Pregenerated sensors for RETREG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022270Ensembl transcript IDs: ENSMUST00000022881.15, ENSMUST00000110438.3, ENSMUST00000226438.2, ENSMUST00000226750.2, ENSMUST00000227275.2, ENSMUST00000228306.2
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTCCTTTTGACATTAACATCTGTCAGGATTTGATGGACTGCTTCTaGGATGATAACGAAGGGGCTGCTGCAGCATGTGCTCACAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: SPFDINICQDLMDCF*DDNEGAAAACAHSC Trigger: ACAGCTGTGAGCACATGCTGCAGCAGCCCCTTCGTTATCATCTCAGAAGCAGTCCATCAAATCCTGACAGATGTTAATGTCAAAAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR GCA 90 bp | CAGTACCACCTCTTTTCAAGACTAGATGTGGCAGTCAGTGGAGCATaGCACTCGACAAGTAAGCCTATGTCTACAACTGTAGAAGTAACA | + |
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Preference number: 1 (lower is better) Translates to: QYHLFSRLDVAVSGA*HSTSKPMSTTVEVT Trigger: TGTTACTTCTACAGTTGTAGACATAGGCTTACTTGTCGAGTGGCATGCTCCACTGACTGCCACATCTAGTCTTGAAAAGAGGTGGTACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAAACATTGCAAGAGCATCACTAAGAGATACATAACTGCCTGCTTCCTGTGGTGGGTGGTTTATCTGTaGTTCGCTGGCTGCCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: CKHCKSITKRYITACFLWWVVYL*FAGCQV Trigger: CACCTGGCAGCCAGCGAAGCACAGATAAACCACCCA...CCACAGGAAGCAGGCAGTTATGTATCTCTTAGTGATGCTCTTGCAATGTTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR TCA 90 bp | AAACATTGCAAGAGCATCACTAAGAGATACATAACTGCCTGCTTCCTGTGGGTCTTGATGGACTGCTTCTaGGATGATAACGAAGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: KHCKSITKRYITACFLWVLMDCF*DDNEGA Trigger: AGCCCCTTCGTTATCATCTCAGAAGCAGTCCATCAA...GACCCACAGGAAGCAGGCAGTTATGTATCTCTTAGTGATGCTCTTGCAATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAAACATTGCAAGAGCATCACTAAGAGATACATAACTGCCTGCTTCCTGTGGTTGATGGACTGCTTCTaGGATGATAACGAAGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: CKHCKSITKRYITACFLWLMDCF*DDNEGA Trigger: AGCCCCTTCGTTATCATCTCAGAAGCAGTCCATCAA...CCACAGGAAGCAGGCAGTTATGTATCTCTTAGTGATGCTCTTGCAATGTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR GCA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAATGGGTGGTTTATCTGTaGTTCGCTGGCTGCCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: QTAPKHLGHHSMYICNYKWVVYL*FAGCQV Trigger: CACCTGGCAGCCAGCGAAGCACAGATAAACCACCCA...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| 3UTR-3UTR GCA 90 bp | ATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAATAGTTGGGTGGTTTATCTGTaGTTCGCTGGCTGCCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ITQYRNIGVCLHLSVQNSWVVYL*FAGCQV Trigger: CACCTGGCAGCCAGCGAAGCACAGATAAACCACCCA...ACTATTTTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGTGGGTGGTTTATCTGTaGTTCGCTGGCTGCCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: VSLSLSTDTHPTHYRREKWVVYL*FAGCQV Trigger: CACCTGGCAGCCAGCGAAGCACAGATAAACCACCCA...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGGTACCAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATAGGCTGCTGCAGCATGTaGTCACAGCTGTCACTTTTT | + |
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Preference number: 2 (lower is better) Translates to: IGTKMGKKMKAQAHFVSIGCCSM*SQLSLF Trigger: AAAAAGTGACAGCTGTGAGCACATGCTGCAGCAGCC...TATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTGGTACCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR GCA 90 bp | TTATTACCCCTTCCTTTGTCAGGGTCTTGCATGTCTGTGTGGAAATGCCAGCTATACCATTGCAAACATTaGAAGAGCATCACTAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LLPLPLSGSCMSVWKCQLYHCKH*KSITKR Trigger: TCTCTTAGTGATGCTCTTGCAATGTTTGCAATGGTA...TAGCTGGCATTTCCACACAGACATGCAAGACCCTGACAAAGGAAGGGGTAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR GCA 90 bp | TTATTACCCCTTCCTTTGTCAGGGTCTTGCATGTCTGTGTGGAAATGCCAGCTAGTGTGCAAAATAGTGTaGACTTACCATTGCAAACAT | + |
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Preference number: 2 (lower is better) Translates to: LLPLPLSGSCMSVWKCQLVCKIV*TYHCKH Trigger: ATGTTTGCAATGGTAAGTGCACACTATTTTGCACAC...TAGCTGGCATTTCCACACAGACATGCAAGACCCTGACAAAGGAAGGGGTAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR TCA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGTTCCCCCTGCTTGTTTaGACTTTTTGGGTGGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: VSLSLSTDTHPTHYRREKFPLLV*TFWVVY Trigger: ATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGAA...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| 3UTR-3UTR TCA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAATTCCCCCTGCTTGTTTaGACTTTTTGGGTGGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: QTAPKHLGHHSMYICNYKFPLLV*TFWVVY Trigger: ATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGAA...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATGTGTGCAAAATAGTGTaGACTTACCATTGCAAACAT | + |
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Preference number: 2 (lower is better) Translates to: QNGQENEGTGSLCINKGHVCKIV*TYHCKH Trigger: ATGTTTGCAATGGTAAGTGCACACTATTTTGCACAC...ATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR GCA 90 bp | ATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAATAGTTACCATTGCAAACATTaGAAGAGCATCACTAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ITQYRNIGVCLHLSVQNSYHCKH*KSITKR Trigger: TCTCTTAGTGATGCTCTTGCAATGTTTGCAATGGTA...ACTATTTTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR TCA 72 bp | GACATTAACATCTGTCAGGATTTGATGGACTGCTTCTaGGATGATAACGAAGGGGCTGCTGCAGCATGTGCT | + |
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Preference number: 3 (lower is better) Translates to: DINICQDLMDCF*DDNEGAAAACA Trigger: AGCACATGCTGCAGCAGCCCCTTCGTTATCATCTCAGAAGCAGTCCATCAAATCCTGACAGATGTTAATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR GCA 72 bp | CTCTTTTCAAGACTAGATGTGGCAGTCAGTGGAGCATaGCACTCGACAAGTAAGCCTATGTCTACAACTGTA | + |
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Preference number: 3 (lower is better) Translates to: LFSRLDVAVSGA*HSTSKPMSTTV Trigger: TACAGTTGTAGACATAGGCTTACTTGTCGAGTGGCATGCTCCACTGACTGCCACATCTAGTCTTGAAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR CAA 90 bp | TGGTCTAGATTCCCAGTAAGAAACGGATTACATATTGAGACTGCAGTGGCAGAGTTTCCCCCTGCTTGTTaGAACTTTTTGGGTGGTTTA | + |
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Preference number: 3 (lower is better) Translates to: WSRFPVRNGLHIETAVAEFPPAC*NFLGGL Trigger: TAAACCACCCAAAAAGTTCAAACAAGCAGGGGGAAA...CTCTGCCACTGCAGTCTCAATATGTAATCCGTTTCTTACTGGGAATCTAGACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR CAA 90 bp | TGGTCTAGATTCCCAGTAAGAAACGGATTACATATTGAGACTGCAGTGGCAGAGGGATACGTTCTCCTTTaGACATTAACATCTGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: WSRFPVRNGLHIETAVAEGYVLL*TLTSVR Trigger: CCTGACAGATGTTAATGTCAAAAGGAGAACGTATCC...CTCTGCCACTGCAGTCTCAATATGTAATCCGTTTCTTACTGGGAATCTAGACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR CAA 90 bp | GAGACGATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAATTTCCCCCTGCTTGTTaGAACTTTTTGGGTGGTTTA | + |
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Preference number: 3 (lower is better) Translates to: ETITQYRNIGVCLHLSVQFPPAC*NFLGGL Trigger: TAAACCACCCAAAAAGTTCAAACAAGCAGGGGGAAA...TTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTATCGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR CAA 90 bp | TTATTACCCCTTCCTTTGTCAGGGTCTTGCATGTCTGTGTGGAAATGCCAGCTAAAAGACCTTAATAGTTaGATGGGGGTTGGTGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: LLPLPLSGSCMSVWKCQLKDLNS*MGVGVF Trigger: AAAAACACCAACCCCCATCAAACTATTAAGGTCTTT...TAGCTGGCATTTCCACACAGACATGCAAGACCCTGACAAAGGAAGGGGTAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGCTGCAGCATGTGCTCACAGCTGTCACTTTTTAGCAAGTTATGATAAATCTGCTTGTTTGAACTTTTaGGGTGGTTTATCTGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: AAAACAHSCHFLASYDKSACLNF*GGLSVL Trigger: AAGCACAGATAAACCACCCAAAAAGTTCAAACAAGC...AGATTTATCATAACTTGCTAAAAAGTGACAGCTGTGAGCACATGCTGCAGCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR CAA 90 bp | TGCAAACATTGCAAGAGCATCACTAAGAGATACATAACTGCCTGCTTCCTGTGGAAAGACCTTAATAGTTaGATGGGGGTTGGTGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: CKHCKSITKRYITACFLWKDLNS*MGVGVF Trigger: AAAAACACCAACCCCCATCAAACTATTAAGGTCTTT...CCACAGGAAGCAGGCAGTTATGTATCTCTTAGTGATGCTCTTGCAATGTTTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATGCTTGTTTGAACTTTTaGGGTGGTTTATCTGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: QNGQENEGTGSLCINKGHACLNF*GGLSVL Trigger: AAGCACAGATAAACCACCCAAAAAGTTCAAACAAGC...ATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR CAA 90 bp | ATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAATAGTGGATACGTTCTCCTTTaGACATTAACATCTGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: ITQYRNIGVCLHLSVQNSGYVLL*TLTSVR Trigger: CCTGACAGATGTTAATGTCAAAAGGAGAACGTATCC...ACTATTTTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| 3UTR-3UTR CAA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAAGCTTGTTTGAACTTTTaGGGTGGTTTATCTGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: QTAPKHLGHHSMYICNYKACLNF*GGLSVL Trigger: AAGCACAGATAAACCACCCAAAAAGTTCAAACAAGC...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR TCA 90 bp | TCCCCCTGCTTGTTTGAACTTTTTGGGTGGTTTATCTGTGCTTCGCTGGCTGCCTGGGCGCCACCTGAGTaGGTGCCTGCCGGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SPCLFELFGWFICASLAAWAPPE*VPAGLL Trigger: AAGGAGCCCGGCAGGCACTCACTCAGGTGGCGCCCA...GGCAGCCAGCGAAGCACAGATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR TCA 90 bp | TTATTACCCCTTCCTTTGTCAGGGTCTTGCATGTCTGTGTGGAAATGCCAGCTATGGGCGCCACCTGAGTaGGTGCCTGCCGGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LLPLPLSGSCMSVWKCQLWAPPE*VPAGLL Trigger: AAGGAGCCCGGCAGGCACTCACTCAGGTGGCGCCCA...TAGCTGGCATTTCCACACAGACATGCAAGACCCTGACAAAGGAAGGGGTAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| CDS-3UTR CCA 90 bp | TTATTACCCCTTCCTTTGTCAGGGTCTTGCATGTCTGTGTGGAAATGCCAGCTAACCGTGACAGGCAGCTaGGCAGGAGCGCTGCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LLPLPLSGSCMSVWKCQLTVTGS*AGALPS Trigger: ACTGGGCAGCGCTCCTGCCCAGCTGCCTGTCACGGT...TAGCTGGCATTTCCACACAGACATGCAAGACCCTGACAAAGGAAGGGGTAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226438.2 |
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| CDS-3UTR TCA 90 bp | GAGACGATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAATGGGCGCCACCTGAGTaGGTGCCTGCCGGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: ETITQYRNIGVCLHLSVQWAPPE*VPAGLL Trigger: AAGGAGCCCGGCAGGCACTCACTCAGGTGGCGCCCA...TTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTATCGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| CDS-3UTR TCA 90 bp | TCCCCCTGCTTGTTTGAACTTTTTGGGTGGTTTATCTGTGCTTCGCTGGCTGCCCGGAGTGTACCCCTCTaGAAGGTTGAAGGTCCCATT | + |
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Preference number: 4 (lower is better) Translates to: SPCLFELFGWFICASLAARSVPL*KVEGPI Trigger: AATGGGACCTTCAACCTTTCAGAGGGGTACACTCCG...GGCAGCCAGCGAAGCACAGATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR TCA 90 bp | TCCCCCTGCTTGTTTGAACTTTTTGGGTGGTTTATCTGTGCTTCGCTGGCTGCCAGGTTGCTCATCAAGTaGAGGGCTTGGTCGCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SPCLFELFGWFICASLAARLLIK*RAWSLL Trigger: CAAGAGCGACCAAGCCCTTCACTTGATGAGCAACCT...GGCAGCCAGCGAAGCACAGATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR GCA 90 bp | TCCCCCTGCTTGTTTGAACTTTTTGGGTGGTTTATCTGTGCTTCGCTGGCTGCCCATCCCCAGCCAGGTTaGTCATCAAGTGAAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SPCLFELFGWFICASLAAHPQPG*SSSEGL Trigger: AAGCCCTTCACTTGATGAGCAACCTGGCTGGGGATG...GGCAGCCAGCGAAGCACAGATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR TCA 90 bp | ATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAATAGTTGGCACCCAGGAAGGTaGGCAGGCTGCGCAGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: ITQYRNIGVCLHLSVQNSWHPGR*AGCAAA Trigger: GGCCGCTGCGCAGCCTGCTCACCTTCCTGGGTGCCA...ACTATTTTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022881.15 |
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| CDS-3UTR TCA 90 bp | TCCCCCTGCTTGTTTGAACTTTTTGGGTGGTTTATCTGTGCTTCGCTGGCTGCCTCTTTGCTTGGTCTGTaGGCACTATCCAACTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SPCLFELFGWFICASLAASLLGL*ALSNCC Trigger: GCAGCAGTTGGATAGTGCTCACAGACCAAGCAAAGA...GGCAGCCAGCGAAGCACAGATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR TCA 90 bp | AAACATTGCAAGAGCATCACTAAGAGATACATAACTGCCTGCTTCCTGTGGGTCGGGCTTGGTCGCTCTTaGGAGGAAGTGAGAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KHCKSITKRYITACFLWVGLGRS*EEVRGQ Trigger: CTGGCCTCTCACTTCCTCTCAAGAGCGACCAAGCCC...GACCCACAGGAAGCAGGCAGTTATGTATCTCTTAGTGATGCTCTTGCAATGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| CDS-3UTR TCA 90 bp | TGCAAACATTGCAAGAGCATCACTAAGAGATACATAACTGCCTGCTTCCTGTGGGGGCTTGGTCGCTCTTaGGAGGAAGTGAGAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: CKHCKSITKRYITACFLWGLGRS*EEVRGQ Trigger: CTGGCCTCTCACTTCCTCTCAAGAGCGACCAAGCCC...CCACAGGAAGCAGGCAGTTATGTATCTCTTAGTGATGCTCTTGCAATGTTTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| CDS-3UTR TCA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTGGGCGCCACCTGAGTaGGTGCCTGCCGGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TLQTAPKHLGHHSMYICNWAPPE*VPAGLL Trigger: AAGGAGCCCGGCAGGCACTCACTCAGGTGGCGCCCA...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR GCA 90 bp | ATTGGTACCAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATACGCGCCCTCTGGCCCTaGTTCCTCTCCGGGAACTCC | + |
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Preference number: 4 (lower is better) Translates to: IGTKMGKKMKAQAHFVSIRALWP*FLSGNS Trigger: GGAGTTCCCGGAGAGGAAGCAGGGCCAGAGGGCGCG...TATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTGGTACCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022881.15 |
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| CDS-3UTR GCA 90 bp | TCCCCCTGCTTGTTTGAACTTTTTGGGTGGTTTATCTGTGCTTCGCTGGCTGCCTCCATGATTCTGCAATaGACTGGCTCAGTCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SPCLFELFGWFICASLAASMILQ*TGSVWL Trigger: GAGCCAGACTGAGCCAGTGCATTGCAGAATCATGGA...GGCAGCCAGCGAAGCACAGATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR TCA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGTGGGCGCCACCTGAGTaGGTGCCTGCCGGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSLSLSTDTHPTHYRREKWAPPE*VPAGLL Trigger: AAGGAGCCCGGCAGGCACTCACTCAGGTGGCGCCCA...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR GCA 90 bp | ATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAATAGTGCTCAGGAGCTCGTCTaGGCGCCAGCCCAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ITQYRNIGVCLHLSVQNSAQELV*APAQPQ Trigger: CTGTGGCTGGGCTGGCGCGCAGACGAGCTCCTGAGC...ACTATTTTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022881.15 |
||
| CDS-3UTR GCA 90 bp | TGGTCTAGATTCCCAGTAAGAAACGGATTACATATTGAGACTGCAGTGGCAGAGAGGCCAGCTGCCGACTaGCGTTCTTTGCTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WSRFPVRNGLHIETAVAERPAAD*RSLLGL Trigger: CAGACCAAGCAAAGAACGGCAGTCGGCAGCTGGCCT...CTCTGCCACTGCAGTCTCAATATGTAATCCGTTTCTTACTGGGAATCTAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTTCCCAGCTTCTGCCTaGTCCACAGCCGCCGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLQTAPKHLGHHSMYICNFPASA*STAAAC Trigger: GCAGGCGGCGGCTGTGGACCAGGCAGAAGCTGGGAA...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110438.3 ENSMUST00000227275.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCCTGCTTGTTTGAACTTTTTGGGTGGTTTATCTGTGCTTCGCTGGCTGCCGCTGAAATTCATCCATaGTTCTGCAATGCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPCLFELFGWFICASLAAAEIHP*FCNALA Trigger: AGCCAGTGCATTGCAGAATCATGGATGAATTTCAGC...GGCAGCCAGCGAAGCACAGATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCCTGCTTGTTTGAACTTTTTGGGTGGTTTATCTGTGCTTCGCTGGCTGCCATTGGAGAGGAAGCCTaGGGATTTCTTACTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPCLFELFGWFICASLAAIGEEA*GFLTLL Trigger: CAGCAAAGTAAGAAATCCTCAGGCTTCCTCTCCAAT...GGCAGCCAGCGAAGCACAGATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCCTGCTTGTTTGAACTTTTTGGGTGGTTTATCTGTGCTTCGCTGGCTGCCAAAATGTGCACACACTaGAGACCAGGAGGCAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SPCLFELFGWFICASLAAKMCTH*RPGGKT Trigger: AGTTTTGCCTCCTGGTCTGCAGTGTGTGCACATTTT...GGCAGCCAGCGAAGCACAGATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCCTGCTTGTTTGAACTTTTTGGGTGGTTTATCTGTGCTTCGCTGGCTGCCGCACTATCCAACTGCTaGTTCTTTCTCTTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPCLFELFGWFICASLAAALSNC*FFLLSS Trigger: AGAGCTCAAGAGAAAGAAGCAGCAGTTGGATAGTGC...GGCAGCCAGCGAAGCACAGATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CCA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAATTCCCAGCTTCTGCCTaGTCCACAGCCGCCGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTAPKHLGHHSMYICNYKFPASA*STAAAC Trigger: GCAGGCGGCGGCTGTGGACCAGGCAGAAGCTGGGAA...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110438.3 ENSMUST00000227275.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCTAGATTCCCAGTAAGAAACGGATTACATATTGAGACTGCAGTGGCAGAGACCCCTCTGAAAGGTTaGAGGTCCCATTGTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WSRFPVRNGLHIETAVAETPLKG*RSHCQS Trigger: GGACTGACAATGGGACCTTCAACCTTTCAGAGGGGT...CTCTGCCACTGCAGTCTCAATATGTAATCCGTTTCTTACTGGGAATCTAGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCTAGATTCCCAGTAAGAAACGGATTACATATTGAGACTGCAGTGGCAGAGAGGTTGCTCATCAAGTaGAGGGCTTGGTCGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WSRFPVRNGLHIETAVAERLLIK*RAWSLL Trigger: CAAGAGCGACCAAGCCCTTCACTTGATGAGCAACCT...CTCTGCCACTGCAGTCTCAATATGTAATCCGTTTCTTACTGGGAATCTAGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR GCA 90 bp | TGGTCTAGATTCCCAGTAAGAAACGGATTACATATTGAGACTGCAGTGGCAGAGCATCCCCAGCCAGGTTaGTCATCAAGTGAAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WSRFPVRNGLHIETAVAEHPQPG*SSSEGL Trigger: AAGCCCTTCACTTGATGAGCAACCTGGCTGGGGATG...CTCTGCCACTGCAGTCTCAATATGTAATCCGTTTCTTACTGGGAATCTAGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CCA 90 bp | GGAGACGATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAGGCCTCCAAGCAGATTaGAGAGGAAGCCTGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: GDDNTIQKHRGLLTSECAGLQAD*RGSLRI Trigger: AATCCTCAGGCTTCCTCTCCAATCTGCTTGGAGGCC...TGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTATCGTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CCA 90 bp | TGGTCTAGATTCCCAGTAAGAAACGGATTACATATTGAGACTGCAGTGGCAGAGGGCCTCCAAGCAGATTaGAGAGGAAGCCTGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: WSRFPVRNGLHIETAVAEGLQAD*RGSLRI Trigger: AATCCTCAGGCTTCCTCTCCAATCTGCTTGGAGGCC...CTCTGCCACTGCAGTCTCAATATGTAATCCGTTTCTTACTGGGAATCTAGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGCAGCATGTGCTCACAGCTGTCACTTTTTAGCAAGTTATGATAAATCTACCCCTCTGAAAGGTTaGAGGTCCCATTGTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAAACAHSCHFLASYDKSTPLKG*RSHCQS Trigger: GGACTGACAATGGGACCTTCAACCTTTCAGAGGGGT...AGATTTATCATAACTTGCTAAAAAGTGACAGCTGTGAGCACATGCTGCAGCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR TCA 90 bp | GAGACGATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAACCCCTCTGAAAGGTTaGAGGTCCCATTGTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETITQYRNIGVCLHLSVQTPLKG*RSHCQS Trigger: GGACTGACAATGGGACCTTCAACCTTTCAGAGGGGT...TTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTATCGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGCAGCATGTGCTCACAGCTGTCACTTTTTAGCAAGTTATGATAAATCTCGGAGTGTACCCCTCTaGAAGGTTGAAGGTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: AAAACAHSCHFLASYDKSRSVPL*KVEGPI Trigger: AATGGGACCTTCAACCTTTCAGAGGGGTACACTCCG...AGATTTATCATAACTTGCTAAAAAGTGACAGCTGTGAGCACATGCTGCAGCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR TCA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGGGGCTTGGTCGCTCTTaGGAGGAAGTGAGAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLSLSTDTHPTHYRREKGLGRS*EEVRGQ Trigger: CTGGCCTCTCACTTCCTCTCAAGAGCGACCAAGCCC...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR TCA 90 bp | ATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAATAGTGGGCTTGGTCGCTCTTaGGAGGAAGTGAGAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITQYRNIGVCLHLSVQNSGLGRS*EEVRGQ Trigger: CTGGCCTCTCACTTCCTCTCAAGAGCGACCAAGCCC...ACTATTTTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR GCA 90 bp | AAACATTGCAAGAGCATCACTAAGAGATACATAACTGCCTGCTTCCTGTGGGTCTCCATGATTCTGCAATaGACTGGCTCAGTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KHCKSITKRYITACFLWVSMILQ*TGSVWL Trigger: GAGCCAGACTGAGCCAGTGCATTGCAGAATCATGGA...GACCCACAGGAAGCAGGCAGTTATGTATCTCTTAGTGATGCTCTTGCAATGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR GCA 90 bp | GGAGACGATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAGAGGATTTCTTACTTTaGTGGGCTTCTGCCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GDDNTIQKHRGLLTSECAEDFLL*WASAPW Trigger: CCAAGGGGCAGAAGCCCAGCAAAGTAAGAAATCCTC...TGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTATCGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CCA 90 bp | ATTGGTACCAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATAAGGCTTCTCCACAGCTaGGCACCTCTTGTCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IGTKMGKKMKAQAHFVSIRLLHS*APLVLD Trigger: GTCCAGGACAAGAGGTGCCCAGCTGTGGAGAAGCCT...TATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTGGTACCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022881.15 |
||
| CDS-3UTR CCA 90 bp | GAGACGATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAATGCACTGGCTCAGTCTaGCTCTTTCATCTGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETITQYRNIGVCLHLSVQCTGSV*LFHLAW Trigger: CCAAGCCAGATGAAAGAGCCAGACTGAGCCAGTGCA...TTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTATCGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CCA 90 bp | GGAGACGATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAGAAAACTTCCTCACTaGGCCGGTCAAGATCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDDNTIQKHRGLLTSECARKLPH*AGQDRQ Trigger: CTGACGATCTTGACCGGCCCAGTGAGGAAGTTTTCT...TGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTATCGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CCA 90 bp | CAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCGGGCTCCTTCTAGCTaGTCTTTGATGGCAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QNGQENEGTGSLCINKGHRAPSS*SLMAAV Trigger: GACGGCTGCCATCAAAGACCAGCTAGAAGGAGCCCG...ATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACCGGGCTCCTTCTAGCTaGTCTTTGATGGCAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLQTAPKHLGHHSMYICNRAPSS*SLMAAV Trigger: GACGGCTGCCATCAAAGACCAGCTAGAAGGAGCCCG...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGCAGCATGTGCTCACAGCTGTCACTTTTTAGCAAGTTATGATAAATCTTCAGAAGTGTCTGTCTaGGGAGTGTACCCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AAAACAHSCHFLASYDKSSEVSV*GVYPSE Trigger: TTCAGAGGGGTACACTCCGCAGACAGACACTTCTGA...AGATTTATCATAACTTGCTAAAAAGTGACAGCTGTGAGCACATGCTGCAGCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR GCA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAAAGGCCAGCTGCCGACTaGCGTTCTTTGCTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTAPKHLGHHSMYICNYKRPAAD*RSLLGL Trigger: CAGACCAAGCAAAGAACGGCAGTCGGCAGCTGGCCT...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR GCA 90 bp | ATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAATAGTAGGCCAGCTGCCGACTaGCGTTCTTTGCTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ITQYRNIGVCLHLSVQNSRPAAD*RSLLGL Trigger: CAGACCAAGCAAAGAACGGCAGTCGGCAGCTGGCCT...ACTATTTTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGAGGCCAGCTGCCGACTaGCGTTCTTTGCTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSLSLSTDTHPTHYRREKRPAAD*RSLLGL Trigger: CAGACCAAGCAAAGAACGGCAGTCGGCAGCTGGCCT...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CCA 90 bp | GAGACGATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAGAAAACTTCCTCACTaGGCCGGTCAAGATCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETITQYRNIGVCLHLSVQRKLPH*AGQDRQ Trigger: CTGACGATCTTGACCGGCCCAGTGAGGAAGTTTTCT...TTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTATCGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CCA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAACGGGCTCCTTCTAGCTaGTCTTTGATGGCAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTAPKHLGHHSMYICNYKRAPSS*SLMAAV Trigger: GACGGCTGCCATCAAAGACCAGCTAGAAGGAGCCCG...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGCGGGCTCCTTCTAGCTaGTCTTTGATGGCAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSLSLSTDTHPTHYRREKRAPSS*SLMAAV Trigger: GACGGCTGCCATCAAAGACCAGCTAGAAGGAGCCCG...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CCA 90 bp | GGAGACGATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAGATTTCTTACTTTGCTaGGCTTCTGCCCCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GDDNTIQKHRGLLTSECADFLLC*ASAPWS Trigger: AGACCAAGGGGCAGAAGCCCAGCAAAGTAAGAAATC...TGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTATCGTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CCA 90 bp | TGGTCTAGATTCCCAGTAAGAAACGGATTACATATTGAGACTGCAGTGGCAGAGGATTTCTTACTTTGCTaGGCTTCTGCCCCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WSRFPVRNGLHIETAVAEDFLLC*ASAPWS Trigger: AGACCAAGGGGCAGAAGCCCAGCAAAGTAAGAAATC...CTCTGCCACTGCAGTCTCAATATGTAATCCGTTTCTTACTGGGAATCTAGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR TCA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACACCCCTCTGAAAGGTTaGAGGTCCCATTGTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLQTAPKHLGHHSMYICNTPLKG*RSHCQS Trigger: GGACTGACAATGGGACCTTCAACCTTTCAGAGGGGT...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR TCA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACCGGAGTGTACCCCTCTaGAAGGTTGAAGGTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TLQTAPKHLGHHSMYICNRSVPL*KVEGPI Trigger: AATGGGACCTTCAACCTTTCAGAGGGGTACACTCCG...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR TCA 90 bp | ATTGGTACCAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATAGCTGCTTCTTTCTCTTaGGCTCTGTGGGTAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IGTKMGKKMKAQAHFVSIAASFS*ALWVSP Trigger: TGGGCTTACCCACAGAGCTCAAGAGAAAGAAGCAGC...TATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTGGTACCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR TCA 90 bp | CAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATGCTGCTTCTTTCTCTTaGGCTCTGTGGGTAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QNGQENEGTGSLCINKGHAASFS*ALWVSP Trigger: TGGGCTTACCCACAGAGCTCAAGAGAAAGAAGCAGC...ATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR TCA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACAGGTTGCTCATCAAGTaGAGGGCTTGGTCGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLQTAPKHLGHHSMYICNRLLIK*RAWSLL Trigger: CAAGAGCGACCAAGCCCTTCACTTGATGAGCAACCT...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGCAGCATGTGCTCACAGCTGTCACTTTTTAGCAAGTTATGATAAATCTAGCTCACTCTCAATTTaGTCTAGCTCTGCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AAAACAHSCHFLASYDKSSSLSI*SSSAWS Trigger: TGACCAGGCAGAGCTAGATCAAATTGAGAGTGAGCT...AGATTTATCATAACTTGCTAAAAAGTGACAGCTGTGAGCACATGCTGCAGCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCTAGATTCCCAGTAAGAAACGGATTACATATTGAGACTGCAGTGGCAGAGATTGGAGAGGAAGCCTaGGGATTTCTTACTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WSRFPVRNGLHIETAVAEIGEEA*GFLTLL Trigger: CAGCAAAGTAAGAAATCCTCAGGCTTCCTCTCCAAT...CTCTGCCACTGCAGTCTCAATATGTAATCCGTTTCTTACTGGGAATCTAGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR TCA 90 bp | TGCAAACATTGCAAGAGCATCACTAAGAGATACATAACTGCCTGCTTCCTGTGGATTGGAGAGGAAGCCTaGGGATTTCTTACTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CKHCKSITKRYITACFLWIGEEA*GFLTLL Trigger: CAGCAAAGTAAGAAATCCTCAGGCTTCCTCTCCAAT...CCACAGGAAGCAGGCAGTTATGTATCTCTTAGTGATGCTCTTGCAATGTTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR GCA 90 bp | TGGTCTAGATTCCCAGTAAGAAACGGATTACATATTGAGACTGCAGTGGCAGAGGCACTATCCAACTGCTaGTTCTTTCTCTTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WSRFPVRNGLHIETAVAEALSNC*FFLLSS Trigger: AGAGCTCAAGAGAAAGAAGCAGCAGTTGGATAGTGC...CTCTGCCACTGCAGTCTCAATATGTAATCCGTTTCTTACTGGGAATCTAGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR GCA 90 bp | AAACATTGCAAGAGCATCACTAAGAGATACATAACTGCCTGCTTCCTGTGGGTCGCACTATCCAACTGCTaGTTCTTTCTCTTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KHCKSITKRYITACFLWVALSNC*FFLLSS Trigger: AGAGCTCAAGAGAAAGAAGCAGCAGTTGGATAGTGC...GACCCACAGGAAGCAGGCAGTTATGTATCTCTTAGTGATGCTCTTGCAATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACCATCCCCAGCCAGGTTaGTCATCAAGTGAAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLQTAPKHLGHHSMYICNHPQPG*SSSEGL Trigger: AAGCCCTTCACTTGATGAGCAACCTGGCTGGGGATG...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTGCACTGGCTCAGTCTaGCTCTTTCATCTGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLQTAPKHLGHHSMYICNCTGSV*LFHLAW Trigger: CCAAGCCAGATGAAAGAGCCAGACTGAGCCAGTGCA...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGCAGCATGTGCTCACAGCTGTCACTTTTTAGCAAGTTATGATAAATCTGATTCTGCAATGCACTaGCTCAGTCTGGCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AAAACAHSCHFLASYDKSDSAMH*LSLALS Trigger: TGAAAGAGCCAGACTGAGCCAGTGCATTGCAGAATC...AGATTTATCATAACTTGCTAAAAAGTGACAGCTGTGAGCACATGCTGCAGCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACGGCCTCCAAGCAGATTaGAGAGGAAGCCTGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TLQTAPKHLGHHSMYICNGLQAD*RGSLRI Trigger: AATCCTCAGGCTTCCTCTCCAATCTGCTTGGAGGCC...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR TCA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAACGGAGTGTACCCCTCTaGAAGGTTGAAGGTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QTAPKHLGHHSMYICNYKRSVPL*KVEGPI Trigger: AATGGGACCTTCAACCTTTCAGAGGGGTACACTCCG...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR TCA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAAGCTGCTTCTTTCTCTTaGGCTCTGTGGGTAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTAPKHLGHHSMYICNYKAASFS*ALWVSP Trigger: TGGGCTTACCCACAGAGCTCAAGAGAAAGAAGCAGC...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR TCA 90 bp | CAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATTCTTTGCTTGGTCTGTaGGCACTATCCAACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QNGQENEGTGSLCINKGHSLLGL*ALSNCC Trigger: GCAGCAGTTGGATAGTGCTCACAGACCAAGCAAAGA...ATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGCAGCATGTGCTCACAGCTGTCACTTTTTAGCAAGTTATGATAAATCTAAAATGTGCACACACTaGAGACCAGGAGGCAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: AAAACAHSCHFLASYDKSKMCTH*RPGGKT Trigger: AGTTTTGCCTCCTGGTCTGCAGTGTGTGCACATTTT...AGATTTATCATAACTTGCTAAAAAGTGACAGCTGTGAGCACATGCTGCAGCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTCAGAAGTGTCTGTCTaGGGAGTGTACCCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLQTAPKHLGHHSMYICNSEVSV*GVYPSE Trigger: TTCAGAGGGGTACACTCCGCAGACAGACACTTCTGA...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR GCA 90 bp | ATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAATAGTCATCCCCAGCCAGGTTaGTCATCAAGTGAAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ITQYRNIGVCLHLSVQNSHPQPG*SSSEGL Trigger: AAGCCCTTCACTTGATGAGCAACCTGGCTGGGGATG...ACTATTTTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGCATCCCCAGCCAGGTTaGTCATCAAGTGAAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSLSLSTDTHPTHYRREKHPQPG*SSSEGL Trigger: AAGCCCTTCACTTGATGAGCAACCTGGCTGGGGATG...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGTGCACTGGCTCAGTCTaGCTCTTTCATCTGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLSLSTDTHPTHYRREKCTGSV*LFHLAW Trigger: CCAAGCCAGATGAAAGAGCCAGACTGAGCCAGTGCA...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CCA 90 bp | CAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATAGAAAACTTCCTCACTaGGCCGGTCAAGATCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QNGQENEGTGSLCINKGHRKLPH*AGQDRQ Trigger: CTGACGATCTTGACCGGCCCAGTGAGGAAGTTTTCT...ATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACAGAAAACTTCCTCACTaGGCCGGTCAAGATCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLQTAPKHLGHHSMYICNRKLPH*AGQDRQ Trigger: CTGACGATCTTGACCGGCCCAGTGAGGAAGTTTTCT...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGGGCCTCCAAGCAGATTaGAGAGGAAGCCTGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VSLSLSTDTHPTHYRREKGLQAD*RGSLRI Trigger: AATCCTCAGGCTTCCTCTCCAATCTGCTTGGAGGCC...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CCA 90 bp | ATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAATAGTGGCCTCCAAGCAGATTaGAGAGGAAGCCTGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: ITQYRNIGVCLHLSVQNSGLQAD*RGSLRI Trigger: AATCCTCAGGCTTCCTCTCCAATCTGCTTGGAGGCC...ACTATTTTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR TCA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGTCTTTGCTTGGTCTGTaGGCACTATCCAACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSLSLSTDTHPTHYRREKSLLGL*ALSNCC Trigger: GCAGCAGTTGGATAGTGCTCACAGACCAAGCAAAGA...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR TCA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACAGCTCACTCTCAATTTaGTCTAGCTCTGCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLQTAPKHLGHHSMYICNSSLSI*SSSAWS Trigger: TGACCAGGCAGAGCTAGATCAAATTGAGAGTGAGCT...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR TCA 90 bp | ATTGGTACCAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATAAGCTCACTCTCAATTTaGTCTAGCTCTGCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IGTKMGKKMKAQAHFVSISSLSI*SSSAWS Trigger: TGACCAGGCAGAGCTAGATCAAATTGAGAGTGAGCT...TATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTGGTACCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR GCA 90 bp | ATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAATAGTTCAGAAGTGTCTGTCTaGGGAGTGTACCCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ITQYRNIGVCLHLSVQNSSEVSV*GVYPSE Trigger: TTCAGAGGGGTACACTCCGCAGACAGACACTTCTGA...ACTATTTTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR GCA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAATCAGAAGTGTCTGTCTaGGGAGTGTACCCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTAPKHLGHHSMYICNYKSEVSV*GVYPSE Trigger: TTCAGAGGGGTACACTCCGCAGACAGACACTTCTGA...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR GCA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAAGAGGATTTCTTACTTTaGTGGGCTTCTGCCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTAPKHLGHHSMYICNYKEDFLL*WASAPW Trigger: CCAAGGGGCAGAAGCCCAGCAAAGTAAGAAATCCTC...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGGAGGATTTCTTACTTTaGTGGGCTTCTGCCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLSLSTDTHPTHYRREKEDFLL*WASAPW Trigger: CCAAGGGGCAGAAGCCCAGCAAAGTAAGAAATCCTC...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR GCA 90 bp | ATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAATAGTGAGGATTTCTTACTTTaGTGGGCTTCTGCCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITQYRNIGVCLHLSVQNSEDFLL*WASAPW Trigger: CCAAGGGGCAGAAGCCCAGCAAAGTAAGAAATCCTC...ACTATTTTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGAGAAAACTTCCTCACTaGGCCGGTCAAGATCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLSLSTDTHPTHYRREKRKLPH*AGQDRQ Trigger: CTGACGATCTTGACCGGCCCAGTGAGGAAGTTTTCT...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACGATTTCTTACTTTGCTaGGCTTCTGCCCCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLQTAPKHLGHHSMYICNDFLLC*ASAPWS Trigger: AGACCAAGGGGCAGAAGCCCAGCAAAGTAAGAAATC...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CCA 90 bp | ATTGGTACCAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATAGATTTCTTACTTTGCTaGGCTTCTGCCCCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IGTKMGKKMKAQAHFVSIDFLLC*ASAPWS Trigger: AGACCAAGGGGCAGAAGCCCAGCAAAGTAAGAAATC...TATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTGGTACCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR TCA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAAATGACGGAAATGAGGTaGTACACTCTCCAAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTAPKHLGHHSMYICNYKMTEMR*YTLQGV Trigger: GACTCCTTGGAGAGTGTATCACCTCATTTCCGTCAT...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022881.15 |
||
| CDS-3UTR TCA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAAAGCTCACTCTCAATTTaGTCTAGCTCTGCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTAPKHLGHHSMYICNYKSSLSI*SSSAWS Trigger: TGACCAGGCAGAGCTAGATCAAATTGAGAGTGAGCT...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACGCACTATCCAACTGCTaGTTCTTTCTCTTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLQTAPKHLGHHSMYICNALSNC*FFLLSS Trigger: AGAGCTCAAGAGAAAGAAGCAGCAGTTGGATAGTGC...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR TCA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAAGCTGAAATTCATCCATaGTTCTGCAATGCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTAPKHLGHHSMYICNYKAEIHP*FCNALA Trigger: AGCCAGTGCATTGCAGAATCATGGATGAATTTCAGC...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR TCA 90 bp | ATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAATAGTGCTGAAATTCATCCATaGTTCTGCAATGCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITQYRNIGVCLHLSVQNSAEIHP*FCNALA Trigger: AGCCAGTGCATTGCAGAATCATGGATGAATTTCAGC...ACTATTTTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGAAAATGTGCACACACTaGAGACCAGGAGGCAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: VSLSLSTDTHPTHYRREKKMCTH*RPGGKT Trigger: AGTTTTGCCTCCTGGTCTGCAGTGTGTGCACATTTT...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR GCA 90 bp | ATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAATAGTGCACTATCCAACTGCTaGTTCTTTCTCTTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITQYRNIGVCLHLSVQNSALSNC*FFLLSS Trigger: AGAGCTCAAGAGAAAGAAGCAGCAGTTGGATAGTGC...ACTATTTTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| 3UTR CAA 72 bp | ACAGATTTCTATAGTCTTATATTATTACCCCTTCCTTaGTCAGGGTCTTGCATGTCTGTGTGGAAATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TDFYSLILLPLP*SGSCMSVWKCQ Trigger: CTGGCATTTCCACACAGACATGCAAGACCCTGACAAAGGAAGGGGTAATAATATAAGACTATAGAAATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGATTTCCTTGATGATCTaGATGATAACACGCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSLSLSTDTHPTHYRREKISLMI*MITRPR Trigger: TCTTGGGCGTGTTATCATGCAGATCATCAAGGAAAT...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022881.15 |
||
| CDS TCA 90 bp | TCCCCCTCCTCAGTGTCTGTGTCCTCTCCCGCAGTGGGCGCCACCTaGGTGAGTGCCTGCCGGGCTCCTTCTAGCTGGTCTTTGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPSSVSVSSPAVGAT*VSACRAPSSWSLMA Trigger: TGCCATCAAAGACCAGCTAGAAGGAGCCCGGCAGGCACTCACTCAGGTGGCGCCCACTGCGGGAGAGGACACAGACACTGAGGAGGGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS TCA 90 bp | GTCATGGCGGCTGTGATGACATCCCCAGCCAGGTTGCTCATCAAGTaGAGGGCTTGGTCGCTCTTGAGAGGAAGTGAGAGGCCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VMAAVMTSPARLLIK*RAWSLLRGSERPAA Trigger: GGCAGCTGGCCTCTCACTTCCTCTCAAGAGCGACCAAGCCCTTCACTTGATGAGCAACCTGGCTGGGGATGTCATCACAGCCGCCATGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS TCA 90 bp | CATCCCCAGCCAGGTTGCTCATCAAGTGAAGGGCTTGGTCGCTCTTaGGAGGAAGTGAGAGGCCAGCTGCCGACTGCCGTTCTTTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HPQPGCSSSEGLGRS*EEVRGQLPTAVLCL Trigger: CAAGCAAAGAACGGCAGTCGGCAGCTGGCCTCTCACTTCCTCTCAAGAGCGACCAAGCCCTTCACTTGATGAGCAACCTGGCTGGGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS TCA 90 bp | GGAAGTGAGAGGCCAGCTGCCGACTGCCGTTCTTTGCTTGGTCTGTaGGCACTATCCAACTGCTGCTTCTTTCTCTTGAGCTCTGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GSERPAADCRSLLGL*ALSNCCFFLLSSVG Trigger: ACCCACAGAGCTCAAGAGAAAGAAGCAGCAGTTGGATAGTGCTCACAGACCAAGCAAAGAACGGCAGTCGGCAGCTGGCCTCTCACTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS GCA 90 bp | TGGCCTCCAAGCAGATTGGAGAGGAAGCCTGAGGATTTCTTACTTTaGTGGGCTTCTGCCCCTTGGTCTTGTGTTAGTCCCAGCTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: WPPSRLERKPEDFLL*WASAPWSCVSPSSL Trigger: GAGTGAGCTGGGACTAACACAAGACCAAGGGGCAGAAGCCCAGCAAAGTAAGAAATCCTCAGGCTTCCTCTCCAATCTGCTTGGAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR CAA 90 bp | TCCCCCTGCTTGTTTGAACTTTTTGGGTGGTTTATCTGTGCTTCGCTGGCTGCCTGGCCTCCAAGCAGATaGGAGAGGAAGCCTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SPCLFELFGWFICASLAAWPPSR*ERKPED Trigger: ATCCTCAGGCTTCCTCTCCAATCTGCTTGGAGGCCA...GGCAGCCAGCGAAGCACAGATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS CCA 90 bp | CCTCCAAGCAGATTGGAGAGGAAGCCTGAGGATTTCTTACTTTGCTaGGCTTCTGCCCCTTGGTCTTGTGTTAGTCCCAGCTCACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PPSRLERKPEDFLLC*ASAPWSCVSPSSLS Trigger: TGAGAGTGAGCTGGGACTAACACAAGACCAAGGGGCAGAAGCCCAGCAAAGTAAGAAATCCTCAGGCTTCCTCTCCAATCTGCTTGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCTGCTTGTTTGAACTTTTTGGGTGGTTTATCTGTGCTTCGCTGGCTGCCTGCTGCTTCTTTCTCTaGAGCTCTGTGGGTAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPCLFELFGWFICASLAACCFFL*SSVGKP Trigger: GGGCTTACCCACAGAGCTCAAGAGAAAGAAGCAGCA...GGCAGCCAGCGAAGCACAGATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCTGCTTGTTTGAACTTTTTGGGTGGTTTATCTGTGCTTCGCTGGCTGCCTACCCCTCTGAAAGGTaGAAGGTCCCATTGTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPCLFELFGWFICASLAAYPSER*KVPLSV Trigger: GACTGACAATGGGACCTTCAACCTTTCAGAGGGGTA...GGCAGCCAGCGAAGCACAGATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR CAA 90 bp | TCCCCCTGCTTGTTTGAACTTTTTGGGTGGTTTATCTGTGCTTCGCTGGCTGCCACTGCCGTTCTTTGCTaGGTCTGTGAGCACTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPCLFELFGWFICASLAATAVLC*VCEHYP Trigger: TGGATAGTGCTCACAGACCAAGCAAAGAACGGCAGT...GGCAGCCAGCGAAGCACAGATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCTGCTTGTTTGAACTTTTTGGGTGGTTTATCTGTGCTTCGCTGGCTGCCAGGTTGAAGGTCCCATaGTCAGTCCAAGAGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPCLFELFGWFICASLAARLKVP*SVQETS Trigger: AGAAGTCTCTTGGACTGACAATGGGACCTTCAACCT...GGCAGCCAGCGAAGCACAGATAAACCACCCAAAAAGTTCAAACAAGCAGGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR CAA 90 bp | AAACATTGCAAGAGCATCACTAAGAGATACATAACTGCCTGCTTCCTGTGGGTCTGGCCTCCAAGCAGATaGGAGAGGAAGCCTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KHCKSITKRYITACFLWVWPPSR*ERKPED Trigger: ATCCTCAGGCTTCCTCTCCAATCTGCTTGGAGGCCA...GACCCACAGGAAGCAGGCAGTTATGTATCTCTTAGTGATGCTCTTGCAATGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| CDS-3UTR CAA 90 bp | GGAGACGATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCATGGCCTCCAAGCAGATaGGAGAGGAAGCCTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GDDNTIQKHRGLLTSECAWPPSR*ERKPED Trigger: ATCCTCAGGCTTCCTCTCCAATCTGCTTGGAGGCCA...TGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTATCGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| CDS TCA 90 bp | ATGATCTGCATGATAACACGCCCAAGAATCATGACGGAAATGAGGTaGTACACTCTCCAAGGAGTCAAGGCAAGGAACCAGAACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MICMITRPRIMTEMR*YTLQGVKARNQNSR Trigger: CCTGCTGTTCTGGTTCCTTGCCTTGACTCCTTGGAGAGTGTATCACCTCATTTCCGTCATGATTCTTGGGCGTGTTATCATGCAGATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022881.15 |
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| CDS-3UTR CAA 90 bp | GGAGACGATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCATGCTGCTTCTTTCTCTaGAGCTCTGTGGGTAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GDDNTIQKHRGLLTSECACCFFL*SSVGKP Trigger: GGGCTTACCCACAGAGCTCAAGAGAAAGAAGCAGCA...TGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTATCGTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| CDS-3UTR CAA 90 bp | TGGTCTAGATTCCCAGTAAGAAACGGATTACATATTGAGACTGCAGTGGCAGAGTGCTGCTTCTTTCTCTaGAGCTCTGTGGGTAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WSRFPVRNGLHIETAVAECCFFL*SSVGKP Trigger: GGGCTTACCCACAGAGCTCAAGAGAAAGAAGCAGCA...CTCTGCCACTGCAGTCTCAATATGTAATCCGTTTCTTACTGGGAATCTAGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| CDS-3UTR CAA 90 bp | GGAGACGATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAACCAGGAGGCAAAACTaGCCAGGACTCTGCTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GDDNTIQKHRGLLTSECATRRQN*PGLCCL Trigger: TAAACAGCAGAGTCCTGGCAAGTTTTGCCTCCTGGT...TGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTATCGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| CDS-3UTR CAA 90 bp | TTATTACCCCTTCCTTTGTCAGGGTCTTGCATGTCTGTGTGGAAATGCCAGCTAGACACAGATAACTCTTaGGCAGCAACTGTGAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LLPLPLSGSCMSVWKCQLDTDNS*AATVRL Trigger: TAGCCTCACAGTTGCTGCCAAAGAGTTATCTGTGTC...TAGCTGGCATTTCCACACAGACATGCAAGACCCTGACAAAGGAAGGGGTAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| CDS-3UTR CAA 90 bp | TGCAAACATTGCAAGAGCATCACTAAGAGATACATAACTGCCTGCTTCCTGTGGTACCCCTCTGAAAGGTaGAAGGTCCCATTGTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CKHCKSITKRYITACFLWYPSER*KVPLSV Trigger: GACTGACAATGGGACCTTCAACCTTTCAGAGGGGTA...CCACAGGAAGCAGGCAGTTATGTATCTCTTAGTGATGCTCTTGCAATGTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| CDS-3UTR CAA 90 bp | TGCAAACATTGCAAGAGCATCACTAAGAGATACATAACTGCCTGCTTCCTGTGGACTGCCGTTCTTTGCTaGGTCTGTGAGCACTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: CKHCKSITKRYITACFLWTAVLC*VCEHYP Trigger: TGGATAGTGCTCACAGACCAAGCAAAGAACGGCAGT...CCACAGGAAGCAGGCAGTTATGTATCTCTTAGTGATGCTCTTGCAATGTTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| CDS-3UTR CAA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACAGGGCTTGGTCGCTCTaGAGAGGAAGTGAGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TLQTAPKHLGHHSMYICNRAWSL*RGSERP Trigger: TGGCCTCTCACTTCCTCTCAAGAGCGACCAAGCCCT...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR CAA 90 bp | TTATTACCCCTTCCTTTGTCAGGGTCTTGCATGTCTGTGTGGAAATGCCAGCTATCATCTGGCTTGGAATaGATGACTTCCCAGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLPLPLSGSCMSVWKCQLSSGLE*MTSQLL Trigger: CAGAAGCTGGGAAGTCATCAATTCCAAGCCAGATGA...TAGCTGGCATTTCCACACAGACATGCAAGACCCTGACAAAGGAAGGGGTAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227275.2 |
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| CDS TCA 90 bp | CTTTGCTTGGTCTGTGAGCACTATCCAACTGCTGCTTCTTTCTCTTaGGCTCTGTGGGTAAGCCCAGGCTTAATTCATCTTCATCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: LCLVCEHYPTAASFS*ALWVSPGLIHLHHL Trigger: CAAATGATGAAGATGAATTAAGCCTGGGCTTACCCACAGAGCTCAAGAGAAAGAAGCAGCAGTTGGATAGTGCTCACAGACCAAGCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR CAA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGAACCAGAACAGCAGGTaGGCACCCAGGAAGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSLSLSTDTHPTHYRREKNQNSR*APRKVS Trigger: GCTCACCTTCCTGGGTGCCAACCTGCTGTTCTGGTT...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022881.15 |
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| CDS-3UTR CAA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGAGGGCTTGGTCGCTCTaGAGAGGAAGTGAGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VSLSLSTDTHPTHYRREKRAWSL*RGSERP Trigger: TGGCCTCTCACTTCCTCTCAAGAGCGACCAAGCCCT...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CAA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAAAGGGCTTGGTCGCTCTaGAGAGGAAGTGAGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QTAPKHLGHHSMYICNYKRAWSL*RGSERP Trigger: TGGCCTCTCACTTCCTCTCAAGAGCGACCAAGCCCT...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTGGCCTCCAAGCAGATaGGAGAGGAAGCCTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TLQTAPKHLGHHSMYICNWPPSR*ERKPED Trigger: ATCCTCAGGCTTCCTCTCCAATCTGCTTGGAGGCCA...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CAA 90 bp | TGGTCTAGATTCCCAGTAAGAAACGGATTACATATTGAGACTGCAGTGGCAGAGTCATCTGGCTTGGAATaGATGACTTCCCAGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WSRFPVRNGLHIETAVAESSGLE*MTSQLS Trigger: TGAAAGCTGGGAAGTCATCAATTCCAAGCCAGATGA...CTCTGCCACTGCAGTCTCAATATGTAATCCGTTTCTTACTGGGAATCTAGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022881.15 |
||
| CDS-3UTR CAA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTGCTGCTTCTTTCTCTaGAGCTCTGTGGGTAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TLQTAPKHLGHHSMYICNCCFFL*SSVGKP Trigger: GGGCTTACCCACAGAGCTCAAGAGAAAGAAGCAGCA...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACACCAGGAGGCAAAACTaGCCAGGACTCTGCTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: TLQTAPKHLGHHSMYICNTRRQN*PGLCCL Trigger: TAAACAGCAGAGTCCTGGCAAGTTTTGCCTCCTGGT...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CAA 90 bp | ATTGGTACCAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATATACCCCTCTGAAAGGTaGAAGGTCCCATTGTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: IGTKMGKKMKAQAHFVSIYPSER*KVPLSV Trigger: GACTGACAATGGGACCTTCAACCTTTCAGAGGGGTA...TATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTGGTACCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CAA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAATGCTGCTTCTTTCTCTaGAGCTCTGTGGGTAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QTAPKHLGHHSMYICNYKCCFFL*SSVGKP Trigger: GGGCTTACCCACAGAGCTCAAGAGAAAGAAGCAGCA...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CAA 90 bp | CAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATACTGCCGTTCTTTGCTaGGTCTGTGAGCACTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: QNGQENEGTGSLCINKGHTAVLC*VCEHYP Trigger: TGGATAGTGCTCACAGACCAAGCAAAGAACGGCAGT...ATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CAA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAAACAGCTGGGCACCTCTaGTCCTGGACAAAACCATTT | + |
|
Preference number: 5 (lower is better) Translates to: QTAPKHLGHHSMYICNYKTAGHL*SWTKPF Trigger: AAATGGTTTTGTCCAGGACAAGAGGTGCCCAGCTGT...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022881.15 |
||
| CDS-3UTR CAA 90 bp | CAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATGCTCTTTCATCTGGCTaGGAATTGATGACTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QNGQENEGTGSLCINKGHALSSG*ELMTSQ Trigger: CTGGGAAGTCATCAATTCCAAGCCAGATGAAAGAGC...ATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CAA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAAACCAGGAGGCAAAACTaGCCAGGACTCTGCTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: QTAPKHLGHHSMYICNYKTRRQN*PGLCCL Trigger: TAAACAGCAGAGTCCTGGCAAGTTTTGCCTCCTGGT...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
||
| CDS-3UTR CAA 90 bp | ATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAATAGTACCAGGAGGCAAAACTaGCCAGGACTCTGCTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ITQYRNIGVCLHLSVQNSTRRQN*PGLCCL Trigger: TAAACAGCAGAGTCCTGGCAAGTTTTGCCTCCTGGT...ACTATTTTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTACAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACGACACAGATAACTCTTaGGCAGCAACTGTGAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: TLQTAPKHLGHHSMYICNDTDNS*AATVRL Trigger: TAGCCTCACAGTTGCTGCCAAAGAGTTATCTGTGTC...GTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR CAA 90 bp | ATTGGTACCAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATAAGGTTGAAGGTCCCATaGTCAGTCCAAGAGACTTCT | + |
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Preference number: 5 (lower is better) Translates to: IGTKMGKKMKAQAHFVSIRLKVP*SVQETS Trigger: AGAAGTCTCTTGGACTGACAATGGGACCTTCAACCT...TATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTGGTACCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| CDS-3UTR CAA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAATACCCCTCTGAAAGGTaGAAGGTCCCATTGTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: QTAPKHLGHHSMYICNYKYPSER*KVPLSV Trigger: GACTGACAATGGGACCTTCAACCTTTCAGAGGGGTA...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR CAA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAAACTGCCGTTCTTTGCTaGGTCTGTGAGCACTATCCA | + |
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Preference number: 5 (lower is better) Translates to: QTAPKHLGHHSMYICNYKTAVLC*VCEHYP Trigger: TGGATAGTGCTCACAGACCAAGCAAAGAACGGCAGT...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR CAA 90 bp | CAAAATGGGCAAGAAAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATTCATCTGGCTTGGAATaGATGACTTCCCAGCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: QNGQENEGTGSLCINKGHSSGLE*MTSQLS Trigger: TGAGAGCTGGGAAGTCATCAATTCCAAGCCAGATGA...ATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTTTCTTGCCCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226438.2 |
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| CDS-3UTR CAA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGGCTCTTTCATCTGGCTaGGAATTGATGACTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: VSLSLSTDTHPTHYRREKALSSG*ELMTSQ Trigger: CTGGGAAGTCATCAATTCCAAGCCAGATGAAAGAGC...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR CAA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAAGACACAGATAACTCTTaGGCAGCAACTGTGAGGCTA | + |
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Preference number: 5 (lower is better) Translates to: QTAPKHLGHHSMYICNYKDTDNS*AATVRL Trigger: TAGCCTCACAGTTGCTGCCAAAGAGTTATCTGTGTC...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR CAA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGGACACAGATAACTCTTaGGCAGCAACTGTGAGGCTA | + |
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Preference number: 5 (lower is better) Translates to: VSLSLSTDTHPTHYRREKDTDNS*AATVRL Trigger: TAGCCTCACAGTTGCTGCCAAAGAGTTATCTGTGTC...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR CAA 90 bp | ATAACACAATACAGAAACATCGGGGTTTGCTTACATCTGAGTGTGCAAAATAGTAGGTTGAAGGTCCCATaGTCAGTCCAAGAGACTTCT | + |
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Preference number: 5 (lower is better) Translates to: ITQYRNIGVCLHLSVQNSRLKVP*SVQETS Trigger: AGAAGTCTCTTGGACTGACAATGGGACCTTCAACCT...ACTATTTTGCACACTCAGATGTAAGCAAACCCCGATGTTTCTGTATTGTGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022881.15 ENSMUST00000226438.2 ENSMUST00000227275.2 |
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| CDS-3UTR CAA 90 bp | CAAACAGCCCCTAAGCACTTAGGACACCACAGTATGTATATATGTAACTATAAAAGGTTGAAGGTCCCATaGTCAGTCCAAGAGACTTCT | + |
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Preference number: 5 (lower is better) Translates to: QTAPKHLGHHSMYICNYKRLKVP*SVQETS Trigger: AGAAGTCTCTTGGACTGACAATGGGACCTTCAACCT...TTTATAGTTACATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR CAA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGAGGTTGAAGGTCCCATaGTCAGTCCAAGAGACTTCT | + |
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Preference number: 5 (lower is better) Translates to: VSLSLSTDTHPTHYRREKRLKVP*SVQETS Trigger: AGAAGTCTCTTGGACTGACAATGGGACCTTCAACCT...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS-3UTR CAA 90 bp | GTCAGTCTATCATTATCAACTGATACACATCCAACTCACTATAGAAGGGAAAAGTCATCTGGCTTGGAATaGATGACTTCCCAGCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: VSLSLSTDTHPTHYRREKSSGLE*MTSQLL Trigger: CAGAAGCTGGGAAGTCATCAATTCCAAGCCAGATGA...CTTTTCCCTTCTATAGTGAGTTGGATGTGTATCAGTTGATAATGATAGACTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110438.3 ENSMUST00000227275.2 |
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| CDS CAA 72 bp | AGGCCGCGGCGGCTGCTCCTCGGTAGCCGGGCATCCTaGTGTGGCGTGCTCCTCGGGCGCCGGGCTCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: RPRRLLLGSRAS*CGVLLGRRARH Trigger: ATGGCGAGCCCGGCGCCCGAGGAGCACGCCACACAAGGATGCCCGGCTACCGAGGAGCAGCCGCCGCGGCCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022881.15 |
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| CDS TCA 72 bp | TCAGTGTCTGTGTCCTCTCCCGCAGTGGGCGCCACCTaGGTGAGTGCCTGCCGGGCTCCTTCTAGCTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SVSVSSPAVGAT*VSACRAPSSWS Trigger: AGACCAGCTAGAAGGAGCCCGGCAGGCACTCACTCAGGTGGCGCCCACTGCGGGAGAGGACACAGACACTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS TCA 72 bp | CATCAAGTGAAGGGCTTGGTCGCTCTTGAGAGGAAGTaGGAGGCCAGCTGCCGACTGCCGTTCTTTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: HQVKGLVALERK*EASCRLPFFAW Trigger: CCAAGCAAAGAACGGCAGTCGGCAGCTGGCCTCTCACTTCCTCTCAAGAGCGACCAAGCCCTTCACTTGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS TCA 72 bp | GCTGTGATGACATCCCCAGCCAGGTTGCTCATCAAGTaGAGGGCTTGGTCGCTCTTGAGAGGAAGTGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: AVMTSPARLLIK*RAWSLLRGSER Trigger: CCTCTCACTTCCTCTCAAGAGCGACCAAGCCCTTCACTTGATGAGCAACCTGGCTGGGGATGTCATCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS GCA 72 bp | TCACTGGGCCGGTCAAGATCGTCAGAAGTGTCTGTCTaGGGAGTGTACCCCTCTGAAAGGTTGAAGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SLGRSRSSEVSV*GVYPSERLKVP Trigger: TGGGACCTTCAACCTTTCAGAGGGGTACACTCCGCAGACAGACACTTCTGACGATCTTGACCGGCCCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS CAA 90 bp | CATGATTCTGCAATGCACTGGCTCAGTCTGGCTCTTTCATCTGGCTaGGAATTGATGACTTCCCAGCTTCTGCCTGGTCCACAGCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: HDSAMHWLSLALSSG*ELMTSQLLPGPQPP Trigger: CGGCGGCTGTGGACCAGGCAGAAGCTGGGAAGTCATCAATTCCAAGCCAGATGAAAGAGCCAGACTGAGCCAGTGCATTGCAGAATCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110438.3 ENSMUST00000226750.2 ENSMUST00000227275.2 |
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| CDS CAA 90 bp | TCTGCAATGCACTGGCTCAGTCTGGCTCTTTCATCTGGCTTGGAATaGATGACTTCCCAGCTCTCACTCCAGCACCGTGACAGGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SAMHWLSLALSSGLE*MTSQLSLQHRDRQL Trigger: CAGCTGCCTGTCACGGTGCTGGAGTGAGAGCTGGGAAGTCATCAATTCCAAGCCAGATGAAAGAGCCAGACTGAGCCAGTGCATTGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226438.2 |
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| CDS TCA 72 bp | AGGCCAGCTGCCGACTGCCGTTCTTTGCTTGGTCTGTaGGCACTATCCAACTGCTGCTTCTTTCTCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: RPAADCRSLLGL*ALSNCCFFLLS Trigger: GCTCAAGAGAAAGAAGCAGCAGTTGGATAGTGCTCACAGACCAAGCAAAGAACGGCAGTCGGCAGCTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS GCA 72 bp | AGCAGATTGGAGAGGAAGCCTGAGGATTTCTTACTTTaGTGGGCTTCTGCCCCTTGGTCTTGTGTTAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SRLERKPEDFLL*WASAPWSCVSP Trigger: GGGACTAACACAAGACCAAGGGGCAGAAGCCCAGCAAAGTAAGAAATCCTCAGGCTTCCTCTCCAATCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS CAA 72 bp | GAAGTGTCTGTCTGCGGAGTGTACCCCTCTGAAAGGTaGAAGGTCCCATTGTCAGTCCAAGAGACTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: EVSVCGVYPSER*KVPLSVQETSD Trigger: GTCAGAAGTCTCTTGGACTGACAATGGGACCTTCAACCTTTCAGAGGGGTACACTCCGCAGACAGACACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS CAA 90 bp | CATGATTCTGCAATGCACTGGCTCAGTCTGGCTCTTTCATCTGGCTaGGAATTGATGACTTCCCAGCTTTCAGTGAGGCTTCTCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: HDSAMHWLSLALSSG*ELMTSQLSVRLLHS Trigger: GCTGTGGAGAAGCCTCACTGAAAGCTGGGAAGTCATCAATTCCAAGCCAGATGAAAGAGCCAGACTGAGCCAGTGCATTGCAGAATCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022881.15 |
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| CDS CAA 90 bp | GTGTCTGTCTGCGGAGTGTACCCCTCTGAAAGGTTGAAGGTCCCATaGTCAGTCCAAGAGACTTCTGACACATCTGTGTCTGACACAGAT | + |
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Preference number: 6 (lower is better) Translates to: VSVCGVYPSERLKVP*SVQETSDTSVSDTD Trigger: ATCTGTGTCAGACACAGATGTGTCAGAAGTCTCTTGGACTGACAATGGGACCTTCAACCTTTCAGAGGGGTACACTCCGCAGACAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS TCA 72 bp | AAGTGTCTGTCTGCGGAGTGTACCCCTCTGAAAGGTTaGAGGTCCCATTGTCAGTCCAAGAGACTTCTGACA | + |
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Preference number: 6 (lower is better) Translates to: KCLSAECTPLKG*RSHCQSKRLLT Trigger: TGTCAGAAGTCTCTTGGACTGACAATGGGACCTTCAACCTTTCAGAGGGGTACACTCCGCAGACAGACACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS CAA 72 bp | TGCGGAGTGTACCCCTCTGAAAGGTTGAAGGTCCCATaGTCAGTCCAAGAGACTTCTGACACATCTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: CGVYPSERLKVP*SVQETSDTSVS Trigger: AGACACAGATGTGTCAGAAGTCTCTTGGACTGACAATGGGACCTTCAACCTTTCAGAGGGGTACACTCCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS CCA 72 bp | GAAAATCTGAAAGATCTCGAGAGAAAACTTCCTCACTaGGCCGGTCAAGATCGTCAGAAGTGTCTGTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: ENLKDLERKLPH*AGQDRQKCLSA Trigger: CGCAGACAGACACTTCTGACGATCTTGACCGGCCCAGTGAGGAAGTTTTCTCTCGAGATCTTTCAGATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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| CDS TCA 72 bp | ATGATAACACGCCCAAGAATCATGACGGAAATGAGGTaGTACACTCTCCAAGGAGTCAAGGCAAGGAACCAG | + |
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Preference number: 6 (lower is better) Translates to: MITRPRIMTEMR*YTLQGVKARNQ Trigger: CTGGTTCCTTGCCTTGACTCCTTGGAGAGTGTATCACCTCATTTCCGTCATGATTCTTGGGCGTGTTATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022881.15 |
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| CDS TCA 72 bp | AGACATTTCTTGAAGAAACATGCTGAAATTCATCCATaGTTCTGCAATGCACTGGCTCAGTCTGGCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: RHFLKKHAEIHP*FCNALAQSGSF Trigger: GAAAGAGCCAGACTGAGCCAGTGCATTGCAGAATCATGGATGAATTTCAGCATGTTTCTTCAAGAAATGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000022881.15 ENSMUST00000110438.3 ENSMUST00000226438.2 ENSMUST00000226750.2 ENSMUST00000227275.2 ENSMUST00000228306.2 |
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