CDS-3UTR TCA 90 bp | TTCCAGTTAACACCTACACAGATCTTACTATCCACTTTACACCCTAGCAGGGAGAGAGGGGATGAGAGCTaGAGCAAGGCTTCCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FQLTPTQILLSTLHPSRERGDES*SKASLS Trigger: AGACAAGGAAGCCTTGCTTCAGCTCTCATCCCCTCT...CTCCCTGCTAGGGTGTAAAGTGGATAGTAAGATCTGTGTAGGTGTTAACTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
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| CDS-3UTR TCA 90 bp | GTATTTACAGACATAAAACCAATCCTAGGCACAGGTACTATACCAGGTCCCAGGAGAGGGGATGAGAGCTaGAGCAAGGCTTCCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFTDIKPILGTGTIPGPRRGDES*SKASLS Trigger: AGACAAGGAAGCCTTGCTTCAGCTCTCATCCCCTCT...CCTGGGACCTGGTATAGTACCTGTGCCTAGGATTGGTTTTATGTCTGTAAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
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| CDS-3UTR GCA 90 bp | GTATTTACAGACATAAAACCAATCCTAGGCACAGGTACTATACCAGGTCCCAGGGAAGCCAGCCAACTCTaGCTCGCTTTCACTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFTDIKPILGTGTIPGPREASQL*LAFTLC Trigger: ACAGAGAGTGAAAGCGAGGCAGAGTTGGCTGGCTTC...CCTGGGACCTGGTATAGTACCTGTGCCTAGGATTGGTTTTATGTCTGTAAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
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| CDS-3UTR CCA 90 bp | GAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGACACGAGGGTGGAGCATCAGCAAGGCAAAGTTaGGGTGAGAGGGTGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ENYKVPQLNNQVGHEGGASARQS*GERVLD Trigger: ATCCAGCACCCTCTCACCCCAACTTTGCCTTGCTGA...TGCTCCACCCTCGTGTCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 |
||
| CDS-3UTR TCA 90 bp | GTATTTACAGACATAAAACCAATCCTAGGCACAGGTACTATACCAGGTCCCAGGAAAGTGAAGAGGGGATaGGAGCTGAAGCAAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VFTDIKPILGTGTIPGPRKVKRG*ELKQGF Trigger: GAAGCCTTGCTTCAGCTCTCATCCCCTCTTCACTTT...CCTGGGACCTGGTATAGTACCTGTGCCTAGGATTGGTTTTATGTCTGTAAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
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| CDS-3UTR CCA 90 bp | TTCCAGTTAACACCTACACAGATCTTACTATCCACTTTACACCCTAGCAGGGAGAGCGCAGAACTGAGCTaGATTCTGCCTCTTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: FQLTPTQILLSTLHPSRESAELS*ILPLVL Trigger: CAGTACAAGAGGCAGAATCCAGCTCAGTTCTGCGCT...CTCCCTGCTAGGGTGTAAAGTGGATAGTAAGATCTGTGTAGGTGTTAACTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| CDS-3UTR CCA 90 bp | TTTTTCCAGTTAACACCTACACAGATCTTACTATCCACTTTACACCCTAGCAGGGTTCAGAGCCTCTTCTaGCTCACTTGGCAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFQLTPTQILLSTLHPSRVQSLF*LTWQAL Trigger: CAGAGCCTGCCAAGTGAGCCAGAAGAGGCTCTGAAC...CCTGCTAGGGTGTAAAGTGGATAGTAAGATCTGTGTAGGTGTTAACTGGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | GTATTTACAGACATAAAACCAATCCTAGGCACAGGTACTATACCAGGTCCCAGGCTCTTGTCATGTTTGTaGTGCAGGGCATCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFTDIKPILGTGTIPGPRLLSCL*CRASAS Trigger: TGAAGCTGATGCCCTGCACCACAAACATGACAAGAG...CCTGGGACCTGGTATAGTACCTGTGCCTAGGATTGGTTTTATGTCTGTAAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCAGTTAACACCTACACAGATCTTACTATCCACTTTACACCCTAGCAGGCTTCACATCCACCACTaGAGAGAAGCCAGCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: FFQLTPTQILLSTLHPSRLHIHH*REASQL Trigger: GAGTTGGCTGGCTTCTCTCCAGTGGTGGATGTGAAG...CCTGCTAGGGTGTAAAGTGGATAGTAAGATCTGTGTAGGTGTTAACTGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS GCA 90 bp | CGTGACCAGGCTGTGCAGCGGCTTCTCCCAAACCAGCAGTCGCTGTaGGGCCGCCAGCACCGCCTCCCAGCCGCGGAGCCGCAGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RDQAVQRLLPNQQSL*GRQHRLPAAEPQPQ Trigger: CTGTGGCTGCGGCTCCGCGGCTGGGAGGCGGTGCTGGCGGCCGCACAGCGACTGCTGGTTTGGGAGAAGCCGCTGCACAGCCTGGTCACG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000189650.7 ENSMUST00000190240.7 |
||
| CDS GCA 90 bp | AACAACCAGAAGAGGCCGTTGAGTGTGGCCGCCGTGACCAGGCTGTaGAGCGGCTTCTCCCAAACCAGCAGTCGCTGTGCGGCCGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NNQKRPLSVAAVTRL*SGFSQTSSRCAAAS Trigger: GCTGGCGGCCGCACAGCGACTGCTGGTTTGGGAGAAGCCGCTGCACAGCCTGGTCACGGCGGCCACACTCAACGGCCTCTTCTGGTTGTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000189650.7 ENSMUST00000190240.7 |
||
| CDS TCA 90 bp | GTATCTGCACAACTCGGGCACACTCAGCAGGTGCGGCTGGGCGCCTaGCCCCGCACCCTCACTGTCAGAGTGTGGTTCTTCAGGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSAQLGHTQQVRLGA*PRTLTVRVWFFRGW Trigger: CCACCCCCTGAAGAACCACACTCTGACAGTGAGGGTGCGGGGTCAGGCGCCCAGCCGCACCTGCTGAGTGTGCCCGAGTTGTGCAGATAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000187901.2 ENSMUST00000190240.7 |
||
| CDS GCA 90 bp | CAGCTCTCAGCCAGGTATCTGCACAACTCGGGCACACTCAGCAGGTaGGGCTGGGCGCCTGACCCCGCACCCTCACTGTCAGAGTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QLSARYLHNSGTLSR*GWAPDPAPSLSECG Trigger: ACCACACTCTGACAGTGAGGGTGCGGGGTCAGGCGCCCAGCCGCACCTGCTGAGTGTGCCCGAGTTGTGCAGATACCTGGCTGAGAGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGGCAGGCAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTAACCAGAAGAGGCCGTaGAGTGTGGCCGCCGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: QAGRQAGRVGWLPSDSQLNQKRP*SVAAVT Trigger: GGTCACGGCGGCCACACTCAACGGCCTCTTCTGGTT...AAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTGCCTGCCTGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS CCA 90 bp | TCAGCCAGGTATCTGCACAACTCGGGCACACTCAGCAGGTGCGGCTaGGCGCCTGACCCCGCACCCTCACTGTCAGAGTGTGGTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SARYLHNSGTLSRCG*APDPAPSLSECGSS Trigger: TGAAGAACCACACTCTGACAGTGAGGGTGCGGGGTCAGGCGCCCAGCCGCACCTGCTGAGTGTGCCCGAGTTGTGCAGATACCTGGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000187901.2 ENSMUST00000190240.7 |
||
| CDS TCA 90 bp | TCCTCAGTTGTGAGTGCCTCTTCCTCCTCAGGAGCAGCCAGGGGTTaGGGTGAGTCTGCCTCTGGGCTCAGGGTCTTCACTGGTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SSVVSASSSSGAARG*GESASGLRVFTGAP Trigger: TGGTGCACCAGTGAAGACCCTGAGCCCAGAGGCAGACTCACCTCAACCCCTGGCTGCTCCTGAGGAGGAAGAGGCACTCACAACTGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGGCAGGCAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTAGAAACATCTGTCAGTaGTGGAGTGGTGGCCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QAGRQAGRVGWLPSDSQLRNICQ*WSGGPR Trigger: TCTCGGGCCACCACTCCACAACTGACAGATGTTTCT...AAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTGCCTGCCTGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | AGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAAAACCAGAAGAGGCCGTaGAGTGTGGCCGCCGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: REPALKLGQCLWEGGVGKNQKRP*SVAAVT Trigger: GGTCACGGCGGCCACACTCAACGGCCTCTTCTGGTT...TTTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | GTGGGGGTCACGCTGCAAAGGACAGGAGACAGCAGGGAAATAAAGCCAACGGGAGAACATCAGGGGGCTTaGGAGGCATCTCTGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VGVTLQRTGDSREIKPTGEHQGA*EASLVP Trigger: TGGGACCAGAGATGCCTCCAAAGCCCCCTGATGTTC...TCCCGTTGGCTTTATTTCCCTGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
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| CDS-3UTR CAA 90 bp | GTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACCCTTGGCGCTTTCTCTaGTCATGTTTGTGGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VGRRSWQRVGVTLQRTGDPWRFL*SCLWCR Trigger: CCTGCACCACAAACATGACAAGAGAAAGCGCCAAGG...GTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
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| CDS-3UTR CAA 90 bp | CAGGCAGGCAGAGTGGGCTGGCTTCCATCTGACAGCCAGCTTTTCCACATAGTGGGGTGCACTCTTCCCTaGGCGCTTTCTCTTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: QAGRVGWLPSDSQLFHIVGCTLP*ALSLVM Trigger: CATGACAAGAGAAAGCGCCAAGGGAAGAGTGCACCC...CACTATGTGGAAAAGCTGGCTGTCAGATGGAAGCCAGCCCACTCTGCCTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
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| CDS-3UTR CAA 90 bp | AAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACAGCAGGGGTGCACTCTTCCCTaGGCGCTTTCTCTTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: KEELAKSGGHAAKDRRQQGCTLP*ALSLVM Trigger: CATGACAAGAGAAAGCGCCAAGGGAAGAGTGCACCC...CTGCTGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | CTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGAGAAACATCTGTCAGTaGTGGAGTGGTGGCCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LWEGGVGKEWGSRCKGQERNICQ*WSGGPR Trigger: TCTCGGGCCACCACTCCACAACTGACAGATGTTTCT...CTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | ACACCACCCAGTTCCCTCAGAAGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGGGGGACCCTGCCCCATaGAAGTGCGTATTCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TPPSSLRREPALKLGQCLGDPAP*KCVFTK Trigger: CTTTGTGAATACGCACTTCAATGGGGCAGGGTCCCC...CAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCTTCTGAGGGAACTGGGTGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGACAGGGGACCCTGCCCCATaGAAGTGCGTATTCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: WEGGVGKEWGSRCKGQETGDPAP*KCVFTK Trigger: CTTTGTGAATACGCACTTCAATGGGGCAGGGTCCCC...TGTCTCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | AGAGAACCTGCCCTAAAGCTTGGCCAGTGCCTGTGGGAAGGAGGAGTTGGCAAAGAACATCAGGGGGCTTaGGAGGCATCTCTGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: REPALKLGQCLWEGGVGKEHQGA*EASLVP Trigger: TGGGACCAGAGATGCCTCCAAAGCCCCCTGATGTTC...TTTGCCAACTCCTCCTTCCCACAGGCACTGGCCAAGCTTTAGGGCAGGTTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGGAAGGAGGAGTTGGCAAAGAGTGGGGGTCACGCTGCAAAGGACAGGAGTACTGCAACAGCTCTaGCAGGTGAATCTGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PVGRRSWQRVGVTLQRTGVLQQL*QVNLSE Trigger: CTCTGACAGATTCACCTGCAAGAGCTGTTGCAGTAC...TCCTGTCCTTTGCAGCGTGACCCCCACTCTTTGCCAACTCCTCCTTCCCACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| CDS TCA 90 bp | TCTGCCTCTTGTACTGCAACAGCTCTTGCAGGTGAATCTGGAAGGTaGGCCAGCTCTCAGCCAGGTATCTGCACAACTCGGGCACACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SASCTATALAGESGR*ASSQPGICTTRAHS Trigger: TGAGTGTGCCCGAGTTGTGCAGATACCTGGCTGAGAGCTGGCTCACCTTCCAGATTCACCTGCAAGAGCTGTTGCAGTACAAGAGGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS TCA 90 bp | GAGGATGCCAGAGATCCAGTAGAAAATAGGTCAAAAGTGAGATGCTaGGCAGGAAGAAGGGCCGGAGGGACGACGAAGACAACAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EDARDPVENRSKVRC*AGRRAGGTTKTTTQ Trigger: CTGGGTTGTTGTCTTCGTCGTCCCTCCGGCCCTTCTTCCTGCTCAGCATCTCACTTTTGACCTATTTTCTACTGGATCTCTGGCATCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186037.7 |
||
| CDS-3UTR CAA 90 bp | GAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGACACGAGGGTGGAGCAAACCAGAAGAGGCCGTaGAGTGTGGCCGCCGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: ENYKVPQLNNQVGHEGGANQKRP*SVAAVT Trigger: GGTCACGGCGGCCACACTCAACGGCCTCTTCTGGTT...TGCTCCACCCTCGTGTCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | AGGTTCTGTTCTTCTCCCCTAATACAGAAGGGAAGTCCCTCGCCTCCAAAAGAGGGGTGCACTCTTCCCTaGGCGCTTTCTCTTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: RFCSSPLIQKGSPSPPKEGCTLP*ALSLVM Trigger: CATGACAAGAGAAAGCGCCAAGGGAAGAGTGCACCC...CTCTTTTGGAGGCGAGGGACTTCCCTTCTGTATTAGGGGAGAAGAACAGAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | AGGTTCTGTTCTTCTCCCCTAATACAGAAGGGAAGTCCCTCGCCTCCAAAAGAGGGGGACCCTGCCCCATaGAAGTGCGTATTCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RFCSSPLIQKGSPSPPKEGDPAP*KCVFTK Trigger: CTTTGTGAATACGCACTTCAATGGGGCAGGGTCCCC...CTCTTTTGGAGGCGAGGGACTTCCCTTCTGTATTAGGGGAGAAGAACAGAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS TCA 90 bp | GAGGATGCCAGAGATCCAGTAGAAAATAGGTCAAAAGTGAGATGCTaGGCAGGAAGAAGGGCCGGAGGGACGACGAAGACAACAACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EDARDPVENRSKVRC*AGRRAGGTTKTTTR Trigger: TCTGGTTGTTGTCTTCGTCGTCCCTCCGGCCCTTCTTCCTGCTCAGCATCTCACTTTTGACCTATTTTCTACTGGATCTCTGGCATCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000189650.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | AGGTTCTGTTCTTCTCCCCTAATACAGAAGGGAAGTCCCTCGCCTCCAAAAGAGAGAAACATCTGTCAGTaGTGGAGTGGTGGCCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RFCSSPLIQKGSPSPPKERNICQ*WSGGPR Trigger: TCTCGGGCCACCACTCCACAACTGACAGATGTTTCT...CTCTTTTGGAGGCGAGGGACTTCCCTTCTGTATTAGGGGAGAAGAACAGAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS TCA 90 bp | GAGGATGCCAGAGATCCAGTAGAAAATAGGTCAAAAGTGAGATGCTaGGCAGGAAGAAGGGCCGGAGGGACGACGAAGACAACAACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: EDARDPVENRSKVRC*AGRRAGGTTKTTTL Trigger: TAAGGTTGTTGTCTTCGTCGTCCCTCCGGCCCTTCTTCCTGCTCAGCATCTCACTTTTGACCTATTTTCTACTGGATCTCTGGCATCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187901.2 |
||
| CDS-3UTR CAA 90 bp | AGTAGGTTCTGTTCTTCTCCCCTAATACAGAAGGGAAGTCCCTCGCCTCCAAAAGCTGGATTCTGCCTCTaGTACTGCAACAGCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRFCSSPLIQKGSPSPPKAGFCL*YCNSSC Trigger: GCAAGAGCTGTTGCAGTACAAGAGGCAGAATCCAGC...TTTTGGAGGCGAGGGACTTCCCTTCTGTATTAGGGGAGAAGAACAGAACCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | GAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGACACGAGGGTGGAGCATGTCCAAAGCTTGCTTaGAGAGGGCTGGAGGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ENYKVPQLNNQVGHEGGACPKLA*RGLEAH Trigger: GTGCGCCTCCAGCCCTCTCAAAGCAAGCTTTGGACA...TGCTCCACCCTCGTGTCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
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| CDS-3UTR CAA 90 bp | TTCCAGTTAACACCTACACAGATCTTACTATCCACTTTACACCCTAGCAGGGAGTGTCCAAAGCTTGCTTaGAGAGGGCTGGAGGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FQLTPTQILLSTLHPSRECPKLA*RGLEAH Trigger: GTGCGCCTCCAGCCCTCTCAAAGCAAGCTTTGGACA...CTCCCTGCTAGGGTGTAAAGTGGATAGTAAGATCTGTGTAGGTGTTAACTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | GTATTTACAGACATAAAACCAATCCTAGGCACAGGTACTATACCAGGTCCCAGGGCTGGATTCTGCCTCTaGTACTGCAACAGCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VFTDIKPILGTGTIPGPRAGFCL*YCNSSC Trigger: GCAAGAGCTGTTGCAGTACAAGAGGCAGAATCCAGC...CCTGGGACCTGGTATAGTACCTGTGCCTAGGATTGGTTTTATGTCTGTAAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
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| CDS-3UTR CAA 90 bp | GAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGACACGAGGGTGGAGCACCTTGGCGCTTTCTCTaGTCATGTTTGTGGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ENYKVPQLNNQVGHEGGAPWRFL*SCLWCR Trigger: CCTGCACCACAAACATGACAAGAGAAAGCGCCAAGG...TGCTCCACCCTCGTGTCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | GTATTTACAGACATAAAACCAATCCTAGGCACAGGTACTATACCAGGTCCCAGGCCTTGGCGCTTTCTCTaGTCATGTTTGTGGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VFTDIKPILGTGTIPGPRPWRFL*SCLWCR Trigger: CCTGCACCACAAACATGACAAGAGAAAGCGCCAAGG...CCTGGGACCTGGTATAGTACCTGTGCCTAGGATTGGTTTTATGTCTGTAAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS-3UTR CAA 90 bp | TTTTTCCAGTTAACACCTACACAGATCTTACTATCCACTTTACACCCTAGCAGGTGTCCAAAGCTTGCTTaGAGAGGGCTGGAGGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FFQLTPTQILLSTLHPSRCPKLA*RGLEAH Trigger: GTGCGCCTCCAGCCCTCTCAAAGCAAGCTTTGGACA...CCTGCTAGGGTGTAAAGTGGATAGTAAGATCTGTGTAGGTGTTAACTGGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
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| CDS GCA 72 bp | GCTGTGCAGCGGCTTCTCCCAAACCAGCAGTCGCTGTaGGGCCGCCAGCACCGCCTCCCAGCCGCGGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AVQRLLPNQQSL*GRQHRLPAAEP Trigger: CGGCTCCGCGGCTGGGAGGCGGTGCTGGCGGCCGCACAGCGACTGCTGGTTTGGGAGAAGCCGCTGCACAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000189650.7 ENSMUST00000190240.7 |
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| CDS TCA 72 bp | TGGGGCCACCTGGTGCAGGATCACCGCCCCAGACGCTaGCAGCCCTCCAAGGGAGGGAGCACCCGGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WGHLVQDHRPRR*QPSKGGSTRSS Trigger: GGAGGACCGGGTGCTCCCTCCCTTGGAGGGCTGTCAGCGTCTGGGGCGGTGATCCTGCACCAGGTGGCCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186037.7 |
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| CDS GCA 72 bp | GCCAGGTATCTGCACAACTCGGGCACACTCAGCAGGTaGGGCTGGGCGCCTGACCCCGCACCCTCACTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ARYLHNSGTLSR*GWAPDPAPSLS Trigger: TGACAGTGAGGGTGCGGGGTCAGGCGCCCAGCCGCACCTGCTGAGTGTGCCCGAGTTGTGCAGATACCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000187901.2 ENSMUST00000190240.7 |
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| CDS CAA 72 bp | CGGAGGGACGACGAAGACAACAACCAGAAGAGGCCGTaGAGTGTGGCCGCCGTGACCAGGCTGTGCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRDDEDNNQKRP*SVAAVTRLCSG Trigger: GCCGCTGCACAGCCTGGTCACGGCGGCCACACTCAACGGCCTCTTCTGGTTGTTGTCTTCGTCGTCCCTCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000188873.7 ENSMUST00000189650.7 ENSMUST00000190240.7 |
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| CDS CCA 72 bp | TATCTGCACAACTCGGGCACACTCAGCAGGTGCGGCTaGGCGCCTGACCCCGCACCCTCACTGTCAGAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: YLHNSGTLSRCG*APDPAPSLSEC Trigger: ACACTCTGACAGTGAGGGTGCGGGGTCAGGCGCCCAGCCGCACCTGCTGAGTGTGCCCGAGTTGTGCAGATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000187901.2 ENSMUST00000190240.7 |
||
| CDS GCA 72 bp | AGCACAGCACAGGCAGCGCAGCCCCGAGCGCAGAACTaGAGGGAAGAGCACAGGAGCAGTGAAGAACACAGG | + |
|
Preference number: 6 (lower is better) Translates to: STAQAAQPRAQN*REEHRSSEEHR Trigger: CCTGTGTTCTTCACTGCTCCTGTGCTCTTCCCTGCAGTTCTGCGCTCGGGGCTGCGCTGCCTGTGCTGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189650.7 |
||
| CDS TCA 72 bp | AGCACAGCACAGGCAGCGCAGCCCCGAGCGCAGAACTaGGCTGGATTCTGCCTCTTGTACTGCAACAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: STAQAAQPRAQN*AGFCLLYCNSS Trigger: AGAGCTGTTGCAGTACAAGAGGCAGAATCCAGCTCAGTTCTGCGCTCGGGGCTGCGCTGCCTGTGCTGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000188873.7 ENSMUST00000190240.7 |
||
| CDS TCA 72 bp | CCGAGCGCAGAACTGCAGGGAAGAGCACAGGAGCAGTaGAGAACACAGGCTTACACCATGTGCACAGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: PSAELQGRAQEQ*RTQAYTMCTVT Trigger: GGTGACTGTGCACATGGTGTAAGCCTGTGTTCTTCACTGCTCCTGTGCTCTTCCCTGCAGTTCTGCGCTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189650.7 |
||
| CDS TCA 72 bp | TGTACTGCAACAGCTCTTGCAGGTGAATCTGGAAGGTaGGCCAGCTCTCAGCCAGGTATCTGCACAACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: CTATALAGESGR*ASSQPGICTTR Trigger: CCGAGTTGTGCAGATACCTGGCTGAGAGCTGGCTCACCTTCCAGATTCACCTGCAAGAGCTGTTGCAGTACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS CAA 72 bp | CTGAGCTGGATTCTGCCTCTTGTACTGCAACAGCTCTaGCAGGTGAATCTGGAAGGTGAGCCAGCTCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSWILPLVLQQL*QVNLEGEPALS Trigger: GCTGAGAGCTGGCTCACCTTCCAGATTCACCTGCAAGAGCTGTTGCAGTACAAGAGGCAGAATCCAGCTCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS CAA 90 bp | AGCGCAGAACTGAGCTGGATTCTGCCTCTTGTACTGCAACAGCTCTaGCAGGTGAATCTGGAAGGTGAGCCAGCTCTCAGCCAGGTATCT | + |
|
Preference number: 6 (lower is better) Translates to: SAELSWILPLVLQQL*QVNLEGEPALSQVS Trigger: AGATACCTGGCTGAGAGCTGGCTCACCTTCCAGATTCACCTGCAAGAGCTGTTGCAGTACAAGAGGCAGAATCCAGCTCAGTTCTGCGCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097694.11 ENSMUST00000186037.7 ENSMUST00000190240.7 |
||
| CDS CAA 90 bp | GGGGAGAAACTGAGCTGGATTCTGCCTCTTGTACTGCAACAGCTCTaGCAGGTGAATCTGTCAGAGTGTGGTTCTTCAGGGGGTGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GEKLSWILPLVLQQL*QVNLSECGSSGGGA Trigger: AGCACCACCCCCTGAAGAACCACACTCTGACAGATTCACCTGCAAGAGCTGTTGCAGTACAAGAGGCAGAATCCAGCTCAGTTTCTCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189650.7 |
||
| CDS CAA 90 bp | AGCGCAGAACTGAGCTGGATTCTGCCTCTTGTACTGCAACAGCTCTaGCAGGTGAATCTGTCAGAGTGTGGTTCTTCAGGGGGTGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SAELSWILPLVLQQL*QVNLSECGSSGGGA Trigger: AGCACCACCCCCTGAAGAACCACACTCTGACAGATTCACCTGCAAGAGCTGTTGCAGTACAAGAGGCAGAATCCAGCTCAGTTCTGCGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188873.7 |
||
| CDS CAA 72 bp | CTGAGCTGGATTCTGCCTCTTGTACTGCAACAGCTCTaGCAGGTGAATCTGTCAGAGTGTGGTTCTTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSWILPLVLQQL*QVNLSECGSSG Trigger: CCCTGAAGAACCACACTCTGACAGATTCACCTGCAAGAGCTGTTGCAGTACAAGAGGCAGAATCCAGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000188873.7 ENSMUST00000189650.7 |
||