Pregenerated sensors for RENBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031387Ensembl transcript IDs: ENSMUST00000114379.8, ENSMUST00000116578.8, ENSMUST00000155597.2, ENSMUST00000165359.3
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGGTGTAGAAGCACTCGCTGAAAATGGTCCGCTGCACCTTCACTaGCCGGCCATCCCGAGTCAGCACAAAAGCACATTTCTTGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: HGVEALAENGPLHLH*PAIPSQHKSTFLAR Trigger: CCTGGCAAGAAATGTGCTTTTGTGCTGACTCGGGATGGCCGGCCAGTGAAGGTGCAGCGGACCATTTTCAGCGAGTGCTTCTACACCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165359.3 |
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| 3UTR TCA 90 bp | TTACTTTCCACAGTTCATTCATGGCCATGGTGTAGAAGCACTCGCTaGAAATGGTCCGCTGCACCTTCACTGGCCGGCCATCCCGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: LLSTVHSWPWCRSTR*KWSAAPSLAGHPES Trigger: TGACTCGGGATGGCCGGCCAGTGAAGGTGCAGCGGACCATTTTCAGCGAGTGCTTCTACACCATGGCCATGAATGAACTGTGGAAAGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165359.3 |
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| 3UTR-3UTR GCA 90 bp | AATGGTCCGCTGCACCTTCACTGGCCGGCCATCCCGAGTCAGCACAAAAGCACATTTCTTGCCAGGTGGTaGCACCCGGGCATAACGCAG | + |
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Preference number: 2 (lower is better) Translates to: NGPLHLHWPAIPSQHKSTFLARW*HPGITQ Trigger: CTGCGTTATGCCCGGGTGGCACCACCTGGCAAGAAA...TGTGCTTTTGTGCTGACTCGGGATGGCCGGCCAGTGAAGGTGCAGCGGACCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165359.3 |
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| 3UTR-3UTR CCA 90 bp | CCATCATCTCTATGGCTTCACTCTGATAACGCACTTCCCCCGTTACTTTCCACAACATTTCTTGCCAGGTaGTGCCACCCGGGCATAACG | + |
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Preference number: 2 (lower is better) Translates to: PSSLWLHSDNALPPLLSTTFLAR*CHPGIT Trigger: CGTTATGCCCGGGTGGCACCACCTGGCAAGAAATGT...TGTGGAAAGTAACGGGGGAAGTGCGTTATCAGAGTGAAGCCATAGAGATGATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165359.3 |
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| 3UTR-3UTR CAA 90 bp | GAAGCACTCGCTGAAAATGGTCCGCTGCACCTTCACTGGCCGGCCATCCCGAGTACAAAAGCACATTTCTaGCCAGGTGGTGCCACCCGG | + |
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Preference number: 3 (lower is better) Translates to: EALAENGPLHLHWPAIPSTKAHF*PGGATR Trigger: CCGGGTGGCACCACCTGGCAAGAAATGTGCTTTTGT...ACTCGGGATGGCCGGCCAGTGAAGGTGCAGCGGACCATTTTCAGCGAGTGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165359.3 |
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| 3UTR CCA 72 bp | GAAGCACTCGCTGAAAATGGTCCGCTGCACCTTCACTaGCCGGCCATCCCGAGTCAGCACAAAAGCACATTT | + |
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Preference number: 3 (lower is better) Translates to: EALAENGPLHLH*PAIPSQHKSTF Trigger: AAATGTGCTTTTGTGCTGACTCGGGATGGCCGGCCAGTGAAGGTGCAGCGGACCATTTTCAGCGAGTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165359.3 |
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| 3UTR TCA 72 bp | ACAGTTCATTCATGGCCATGGTGTAGAAGCACTCGCTaGAAATGGTCCGCTGCACCTTCACTGGCCGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: TVHSWPWCRSTR*KWSAAPSLAGH Trigger: ATGGCCGGCCAGTGAAGGTGCAGCGGACCATTTTCAGCGAGTGCTTCTACACCATGGCCATGAATGAACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165359.3 |
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| CDS-3UTR GCA 90 bp | CTGAGGCCGGCCCAACCCAGCCGGGTCCTCCCGTACCCAGTGGATGATCTGATCCGCTTCTTCCAGACCTaGAGTGTCTCCCGTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LRPAQPSRVLPYPVDDLIRFFQT*SVSRSF Trigger: GAAGGAACGGGAGACACTGCAGGTCTGGAAGAAGCG...GATCAGATCATCCACTGGGTACGGGAGGACCCGGCTGGGTTGGGCCGGCCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165359.3 |
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| CDS-3UTR GCA 90 bp | CTGAGGCCGGCCCAACCCAGCCGGGTCCTCCCGTACCCAGTGGATGATCTGATCTCCTGGTCATGGGAATaGTCCATCCAGAAAGCGATC | + |
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Preference number: 4 (lower is better) Translates to: LRPAQPSRVLPYPVDDLISWSWE*SIQKAI Trigger: GATCGCTTTCTGGATGGAGCATTCCCATGACCAGGA...GATCAGATCATCCACTGGGTACGGGAGGACCCGGCTGGGTTGGGCCGGCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165359.3 |
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| CDS-3UTR CCA 90 bp | ACGCACTTCCCCCGTTACTTTCCACAGTTCATTCATGGCCATGGTGTAGAAGCACCGTGTTCCTGGTCATaGGAATGCTCCATCCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: THFPRYFPQFIHGHGVEAPCSWS*ECSIQK Trigger: TTTCTGGATGGAGCATTCCCATGACCAGGAACACGG...TGCTTCTACACCATGGCCATGAATGAACTGTGGAAAGTAACGGGGGAAGTGCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165359.3 |
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| CDS GCA 90 bp | CCGGCCATCCCGAGTCAGCACAAAAGCACATTTCTTGCCAGGTGGTaGCACCCGGGCATAACGCAGCAAAAATTCACCACCTGCTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: PAIPSQHKSTFLARW*HPGITQQKFTTCSC Trigger: GCAAGAGCAGGTGGTGAATTTTTGCTGCGTTATGCCCGGGTGGCACCACCTGGCAAGAAATGTGCTTTTGTGCTGACTCGGGATGGCCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS GCA 90 bp | CCTTCACTGGCCGGCCATCCCGAGTCAGCACAAAAGCACATTTCTTaGCAGGTGGTGCCACCCGGGCATAACGCAGCAAAAATTCACCAC | + |
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Preference number: 5 (lower is better) Translates to: PSLAGHPESAQKHIS*QVVPPGHNAAKIHH Trigger: GTGGTGAATTTTTGCTGCGTTATGCCCGGGTGGCACCACCTGGCAAGAAATGTGCTTTTGTGCTGACTCGGGATGGCCGGCCAGTGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS CCA 90 bp | TGGCCGGCCATCCCGAGTCAGCACAAAAGCACATTTCTTGCCAGGTaGTGCCACCCGGGCATAACGCAGCAAAAATTCACCACCTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: WPAIPSQHKSTFLAR*CHPGITQQKFTTCS Trigger: AGAGCAGGTGGTGAATTTTTGCTGCGTTATGCCCGGGTGGCACCACCTGGCAAGAAATGTGCTTTTGTGCTGACTCGGGATGGCCGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS GCA 90 bp | CTCTTGCTGCATCCAGAAGCTCAACACGGCGGAAGCGCTCAAAACTaGGGTATAAGCGACAATACATCCATACCTGCCTCCCCTGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LLLHPEAQHGGSAQN*GISDNTSIPASPAA Trigger: GGCTGCAGGGGAGGCAGGTATGGATGTATTGTCGCTTATACCGCAGTTTTGAGCGCTTCCGCCGTGTTGAGCTTCTGGATGCAGCAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS CCA 90 bp | GAGGGCATACTGGAGCAGAAACCAGCCAGCTTCCAGTGTGTGGCCTaGGTTCTGATGTCTTCCAAGGCAACCAGGAAGCTCTTTTCCATC | + |
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Preference number: 5 (lower is better) Translates to: EGILEQKPASFQCVA*VLMSSKATRKLFSI Trigger: GATGGAAAAGAGCTTCCTGGTTGCCTTGGAAGACATCAGAACCCAGGCCACACACTGGAAGCTGGCTGGTTTCTGCTCCAGTATGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS TCA 90 bp | AGAAGAGATGCAGCAAGGCAGGGTCCCCACTGTCACTATAACCCATaGGGAAGGCAATCATGGCTTCACTGTGTGGCCACCACAGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: RRDAARQGPHCHYNP*GRQSWLHCVATTAS Trigger: TGAAGCTGTGGTGGCCACACAGTGAAGCCATGATTGCCTTCCTCATGGGTTATAGTGACAGTGGGGACCCTGCCTTGCTGCATCTCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS GCA 90 bp | CTCTTGCTGCATCCAGAAGCTCAACACGGCGGAAGCGCTCAAAACTaGGGTATAAGCGACAATACATCCATACCTTCCCATCACGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: LLLHPEAQHGGSAQN*GISDNTSIPSHHGQ Trigger: TTGGCCGTGATGGGAAGGTATGGATGTATTGTCGCTTATACCGCAGTTTTGAGCGCTTCCGCCGTGTTGAGCTTCTGGATGCAGCAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114379.8 |
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| CDS CCA 90 bp | ACTGTCACTATAACCCATGAGGAAGGCAATCATGGCTTCACTGTGTaGCCACCACAGCTTCATGTTCCATTCCAGCTGGGTAGGGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: TVTITHEEGNHGFTV*PPQLHVPFQLGRAE Trigger: CTCTGCCCTACCCAGCTGGAATGGAACATGAAGCTGTGGTGGCCACACAGTGAAGCCATGATTGCCTTCCTCATGGGTTATAGTGACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS TCA 90 bp | ATAAGCGACAATACATCCATACCTTCCCATCACGGCCAAGACATGTaGAGAAGCCCCCGTGTTCCTGGTCATGGGAATGCTCCATCCAGA | + |
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Preference number: 5 (lower is better) Translates to: ISDNTSIPSHHGQDM*RSPRVPGHGNAPSR Trigger: TCTGGATGGAGCATTCCCATGACCAGGAACACGGGGGCTTCTTCACATGTCTTGGCCGTGATGGGAAGGTATGGATGTATTGTCGCTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114379.8 |
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| CDS TCA 90 bp | GTTCTGATGTCTTCCAAGGCAACCAGGAAGCTCTTTTCCATCCTCTaGTACATTCTCCAGTACAACTTGTCCATCCCTCTGGACATGCTG | + |
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Preference number: 5 (lower is better) Translates to: VLMSSKATRKLFSIL*YILQYNLSIPLDML Trigger: CAGCATGTCCAGAGGGATGGACAAGTTGTACTGGAGAATGTATCAGAGGATGGAAAAGAGCTTCCTGGTTGCCTTGGAAGACATCAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS GCA 72 bp | GCGGGCTCAAGGCGTTGGAGTAGGGCTCCTAGAATCTaGTCGCACATGGCCAGGCACCGCGGCACATGGAAG | + |
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Preference number: 6 (lower is better) Translates to: AGSRRWSRAPRI*SHMARHRGTWK Trigger: CTTCCATGTGCCGCGGTGCCTGGCCATGTGCGAGCAGATTCTAGGAGCCCTACTCCAACGCCTTGAGCCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS GCA 72 bp | CCGGGCATAACGCAGCAAAAATTCACCACCTGCTCTTaGTGCATCCAGAAGCTCAACACGGCGGAAGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: PGITQQKFTTCS*CIQKLNTAEAL Trigger: GAGCGCTTCCGCCGTGTTGAGCTTCTGGATGCAGCAAGAGCAGGTGGTGAATTTTTGCTGCGTTATGCCCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS CCA 72 bp | AGAATCTGCTCGCACATGGCCAGGCACCGCGGCACATaGAAGCAGCCTTTAAAAGGACCTCCCTTGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: RICSHMARHRGT*KQPLKGPPLMV Trigger: CACCATCAAGGGAGGTCCTTTTAAAGGCTGCTTCCATGTGCCGCGGTGCCTGGCCATGTGCGAGCAGATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS CAA 72 bp | CCCGGGCATAACGCAGCAAAAATTCACCACCTGCTCTaGCTGCATCCAGAAGCTCAACACGGCGGAAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: PGHNAAKIHHLL*LHPEAQHGGSA Trigger: AGCGCTTCCGCCGTGTTGAGCTTCTGGATGCAGCAAGAGCAGGTGGTGAATTTTTGCTGCGTTATGCCCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS CAA 72 bp | CGCGGCACATGGAAGCAGCCTTTAAAAGGACCTCCCTaGATGGTGAGGGCCACCTTTCCCTCTTGGTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: RGTWKQPLKGPP*MVRATFPSWFR Trigger: CCTGAACCAAGAGGGAAAGGTGGCCCTCACCATCAAGGGAGGTCCTTTTAAAGGCTGCTTCCATGTGCCGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS GCA 72 bp | TGCCACCCGGGCATAACGCAGCAAAAATTCACCACCTaGTCTTGCTGCATCCAGAAGCTCAACACGGCGGAA | + |
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Preference number: 6 (lower is better) Translates to: CHPGITQQKFTT*SCCIQKLNTAE Trigger: TTCCGCCGTGTTGAGCTTCTGGATGCAGCAAGAGCAGGTGGTGAATTTTTGCTGCGTTATGCCCGGGTGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS GCA 72 bp | CCGAGTCAGCACAAAAGCACATTTCTTGCCAGGTGGTaGCACCCGGGCATAACGCAGCAAAAATTCACCACC | + |
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Preference number: 6 (lower is better) Translates to: PSQHKSTFLARW*HPGITQQKFTT Trigger: GGTGGTGAATTTTTGCTGCGTTATGCCCGGGTGGCACCACCTGGCAAGAAATGTGCTTTTGTGCTGACTCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS CCA 72 bp | ATTCGAAGTTTGGGGTCACCTTTCCTGAGGGCATACTaGAGCAGAAACCAGCCAGCTTCCAGTGTGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: IRSLGSPFLRAY*SRNQPASSVWP Trigger: AGGCCACACACTGGAAGCTGGCTGGTTTCTGCTCCAGTATGCCCTCAGGAAAGGTGACCCCAAACTTCGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS GCA 72 bp | CATGTGAAGAAGCCCCCGTGTTCCTGGTCATGGGAATaGTCCATCCAGAAAGCGATCACACGATCAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: HVKKPPCSWSWE*SIQKAITRSSS Trigger: AGAGCTTGATCGTGTGATCGCTTTCTGGATGGAGCATTCCCATGACCAGGAACACGGGGGCTTCTTCACATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS GCA 72 bp | CATCCAGAAGCTCAACACGGCGGAAGCGCTCAAAACTaGGGTATAAGCGACAATACATCCATACCTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: HPEAQHGGSAQN*GISDNTSIPAS Trigger: GGAGGCAGGTATGGATGTATTGTCGCTTATACCGCAGTTTTGAGCGCTTCCGCCGTGTTGAGCTTCTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS GCA 72 bp | GGCATAACGCAGCAAAAATTCACCACCTGCTCTTGCTaGATCCAGAAGCTCAACACGGCGGAAGCGCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: GITQQKFTTCSC*IQKLNTAEALK Trigger: TTTGAGCGCTTCCGCCGTGTTGAGCTTCTGGATGCAGCAAGAGCAGGTGGTGAATTTTTGCTGCGTTATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS CCA 72 bp | CCAAGACATGTGAAGAAGCCCCCGTGTTCCTGGTCATaGGAATGCTCCATCCAGAAAGCGATCACACGATCA | + |
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Preference number: 6 (lower is better) Translates to: PRHVKKPPCSWS*ECSIQKAITRS Trigger: TGATCGTGTGATCGCTTTCTGGATGGAGCATTCCCATGACCAGGAACACGGGGGCTTCTTCACATGTCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS CCA 72 bp | ATCCCGAGTCAGCACAAAAGCACATTTCTTGCCAGGTaGTGCCACCCGGGCATAACGCAGCAAAAATTCACC | + |
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Preference number: 6 (lower is better) Translates to: IPSQHKSTFLAR*CHPGITQQKFT Trigger: GGTGAATTTTTGCTGCGTTATGCCCGGGTGGCACCACCTGGCAAGAAATGTGCTTTTGTGCTGACTCGGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS CAA 90 bp | GCCTTTAAAAGGACCTCCCTTGATGGTGAGGGCCACCTTTCCCTCTaGGTTCAGGTAGCCAAACCATTCCCCATACTCAGGATCACGAAA | + |
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Preference number: 6 (lower is better) Translates to: AFKRTSLDGEGHLSL*VQVAKPFPILRITK Trigger: TTTCGTGATCCTGAGTATGGGGAATGGTTTGGCTACCTGAACCAAGAGGGAAAGGTGGCCCTCACCATCAAGGGAGGTCCTTTTAAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS CCA 72 bp | ATAACCCATGAGGAAGGCAATCATGGCTTCACTGTGTaGCCACCACAGCTTCATGTTCCATTCCAGCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: ITHEEGNHGFTV*PPQLHVPFQLG Trigger: ACCCAGCTGGAATGGAACATGAAGCTGTGGTGGCCACACAGTGAAGCCATGATTGCCTTCCTCATGGGTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS CAA 72 bp | ATGCTCCATCCAGAAAGCGATCACACGATCAAGCTCTaGTTCCACACGCTTCTTCCAGACCTGCAGTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: MLHPESDHTIKL*FHTLLPDLQCL Trigger: GAGACACTGCAGGTCTGGAAGAAGCGTGTGGAACAAGAGCTTGATCGTGTGATCGCTTTCTGGATGGAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 ENSMUST00000165359.3 |
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| CDS TCA 72 bp | CATACCTGCCTCCCCTGCAGCCAAACATATTTGAGGTaGTCATATACCTTCCCATCACGGCCAAGACATGTG | + |
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Preference number: 6 (lower is better) Translates to: HTCLPCSQTYLR*SYTFPSRPRHV Trigger: CACATGTCTTGGCCGTGATGGGAAGGTATATGATCACCTCAAATATGTTTGGCTGCAGGGGAGGCAGGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS GCA 72 bp | CATCCAGAAGCTCAACACGGCGGAAGCGCTCAAAACTaGGGTATAAGCGACAATACATCCATACCTTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: HPEAQHGGSAQN*GISDNTSIPSH Trigger: ATGGGAAGGTATGGATGTATTGTCGCTTATACCGCAGTTTTGAGCGCTTCCGCCGTGTTGAGCTTCTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114379.8 |
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| CDS CAA 90 bp | CCATGTTCAGGGTCCCATCCAGAGTGGAAAGGCAATAAGAGAAACTaGTCAATGATGTGCATTCGAAGTTTGGGGTCACCTTTCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: PCSGSHPEWKGNKRN*SMMCIRSLGSPFLR Trigger: CCTCAGGAAAGGTGACCCCAAACTTCGAATGCACATCATTGACAAGTTTCTCTTATTGCCTTTCCACTCTGGATGGGACCCTGAACATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS CAA 90 bp | TGGAAAGGCAATAAGAGAAACTTGTCAATGATGTGCATTCGAAGTTaGGGGTCACCTTTCCTGAGGGCATACTGGAGCAGAAACCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: WKGNKRNLSMMCIRS*GSPFLRAYWSRNQP Trigger: TGGCTGGTTTCTGCTCCAGTATGCCCTCAGGAAAGGTGACCCCAAACTTCGAATGCACATCATTGACAAGTTTCTCTTATTGCCTTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS TCA 72 bp | TCTTCCAAGGCAACCAGGAAGCTCTTTTCCATCCTCTaGTACATTCTCCAGTACAACTTGTCCATCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SSKATRKLFSIL*YILQYNLSIPL Trigger: CAGAGGGATGGACAAGTTGTACTGGAGAATGTATCAGAGGATGGAAAAGAGCTTCCTGGTTGCCTTGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS CAA 72 bp | GGGTCCCATCCAGAGTGGAAAGGCAATAAGAGAAACTaGTCAATGATGTGCATTCGAAGTTTGGGGTCACCT | + |
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Preference number: 6 (lower is better) Translates to: GSHPEWKGNKRN*SMMCIRSLGSP Trigger: AGGTGACCCCAAACTTCGAATGCACATCATTGACAAGTTTCTCTTATTGCCTTTCCACTCTGGATGGGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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| CDS CAA 72 bp | AATAAGAGAAACTTGTCAATGATGTGCATTCGAAGTTaGGGGTCACCTTTCCTGAGGGCATACTGGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: NKRNLSMMCIRS*GSPFLRAYWSR Trigger: TCTGCTCCAGTATGCCCTCAGGAAAGGTGACCCCAAACTTCGAATGCACATCATTGACAAGTTTCTCTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114379.8 ENSMUST00000116578.8 ENSMUST00000155597.2 |
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