Pregenerated sensors for REP15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040121Ensembl transcript IDs: ENSMUST00000036194.6
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGGGATCACTTTCAGTCAATGTAGGGGGTGGATAGCCCTGTGTTaGGGATTGTCCTCCTGTTCTGTCTCACAGGCCAGTCACAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: PGITFSQCRGWIALC*GLSSCSVSQASHSN Trigger: GTTGCTGTGACTGGCCTGTGAGACAGAACAGGAGGACAATCCCCAACACAGGGCTATCCACCCCCTACATTGACTGAAAGTGATCCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR TCA 90 bp | ATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCAGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCTGCT | + |
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Preference number: 1 (lower is better) Translates to: ISLRMVVSHHVVAGI*TQDLRKSSRVLLPA Trigger: AGCAGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR CCA 90 bp | GAGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCGGGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ESDLVTDGCEPPCGC*DLNSGPSEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR GCA 90 bp | TTGAACCCTATGTTAAATACTTTGAAAGTCCTTTATTTGTGGAGTTaGTGGGAAGAAGCAATTGTGGAGGGAGGGCTCAGAAGGTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: LNPMLNTLKVLYLWS*WEEAIVEGGLRRSA Trigger: TGCTGACCTTCTGAGCCCTCCCTCCACAATTGCTTCTTCCCAGCAACTCCACAAATAAAGGACTTTCAAAGTATTTAACATAGGGTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR CAA 90 bp | GATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCTGC | + |
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Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGCWD*NSGPSEEQSGALTC Trigger: GCAGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGAGGGAGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCCACCTCATGAACAGTTaGTCTCCTTACAACAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: QKRESDLVTDGCEPPCGCHLMNS*SPYNSS Trigger: ACTGCTGTTGTAAGGAGAGCAACTGTTCATGAGGTG...GCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACTCCCTCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGAGGGAGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTATTTGTGGAGTTGCTaGGAAGAAGCAATTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: QKRESDLVTDGCEPPCGCYLWSC*EEAIVE Trigger: CTCCACAATTGCTTCTTCCCAGCAACTCCACAAATA...GCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACTCCCTCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGAGGGAGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCCTTTATTTGTGGAGTTaGTGGGAAGAAGCAATTGTG | + |
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Preference number: 2 (lower is better) Translates to: QKRESDLVTDGCEPPCGCLYLWS*WEEAIV Trigger: CACAATTGCTTCTTCCCAGCAACTCCACAAATAAAG...GCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACTCCCTCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR CAA 90 bp | GTTGAACCCTATGTTAAATACTTTGAAAGTCCTTTATTTGTGGAGTaGCTGGGAAGAAGCAATTGTGGAGGGAGGGCTCAGAAGGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: VEPYVKYFESPLFVE*LGRSNCGGRAQKVS Trigger: GCTGACCTTCTGAGCCCTCCCTCCACAATTGCTTCTTCCCAGCAACTCCACAAATAAAGGACTTTCAAAGTATTTAACATAGGGTTCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR CAA 90 bp | AACACCCAGTTGAACCCTATGTTAAATACTTTGAAAGTCCTTTATTaGTGGAGTTGCTGGGAAGAAGCAATTGTGGAGGGAGGGCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: NTQLNPMLNTLKVLY*WSCWEEAIVEGGLR Trigger: TCTGAGCCCTCCCTCCACAATTGCTTCTTCCCAGCAACTCCACAAATAAAGGACTTTCAAAGTATTTAACATAGGGTTCAACTGGGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR CAA 90 bp | TATTTCACCGGTGACTCAGTAACTCATGGTATAGCTAACACCCAGTaGAACCCTATGTTAAATACTTTGAAAGTCCTTTATTTGTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: YFTGDSVTHGIANTQ*NPMLNTLKVLYLWS Trigger: ACTCCACAAATAAAGGACTTTCAAAGTATTTAACATAGGGTTCAACTGGGTGTTAGCTATACCATGAGTTACTGAGTCACCGGTGAAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR CCA 72 bp | CTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCG | + |
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Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNSGPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR GCA 72 bp | GATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCAGGACCTTCGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLVTDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR CCA 72 bp | ACTTTCAGTCAATGTAGGGGGTGGATAGCCCTGTGTTaGGGATTGTCCTCCTGTTCTGTCTCACAGGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: TFSQCRGWIALC*GLSSCSVSQAS Trigger: ACTGGCCTGTGAGACAGAACAGGAGGACAATCCCCAACACAGGGCTATCCACCCCCTACATTGACTGAAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR-3UTR CAA 90 bp | CCTGAACCAAAACTGACATCCCCACCACACCTCATGAACAGTTGCTCTCCTTACGTGGATAGCCCTGTGTaGGGGATTGTCCTCCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: PEPKLTSPPHLMNSCSPYVDSPV*GIVLLF Trigger: GAACAGGAGGACAATCCCCAACACAGGGCTATCCAC...GTAAGGAGAGCAACTGTTCATGAGGTGTGGTGGGGATGTCAGTTTTGGTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR CCA 72 bp | TTTAACCCAGGGATCACTTTCAGTCAATGTAGGGGGTaGATAGCCCTGTGTTGGGGATTGTCCTCCTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: FNPGITFSQCRG*IALCWGLSSCS Trigger: AGAACAGGAGGACAATCCCCAACACAGGGCTATCCACCCCCTACATTGACTGAAAGTGATCCCTGGGTTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR-3UTR CAA 90 bp | CAGAAGAGGGAGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCCCTTTATTTGTGGAGTaGCTGGGAAGAAGCAATTGT | + |
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Preference number: 3 (lower is better) Translates to: QKRESDLVTDGCEPPCGCPLFVE*LGRSNC Trigger: ACAATTGCTTCTTCCCAGCAACTCCACAAATAAAGG...GCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACTCCCTCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR CCA 72 bp | TTAAATACTTTGAAAGTCCTTTATTTGTGGAGTTGCTaGGAAGAAGCAATTGTGGAGGGAGGGCTCAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: LNTLKVLYLWSC*EEAIVEGGLRR Trigger: CCTTCTGAGCCCTCCCTCCACAATTGCTTCTTCCCAGCAACTCCACAAATAAAGGACTTTCAAAGTATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR GCA 72 bp | ATGTTAAATACTTTGAAAGTCCTTTATTTGTGGAGTTaGTGGGAAGAAGCAATTGTGGAGGGAGGGCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: MLNTLKVLYLWS*WEEAIVEGGLR Trigger: TCTGAGCCCTCCCTCCACAATTGCTTCTTCCCAGCAACTCCACAAATAAAGGACTTTCAAAGTATTTAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR CCA 90 bp | AGGGGGTGGATAGCCCTGTGTTGGGGATTGTCCTCCTGTTCTGTCTCACAGGCCATGGCAAGAACCTCCTaGCTGTCCTTCGGAGCTACC | + |
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Preference number: 4 (lower is better) Translates to: RGWIALCWGLSSCSVSQAMARTS*LSFGAT Trigger: GGTAGCTCCGAAGGACAGCCAGGAGGTTCTTGCCAT...GGCCTGTGAGACAGAACAGGAGGACAATCCCCAACACAGGGCTATCCACCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR TCA 90 bp | TTTGTGGAGTTGCTGGGAAGAAGCAATTGTGGAGGGAGGGCTCAGAAGGTCAGCTCATCTTGGTGGTGGTaGGCCACTCATCCGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: FVELLGRSNCGGRAQKVSSSWWW*ATHPLP Trigger: GGGGAGCGGATGAGTGGCTCACCACCACCAAGATGA...GCTGACCTTCTGAGCCCTCCCTCCACAATTGCTTCTTCCCAGCAACTCCACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR CAA 72 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTTCGGAAGAGCAGTCGGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR GCA 90 bp | GATAGCCCTGTGTTGGGGATTGTCCTCCTGTTCTGTCTCACAGGCCAGTCACAGCTTCAGCTTCTGCGCTaGATGGGAAATAGCCGCACT | + |
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Preference number: 4 (lower is better) Translates to: DSPVLGIVLLFCLTGQSQLQLLR*MGNSRT Trigger: AGTGCGGCTATTTCCCATGCAGCGCAGAAGCTGAAG...CTGTGACTGGCCTGTGAGACAGAACAGGAGGACAATCCCCAACACAGGGCTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR CCA 90 bp | CAGAAGAGGGAGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCCCAAACAGCCAGGCCTaGTGCTTGGTCATCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: QKRESDLVTDGCEPPCGCPNSQA*CLVILV Trigger: CACCAAGATGACCAAGCACCAGGCCTGGCTGTTTGG...GCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACTCCCTCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR CCA 90 bp | TTTGTGGAGTTGCTGGGAAGAAGCAATTGTGGAGGGAGGGCTCAGAAGGTCAGCTTTCGTCCTGGCAGCTaGCTCTCCATCATCCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: FVELLGRSNCGGRAQKVSFRPGS*LSIIPF Trigger: AAACGGGATGATGGAGAGCCAGCTGCCAGGACGAAA...GCTGACCTTCTGAGCCCTCCCTCCACAATTGCTTCTTCCCAGCAACTCCACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR TCA 90 bp | TATTTGTGGAGTTGCTGGGAAGAAGCAATTGTGGAGGGAGGGCTCAGAAGGTCAGAAGACCTCAGTCAGTaGACTCGCTGCAAGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: YLWSCWEEAIVEGGLRRSEDLSQ*TRCKAE Trigger: CTCTGCCTTGCAGCGAGTTCACTGACTGAGGTCTTC...TGACCTTCTGAGCCCTCCCTCCACAATTGCTTCTTCCCAGCAACTCCACAAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR GCA 90 bp | TGGGAAGAAGCAATTGTGGAGGGAGGGCTCAGAAGGTCAGCAGTGGGAAGTTTTTCCTTCGGAGCTACCTaGTGTGAAGCCTTTTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: WEEAIVEGGLRRSAVGSFSFGAT*CEAFCP Trigger: GGGACAAAAGGCTTCACAGCAGGTAGCTCCGAAGGA...AAAACTTCCCACTGCTGACCTTCTGAGCCCTCCCTCCACAATTGCTTCTTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR GCA 90 bp | CAGAAGAGGGAGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTACTCCTTCAGCTTCTaGGCTGCATGGGAAATAGCC | + |
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Preference number: 4 (lower is better) Translates to: QKRESDLVTDGCEPPCGCYSFSF*AAWEIA Trigger: GGCTATTTCCCATGCAGCGCAGAAGCTGAAGGAGTA...GCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACTCCCTCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR TCA 90 bp | TTTATTTGTGGAGTTGCTGGGAAGAAGCAATTGTGGAGGGAGGGCTCAGAAGGTCCATCATCCCGTTTCTaGCACTCTCCAGGACAACGC | + |
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Preference number: 4 (lower is better) Translates to: FICGVAGKKQLWREGSEGPSSRF*HSPGQR Trigger: GCGTTGTCCTGGAGAGTGTCAGAAACGGGATGATGG...ACCTTCTGAGCCCTCCCTCCACAATTGCTTCTTCCCAGCAACTCCACAAATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR GCA 90 bp | TTTATTTGTGGAGTTGCTGGGAAGAAGCAATTGTGGAGGGAGGGCTCAGAAGGTAACAGCCAGGCCTGGTaGTTGGTCATCTTGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: FICGVAGKKQLWREGSEGNSQAW*LVILVV Trigger: CACCACCAAGATGACCAAGCACCAGGCCTGGCTGTT...ACCTTCTGAGCCCTCCCTCCACAATTGCTTCTTCCCAGCAACTCCACAAATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR GCA 90 bp | TTTATTTGTGGAGTTGCTGGGAAGAAGCAATTGTGGAGGGAGGGCTCAGAAGGTCCTCAGAGTCTGCACTaGCACCTGAAGCCGTATTTG | + |
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Preference number: 4 (lower is better) Translates to: FICGVAGKKQLWREGSEGPQSLH*HLKPYL Trigger: CAAATACGGCTTCAGGTGGCAGTGCAGACTCTGAGG...ACCTTCTGAGCCCTCCCTCCACAATTGCTTCTTCCCAGCAACTCCACAAATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR GCA 90 bp | CACCCAGTTGAACCCTATGTTAAATACTTTGAAAGTCCTTTATTTGTGGAGTTGGGTCCAAATCCAGTCTaGTCCAAACAGCCAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: HPVEPYVKYFESPLFVELGPNPV*SKQPGL Trigger: CAGGCCTGGCTGTTTGGAGCAGACTGGATTTGGACC...CAACTCCACAAATAAAGGACTTTCAAAGTATTTAACATAGGGTTCAACTGGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR GCA 90 bp | TTTATTTGTGGAGTTGCTGGGAAGAAGCAATTGTGGAGGGAGGGCTCAGAAGGTAAGTTACAGAACTCTTaGAGCTTGTCAAATCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: FICGVAGKKQLWREGSEGKLQNS*SLSNLP Trigger: AGGCAGATTTGACAAGCTGCAAGAGTTCTGTAACTT...ACCTTCTGAGCCCTCCCTCCACAATTGCTTCTTCCCAGCAACTCCACAAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR CAA 72 bp | TATGTTAAATACTTTGAAAGTCCTTTATTTGTGGAGTaGCTGGGAAGAAGCAATTGTGGAGGGAGGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: YVKYFESPLFVE*LGRSNCGGRAQ Trigger: CTGAGCCCTCCCTCCACAATTGCTTCTTCCCAGCAACTCCACAAATAAAGGACTTTCAAAGTATTTAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| 3UTR CAA 72 bp | GGTGACTCAGTAACTCATGGTATAGCTAACACCCAGTaGAACCCTATGTTAAATACTTTGAAAGTCCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: GDSVTHGIANTQ*NPMLNTLKVLY Trigger: ATAAAGGACTTTCAAAGTATTTAACATAGGGTTCAACTGGGTGTTAGCTATACCATGAGTTACTGAGTCACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS CCA 90 bp | GGTCCCCAGAAGGTCCAAATCCAGTCTGCTCCAAACAGCCAGGCCTaGTGCTTGGTCATCTTGGTGGTGGTGAGCCACTCATCCGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: GPQKVQIQSAPNSQA*CLVILVVVSHSSAP Trigger: GGGAGCGGATGAGTGGCTCACCACCACCAAGATGACCAAGCACCAGGCCTGGCTGTTTGGAGCAGACTGGATTTGGACCTTCTGGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS GCA 90 bp | GGACGAGGAAGACCTCAGTCAGTGAACTCGCTGCAAGGCAGAGTCTaGTCAGCGGATACTCAAACCCGAGGTACTCCTTCAGCTTCTGCG | + |
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Preference number: 5 (lower is better) Translates to: GRGRPQSVNSLQGRV*SADTQTRGTPSASA Trigger: CGCAGAAGCTGAAGGAGTACCTCGGGTTTGAGTATCCGCTGAGCAGACTCTGCCTTGCAGCGAGTTCACTGACTGAGGTCTTCCTCGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS CCA 90 bp | GTGAGCCACTCATCCGCTCCCCTTTCCTGGCAGAAGGTAACGAAGTaGACGAGGAAGACCTCAGTCAGTGAACTCGCTGCAAGGCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: VSHSSAPLSWQKVTK*TRKTSVSELAARQS Trigger: ACTCTGCCTTGCAGCGAGTTCACTGACTGAGGTCTTCCTCGTCCACTTCGTTACCTTCTGCCAGGAAAGGGGAGCGGATGAGTGGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS TCA 90 bp | TCCGTCAGAGGGAGCGAAGCCATCCTCAGAGTCTGCACTGCCACCTaGAGCCGTATTTGCTTATCAGGTCCCCAGAAGGTCCAAATCCAG | + |
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Preference number: 5 (lower is better) Translates to: SVRGSEAILRVCTAT*SRICLSGPQKVQIQ Trigger: CTGGATTTGGACCTTCTGGGGACCTGATAAGCAAATACGGCTTCAGGTGGCAGTGCAGACTCTGAGGATGGCTTCGCTCCCTCTGACGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS GCA 90 bp | GCTCAGCGGATACTCAAACCCGAGGTACTCCTTCAGCTTCTGCGCTaGATGGGAAATAGCCGCACTGACCACCTCACACATGGCAAGAAC | + |
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Preference number: 5 (lower is better) Translates to: AQRILKPEVLLQLLR*MGNSRTDHLTHGKN Trigger: GTTCTTGCCATGTGTGAGGTGGTCAGTGCGGCTATTTCCCATGCAGCGCAGAAGCTGAAGGAGTACCTCGGGTTTGAGTATCCGCTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS GCA 90 bp | AGTCTGCTCAGCGGATACTCAAACCCGAGGTACTCCTTCAGCTTCTaGGCTGCATGGGAAATAGCCGCACTGACCACCTCACACATGGCA | + |
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Preference number: 5 (lower is better) Translates to: SLLSGYSNPRYSFSF*AAWEIAALTTSHMA Trigger: TGCCATGTGTGAGGTGGTCAGTGCGGCTATTTCCCATGCAGCGCAGAAGCTGAAGGAGTACCTCGGGTTTGAGTATCCGCTGAGCAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS CCA 90 bp | AGCGGATACTCAAACCCGAGGTACTCCTTCAGCTTCTGCGCTGCATaGGAAATAGCCGCACTGACCACCTCACACATGGCAAGAACCTCC | + |
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Preference number: 5 (lower is better) Translates to: SGYSNPRYSFSFCAA*EIAALTTSHMARTS Trigger: GGAGGTTCTTGCCATGTGTGAGGTGGTCAGTGCGGCTATTTCCCATGCAGCGCAGAAGCTGAAGGAGTACCTCGGGTTTGAGTATCCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR CAA 90 bp | GATAGCCCTGTGTTGGGGATTGTCCTCCTGTTCTGTCTCACAGGCCAGTCACAGTGGTGCTTGGTCATCTaGGTGGTGGTGAGCCACTCA | + |
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Preference number: 5 (lower is better) Translates to: DSPVLGIVLLFCLTGQSQWCLVI*VVVSHS Trigger: TGAGTGGCTCACCACCACCAAGATGACCAAGCACCA...CTGTGACTGGCCTGTGAGACAGAACAGGAGGACAATCCCCAACACAGGGCTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS TCA 90 bp | TTCCTGGCAGAAGGTAACGAAGTGGACGAGGAAGACCTCAGTCAGTaGACTCGCTGCAAGGCAGAGTCTGCTCAGCGGATACTCAAACCC | + |
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Preference number: 5 (lower is better) Translates to: FLAEGNEVDEEDLSQ*TRCKAESAQRILKP Trigger: GGGTTTGAGTATCCGCTGAGCAGACTCTGCCTTGCAGCGAGTTCACTGACTGAGGTCTTCCTCGTCCACTTCGTTACCTTCTGCCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS CCA 90 bp | TTGGTCATCTTGGTGGTGGTGAGCCACTCATCCGCTCCCCTTTCCTaGCAGAAGGTAACGAAGTGGACGAGGAAGACCTCAGTCAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: LVILVVVSHSSAPLS*QKVTKWTRKTSVSE Trigger: TTCACTGACTGAGGTCTTCCTCGTCCACTTCGTTACCTTCTGCCAGGAAAGGGGAGCGGATGAGTGGCTCACCACCACCAAGATGACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS CCA 90 bp | TTTGTTTCCAGCACAAACTGCTCCACAGCCTTTCGTCCTGGCAGCTaGCTCTCCATCATCCCGTTTCTGACACTCTCCAGGACAACGCCT | + |
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Preference number: 5 (lower is better) Translates to: FVSSTNCSTAFRPGS*LSIIPFLTLSRTTP Trigger: AGGCGTTGTCCTGGAGAGTGTCAGAAACGGGATGATGGAGAGCCAGCTGCCAGGACGAAAGGCTGTGGAGCAGTTTGTGCTGGAAACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS GCA 90 bp | AAGCCGTATTTGCTTATCAGGTCCCCAGAAGGTCCAAATCCAGTCTaGTCCAAACAGCCAGGCCTGGTGCTTGGTCATCTTGGTGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: KPYLLIRSPEGPNPV*SKQPGLVLGHLGGG Trigger: ACCACCACCAAGATGACCAAGCACCAGGCCTGGCTGTTTGGAGCAGACTGGATTTGGACCTTCTGGGGACCTGATAAGCAAATACGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS GCA 90 bp | AGCAGCTCTTTGATGGAGATACAGTCCTTTGTTTCCAGCACAAACTaGTCCACAGCCTTTCGTCCTGGCAGCTGGCTCTCCATCATCCCG | + |
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Preference number: 5 (lower is better) Translates to: SSSLMEIQSFVSSTN*STAFRPGSWLSIIP Trigger: CGGGATGATGGAGAGCCAGCTGCCAGGACGAAAGGCTGTGGAGCAGTTTGTGCTGGAAACAAAGGACTGTATCTCCATCAAAGAGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR CAA 90 bp | TTTATTTGTGGAGTTGCTGGGAAGAAGCAATTGTGGAGGGAGGGCTCAGAAGGTAGCCAGGCCTGGTGCTaGGTCATCTTGGTGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: FICGVAGKKQLWREGSEGSQAWC*VILVVV Trigger: CACCACCACCAAGATGACCAAGCACCAGGCCTGGCT...ACCTTCTGAGCCCTCCCTCCACAATTGCTTCTTCCCAGCAACTCCACAAATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR CAA 90 bp | TGGGAAGAAGCAATTGTGGAGGGAGGGCTCAGAAGGTCAGCAGTGGGAAGTTTTAAGACTCCTCTCCCCTaGACTCACAGGATTTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: WEEAIVEGGLRRSAVGSFKTPLP*THRILG Trigger: ACCCAAAATCCTGTGAGTCAAGGGGAGAGGAGTCTT...AAAACTTCCCACTGCTGACCTTCTGAGCCCTCCCTCCACAATTGCTTCTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR CAA 90 bp | GATAGCCCTGTGTTGGGGATTGTCCTCCTGTTCTGTCTCACAGGCCAGTCACAGTTCCCTAGCAGCTCTTaGATGGAGATACAGTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: DSPVLGIVLLFCLTGQSQFPSSS*MEIQSF Trigger: AAAGGACTGTATCTCCATCAAAGAGCTGCTAGGGAA...CTGTGACTGGCCTGTGAGACAGAACAGGAGGACAATCCCCAACACAGGGCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR CAA 90 bp | TTTGTGGAGTTGCTGGGAAGAAGCAATTGTGGAGGGAGGGCTCAGAAGGTCAGCCAAGTTACAGAACTCTaGCAGCTTGTCAAATCTGCC | + |
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Preference number: 5 (lower is better) Translates to: FVELLGRSNCGGRAQKVSQVTEL*QLVKSA Trigger: GGCAGATTTGACAAGCTGCAAGAGTTCTGTAACTTG...GCTGACCTTCTGAGCCCTCCCTCCACAATTGCTTCTTCCCAGCAACTCCACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS-3UTR CAA 90 bp | CACCCAGTTGAACCCTATGTTAAATACTTTGAAAGTCCTTTATTTGTGGAGTTGTTGACTCACAGGATTTaGGGTCCGTCAGAGGGAGCG | + |
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Preference number: 5 (lower is better) Translates to: HPVEPYVKYFESPLFVELLTHRI*GPSEGA Trigger: CGCTCCCTCTGACGGACCCAAAATCCTGTGAGTCAA...CAACTCCACAAATAAAGGACTTTCAAAGTATTTAACATAGGGTTCAACTGGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS CAA 72 bp | TCTGCTCCAAACAGCCAGGCCTGGTGCTTGGTCATCTaGGTGGTGGTGAGCCACTCATCCGCTCCCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SAPNSQAWCLVI*VVVSHSSAPLS Trigger: GGAAAGGGGAGCGGATGAGTGGCTCACCACCACCAAGATGACCAAGCACCAGGCCTGGCTGTTTGGAGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS GCA 72 bp | CGTCAGAGGGAGCGAAGCCATCCTCAGAGTCTGCACTaGCACCTGAAGCCGTATTTGCTTATCAGGTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: RQRERSHPQSLH*HLKPYLLIRSP Trigger: TGGGGACCTGATAAGCAAATACGGCTTCAGGTGGCAGTGCAGACTCTGAGGATGGCTTCGCTCCCTCTGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS CCA 72 bp | TTGGTGGTGGTGAGCCACTCATCCGCTCCCCTTTCCTaGCAGAAGGTAACGAAGTGGACGAGGAAGACCTCA | + |
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Preference number: 6 (lower is better) Translates to: LVVVSHSSAPLS*QKVTKWTRKTS Trigger: TGAGGTCTTCCTCGTCCACTTCGTTACCTTCTGCCAGGAAAGGGGAGCGGATGAGTGGCTCACCACCACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS GCA 72 bp | AGCGGATACTCAAACCCGAGGTACTCCTTCAGCTTCTaGGCTGCATGGGAAATAGCCGCACTGACCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: SGYSNPRYSFSF*AAWEIAALTTS Trigger: TGAGGTGGTCAGTGCGGCTATTTCCCATGCAGCGCAGAAGCTGAAGGAGTACCTCGGGTTTGAGTATCCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS CCA 72 bp | TCAAACCCGAGGTACTCCTTCAGCTTCTGCGCTGCATaGGAAATAGCCGCACTGACCACCTCACACATGGCA | + |
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Preference number: 6 (lower is better) Translates to: SNPRYSFSFCAA*EIAALTTSHMA Trigger: TGCCATGTGTGAGGTGGTCAGTGCGGCTATTTCCCATGCAGCGCAGAAGCTGAAGGAGTACCTCGGGTTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS CCA 72 bp | TCATCCGCTCCCCTTTCCTGGCAGAAGGTAACGAAGTaGACGAGGAAGACCTCAGTCAGTGAACTCGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SSAPLSWQKVTK*TRKTSVSELAA Trigger: TGCAGCGAGTTCACTGACTGAGGTCTTCCTCGTCCACTTCGTTACCTTCTGCCAGGAAAGGGGAGCGGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS TCA 72 bp | GAAGGTAACGAAGTGGACGAGGAAGACCTCAGTCAGTaGACTCGCTGCAAGGCAGAGTCTGCTCAGCGGATA | + |
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Preference number: 6 (lower is better) Translates to: EGNEVDEEDLSQ*TRCKAESAQRI Trigger: TATCCGCTGAGCAGACTCTGCCTTGCAGCGAGTTCACTGACTGAGGTCTTCCTCGTCCACTTCGTTACCTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS GCA 72 bp | AGACCTCAGTCAGTGAACTCGCTGCAAGGCAGAGTCTaGTCAGCGGATACTCAAACCCGAGGTACTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RPQSVNSLQGRV*SADTQTRGTPS Trigger: TGAAGGAGTACCTCGGGTTTGAGTATCCGCTGAGCAGACTCTGCCTTGCAGCGAGTTCACTGACTGAGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS CCA 72 bp | TGTTTCCAGCACAAACTGCTCCACAGCCTTTCGTCCTaGCAGCTGGCTCTCCATCATCCCGTTTCTGACACT | + |
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Preference number: 6 (lower is better) Translates to: CFQHKLLHSLSS*QLALHHPVSDT Trigger: AGTGTCAGAAACGGGATGATGGAGAGCCAGCTGCCAGGACGAAAGGCTGTGGAGCAGTTTGTGCTGGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS CAA 90 bp | GAGCGAAGCCATCCTCAGAGTCTGCACTGCCACCTGAAGCCGTATTaGCTTATCAGGTCCCCAGAAGGTCCAAATCCAGTCTGCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: ERSHPQSLHCHLKPY*LIRSPEGPNPVCSK Trigger: TTTGGAGCAGACTGGATTTGGACCTTCTGGGGACCTGATAAGCAAATACGGCTTCAGGTGGCAGTGCAGACTCTGAGGATGGCTTCGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS GCA 72 bp | ATACTCAAACCCGAGGTACTCCTTCAGCTTCTGCGCTaGATGGGAAATAGCCGCACTGACCACCTCACACAT | + |
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Preference number: 6 (lower is better) Translates to: ILKPEVLLQLLR*MGNSRTDHLTH Trigger: ATGTGTGAGGTGGTCAGTGCGGCTATTTCCCATGCAGCGCAGAAGCTGAAGGAGTACCTCGGGTTTGAGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS GCA 72 bp | TTGATGGAGATACAGTCCTTTGTTTCCAGCACAAACTaGTCCACAGCCTTTCGTCCTGGCAGCTGGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LMEIQSFVSSTN*STAFRPGSWLS Trigger: GGAGAGCCAGCTGCCAGGACGAAAGGCTGTGGAGCAGTTTGTGCTGGAAACAAAGGACTGTATCTCCATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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| CDS CAA 72 bp | CATCCTCAGAGTCTGCACTGCCACCTGAAGCCGTATTaGCTTATCAGGTCCCCAGAAGGTCCAAATCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: HPQSLHCHLKPY*LIRSPEGPNPV Trigger: GACTGGATTTGGACCTTCTGGGGACCTGATAAGCAAATACGGCTTCAGGTGGCAGTGCAGACTCTGAGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036194.6 |
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