Pregenerated sensors for REPS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019854Ensembl transcript IDs: ENSMUST00000126390.8, ENSMUST00000150029.8, ENSMUST00000154718.8, ENSMUST00000155284.8, ENSMUST00000155892.3, ENSMUST00000155959.8, ENSMUST00000164556.8, ENSMUST00000216413.2, ENSMUST00000216576.2
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTACTGGAGACACAGGTTCCTGCTGCTCTGCAGACGGACGAGGCTaGACCGCGTCATGGCTTCCAGGCCCCTTCTTGACTTGGCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: TTGDTGSCCSADGRG*TASWLPGPFLTWPL Trigger: CAGAGGCCAAGTCAAGAAGGGGCCTGGAAGCCATGACGCGGTTCAGCCTCGTCCGTCTGCAGAGCAGCAGGAACCTGTGTCTCCAGTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
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| 3UTR GCA 90 bp | GGACTGTCCAGACCACACCGCATCACCAGCAGAGGAGCCTGCTTGTaGATCACCAAAAGGAGACCAGAATGGCCCCGGTCCTGTAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: GLSRPHRITSRGACL*ITKRRPEWPRSCKR Trigger: CCTCTTACAGGACCGGGGCCATTCTGGTCTCCTTTTGGTGATGCACAAGCAGGCTCCTCTGCTGGTGATGCGGTGTGGTCTGGACAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
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| 3UTR CCA 90 bp | CGGCTGTGCTTCCTCCATGTGTGGGGAGAAGTTGGTGGGGACTGCTaGGGTGAAACTACTGGAGACACAGGTTCCTGCTGCTCTGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: RLCFLHVWGEVGGDC*GETTGDTGSCCSAD Trigger: GTCTGCAGAGCAGCAGGAACCTGTGTCTCCAGTAGTTTCACCCCAGCAGTCCCCACCAACTTCTCCCCACACATGGAGGAAGCACAGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
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| 3UTR TCA 90 bp | ATGCGGATGGGGACTGGATGCACAATAGCGGTATCCTCACTGCTCTaGTTCAGCTCTGGCCATGTCTGGTTCAGGGACGGCATCGACGGT | + |
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Preference number: 1 (lower is better) Translates to: MRMGTGCTIAVSSLL*FSSGHVWFRDGIDG Trigger: ACCGTCGATGCCGTCCCTGAACCAGACATGGCCAGAGCTGAATCAGAGCAGTGAGGATACCGCTATTGTGCATCCAGTCCCCATCCGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR CCA 90 bp | CTGGCTGCTCCCCCACATCTGCCGAATCTTCCAAGTCTATCAGCTTaGGCATCAGGCTTTCAGGGAGTTTCTCTGGTAGGTCATAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: LAAPPHLPNLPSLSA*ASGFQGVSLVGHSH Trigger: ATGGCTATGACCTACCAGAGAAACTCCCTGAAAGCCTGATGCCCAAGCTGATAGACTTGGAAGATTCGGCAGATGTGGGGGAGCAGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR TCA 90 bp | CTTTTCTTCAGCTTTACTGTCCGCTTGGGCAGCCCGAAGAGAGCTTaGGGGGTCAGAAGCTTTCTCAGCTGGCAAGACCTCAGGATGTTT | + |
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Preference number: 1 (lower is better) Translates to: LFFSFTVRLGSPKRA*GVRSFLSWQDLRMF Trigger: AAACATCCTGAGGTCTTGCCAGCTGAGAAAGCTTCTGACCCCTCAAGCTCTCTTCGGGCTGCCCAAGCGGACAGTAAAGCTGAAGAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR CCA 90 bp | AACCCTGAACTGCTTAAGAATGGGCACGTTCACAGTTCACGGCGATaGCTCAGAGGTGAGAAAACGGTCGGAGCTGCTCCAGTTGAACTT | + |
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Preference number: 1 (lower is better) Translates to: NPELLKNGHVHSSRR*LRGEKTVGAAPVEL Trigger: AAGTTCAACTGGAGCAGCTCCGACCGTTTTCTCACCTCTGAGCCATCGCCGTGAACTGTGAACGTGCCCATTCTTAAGCAGTTCAGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR CCA 90 bp | GCTGCTTGTTCTCTTCAGCTCCATTTCCTGCATGTGGATTTTGCTTaGAGTCATGCGGATGGGGACTGGATGCACAATAGCGGTATCCTC | + |
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Preference number: 1 (lower is better) Translates to: AACSLQLHFLHVDFA*SHADGDWMHNSGIL Trigger: GAGGATACCGCTATTGTGCATCCAGTCCCCATCCGCATGACTCCAAGCAAAATCCACATGCAGGAAATGGAGCTGAAGAGAACAAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR CCA 90 bp | GCAGGAACATTAGTAGCTGTCTTTTCTTCAGCTTTACTGTCCGCTTaGGCAGCCCGAAGAGAGCTTGAGGGGTCAGAAGCTTTCTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: AGTLVAVFSSALLSA*AARRELEGSEAFSA Trigger: AGCTGAGAAAGCTTCTGACCCCTCAAGCTCTCTTCGGGCTGCCCAAGCGGACAGTAAAGCTGAAGAAAAGACAGCTACTAATGTTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR TCA 90 bp | TACAGAATTAACACTCAAGACACCGTAAAGGAGACAGAGCATAGGTaGCGGAAATGGCAACCAGGTAGAAACGCACAGGGTCGTCCGGAC | + |
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Preference number: 1 (lower is better) Translates to: YRINTQDTVKETEHR*RKWQPGRNAQGRPD Trigger: GTCCGGACGACCCTGTGCGTTTCTACCTGGTTGCCATTTCCGTCACCTATGCTCTGTCTCCTTTACGGTGTCTTGAGTGTTAATTCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216576.2 |
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| 3UTR GCA 90 bp | GGCTGTGATGTTAGAACAGCAGCTAGGACGCCTGTCTTCTGCGTATaGTCATCCACATCTGGCCGTAACTCATCTTCTGACTTTAATCTT | + |
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Preference number: 1 (lower is better) Translates to: GCDVRTAARTPVFCV*SSTSGRNSSSDFNL Trigger: AAGATTAAAGTCAGAAGATGAGTTACGGCCAGATGTGGATGAGCATACGCAGAAGACAGGCGTCCTAGCTGCTGTTCTAACATCACAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR GCA 90 bp | ATAGAAGGCTGTGATGTTAGAACAGCAGCTAGGACGCCTGTCTTCTaGGTATGCTCATCCACATCTGGCCGTAACTCATCTTCTGACTTT | + |
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Preference number: 1 (lower is better) Translates to: IEGCDVRTAARTPVF*VCSSTSGRNSSSDF Trigger: AAAGTCAGAAGATGAGTTACGGCCAGATGTGGATGAGCATACGCAGAAGACAGGCGTCCTAGCTGCTGTTCTAACATCACAGCCTTCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR GCA 90 bp | CAGCCTGGCCAGAACCGTGTTGGTTTCCTTATTTCGTCTAATGGATaGCTGGATAGCCTTTTTATCTTTCCCCACAGATCTGGGAATAGA | + |
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Preference number: 1 (lower is better) Translates to: QPGQNRVGFLISSNG*LDSLFIFPHRSGNR Trigger: TCTATTCCCAGATCTGTGGGGAAAGATAAAAAGGCTATCCAGGCATCCATTAGACGAAATAAGGAAACCAACACGGTTCTGGCCAGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR CCA 90 bp | CTGGCCAGAACCGTGTTGGTTTCCTTATTTCGTCTAATGGATGCCTaGATAGCCTTTTTATCTTTCCCCACAGATCTGGGAATAGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: LARTVLVSLFRLMDA*IAFLSFPTDLGIEG Trigger: GCCTTCTATTCCCAGATCTGTGGGGAAAGATAAAAAGGCTATCCAGGCATCCATTAGACGAAATAAGGAAACCAACACGGTTCTGGCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR TCA 90 bp | CTTGTTCTTCGGAGACATTTGATGCAGCAAATACTTCAAATTGGCTaGAATCTGCAAAATTTGGTTGTTCTGGTATCTGCTGAGGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: LVLRRHLMQQILQIG*NLQNLVVLVSAEVR Trigger: CCTCACCTCAGCAGATACCAGAACAACCAAATTTTGCAGATTTCAGCCAATTTGAAGTATTTGCTGCATCAAATGTCTCCGAAGAACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR TCA 90 bp | CTCAGGATGTTTCTCAGCTTCACTGTCTTGTTCTTCGGAGACATTTaGTGCAGCAAATACTTCAAATTGGCTGAAATCTGCAAAATTTGG | + |
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Preference number: 1 (lower is better) Translates to: LRMFLSFTVLFFGDI*CSKYFKLAEICKIW Trigger: CCAAATTTTGCAGATTTCAGCCAATTTGAAGTATTTGCTGCATCAAATGTCTCCGAAGAACAAGACAGTGAAGCTGAGAAACATCCTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGGCGGGGACTGTCCAGACCACACCGCATCACCAGCAGAGGAGCCTGCTTGTCTGGGATGGCGGCTGTaGTTCCTCCATGTGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: GGGDCPDHTASPAEEPACLGWRL*FLHVWG Trigger: TCCCCACACATGGAGGAAGCACAGCCGCCATCCCAG...ACAAGCAGGCTCCTCTGCTGGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGCGGGGACTGTCCAGACCACACCGCATCACCAGCAGAGGAGCCTGCTTGTGGGAGACACAGGTTCCTaGTGCTCTGCAGACGGACGA | + |
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Preference number: 2 (lower is better) Translates to: EAGTVQTTPHHQQRSLLVGDTGS*CSADGR Trigger: TCGTCCGTCTGCAGAGCAGCAGGAACCTGTGTCTCC...CACAAGCAGGCTCCTCTGCTGGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGAGGCGGGGACTGTCCAGACCACACCGCATCACCAGCAGAGGAGCCTGCTGCTTCCTCCATGTGTaGGGAGAAGTTGGTGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: RWRRGLSRPHRITSRGACCFLHV*GEVGGD Trigger: GTCCCCACCAACTTCTCCCCACACATGGAGGAAGCA...GCAGGCTCCTCTGCTGGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTCCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
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| 3UTR CAA 90 bp | CTGGGCGATGGACAGAAGGACCGGGTGCCTGTGAGGGCTGAGGTCTaGGAGGCACTGCAGGAGGATGGGCAACAACTCCAGCCTGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: LGDGQKDRVPVRAEV*EALQEDGQQLQPVV Trigger: AACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGACCTCAGCCCTCACAGGCACCCGGTCCTTCTGTCCATCGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCTTGAGGTGGAGGCGGGGACTGTCCAGACCACACCGCATCACCAGCAGAGGGAAGTTGGTGGGGACTaGTGGGGTGAAACTACTGGA | + |
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Preference number: 2 (lower is better) Translates to: CLEVEAGTVQTTPHHQQREVGGD*WGETTG Trigger: TCCAGTAGTTTCACCCCAGCAGTCCCCACCAACTTC...CCTCTGCTGGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTCCACCTCAAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGGTGAGAAAACGGTCGGAGCTGCTCCAGTTGAACTTCCAGGGAGATTCTGCATCCACTGGGCGATaGACAGAAGGACCGGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: SEVRKRSELLQLNFQGDSASTGR*TEGPGA Trigger: GGCACCCGGTCCTTCTGTCCATCGCCCAGTGGATGC...AGAATCTCCCTGGAAGTTCAACTGGAGCAGCTCCGACCGTTTTCTCACCTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR TCA 90 bp | AGACGGACGAGGCTGAACCGCGTCATGGCTTCCAGGCCCCTTCTTGACTTGGCCCTGGTTTTCAGAATCTaGAGAATAGGAGGCTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: RRTRLNRVMASRPLLDLALVFRI*RIGGCK Trigger: CTTGCAGCCTCCTATTCTTCAGATTCTGAAAACCAG...GGCCAAGTCAAGAAGGGGCCTGGAAGCCATGACGCGGTTCAGCCTCGTCCGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCGAAGAGAGCTTGAGGGGTCAGAAGCTTTCTCAGCTGGCAAGACCTCAGGAGATGATGATCTAGAATaGGAAGGCTGTGGCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: ARRELEGSEAFSAGKTSGDDDLE*EGCGLG Trigger: TCCCAGGCCACAGCCTTCTCATTCTAGATCATCATC...TCCTGAGGTCTTGCCAGCTGAGAAAGCTTCTGACCCCTCAAGCTCTCTTCGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCTGCAGACGGACGAGGCTGAACCGCGTCATGGCTTCCAGGCCCCTTCTTTTCCTGTTCATTCTTTaGAGCAACAAATCGTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LLCRRTRLNRVMASRPLLFLFIL*SNKSWE Trigger: CTCCCACGATTTGTTGCTTCAAAGAATGAACAGGAA...AAGAAGGGGCCTGGAAGCCATGACGCGGTTCAGCCTCGTCCGTCTGCAGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCGAAGAGAGCTTGAGGGGTCAGAAGCTTTCTCAGCTGGCAAGACCTCAGGACATGTGGATTTTGCTTaGAGTCATGCGGATGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: ARRELEGSEAFSAGKTSGHVDFA*SHADGD Trigger: GTCCCCATCCGCATGACTCCAAGCAAAATCCACATG...TCCTGAGGTCTTGCCAGCTGAGAAAGCTTCTGACCCCTCAAGCTCTCTTCGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGAGGTGAGAAAACGGTCGGAGCTGCTCCAGTTGAACTTCCAGGGAGATTCTTTCTGCAGGAGAGCCTaGGTAACCTACCTCACCTGG | + |
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Preference number: 2 (lower is better) Translates to: SEVRKRSELLQLNFQGDSFCRRA*VTYLTW Trigger: CCAGGTGAGGTAGGTTACTCAGGCTCTCCTGCAGAA...AGAATCTCCCTGGAAGTTCAACTGGAGCAGCTCCGACCGTTTTCTCACCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCTTGAGGTGGAGGCGGGGACTGTCCAGACCACACCGCATCACCAGCAGAGGGGGAGATCCTTTACTTaGAGACATGATAAAACAAGG | + |
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Preference number: 2 (lower is better) Translates to: CLEVEAGTVQTTPHHQQRGRSFT*RHDKTR Trigger: CCTTGTTTTATCATGTCTTCAAGTAAAGGATCTCCC...CCTCTGCTGGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTCCACCTCAAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAATGAGACCTTTGACGAGTTACACTGCTCCCAATCTGCTCCGGGTCAGAGGGCTCTGATTCAGCTCTaGCCATGTCTGGTTCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LNETFDELHCSQSAPGQRALIQL*PCLVQG Trigger: TCCCTGAACCAGACATGGCCAGAGCTGAATCAGAGC...CCTCTGACCCGGAGCAGATTGGGAGCAGTGTAACTCGTCAAAGGTCTCATTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR CAA 90 bp | TCTTTTCTTCAGCTTTACTGTCCGCTTGGGCAGCCCGAAGAGAGCTaGAGGGGTCAGAAGCTTTCTCAGCTGGCAAGACCTCAGGATGTT | + |
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Preference number: 2 (lower is better) Translates to: SFLQLYCPLGQPEES*RGQKLSQLARPQDV Trigger: AACATCCTGAGGTCTTGCCAGCTGAGAAAGCTTCTGACCCCTCAAGCTCTCTTCGGGCTGCCCAAGCGGACAGTAAAGCTGAAGAAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTCTTCAGCTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATGCGGATGGACGGCATCGACGGTaGCTTGCTTGGAGGTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: CSLQLHFLHVDFAWSHADGRHRR*LAWRCF Trigger: GAAGCACCTCCAAGCAAGTCACCGTCGATGCCGTCC...ATCCGCATGACTCCAAGCAAAATCCACATGCAGGAAATGGAGCTGAAGAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTTAGAACAGCAGCTAGGACGCCTGTCTTCTGCGTATGCTCATCCACATCTGAGCCCGAAGAGAGCTTaGGGGGTCAGAAGCTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: MLEQQLGRLSSAYAHPHLSPKRA*GVRSFL Trigger: GAGAAAGCTTCTGACCCCTCAAGCTCTCTTCGGGCT...CAGATGTGGATGAGCATACGCAGAAGACAGGCGTCCTAGCTGCTGTTCTAACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCCTGCATGTGGATTTTGCTTGGAGTCATGCGGATGGGGACTGGATGCACAAGCATCGACGGTGACTTaGTTGGAGGTGCTTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: FPACGFCLESCGWGLDAQASTVT*LEVLLQ Trigger: CTGCAGAAGCACCTCCAAGCAAGTCACCGTCGATGC...TTGTGCATCCAGTCCCCATCCGCATGACTCCAAGCAAAATCCACATGCAGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGGTCAGAAGCTTTCTCAGCTGGCAAGACCTCAGGATGTTTCTCAGCTTCACCGGATGGGGACTGGATaGACAATAGCGGTATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: RGQKLSQLARPQDVSQLHRMGTG*TIAVSS Trigger: TGAGGATACCGCTATTGTGCATCCAGTCCCCATCCG...GTGAAGCTGAGAAACATCCTGAGGTCTTGCCAGCTGAGAAAGCTTCTGACCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGGTTTTGGTGGTGGAGCCAGAGGTGTTGTGCCTTTGCTCACATTGGCAGGATTTTGCTTGGAGTCATaGGGATGGGGACTGGATGCA | + |
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Preference number: 2 (lower is better) Translates to: TGFGGGARGVVPLLTLAGFCLES*GWGLDA Trigger: TGCATCCAGTCCCCATCCGCATGACTCCAAGCAAAA...TCCTGCCAATGTGAGCAAAGGCACAACACCTCTGGCTCCACCACCAAAACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR GCA 90 bp | CAATTCACTGTTCAGCCTGGCCAGAACCGTGTTGGTTTCCTTATTTCGTCTAATCCTACCTCACCTGGCTaGTCCCCCACATCTGCCGAA | + |
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Preference number: 2 (lower is better) Translates to: QFTVQPGQNRVGFLISSNPTSPG*SPTSAE Trigger: TTCGGCAGATGTGGGGGAGCAGCCAGGTGAGGTAGG...ATTAGACGAAATAAGGAAACCAACACGGTTCTGGCCAGGCTGAACAGTGAATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCTTTCTCAGCTGGCAAGACCTCAGGATGTTTCTCAGCTTCACTGTCTTGTTGTATCCTCACTGCTCTaGTTCAGCTCTGGCCATGTC | + |
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Preference number: 2 (lower is better) Translates to: KLSQLARPQDVSQLHCLVVSSLL*FSSGHV Trigger: GACATGGCCAGAGCTGAATCAGAGCAGTGAGGATAC...AACAAGACAGTGAAGCTGAGAAACATCCTGAGGTCTTGCCAGCTGAGAAAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGTCTTCTGCGTATGCTCATCCACATCTGGCCGTAACTCATCTTCTGACTTTTCTTCTAACAGGTTTTaGTGGTGGAGCCAGAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: PVFCVCSSTSGRNSSSDFSSNRF*WWSQRC Trigger: ACACCTCTGGCTCCACCACCAAAACCTGTTAGAAGA...AAAGTCAGAAGATGAGTTACGGCCAGATGTGGATGAGCATACGCAGAAGACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTCTTCAGCTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATGCGGATTGTTCAGTTAAGCAGTaGGCTGAATGTCTGGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: CSLQLHFLHVDFAWSHADCSVKQ*AECLGF Trigger: GAAACCCAGACATTCAGCTCACTGCTTAACTGAACA...ATCCGCATGACTCCAAGCAAAATCCACATGCAGGAAATGGAGCTGAAGAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCTTTCTCAGCTGGCAAGACCTCAGGATGTTTCTCAGCTTCACTGTCTTGTTTGGTATCTGCTGAGGTaGGGTACTAGTGTGAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: KLSQLARPQDVSQLHCLVWYLLR*GTSVSY Trigger: ATAACTCACACTAGTACCTCACCTCAGCAGATACCA...AACAAGACAGTGAAGCTGAGAAACATCCTGAGGTCTTGCCAGCTGAGAAAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGTCAGAAGCTTTCTCAGCTGGCAAGACCTCAGGATGTTTCTCAGCTTCACGAAATCTGCAAAATTTaGTTGTTCTGGTATCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: RGQKLSQLARPQDVSQLHEICKI*LFWYLL Trigger: CAGCAGATACCAGAACAACCAAATTTTGCAGATTTC...GTGAAGCTGAGAAACATCCTGAGGTCTTGCCAGCTGAGAAAGCTTCTGACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR CAA 90 bp | AATCTGAAGAATAGGAGGCTGCAAGGCGAGATTCCTGTTCATTCTTaGAAGCAACAAATCGTGGGAGAGGGAGATCCTTTACTTGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: NLKNRRLQGEIPVHS*KQQIVGEGDPLLED Trigger: GTCTTCAAGTAAAGGATCTCCCTCTCCCACGATTTGTTGCTTCAAAGAATGAACAGGAATCTCGCCTTGCAGCCTCCTATTCTTCAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGAGGTGAGAAAACGGTCGGAGCTGCTCCAGTTGAACTTCCAGGGAGATTCTAAATTGGCTGAAATCTaGAAAATTTGGTTGTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SEVRKRSELLQLNFQGDSKLAEI*KIWLFW Trigger: CCAGAACAACCAAATTTTGCAGATTTCAGCCAATTT...AGAATCTCCCTGGAAGTTCAACTGGAGCAGCTCCGACCGTTTTCTCACCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCTTTCTCAGCTGGCAAGACCTCAGGATGTTTCTCAGCTTCACTGTCTTGTTTCCATTTCCTGCATGTaGATTTTGCTTGGAGTCATG | + |
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Preference number: 2 (lower is better) Translates to: KLSQLARPQDVSQLHCLVSISCM*ILLGVM Trigger: CATGACTCCAAGCAAAATCCACATGCAGGAAATGGA...AACAAGACAGTGAAGCTGAGAAACATCCTGAGGTCTTGCCAGCTGAGAAAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR CAA 90 bp | TTTAATTGCTGTTGCAATTCACTGTTCAGCCTGGCCAGAACCGTGTaGGTTTCCTTATTTCGTCTAATGGATGCCTGGATAGCCTTTTTA | + |
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Preference number: 2 (lower is better) Translates to: FNCCCNSLFSLARTV*VSLFRLMDAWIAFL Trigger: TAAAAAGGCTATCCAGGCATCCATTAGACGAAATAAGGAAACCAACACGGTTCTGGCCAGGCTGAACAGTGAATTGCAACAGCAATTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| 3UTR-3UTR TCA 90 bp | CAATTCACTGTTCAGCCTGGCCAGAACCGTGTTGGTTTCCTTATTTCGTCTAATTTCTTCGGAGACATTTaGTGCAGCAAATACTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: QFTVQPGQNRVGFLISSNFFGDI*CSKYFK Trigger: TTTGAAGTATTTGCTGCATCAAATGTCTCCGAAGAA...ATTAGACGAAATAAGGAAACCAACACGGTTCTGGCCAGGCTGAACAGTGAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTTGAGGTGGAGGCGGGGACTGTCCAGACCACACCGCATCACCAGCAGAGGCTTCCAGGCCCCTTCTaGACTTGGCCTCTGCCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: CLEVEAGTVQTTPHHQQRLPGPF*TWPLPG Trigger: TCCCGGCAGAGGCCAAGTCAAGAAGGGGCCTGGAAG...CCTCTGCTGGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTCCACCTCAAGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| 3UTR TCA 72 bp | GACACAGGTTCCTGCTGCTCTGCAGACGGACGAGGCTaGACCGCGTCATGGCTTCCAGGCCCCTTCTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: DTGSCCSADGRG*TASWLPGPFLT Trigger: AGTCAAGAAGGGGCCTGGAAGCCATGACGCGGTTCAGCCTCGTCCGTCTGCAGAGCAGCAGGAACCTGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| 3UTR GCA 72 bp | AGACCACACCGCATCACCAGCAGAGGAGCCTGCTTGTaGATCACCAAAAGGAGACCAGAATGGCCCCGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RPHRITSRGACL*ITKRRPEWPRS Trigger: GGACCGGGGCCATTCTGGTCTCCTTTTGGTGATGCACAAGCAGGCTCCTCTGCTGGTGATGCGGTGTGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| 3UTR TCA 72 bp | GGGACTGGATGCACAATAGCGGTATCCTCACTGCTCTaGTTCAGCTCTGGCCATGTCTGGTTCAGGGACGGC | + |
|
Preference number: 3 (lower is better) Translates to: GTGCTIAVSSLL*FSSGHVWFRDG Trigger: GCCGTCCCTGAACCAGACATGGCCAGAGCTGAATCAGAGCAGTGAGGATACCGCTATTGTGCATCCAGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR TCA 72 bp | AGCTTTACTGTCCGCTTGGGCAGCCCGAAGAGAGCTTaGGGGGTCAGAAGCTTTCTCAGCTGGCAAGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: SFTVRLGSPKRA*GVRSFLSWQDL Trigger: GAGGTCTTGCCAGCTGAGAAAGCTTCTGACCCCTCAAGCTCTCTTCGGGCTGCCCAAGCGGACAGTAAAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR CCA 72 bp | TTCCTCCATGTGTGGGGAGAAGTTGGTGGGGACTGCTaGGGTGAAACTACTGGAGACACAGGTTCCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FLHVWGEVGGDC*GETTGDTGSCC Trigger: GCAGCAGGAACCTGTGTCTCCAGTAGTTTCACCCCAGCAGTCCCCACCAACTTCTCCCCACACATGGAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGAGGCGGGGACTGTCCAGACCACACCGCATCACCAGCAGAGGAGCCTGCTATTCCTGTTCATTCTTaGAAGCAACAAATCGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GGGGDCPDHTASPAEEPAIPVHS*KQQIVG Trigger: TCCCACGATTTGTTGCTTCAAAGAATGAACAGGAAT...AGCAGGCTCCTCTGCTGGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| 3UTR CCA 72 bp | GGAGCCTGCTTGTGCATCACCAAAAGGAGACCAGAATaGCCCCGGTCCTGTAAGAGGTCTCTCACTATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GACLCITKRRPE*PRSCKRSLTIP Trigger: GGGAATAGTGAGAGACCTCTTACAGGACCGGGGCCATTCTGGTCTCCTTTTGGTGATGCACAAGCAGGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGTTTTGGTGGTGGAGCCAGAGGTGTTGTGCCTTTGCTCACATTGGCAGGACAGCCCGAAGAGAGCTaGAGGGGTCAGAAGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TGFGGGARGVVPLLTLAGQPEES*RGQKLS Trigger: AGAAAGCTTCTGACCCCTCAAGCTCTCTTCGGGCTG...TCCTGCCAATGTGAGCAAAGGCACAACACCTCTGGCTCCACCACCAAAACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGACCTTTGACGAGTTACACTGCTCCCAATCTGCTCCGGGTCAGAGGGGAATCCAAGTCTATCAGCTaGGGCATCAGGCTTTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: MRPLTSYTAPNLLRVRGESKSIS*GIRLSG Trigger: CCCTGAAAGCCTGATGCCCAAGCTGATAGACTTGGA...TTCCCCTCTGACCCGGAGCAGATTGGGAGCAGTGTAACTCGTCAAAGGTCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR GCA 72 bp | GTGACGTTCCTGAATGAGACCTTTGACGAGTTACACTaGTCCCAATCTGCTCCGGGTCAGAGGGGAAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: VTFLNETFDELH*SQSAPGQRGKS Trigger: ACTCTTTCCCCTCTGACCCGGAGCAGATTGGGAGCAGTGTAACTCGTCAAAGGTCTCATTCAGGAACGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR CCA 72 bp | CCCCCACATCTGCCGAATCTTCCAAGTCTATCAGCTTaGGCATCAGGCTTTCAGGGAGTTTCTCTGGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PPHLPNLPSLSA*ASGFQGVSLVG Trigger: ACCTACCAGAGAAACTCCCTGAAAGCCTGATGCCCAAGCTGATAGACTTGGAAGATTCGGCAGATGTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR-3UTR CAA 90 bp | CGCTGCTTGTTCTCTTCAGCTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATCGACGGTGACTTGCTaGGAGGTGCTTCTGCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RCLFSSAPFPACGFCLESSTVTC*EVLLQE Trigger: CTCCTGCAGAAGCACCTCCAAGCAAGTCACCGTCGA...TGACTCCAAGCAAAATCCACATGCAGGAAATGGAGCTGAAGAGAACAAGCAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR TCA 72 bp | GATGGTTTCACAAGCAACGGGCTGGTGGGATTAGTGTaGTCGCTGCTTGTTCTCTTCAGCTCCATTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: DGFTSNGLVGLV*SLLVLFSSISC Trigger: GCAGGAAATGGAGCTGAAGAGAACAAGCAGCGATCACACTAATCCCACCAGCCCGTTGCTTGTGAAACCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR GCA 72 bp | GTTAGAACAGCAGCTAGGACGCCTGTCTTCTGCGTATaGTCATCCACATCTGGCCGTAACTCATCTTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: VRTAARTPVFCV*SSTSGRNSSSD Trigger: GTCAGAAGATGAGTTACGGCCAGATGTGGATGAGCATACGCAGAAGACAGGCGTCCTAGCTGCTGTTCTAAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR CCA 72 bp | TTAGTAGCTGTCTTTTCTTCAGCTTTACTGTCCGCTTaGGCAGCCCGAAGAGAGCTTGAGGGGTCAGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LVAVFSSALLSA*AARRELEGSEA Trigger: AGCTTCTGACCCCTCAAGCTCTCTTCGGGCTGCCCAAGCGGACAGTAAAGCTGAAGAAAAGACAGCTACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTCTTCTGCGTATGCTCATCCACATCTGGCCGTAACTCATCTTCTGACTTTGCATGTGGATTTTGCTaGGAGTCATGCGGATGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PVFCVCSSTSGRNSSSDFACGFC*ESCGWG Trigger: TCCCCATCCGCATGACTCCAAGCAAAATCCACATGC...AAAGTCAGAAGATGAGTTACGGCCAGATGTGGATGAGCATACGCAGAAGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR TCA 72 bp | AACACTCAAGACACCGTAAAGGAGACAGAGCATAGGTaGCGGAAATGGCAACCAGGTAGAAACGCACAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: NTQDTVKETEHR*RKWQPGRNAQG Trigger: ACCCTGTGCGTTTCTACCTGGTTGCCATTTCCGTCACCTATGCTCTGTCTCCTTTACGGTGTCTTGAGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216576.2 |
||
| 3UTR GCA 72 bp | TGTGATGTTAGAACAGCAGCTAGGACGCCTGTCTTCTaGGTATGCTCATCCACATCTGGCCGTAACTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: CDVRTAARTPVF*VCSSTSGRNSS Trigger: AGATGAGTTACGGCCAGATGTGGATGAGCATACGCAGAAGACAGGCGTCCTAGCTGCTGTTCTAACATCACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR CCA 72 bp | CATGTGGATTTTGCTTGGAGTCATGCGGATGGGGACTaGATGCACAATAGCGGTATCCTCACTGCTCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: HVDFAWSHADGD*MHNSGILTALI Trigger: AATCAGAGCAGTGAGGATACCGCTATTGTGCATCCAGTCCCCATCCGCATGACTCCAAGCAAAATCCACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR CCA 72 bp | TCTCTTCAGCTCCATTTCCTGCATGTGGATTTTGCTTaGAGTCATGCGGATGGGGACTGGATGCACAATAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLQLHFLHVDFA*SHADGDWMHNS Trigger: GCTATTGTGCATCCAGTCCCCATCCGCATGACTCCAAGCAAAATCCACATGCAGGAAATGGAGCTGAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR TCA 72 bp | ATAGGAGGCTGCAAGGCGAGATTCCTGTTCATTCTTTaGAGCAACAAATCGTGGGAGAGGGAGATCCTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: IGGCKARFLFIL*SNKSWEREILY Trigger: GTAAAGGATCTCCCTCTCCCACGATTTGTTGCTTCAAAGAATGAACAGGAATCTCGCCTTGCAGCCTCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| 3UTR-3UTR CAA 90 bp | TTATTTTCTTCTGAAAGGTCAGATGGTTTCACAAGCAACGGGCTGGTGGGATTATCCTGCATGTGGATTTaGCTTGGAGTCATGCGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LFSSERSDGFTSNGLVGLSCMWI*LGVMRM Trigger: CATCCGCATGACTCCAAGCAAAATCCACATGCAGGA...TAATCCCACCAGCCCGTTGCTTGTGAAACCATCTGACCTTTCAGAAGAAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATTCACTGTTCAGCCTGGCCAGAACCGTGTTGGTTTCCTTATTTCGTCTAATATCTGCAAAATTTGGTaGTTCTGGTATCTGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QFTVQPGQNRVGFLISSNICKIW*FWYLLR Trigger: CCTCAGCAGATACCAGAACAACCAAATTTTGCAGAT...ATTAGACGAAATAAGGAAACCAACACGGTTCTGGCCAGGCTGAACAGTGAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR GCA 72 bp | CAGAACCGTGTTGGTTTCCTTATTTCGTCTAATGGATaGCTGGATAGCCTTTTTATCTTTCCCCACAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: QNRVGFLISSNG*LDSLFIFPHRS Trigger: AGATCTGTGGGGAAAGATAAAAAGGCTATCCAGGCATCCATTAGACGAAATAAGGAAACCAACACGGTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGGAGGCGGGGACTGTCCAGACCACACCGCATCACCAGCAGAGGAGCCTGCGGAGGACCACGTCGTTaGGCAGCTGCGCGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RWRRGLSRPHRITSRGACGGPRR*AAARPG Trigger: TCCGGGCCGCGCAGCTGCCCAACGACGTGGTCCTCC...GCAGGCTCCTCTGCTGGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTCCACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| CDS-3UTR TCA 90 bp | TACTGGAGACACAGGTTCCTGCTGCTCTGCAGACGGACGAGGCTGAACCGCGTCCGAGCACTCGCCCGTTaGCCACCACCTTCTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YWRHRFLLLCRRTRLNRVRALAR*PPPSWC Trigger: GCACCAAGAAGGTGGTGGTCAACGGGCGAGTGCTCG...GACGCGGTTCAGCCTCGTCCGTCTGCAGAGCAGCAGGAACCTGTGTCTCCAGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGAGGCGGGGACTGTCCAGACCACACCGCATCACCAGCAGAGGAGCCTGCTCCACCACCTTCTTGGTaGTCTCGATGTCGCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGGGDCPDHTASPAEEPAPPPSW*SRCRSR Trigger: CCTACTGCGACATCGAGAGCACCAAGAAGGTGGTGG...AGCAGGCTCCTCTGCTGGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| CDS-3UTR GCA 90 bp | CCACACCGCATCACCAGCAGAGGAGCCTGCTTGTGCATCACCAAAAGGAGACCAACGTCGTTGGGCAGCTaGGCGGCCCGGAACAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PHRITSRGACLCITKRRPTSLGS*AARNSS Trigger: CGAGCTGTTCCGGGCCGCGCAGCTGCCCAACGACGT...TGGTCTCCTTTTGGTGATGCACAAGCAGGCTCCTCTGCTGGTGATGCGGTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| 3UTR CAA 72 bp | GGACAGAAGGACCGGGTGCCTGTGAGGGCTGAGGTCTaGGAGGCACTGCAGGAGGATGGGCAACAACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQKDRVPVRAEV*EALQEDGQQLQ Trigger: CTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGACCTCAGCCCTCACAGGCACCCGGTCCTTCTGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR CAA 72 bp | TCCAGACCACACCGCATCACCAGCAGAGGAGCCTGCTaGTGCATCACCAAAAGGAGACCAGAATGGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SRPHRITSRGAC*CITKRRPEWPR Trigger: CCGGGGCCATTCTGGTCTCCTTTTGGTGATGCACAAGCAGGCTCCTCTGCTGGTGATGCGGTGTGGTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGGAGGCGGGGACTGTCCAGACCACACCGCATCACCAGCAGAGGAGCCTGCAATGGAAAACCAGACTaGGCAACAGCTACAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RWRRGLSRPHRITSRGACNGKPD*ATATSF Trigger: GAAGCTTGTAGCTGTTGCCCAGTCTGGTTTTCCATT...GCAGGCTCCTCTGCTGGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTTTCTCAGCTGGCAAGACCTCAGGATGTTTCTCAGCTTCACTGTCTTGTTGGAGGACCACGTCGTTaGGCAGCTGCGCGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLSQLARPQDVSQLHCLVGGPRR*AAARPG Trigger: TCCGGGCCGCGCAGCTGCCCAACGACGTGGTCCTCC...AACAAGACAGTGAAGCTGAGAAACATCCTGAGGTCTTGCCAGCTGAGAAAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGACAGAGCATAGGTGACGGAAATGGCAACCAGGTAGAAACGCACAGGGTCGACCCCTCACTGCTCTaGTTCAGCTCTGGCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRQSIGDGNGNQVETHRVDPSLL*FSSGHV Trigger: GACATGGCCAGAGCTGAATCAGAGCAGTGAGGGGTC...GACCCTGTGCGTTTCTACCTGGTTGCCATTTCCGTCACCTATGCTCTGTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216576.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGACAGAGCATAGGTGACGGAAATGGCAACCAGGTAGAAACGCACAGGGTCGCATTCAGTGCGACTTaGCAGTGCGACCCCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RRQSIGDGNGNQVETHRVAFSAT*QCDPSL Trigger: CAGTGAGGGGTCGCACTGGCAAGTCGCACTGAATGC...GACCCTGTGCGTTTCTACCTGGTTGCCATTTCCGTCACCTATGCTCTGTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216576.2 |
||
| 3UTR CAA 72 bp | ATGTCTGGTTCAGGGACGGCATCGACGGTGACTTGCTaGGAGGTGCTTCTGCAGGAGAGCCTGAGTAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: MSGSGTASTVTC*EVLLQESLSNL Trigger: TAGGTTACTCAGGCTCTCCTGCAGAAGCACCTCCAAGCAAGTCACCGTCGATGCCGTCCCTGAACCAGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGTCAGAAGCTTTCTCAGCTGGCAAGACCTCAGGATGTTTCTCAGCTTCACGGAGACACAGGTTCCTaGTGCTCTGCAGACGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: RGQKLSQLARPQDVSQLHGDTGS*CSADGR Trigger: TCGTCCGTCTGCAGAGCAGCAGGAACCTGTGTCTCC...GTGAAGCTGAGAAACATCCTGAGGTCTTGCCAGCTGAGAAAGCTTCTGACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR GCA 90 bp | GCTCAAACCCCAGTTACAACACTGATCCACAGAAGCCGAGGAGCTCAGGTTCTAAGTGCGACCCCTCACTaGTCTGATTCAGCTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQTPVTTLIHRSRGAQVLSATPH*SDSALA Trigger: GGCCAGAGCTGAATCAGAGCAGTGAGGGGTCGCACT...TAGAACCTGAGCTCCTCGGCTTCTGTGGATCAGTGTTGTAACTGGGGTTTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216576.2 |
||
| CDS-3UTR GCA 90 bp | GCTCAAACCCCAGTTACAACACTGATCCACAGAAGCCGAGGAGCTCAGGTTCTAGCATGGAGCATTCAGTaGGACTTGCCAGTGCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: AQTPVTTLIHRSRGAQVLAWSIQ*DLPVRP Trigger: GGGTCGCACTGGCAAGTCGCACTGAATGCTCCATGC...TAGAACCTGAGCTCCTCGGCTTCTGTGGATCAGTGTTGTAACTGGGGTTTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216576.2 |
||
| 3UTR CAA 72 bp | GGCTCAGAGGTGAGAAAACGGTCGGAGCTGCTCCAGTaGAACTTCCAGGGAGATTCTCTCCTCCAGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: GSEVRKRSELLQ*NFQGDSLLQNI Trigger: GATGTTCTGGAGGAGAGAATCTCCCTGGAAGTTCAACTGGAGCAGCTCCGACCGTTTTCTCACCTCTGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCTTCAGCTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATGCGGATCGAGCACTCGCCCGTTaGCCACCACCTTCTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLQLHFLHVDFAWSHADRALAR*PPPSWC Trigger: GCACCAAGAAGGTGGTGGTCAACGGGCGAGTGCTCG...ATCCGCATGACTCCAAGCAAAATCCACATGCAGGAAATGGAGCTGAAGAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTTTCTCAGCTGGCAAGACCTCAGGATGTTTCTCAGCTTCACTGTCTTGTTTTCCAGGCCCCTTCTTaGCTTGGCCTCTGCCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KLSQLARPQDVSQLHCLVFQAPS*LGLCRE Trigger: CTCCCGGCAGAGGCCAAGTCAAGAAGGGGCCTGGAA...AACAAGACAGTGAAGCTGAGAAACATCCTGAGGTCTTGCCAGCTGAGAAAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR GCA 90 bp | TTATTTTCTTCTGAAAGGTCAGATGGTTTCACAAGCAACGGGCTGGTGGGATTAACGTCGTTGGGCAGCTaGGCGGCCCGGAACAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LFSSERSDGFTSNGLVGLTSLGS*AARNSS Trigger: CGAGCTGTTCCGGGCCGCGCAGCTGCCCAACGACGT...TAATCCCACCAGCCCGTTGCTTGTGAAACCATCTGACCTTTCAGAAGAAAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR GCA 90 bp | CGCTGCTTGTTCTCTTCAGCTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCACTGGGATGGCGGCTGTaGTTCCTCCATGTGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RCLFSSAPFPACGFCLESLGWRL*FLHVWG Trigger: TCCCCACACATGGAGGAAGCACAGCCGCCATCCCAG...TGACTCCAAGCAAAATCCACATGCAGGAAATGGAGCTGAAGAGAACAAGCAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGTGAGAAAACGGTCGGAGCTGCTCCAGTTGAACTTCCAGGGAGATTCTTGCTTCCTCCATGTGTaGGGAGAAGTTGGTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SEVRKRSELLQLNFQGDSCFLHV*GEVGGD Trigger: GTCCCCACCAACTTCTCCCCACACATGGAGGAAGCA...AGAATCTCCCTGGAAGTTCAACTGGAGCAGCTCCGACCGTTTTCTCACCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGACAGAGCATAGGTGACGGAAATGGCAACCAGGTAGAAACGCACAGGGTCGCTCTGATTCAGCTCTaGCCATGTCTGGTTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRQSIGDGNGNQVETHRVALIQL*PCLVQG Trigger: TCCCTGAACCAGACATGGCCAGAGCTGAATCAGAGC...GACCCTGTGCGTTTCTACCTGGTTGCCATTTCCGTCACCTATGCTCTGTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216576.2 |
||
| 3UTR CAA 72 bp | TCCCCCACATCTGCCGAATCTTCCAAGTCTATCAGCTaGGGCATCAGGCTTTCAGGGAGTTTCTCTGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPTSAESSKSIS*GIRLSGSFSGR Trigger: CCTACCAGAGAAACTCCCTGAAAGCCTGATGCCCAAGCTGATAGACTTGGAAGATTCGGCAGATGTGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGCATGTGGATTTTGCTTGGAGTCATGCGGATGGGGACTGGATGCACAAGTTGGTGGGGACTGCTaGGGTGAAACTACTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPACGFCLESCGWGLDAQVGGDC*GETTGD Trigger: GTCTCCAGTAGTTTCACCCCAGCAGTCCCCACCAAC...TTGTGCATCCAGTCCCCATCCGCATGACTCCAAGCAAAATCCACATGCAGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGTCAGAAGCTTTCTCAGCTGGCAAGACCTCAGGATGTTTCTCAGCTTCACAGTCTGAGAGTTCCCTaGTTGTGCATCACCAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGQKLSQLARPQDVSQLHSLRVP*LCITKR Trigger: CCTTTTGGTGATGCACAAGCAGGGAACTCTCAGACT...GTGAAGCTGAGAAACATCCTGAGGTCTTGCCAGCTGAGAAAGCTTCTGACCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR TCA 90 bp | CTGAATGAGACCTTTGACGAGTTACACTGCTCCCAATCTGCTCCGGGTCAGAGGTTCCTGTTCATTCTTTaGAGCAACAAATCGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNETFDELHCSQSAPGQRFLFIL*SNKSWE Trigger: CTCCCACGATTTGTTGCTTCAAAGAATGAACAGGAA...CCTCTGACCCGGAGCAGATTGGGAGCAGTGTAACTCGTCAAAGGTCTCATTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR CCA 90 bp | TGGATTTTGCTTGGAGTCATGCGGATGGGGACTGGATGCACAATAGCGGTATCCAATGGAAAACCAGACTaGGCAACAGCTACAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WILLGVMRMGTGCTIAVSNGKPD*ATATSF Trigger: GAAGCTTGTAGCTGTTGCCCAGTCTGGTTTTCCATT...GGATACCGCTATTGTGCATCCAGTCCCCATCCGCATGACTCCAAGCAAAATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR TCA 90 bp | TTGATTTTATTTTCTTCTGAAAGGTCAGATGGTTTCACAAGCAACGGGCTGGTGTGGGGACTGCTGGGGTaGAACTACTGGAGACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LILFSSERSDGFTSNGLVWGLLG*NYWRHR Trigger: CCTGTGTCTCCAGTAGTTTCACCCCAGCAGTCCCCA...CACCAGCCCGTTGCTTGTGAAACCATCTGACCTTTCAGAAGAAAATAAAATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR GCA 90 bp | TTATTTTCTTCTGAAAGGTCAGATGGTTTCACAAGCAACGGGCTGGTGGGATTACCACCACCTTCTTGGTaGTCTCGATGTCGCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSSERSDGFTSNGLVGLPPPSW*SRCRSR Trigger: CCTACTGCGACATCGAGAGCACCAAGAAGGTGGTGG...TAATCCCACCAGCCCGTTGCTTGTGAAACCATCTGACCTTTCAGAAGAAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR GCA 90 bp | CAATTCACTGTTCAGCCTGGCCAGAACCGTGTTGGTTTCCTTATTTCGTCTAATGAAGTTGGTGGGGACTaGTGGGGTGAAACTACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QFTVQPGQNRVGFLISSNEVGGD*WGETTG Trigger: TCCAGTAGTTTCACCCCAGCAGTCCCCACCAACTTC...ATTAGACGAAATAAGGAAACCAACACGGTTCTGGCCAGGCTGAACAGTGAATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCTTCAGCTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATGCGGATCTGGTTTTCAGAATCTaGAGAATAGGAGGCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSLQLHFLHVDFAWSHADLVFRI*RIGGCK Trigger: CTTGCAGCCTCCTATTCTTCAGATTCTGAAAACCAG...ATCCGCATGACTCCAAGCAAAATCCACATGCAGGAAATGGAGCTGAAGAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR TCA 90 bp | CCTGTCTTCTGCGTATGCTCATCCACATCTGGCCGTAACTCATCTTCTGACTTTATCTTTATCAAAGTCTaGGAGTTCCCTGCTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVFCVCSSTSGRNSSSDFIFIKV*EFPACA Trigger: TGCACAAGCAGGGAACTCTCAGACTTTGATAAAGAT...AAAGTCAGAAGATGAGTTACGGCCAGATGTGGATGAGCATACGCAGAAGACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR CAA 72 bp | TGTTGCAATTCACTGTTCAGCCTGGCCAGAACCGTGTaGGTTTCCTTATTTCGTCTAATGGATGCCTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: CCNSLFSLARTV*VSLFRLMDAWI Trigger: TATCCAGGCATCCATTAGACGAAATAAGGAAACCAACACGGTTCTGGCCAGGCTGAACAGTGAATTGCAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| 3UTR CAA 72 bp | AATAGGAGGCTGCAAGGCGAGATTCCTGTTCATTCTTaGAAGCAACAAATCGTGGGAGAGGGAGATCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NRRLQGEIPVHS*KQQIVGEGDPL Trigger: TAAAGGATCTCCCTCTCCCACGATTTGTTGCTTCAAAGAATGAACAGGAATCTCGCCTTGCAGCCTCCTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| CDS-3UTR GCA 90 bp | CGCTGCTTGTTCTCTTCAGCTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCAATAACCAAGTCTTGTTaGACCACAAAGCTCCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: RCLFSSAPFPACGFCLESITKSC*TTKLHD Trigger: ATCATGGAGCTTTGTGGTGCAACAAGACTTGGTTAT...TGACTCCAAGCAAAATCCACATGCAGGAAATGGAGCTGAAGAGAACAAGCAGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS GCA 90 bp | GCACCACAAAGCTCCATGATCTGGAGGACCACGTCGTTGGGCAGCTaGGCGGCCCGGAACAGCTCGAGCACTCGCCCGTTGACCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: APQSSMIWRTTSLGS*AARNSSSTRPLTTT Trigger: GGTGGTGGTCAACGGGCGAGTGCTCGAGCTGTTCCGGGCCGCGCAGCTGCCCAACGACGTGGTCCTCCAGATCATGGAGCTTTGTGGTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000155284.8 ENSMUST00000164556.8 ENSMUST00000216413.2 |
||
| CDS TCA 90 bp | CGTTGGGCAGCTGCGCGGCCCGGAACAGCTCGAGCACTCGCCCGTTaGCCACCACCTTCTTGGTGCTCTCGATGTCGCAGTAGGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RWAAARPGTARALAR*PPPSWCSRCRSRRR Trigger: TCTTCTCCTACTGCGACATCGAGAGCACCAAGAAGGTGGTGGTCAACGGGCGAGTGCTCGAGCTGTTCCGGGCCGCGCAGCTGCCCAACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000155284.8 ENSMUST00000164556.8 ENSMUST00000216413.2 |
||
| CDS TCA 90 bp | GCAGCTGAGGCTACAGTCCGTACTGTCGTCTGGTCCCAGTTGTCTTaGGGTGGAGGCGGGGACTGTCCAGACCACACCGCATCACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AAEATVRTVVWSQLS*GGGGDCPDHTASPA Trigger: TGCTGGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTCCACCTCAAGACAACTGGGACCAGACGACAGTACGGACTGTAGCCTCAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155959.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGCGGGGACTGTCCAGACCACACCGCATCACCAGCAGAGGAGCCTGCTTGTTTGACCACCACCTTCTaGGTGCTCTCGATGTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGGDCPDHTASPAEEPACLTTTF*VLSMSQ Trigger: CTGCGACATCGAGAGCACCAAGAAGGTGGTGGTCAA...ACAAGCAGGCTCCTCTGCTGGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| CDS-3UTR CAA 90 bp | CCACACCGCATCACCAGCAGAGGAGCCTGCTTGTGCATCACCAAAAGGAGACCATCGAGCACTCGCCCGTaGACCACCACCTTCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PHRITSRGACLCITKRRPSSTRP*TTTFLV Trigger: CACCAAGAAGGTGGTGGTCAACGGGCGAGTGCTCGA...TGGTCTCCTTTTGGTGATGCACAAGCAGGCTCCTCTGCTGGTGATGCGGTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTCTTCTGCGTATGCTCATCCACATCTGGCCGTAACTCATCTTCTGACTTTTGGAGGACCACGTCGTaGGGCAGCTGCGCGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PVFCVCSSTSGRNSSSDFWRTTS*GSCAAR Trigger: CCGGGCCGCGCAGCTGCCCAACGACGTGGTCCTCCA...AAAGTCAGAAGATGAGTTACGGCCAGATGTGGATGAGCATACGCAGAAGACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR CAA 90 bp | CTGAATGAGACCTTTGACGAGTTACACTGCTCCCAATCTGCTCCGGGTCAGAGGCTTCCAGGCCCCTTCTaGACTTGGCCTCTGCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LNETFDELHCSQSAPGQRLPGPF*TWPLPG Trigger: TCCCGGCAGAGGCCAAGTCAAGAAGGGGCCTGGAAG...CCTCTGACCCGGAGCAGATTGGGAGCAGTGTAACTCGTCAAAGGTCTCATTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS TCA 90 bp | AGAGCACTGGTTGGTGGAGTATCTGCAAAACTGACCCAGTTGTCTTaGGGTGGAGGCGGGGACTGTCCAGACCACACCGCATCACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RALVGGVSAKLTQLS*GGGGDCPDHTASPA Trigger: TGCTGGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTCCACCTCAAGACAACTGGGTCAGTTTTGCAGATACTCCACCAACCAGTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000164556.8 |
||
| CDS CCA 90 bp | ACTGGTTGGTGGAGTATCTGCAAAACTGACCCAGTTGTCTTGAGGTaGAGGCGGGGACTGTCCAGACCACACCGCATCACCAGCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TGWWSICKTDPVVLR*RRGLSRPHRITSRG Trigger: TCCTCTGCTGGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTCCACCTCAAGACAACTGGGTCAGTTTTGCAGATACTCCACCAACCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000164556.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGACAGAGCATAGGTGACGGAAATGGCAACCAGGTAGAAACGCACAGGGTCAGCATTCAGTGCGACTaGCCAGTGCGACCCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: RRQSIGDGNGNQVETHRVSIQCD*PVRPLT Trigger: AGTGAGGGGTCGCACTGGCAAGTCGCACTGAATGCT...GACCCTGTGCGTTTCTACCTGGTTGCCATTTCCGTCACCTATGCTCTGTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216576.2 |
||
| CDS TCA 90 bp | CTCATAACTACTGGATTGCCTACGGATCTCATTGGCAGTTGCAGCTaGGGCTACAGTCCGTACTGTCGTCTGGTCCTGGACAGAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LITTGLPTDLIGSCS*GYSPYCRLVLDRSR Trigger: CCTGCTTCTGTCCAGGACCAGACGACAGTACGGACTGTAGCCTCAGCTGCAACTGCCAATGAGATCCGTAGGCAATCCAGTAGTTATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000164556.8 |
||
| CDS CCA 90 bp | TTGGCAGTTGCAGCTGAGGCTACAGTCCGTACTGTCGTCTGGTCCTaGACAGAAGCAGGATGCATGGTTAAAAGAGCACTGGTTGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LAVAAEATVRTVVWS*TEAGCMVKRALVGG Trigger: TCCACCAACCAGTGCTCTTTTAACCATGCATCCTGCTTCTGTCCAGGACCAGACGACAGTACGGACTGTAGCCTCAGCTGCAACTGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000164556.8 |
||
| CDS CCA 90 bp | TCTTCCAGGGATCCTCATAACTACTGGATTGCCTACGGATCTCATTaGCAGTTGCAGCTGAGGCTACAGTCCGTACTGTCGTCTGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRDPHNYWIAYGSH*QLQLRLQSVLSSGP Trigger: GGGACCAGACGACAGTACGGACTGTAGCCTCAGCTGCAACTGCCAATGAGATCCGTAGGCAATCCAGTAGTTATGAGGATCCCTGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155959.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGTCAGAAGCTTTCTCAGCTGGCAAGACCTCAGGATGTTTCTCAGCTTCACTTGACCACCACCTTCTaGGTGCTCTCGATGTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RGQKLSQLARPQDVSQLHLTTTF*VLSMSQ Trigger: CTGCGACATCGAGAGCACCAAGAAGGTGGTGGTCAA...GTGAAGCTGAGAAACATCCTGAGGTCTTGCCAGCTGAGAAAGCTTCTGACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS TCA 90 bp | CTCATAACTACTGGATTGCCTACGGATCTCATTGGCAGTTGCAGCTaGGGCTACAGTCCGTACTGTCGTCTGGTCCCAGTTGTCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LITTGLPTDLIGSCS*GYSPYCRLVPVVLR Trigger: CCTCAAGACAACTGGGACCAGACGACAGTACGGACTGTAGCCTCAGCTGCAACTGCCAATGAGATCCGTAGGCAATCCAGTAGTTATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155959.8 |
||
| CDS CCA 90 bp | TCTTCCAGGGATCCTCATAACTACTGGATTGCCTACGGATCTCATTaGCAGTTGCAGCTGAGGCTACAGTCCGTACTGTCGTCTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSRDPHNYWIAYGSH*QLQLRLQSVLSSGP Trigger: AGGACCAGACGACAGTACGGACTGTAGCCTCAGCTGCAACTGCCAATGAGATCCGTAGGCAATCCAGTAGTTATGAGGATCCCTGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000164556.8 |
||
| CDS CCA 90 bp | ATCTCATTGGCAGTTGCAGCTGAGGCTACAGTCCGTACTGTCGTCTaGTCCTGGACAGAAGCAGGATGCATGGTTAAAAGAGCACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ISLAVAAEATVRTVV*SWTEAGCMVKRALV Trigger: AACCAGTGCTCTTTTAACCATGCATCCTGCTTCTGTCCAGGACCAGACGACAGTACGGACTGTAGCCTCAGCTGCAACTGCCAATGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000164556.8 |
||
| CDS CCA 90 bp | GCTGCTTGTTCTCTTCAGCTCCATTTCCTGCATGTGGATTTTGCTTaGAGTCATGCGGATGGGGACTGGATGCACAATAGCGGTATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AACSLQLHFLHVDFA*SHADGDWMHNSGIR Trigger: CCTGATACCGCTATTGTGCATCCAGTCCCCATCCGCATGACTCCAAGCAAAATCCACATGCAGGAAATGGAGCTGAAGAGAACAAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126390.8 ENSMUST00000155892.3 |
||
| CDS-3UTR CAA 90 bp | CAATTCACTGTTCAGCCTGGCCAGAACCGTGTTGGTTTCCTTATTTCGTCTAATTCGAGCACTCGCCCGTaGACCACCACCTTCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QFTVQPGQNRVGFLISSNSSTRP*TTTFLV Trigger: CACCAAGAAGGTGGTGGTCAACGGGCGAGTGCTCGA...ATTAGACGAAATAAGGAAACCAACACGGTTCTGGCCAGGCTGAACAGTGAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR CAA 90 bp | TTGATTTTATTTTCTTCTGAAAGGTCAGATGGTTTCACAAGCAACGGGCTGGTGAGGCCCCTTCTTGACTaGGCCTCTGCCGGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LILFSSERSDGFTSNGLVRPLLD*ASAGRR Trigger: CCTCCTCCCGGCAGAGGCCAAGTCAAGAAGGGGCCT...CACCAGCCCGTTGCTTGTGAAACCATCTGACCTTTCAGAAGAAAATAAAATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS CCA 90 bp | ACTGTCTCTGCTCATCTGTTATCTTCCAGGGATCCTCATAACTACTaGATTGCCTACGGATCTCATTGGCAGTTGCAGCTGAGGCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: TVSAHLLSSRDPHNY*IAYGSHWQLQLRLQ Trigger: CTGTAGCCTCAGCTGCAACTGCCAATGAGATCCGTAGGCAATCCAGTAGTTATGAGGATCCCTGGAAGATAACAGATGAGCAGAGACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000155959.8 ENSMUST00000164556.8 |
||
| CDS-3UTR CAA 90 bp | CCTGTCTTCTGCGTATGCTCATCCACATCTGGCCGTAACTCATCTTCTGACTTTCTGAGAGTTCCCTGCTaGTGCATCACCAAAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PVFCVCSSTSGRNSSSDFLRVPC*CITKRR Trigger: TCTCCTTTTGGTGATGCACAAGCAGGGAACTCTCAG...AAAGTCAGAAGATGAGTTACGGCCAGATGTGGATGAGCATACGCAGAAGACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGTCAGAAGCTTTCTCAGCTGGCAAGACCTCAGGATGTTTCTCAGCTTCACCAAAATAACCAAGTCTaGTTGCACCACAAAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RGQKLSQLARPQDVSQLHQNNQV*LHHKAP Trigger: TGGAGCTTTGTGGTGCAACAAGACTTGGTTATTTTG...GTGAAGCTGAGAAACATCCTGAGGTCTTGCCAGCTGAGAAAGCTTCTGACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAGGTGAGAAAACGGTCGGAGCTGCTCCAGTTGAACTTCCAGGGAGATTCTATTCCTGTTCATTCTTaGAAGCAACAAATCGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SEVRKRSELLQLNFQGDSIPVHS*KQQIVG Trigger: TCCCACGATTTGTTGCTTCAAAGAATGAACAGGAAT...AGAATCTCCCTGGAAGTTCAACTGGAGCAGCTCCGACCGTTTTCTCACCTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
||
| CDS CCA 90 bp | ACAATAGCGGTATCAGGATCAGCTGGTGCAATGTTAGAATCAAATTaGGTCAGAGTTTGTGAGCTTGAAGAGCGTTCACTAAATGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TIAVSGSAGAMLESN*VRVCELEERSLNVS Trigger: GGAGACATTTAGTGAACGCTCTTCAAGCTCACAAACTCTGACCCAATTTGATTCTAACATTGCACCAGCTGATCCTGATACCGCTATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126390.8 ENSMUST00000155892.3 |
||
| CDS-3UTR CAA 90 bp | CCTGTTCATTCTTTGAAGCAACAAATCGTGGGAGAGGGAGATCCTTTACTTGAACAAAATAACCAAGTCTaGTTGCACCACAAAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PVHSLKQQIVGEGDPLLEQNNQV*LHHKAP Trigger: TGGAGCTTTGTGGTGCAACAAGACTTGGTTATTTTG...TTCAAGTAAAGGATCTCCCTCTCCCACGATTTGTTGCTTCAAAGAATGAACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216413.2 |
||
| CDS GCA 72 bp | AGCTCCATGATCTGGAGGACCACGTCGTTGGGCAGCTaGGCGGCCCGGAACAGCTCGAGCACTCGCCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSMIWRTTSLGS*AARNSSSTRPL Trigger: CAACGGGCGAGTGCTCGAGCTGTTCCGGGCCGCGCAGCTGCCCAACGACGTGGTCCTCCAGATCATGGAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000155284.8 ENSMUST00000164556.8 ENSMUST00000216413.2 |
||
| CDS TCA 72 bp | GCTGCGCGGCCCGGAACAGCTCGAGCACTCGCCCGTTaGCCACCACCTTCTTGGTGCTCTCGATGTCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AARPGTARALAR*PPPSWCSRCRS Trigger: ACTGCGACATCGAGAGCACCAAGAAGGTGGTGGTCAACGGGCGAGTGCTCGAGCTGTTCCGGGCCGCGCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000155284.8 ENSMUST00000164556.8 ENSMUST00000216413.2 |
||
| CDS CAA 72 bp | AGCTGCGCGGCCCGGAACAGCTCGAGCACTCGCCCGTaGACCACCACCTTCTTGGTGCTCTCGATGTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SCAARNSSSTRP*TTTFLVLSMSQ Trigger: CTGCGACATCGAGAGCACCAAGAAGGTGGTGGTCAACGGGCGAGTGCTCGAGCTGTTCCGGGCCGCGCAGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000155284.8 ENSMUST00000164556.8 ENSMUST00000216413.2 |
||
| CDS CAA 72 bp | GCACCACAAAGCTCCATGATCTGGAGGACCACGTCGTaGGGCAGCTGCGCGGCCCGGAACAGCTCGAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: APQSSMIWRTTS*GSCAARNSSST Trigger: AGTGCTCGAGCTGTTCCGGGCCGCGCAGCTGCCCAACGACGTGGTCCTCCAGATCATGGAGCTTTGTGGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000155284.8 ENSMUST00000164556.8 ENSMUST00000216413.2 |
||
| CDS CCA 72 bp | AGTCCGTACTGTCGTCTGGTCCCAGTTGTCTTGAGGTaGAGGCGGGGACTGTCCAGACCACACCGCATCACC | + |
|
Preference number: 6 (lower is better) Translates to: SPYCRLVPVVLR*RRGLSRPHRIT Trigger: GGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTCCACCTCAAGACAACTGGGACCAGACGACAGTACGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155959.8 |
||
| CDS CAA 72 bp | GGTTGGTGGAGTATCTGCAAAACTGACCCAGTTGTCTaGAGGTGGAGGCGGGGACTGTCCAGACCACACCGC | + |
|
Preference number: 6 (lower is better) Translates to: GWWSICKTDPVV*RWRRGLSRPHR Trigger: GCGGTGTGGTCTGGACAGTCCCCGCCTCCACCTCAAGACAACTGGGTCAGTTTTGCAGATACTCCACCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000164556.8 |
||
| CDS CAA 90 bp | AAGAGCACTGGTTGGTGGAGTATCTGCAAAACTGACCCAGTTGTCTaGAGGTGGAGGCGGGGACTGTCCAGACCACACCGCATCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: KSTGWWSICKTDPVV*RWRRGLSRPHRITS Trigger: GCTGGTGATGCGGTGTGGTCTGGACAGTCCCCGCCTCCACCTCAAGACAACTGGGTCAGTTTTGCAGATACTCCACCAACCAGTGCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000164556.8 |
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| CDS TCA 72 bp | GTTGGTGGAGTATCTGCAAAACTGACCCAGTTGTCTTaGGGTGGAGGCGGGGACTGTCCAGACCACACCGCA | + |
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Preference number: 6 (lower is better) Translates to: VGGVSAKLTQLS*GGGGDCPDHTA Trigger: TGCGGTGTGGTCTGGACAGTCCCCGCCTCCACCTCAAGACAACTGGGTCAGTTTTGCAGATACTCCACCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000164556.8 |
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| CDS TCA 72 bp | ACTGGATTGCCTACGGATCTCATTGGCAGTTGCAGCTaGGGCTACAGTCCGTACTGTCGTCTGGTCCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: TGLPTDLIGSCS*GYSPYCRLVLD Trigger: GTCCAGGACCAGACGACAGTACGGACTGTAGCCTCAGCTGCAACTGCCAATGAGATCCGTAGGCAATCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000164556.8 |
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| CDS TCA 72 bp | ACTGGATTGCCTACGGATCTCATTGGCAGTTGCAGCTaGGGCTACAGTCCGTACTGTCGTCTGGTCCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: TGLPTDLIGSCS*GYSPYCRLVPV Trigger: AACTGGGACCAGACGACAGTACGGACTGTAGCCTCAGCTGCAACTGCCAATGAGATCCGTAGGCAATCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155959.8 |
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| CDS CCA 72 bp | GTTCCCTGCTTGTGCATCACCAAAAGGAGACCAGAATaGCCCCGGTCCTGTAAGAGGTCTCTCACTATTCCC | + |
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Preference number: 6 (lower is better) Translates to: VPCLCITKRRPE*PRSCKRSLTIP Trigger: GGGAATAGTGAGAGACCTCTTACAGGACCGGGGCCATTCTGGTCTCCTTTTGGTGATGCACAAGCAGGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155284.8 |
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| CDS CAA 90 bp | AGGGATCCTCATAACTACTGGATTGCCTACGGATCTCATTGGCAGTaGCAGCTGAGGCTACAGTCCGTACTGTCGTCTGGTCCTGGACAG | + |
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Preference number: 6 (lower is better) Translates to: RDPHNYWIAYGSHWQ*QLRLQSVLSSGPGQ Trigger: CTGTCCAGGACCAGACGACAGTACGGACTGTAGCCTCAGCTGCAACTGCCAATGAGATCCGTAGGCAATCCAGTAGTTATGAGGATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000164556.8 |
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| CDS CCA 72 bp | GCAGTTGCAGCTGAGGCTACAGTCCGTACTGTCGTCTaGTCCTGGACAGAAGCAGGATGCATGGTTAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: AVAAEATVRTVV*SWTEAGCMVKR Trigger: TCTTTTAACCATGCATCCTGCTTCTGTCCAGGACCAGACGACAGTACGGACTGTAGCCTCAGCTGCAACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000164556.8 |
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| CDS CCA 72 bp | CATGTGGATTTTGCTTGGAGTCATGCGGATGGGGACTaGATGCACAATAGCGGTATCAGGATCAGCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: HVDFAWSHADGD*MHNSGIRISWC Trigger: GCACCAGCTGATCCTGATACCGCTATTGTGCATCCAGTCCCCATCCGCATGACTCCAAGCAAAATCCACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126390.8 ENSMUST00000155892.3 |
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| CDS CAA 90 bp | AGGGATCCTCATAACTACTGGATTGCCTACGGATCTCATTGGCAGTaGCAGCTGAGGCTACAGTCCGTACTGTCGTCTGGTCCCAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: RDPHNYWIAYGSHWQ*QLRLQSVLSSGPSC Trigger: ACAACTGGGACCAGACGACAGTACGGACTGTAGCCTCAGCTGCAACTGCCAATGAGATCCGTAGGCAATCCAGTAGTTATGAGGATCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155959.8 |
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| CDS GCA 72 bp | TGGATTTTGCTTGGAGTCATGCGGATGGGGACTGGATaGACAATAGCGGTATCAGGATCAGCTGGTGCAATG | + |
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Preference number: 6 (lower is better) Translates to: WILLGVMRMGTG*TIAVSGSAGAM Trigger: CATTGCACCAGCTGATCCTGATACCGCTATTGTGCATCCAGTCCCCATCCGCATGACTCCAAGCAAAATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126390.8 ENSMUST00000155892.3 |
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| CDS CCA 72 bp | GATCCTCATAACTACTGGATTGCCTACGGATCTCATTaGCAGTTGCAGCTGAGGCTACAGTCCGTACTGTCG | + |
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Preference number: 6 (lower is better) Translates to: DPHNYWIAYGSH*QLQLRLQSVLS Trigger: CGACAGTACGGACTGTAGCCTCAGCTGCAACTGCCAATGAGATCCGTAGGCAATCCAGTAGTTATGAGGATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000155959.8 ENSMUST00000164556.8 |
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| CDS CAA 72 bp | CATAACTACTGGATTGCCTACGGATCTCATTGGCAGTaGCAGCTGAGGCTACAGTCCGTACTGTCGTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: HNYWIAYGSHWQ*QLRLQSVLSSG Trigger: ACCAGACGACAGTACGGACTGTAGCCTCAGCTGCAACTGCCAATGAGATCCGTAGGCAATCCAGTAGTTATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000155959.8 ENSMUST00000164556.8 |
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| CDS CCA 72 bp | GCTCATCTGTTATCTTCCAGGGATCCTCATAACTACTaGATTGCCTACGGATCTCATTGGCAGTTGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: AHLLSSRDPHNY*IAYGSHWQLQL Trigger: CAGCTGCAACTGCCAATGAGATCCGTAGGCAATCCAGTAGTTATGAGGATCCCTGGAAGATAACAGATGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000155959.8 ENSMUST00000164556.8 |
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| CDS CAA 72 bp | AGGCACTGCAGGAGGATGGGCAACAACTCCAGCCTGTaGTTGTCCTACGGTATTTCCAGAAGGAAATTTTAC | + |
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Preference number: 6 (lower is better) Translates to: RHCRRMGNNSSL*LSYGISRRKFY Trigger: GTAAAATTTCCTTCTGGAAATACCGTAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154718.8 |
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| CDS CCA 72 bp | GGGGACTGGATGCACAATAGCGGTATCAGGATCAGCTaGTGCAATGTTAGAATCAAATTGGGTCAGAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: GDWMHNSGIRIS*CNVRIKLGQSL Trigger: CAAACTCTGACCCAATTTGATTCTAACATTGCACCAGCTGATCCTGATACCGCTATTGTGCATCCAGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126390.8 ENSMUST00000155892.3 |
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| CDS GCA 72 bp | GTAGAACTGACTTCTTCCAAAATAACCAAGTCTTGTTaGACCACAAAGCTCCATGATCTGGAGGACCACGTC | + |
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Preference number: 6 (lower is better) Translates to: VELTSSKITKSC*TTKLHDLEDHV Trigger: GACGTGGTCCTCCAGATCATGGAGCTTTGTGGTGCAACAAGACTTGGTTATTTTGGAAGAAGTCAGTTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000155284.8 ENSMUST00000164556.8 ENSMUST00000216413.2 |
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| CDS CAA 90 bp | AATCTGAAGAATAGGAGGCTGCAAGGCGAGATTCCTGTTCATTCTTaGAAGCAACAAATCGTGGGAGAGGGAGATCCTTTACAGTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: NLKNRRLQGEIPVHS*KQQIVGEGDPLQCL Trigger: TAAACACTGTAAAGGATCTCCCTCTCCCACGATTTGTTGCTTCAAAGAATGAACAGGAATCTCGCCTTGCAGCCTCCTATTCTTCAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000126390.8 ENSMUST00000150029.8 ENSMUST00000154718.8 ENSMUST00000155284.8 ENSMUST00000164556.8 |
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