Pregenerated sensors for REM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022176Ensembl transcript IDs: ENSMUST00000164697.8, ENSMUST00000164766.8, ENSMUST00000168930.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGGCCGACGTCTCGATGTGCTTGCAGCTCAGCGTCCCAGCCAGATaGCGACCCTCTGCAGGAAGGGAACAGCAGCTAAGGCGCCCGTTG | + |
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Preference number: 1 (lower is better) Translates to: AADVSMCLQLSVPAR*RPSAGREQQLRRPL Trigger: CAACGGGCGCCTTAGCTGCTGTTCCCTTCCTGCAGAGGGTCGCCATCTGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR GCA 90 bp | GCTCACGAGTGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTGCTTaGAGCTCAGCGTCCCAGCCAGATGGCGACCCTCTGCAGGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: AHECCGGERPTSRCA*SSASQPDGDPLQEG Trigger: CCCTTCCTGCAGAGGGTCGCCATCTGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACACTCGTGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR GCA 90 bp | CTCGATGTGCTTGCAGCTCAGCGTCCCAGCCAGATGGCGACCCTCTaGAGGAAGGGAACAGCAGCTAAGGCGCCCGTTGGGCAGCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: LDVLAAQRPSQMATL*RKGTAAKAPVGQLC Trigger: GCAAAGCTGCCCAACGGGCGCCTTAGCTGCTGTTCCCTTCCTGCAGAGGGTCGCCATCTGGCTGGGACGCTGAGCTGCAAGCACATCGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR CCA 90 bp | CACCAGGGCATCCTGGGTATTTTTGGTTTCCTAGACGGACAGGAGTaGGGTGAGGGGGCGAGCGGAGGGCACGGTGACCATGGCGACTGC | + |
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Preference number: 1 (lower is better) Translates to: HQGILGIFGFLDGQE*GEGASGGHGDHGDC Trigger: GCAGTCGCCATGGTCACCGTGCCCTCCGCTCGCCCCCTCACCCCACTCCTGTCCGTCTAGGAAACCAAAAATACCCAGGATGCCCTGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| 3UTR GCA 90 bp | AAGAGCTCACGAGTGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTaGTTGCAGCTCAGCGTCCCAGCCAGATGGCGACCCTCTGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: KSSRVLWWRAADVSM*LQLSVPARWRPSAG Trigger: TCCTGCAGAGGGTCGCCATCTGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACACTCGTGAGCTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR GCA 90 bp | CTCTGCAGGAAGGGAACAGCAGCTAAGGCGCCCGTTGGGCAGCTTTaGCTGAGACTAGGGTGGGCTAGCACAGGTGGTGCGGGAAATGAG | + |
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Preference number: 1 (lower is better) Translates to: LCRKGTAAKAPVGQL*LRLGWASTGGAGNE Trigger: CTCATTTCCCGCACCACCTGTGCTAGCCCACCCTAGTCTCAGGCAAAGCTGCCCAACGGGCGCCTTAGCTGCTGTTCCCTTCCTGCAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR CCA 90 bp | CGGGCCAGGTCACTCTTATTTCCAACAAGGATGACAGGTAGGTCATaGTGGGGCCTCCCAGCCCGGAGCCGAAGAAGGGTTTCTGGAACT | + |
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Preference number: 1 (lower is better) Translates to: RARSLLFPTRMTGRS*WGLPARSRRRVSGT Trigger: AGTTCCAGAAACCCTTCTTCGGCTCCGGGCTGGGAGGCCCCACCATGACCTACCTGTCATCCTTGTTGGAAATAAGAGTGACCTGGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR CCA 90 bp | AGCACGGTTTTCTTCCCTGACTTGCAGGTCTTGAGGCTCTGTGAATaGTCGGCTGTTAAGACCAGGAGAGGTGGTGGTGGTGGACCTACC | + |
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Preference number: 1 (lower is better) Translates to: STVFFPDLQVLRLCE*SAVKTRRGGGGGPT Trigger: GGTAGGTCCACCACCACCACCTCTCCTGGTCTTAACAGCCGACCATTCACAGAGCCTCAAGACCTGCAAGTCAGGGAAGAAAACCGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| 3UTR TCA 90 bp | TGGAGATTTCAAGTACAGAATGGCTTTAGGATACACACCCTCCAGTaGTACCTCCCGGGAGCGGGCCAGGTCACTCTTATTTCCAACAAG | + |
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Preference number: 1 (lower is better) Translates to: WRFQVQNGFRIHTLQ*YLPGAGQVTLISNK Trigger: CTTGTTGGAAATAAGAGTGACCTGGCCCGCTCCCGGGAGGTATCACTGGAGGGTGTGTATCCTAAAGCCATTCTGTACTTGAAATCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR CCA 90 bp | AGCTCCATCCAGGAGGCTACAAAGCACTTTTTCGGTTCTAGTTTTTaGAGTGTCTTTCCGGGAGAGGTGGCTTCTTGCAAGTTAATAATA | + |
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Preference number: 1 (lower is better) Translates to: SSIQEATKHFFGSSF*SVFPGEVASCKLII Trigger: TATTATTAACTTGCAAGAAGCCACCTCTCCCGGAAAGACACTCCAAAAACTAGAACCGAAAAAGTGCTTTGTAGCCTCCTGGATGGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| 3UTR-3UTR TCA 90 bp | CGCTTAGCTTTCTTGGTGAGGCTCTCACGGCGCGTAGGCGGCGCGGGGCCGTCCCGCCGCAGCCTGATCTaGCGCACAGCACCCTCGAAG | + |
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Preference number: 2 (lower is better) Translates to: RLAFLVRLSRRVGGAGPSRRSLI*RTAPSK Trigger: CTTCGAGGGTGCTGTGCGTCAGATCAGGCTGCGGCG...GGACGGCCCCGCGCCGCCTACGCGCCGTGAGAGCCTCACCAAGAAAGCTAAGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR-3UTR TCA 90 bp | GCGCTTAGCTTTCTTGGTGAGGCTCTCACGGCGCGTAGGCGGCGCGGGGCCGTCATACACACCCTCCAGTaGTACCTCCCGGGAGCGGGC | + |
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Preference number: 2 (lower is better) Translates to: ALSFLGEALTARRRRGAVIHTLQ*YLPGAG Trigger: GCCCGCTCCCGGGAGGTATCACTGGAGGGTGTGTAT...GACGGCCCCGCGCCGCCTACGCGCCGTGAGAGCCTCACCAAGAAAGCTAAGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCGCTTAGCTTTCTTGGTGAGGCTCTCACGGCGCGTAGGCGGCGCGGGGCCGACGTCTCGATGTGCTTaGAGCTCAGCGTCCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: KRLAFLVRLSRRVGGAGPTSRCA*SSASQP Trigger: TGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGT...CGGCCCCGCGCCGCCTACGCGCCGTGAGAGCCTCACCAAGAAAGCTAAGCGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR CAA 90 bp | AGCTCACGAGTGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTGCTaGCAGCTCAGCGTCCCAGCCAGATGGCGACCCTCTGCAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: SSRVLWWRAADVSMC*QLSVPARWRPSAGR Trigger: CCTTCCTGCAGAGGGTCGCCATCTGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACACTCGTGAGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTCGGCTGTTAAGACCAGGAGAGGTGGTGGTGGTGGACCTACCAGCTACCCGCTAGACGGACAGGAGTaGGGTGAGGGGGCGAGCGGA | + |
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Preference number: 2 (lower is better) Translates to: WSAVKTRRGGGGGPTSYPLDGQE*GEGASG Trigger: TCCGCTCGCCCCCTCACCCCACTCCTGTCCGTCTAG...CGGGTAGCTGGTAGGTCCACCACCACCACCTCTCCTGGTCTTAACAGCCGACCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTGCTTGCAGCTCAGCGTCCCAGGTGGTGCGGGAAATaGGGGAGGGACCACCGAATC | + |
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Preference number: 2 (lower is better) Translates to: SVVVESGRRLDVLAAQRPRWCGK*GRDHRI Trigger: GATTCGGTGGTCCCTCCCTCATTTCCCGCACCACCT...GGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR-3UTR GCA 90 bp | CCGCTCACACCAGGGCATCCTGGGTATTTTTGGTTTCCTAGACGGACAGGAGTGGGTGACCATGGCGACTaGAGTGACCATGGCGACCGT | + |
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Preference number: 2 (lower is better) Translates to: PLTPGHPGYFWFPRRTGVGDHGD*SDHGDR Trigger: ACGGTCGCCATGGTCACTGCAGTCGCCATGGTCACC...CACTCCTGTCCGTCTAGGAAACCAAAAATACCCAGGATGCCCTGGTGTGAGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCACGAGTGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTGCTTGCAGCTGGGGTAAAAGGCCTATaGAGATTTCAAGTACAGAAT | + |
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Preference number: 2 (lower is better) Translates to: ELTSVVVESGRRLDVLAAGVKGL*RFQVQN Trigger: ATTCTGTACTTGAAATCTCCATAGGCCTTTTACCCC...AGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACACTCGTGAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR-3UTR TCA 90 bp | GTAAGTCAGAGTCCAATTTCAAGAATAACTTCCAGCCCTTTCTCTGAAGAACTTCTGACTTGCAGGTCTTaGGGCTCTGTGAATGGTCGG | + |
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Preference number: 2 (lower is better) Translates to: VSQSPISRITSSPFSEELLTCRS*GSVNGR Trigger: CCGACCATTCACAGAGCCTCAAGACCTGCAAGTCAG...AAGTTCTTCAGAGAAAGGGCTGGAAGTTATTCTTGAAATTGGACTCTGACTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| 3UTR-3UTR CCA 90 bp | ATAACCTTAAAGGAAACGTGCCATACTAGAATGGTAAGTCAGAGTCCAATTTCAGACCAGGAGAGGTGGTaGTGGTGGACCTACCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: ITLKETCHTRMVSQSPISDQERW*WWTYQL Trigger: TAGCTGGTAGGTCCACCACCACCACCTCTCCTGGTC...TGAAATTGGACTCTGACTTACCATTCTAGTATGGCACGTTTCCTTTAAGGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| 3UTR GCA 72 bp | CGAGTGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTaGTTGCAGCTCAGCGTCCCAGCCAGATGGCGACCC | + |
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Preference number: 3 (lower is better) Translates to: RVLWWRAADVSM*LQLSVPARWRP Trigger: GGGTCGCCATCTGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACACTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR GCA 72 bp | TGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTGCTTaGAGCTCAGCGTCCCAGCCAGATGGCGACCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: CCGGERPTSRCA*SSASQPDGDPL Trigger: CAGAGGGTCGCCATCTGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR CCA 72 bp | AAGGCGCCCGTTGGGCAGCTTTGCCTGAGACTAGGGTaGGCTAGCACAGGTGGTGCGGGAAATGAGGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: KAPVGQLCLRLG*ASTGGAGNEGG Trigger: CCCTCCCTCATTTCCCGCACCACCTGTGCTAGCCCACCCTAGTCTCAGGCAAAGCTGCCCAACGGGCGCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR CCA 72 bp | CGCACAGCACCCTCGAAGAGCTCACGAGTGTTGTGGTaGAGAGCGGCCGACGTCTCGATGTGCTTGCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: RTAPSKSSRVLW*RAADVSMCLQL Trigger: GAGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACACTCGTGAGCTCTTCGAGGGTGCTGTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR CCA 72 bp | ATCCTGGGTATTTTTGGTTTCCTAGACGGACAGGAGTaGGGTGAGGGGGCGAGCGGAGGGCACGGTGACCAT | + |
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Preference number: 3 (lower is better) Translates to: ILGIFGFLDGQE*GEGASGGHGDH Trigger: ATGGTCACCGTGCCCTCCGCTCGCCCCCTCACCCCACTCCTGTCCGTCTAGGAAACCAAAAATACCCAGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| 3UTR TCA 72 bp | CTTGCAGCACGGTTTTCTTCCCTGACTTGCAGGTCTTaGGGCTCTGTGAATGGTCGGCTGTTAAGACCAGGA | + |
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Preference number: 3 (lower is better) Translates to: LAARFSSLTCRS*GSVNGRLLRPG Trigger: TCCTGGTCTTAACAGCCGACCATTCACAGAGCCTCAAGACCTGCAAGTCAGGGAAGAAAACCGTGCTGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| 3UTR TCA 72 bp | CAAGTACAGAATGGCTTTAGGATACACACCCTCCAGTaGTACCTCCCGGGAGCGGGCCAGGTCACTCTTATT | + |
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Preference number: 3 (lower is better) Translates to: QVQNGFRIHTLQ*YLPGAGQVTLI Trigger: AATAAGAGTGACCTGGCCCGCTCCCGGGAGGTATCACTGGAGGGTGTGTATCCTAAAGCCATTCTGTACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR CCA 72 bp | CAGGAGGCTACAAAGCACTTTTTCGGTTCTAGTTTTTaGAGTGTCTTTCCGGGAGAGGTGGCTTCTTGCAAG | + |
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Preference number: 3 (lower is better) Translates to: QEATKHFFGSSF*SVFPGEVASCK Trigger: CTTGCAAGAAGCCACCTCTCCCGGAAAGACACTCCAAAAACTAGAACCGAAAAAGTGCTTTGTAGCCTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| 3UTR CCA 72 bp | CCAGCCCTTTCTCTGAAGAACTTCTTAAGGGCAAAGTaGACCAGGACAGAGGATAATTTTCAGTTATCTCTG | + |
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Preference number: 3 (lower is better) Translates to: PALSLKNFLRAK*TRTEDNFQLSL Trigger: CAGAGATAACTGAAAATTATCCTCTGTCCTGGTCCACTTTGCCCTTAAGAAGTTCTTCAGAGAAAGGGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| CDS-3UTR TCA 90 bp | CGGCCGACGTCTCGATGTGCTTGCAGCTCAGCGTCCCAGCCAGATGGCGACCCTAAGGGCTGCCTCCCCTaGGCCCAAGGAGTCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: RPTSRCACSSASQPDGDPKGCLP*AQGVRG Trigger: TCCTCTGACTCCTTGGGCTCAGGGGAGGCAGCCCTT...AGGGTCGCCATCTGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| CDS-3UTR CCA 90 bp | CTCGATGTGCTTGCAGCTCAGCGTCCCAGCCAGATGGCGACCCTCTGCAGGAAGTGTGGGTGTCCCCAGTaGGGAGGCCTGGCGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LDVLAAQRPSQMATLCRKCGCPQ*GGLAAA Trigger: AGCAGCCGCCAGGCCTCCCCACTGGGGACACCCACA...CTTCCTGCAGAGGGTCGCCATCTGGCTGGGACGCTGAGCTGCAAGCACATCGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| CDS-3UTR CCA 90 bp | GAGGTGGTGGTGGTGGACCTACCAGCTACCCGTCCCCGCCTCCCGCTCACACCAGGGGGAGGCCTGGGGTaGCCAGTCAAGTTCATCTAC | + |
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Preference number: 4 (lower is better) Translates to: EVVVVDLPATRPRLPLTPGGGLG*PVKFIY Trigger: GTAGATGAACTTGACTGGCCACCCCAGGCCTCCCCC...TGGTGTGAGCGGGAGGCGGGGACGGGTAGCTGGTAGGTCCACCACCACCACCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| CDS-3UTR CCA 90 bp | AGGTGGTGGTGGTGGACCTACCAGCTACCCGTCCCCGCCTCCCGCTCACACCAGAGCTCACGAGTGTTGTaGTGGAGAGCGGCCGACGTC | + |
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Preference number: 4 (lower is better) Translates to: RWWWWTYQLPVPASRSHQSSRVL*WRAADV Trigger: GACGTCGGCCGCTCTCCACCACAACACTCGTGAGCT...CTGGTGTGAGCGGGAGGCGGGGACGGGTAGCTGGTAGGTCCACCACCACCACCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| CDS-3UTR GCA 90 bp | ATGACCCCGGCCCCGCCGCAGCCTGATCTGACGCACAGCACCCTCGAAGAGCTCTGTAGGGCACGGGCATaGTTCCTCTTCGTCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: MTPAPPQPDLTHSTLEELCRARA*FLFVWG Trigger: TCCCCAGACGAAGAGGAAGCATGCCCGTGCCCTACA...GAGCTCTTCGAGGGTGCTGTGCGTCAGATCAGGCTGCGGCGGGGCCGGGGTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| CDS-3UTR CCA 90 bp | ATGACCCCGGCCCCGCCGCAGCCTGATCTGACGCACAGCACCCTCGAAGAGCTCAGTTCATCTACAGCTTaGGCCCGCCGCAGCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: MTPAPPQPDLTHSTLEELSSSTA*ARRSWC Trigger: ACACCAGCTGCGGCGGGCCCAAGCTGTAGATGAACT...GAGCTCTTCGAGGGTGCTGTGCGTCAGATCAGGCTGCGGCGGGGCCGGGGTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| 3UTR CAA 72 bp | GTGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTGCTaGCAGCTCAGCGTCCCAGCCAGATGGCGACCCTCT | + |
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Preference number: 4 (lower is better) Translates to: VLWWRAADVSMC*QLSVPARWRPS Trigger: AGAGGGTCGCCATCTGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| CDS-3UTR TCA 90 bp | GCCCCGCCGCAGCCTGATCTGACGCACAGCACCCTCGAAGAGCTCACGAGTGTTCCTCCTGCATCTCCCTaGGTTCTCCATCTCGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: APPQPDLTHSTLEELTSVPPASP*VLHLVS Trigger: GCTCACGAGATGGAGAACTCAGGGAGATGCAGGAGG...AACACTCGTGAGCTCTTCGAGGGTGCTGTGCGTCAGATCAGGCTGCGGCGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| CDS-3UTR TCA 90 bp | AGGTGGTGGTGGTGGACCTACCAGCTACCCGTCCCCGCCTCCCGCTCACACCAGAGAGAGGTCGTGACATaGCCTGGAGCGTTGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: RWWWWTYQLPVPASRSHQREVVT*PGALLE Trigger: TTCAAGCAACGCTCCAGGTCATGTCACGACCTCTCT...CTGGTGTGAGCGGGAGGCGGGGACGGGTAGCTGGTAGGTCCACCACCACCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| CDS-3UTR CCA 90 bp | GGCGGTGGTTCGAAAGGGTGGCCGAGGTACCCAGGAGGAGCAGTGAAGGCTAGTGGGGGAGGCCTGGGGTaGCCAGTCAAGTTCATCTAC | + |
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Preference number: 4 (lower is better) Translates to: GGGSKGWPRYPGGAVKASGGGLG*PVKFIY Trigger: GTAGATGAACTTGACTGGCCACCCCAGGCCTCCCCC...ACTAGCCTTCACTGCTCCTCCTGGGTACCTCGGCCACCCTTTCGAACCACCGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| CDS-3UTR GCA 90 bp | CCCTCGAAGAGCTCACGAGTGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTGCGGGAGGCCTGGCGGCTaGTGGAAGAACAAAGTGCTA | + |
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Preference number: 4 (lower is better) Translates to: PSKSSRVLWWRAADVSMCGRPGG*WKNKVL Trigger: TAGCACTTTGTTCTTCCAGCAGCCGCCAGGCCTCCC...GCACATCGAGACGTCGGCCGCTCTCCACCACAACACTCGTGAGCTCTTCGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| CDS-3UTR GCA 90 bp | AGTGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTGCTTGCAGCTCAGCGTCCCAAGTGCCCGCTAGAGTaGTCTTGCCCACGCCACTCT | + |
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Preference number: 4 (lower is better) Translates to: SVVVESGRRLDVLAAQRPKCPLE*SCPRHS Trigger: AGAGTGGCGTGGGCAAGAGCACTCTAGCGGGCACTT...GGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| CDS-3UTR GCA 90 bp | GCAGCTCAGCGTCCCAGCCAGATGGCGACCCTCTGCAGGAAGGGAACAGCAGCTCTGCAGCCATCCTCCTaGATCTCCCTGAGTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: AAQRPSQMATLCRKGTAALQPSS*ISLSSP Trigger: TGGAGAACTCAGGGAGATGCAGGAGGATGGCTGCAG...AGCTGCTGTTCCCTTCCTGCAGAGGGTCGCCATCTGGCTGGGACGCTGAGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| CDS-3UTR TCA 90 bp | CCGCTCACACCAGGGCATCCTGGGTATTTTTGGTTTCCTAGACGGACAGGAGTGCGCCGCAGCCTGATCTaGCGCACAGCACCCTCGAAG | + |
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Preference number: 4 (lower is better) Translates to: PLTPGHPGYFWFPRRTGVRRSLI*RTAPSK Trigger: CTTCGAGGGTGCTGTGCGTCAGATCAGGCTGCGGCG...CACTCCTGTCCGTCTAGGAAACCAAAAATACCCAGGATGCCCTGGTGTGAGCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| CDS-3UTR TCA 90 bp | CCCAGCCCGGAGCCGAAGAAGGGTTTCTGGAACTTTAGAGAAGCTTCGTCGATCAAGGGCTGCCTCCCCTaGGCCCAAGGAGTCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: PSPEPKKGFWNFREASSIKGCLP*AQGVRG Trigger: TCCTCTGACTCCTTGGGCTCAGGGGAGGCAGCCCTT...GATCGACGAAGCTTCTCTAAAGTTCCAGAAACCCTTCTTCGGCTCCGGGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168930.2 |
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| CDS-3UTR TCA 90 bp | TGTGGTGGAGAGCGGCCGACGTCTCGATGTGCTTGCAGCTCAGCGTCCCAGCCATCGTCGATCTGTCACTaGGAAGACGATGAGAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: CGGERPTSRCACSSASQPSSICH*EDDEKG Trigger: GCCTTTCTCATCGTCTTCTCAGTGACAGATCGACGA...TGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| CDS-3UTR GCA 90 bp | GAAGCGCTTAGCTTTCTTGGTGAGGCTCTCACGGCGCGTAGGCGGCGCGGGGCCGCTGGAAGAACAAAGTaGTACGGTTTCTGTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: EALSFLGEALTARRRRGAAGRTK*YGFCVH Trigger: ATGGACACAGAAACCGTAGCACTTTGTTCTTCCAGC...GGCCCCGCGCCGCCTACGCGCCGTGAGAGCCTCACCAAGAAAGCTAAGCGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
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| CDS-3UTR GCA 90 bp | AGGTGGTGGTGGTGGACCTACCAGCTACCCGTCCCCGCCTCCCGCTCACACCAGGCTGGAAGAACAAAGTaGTACGGTTTCTGTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: RWWWWTYQLPVPASRSHQAGRTK*YGFCVH Trigger: ATGGACACAGAAACCGTAGCACTTTGTTCTTCCAGC...CTGGTGTGAGCGGGAGGCGGGGACGGGTAGCTGGTAGGTCCACCACCACCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| CDS-3UTR CCA 90 bp | TCGAAAGGGTGGCCGAGGTACCCAGGAGGAGCAGTGAAGGCTAGTGAAGGACCTAGGCCTGGCGGCTGCTaGAAGAACAAAGTGCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: SKGWPRYPGGAVKASEGPRPGGC*KNKVLR Trigger: CCGTAGCACTTTGTTCTTCCAGCAGCCGCCAGGCCT...AGGTCCTTCACTAGCCTTCACTGCTCCTCCTGGGTACCTCGGCCACCCTTTCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
||
| CDS-3UTR TCA 90 bp | GGTAAGGCATGTTCCGAGTACCAAGGAGGTCAGCTCCATCCAGGAGGCTACAAAAAGGGCTGCCTCCCCTaGGCCCAAGGAGTCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKACSEYQGGQLHPGGYKKGCLP*AQGVRG Trigger: TCCTCTGACTCCTTGGGCTCAGGGGAGGCAGCCCTT...TTTGTAGCCTCCTGGATGGAGCTGACCTCCTTGGTACTCGGAACATGCCTTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTCACGAGTGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTGCTTGCAGCTTCACTGAGAAGACGATaGGAAAGGCATCCCCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELTSVVVESGRRLDVLAASLRRR*ERHPPS Trigger: AGACGGGGGATGCCTTTCTCATCGTCTTCTCAGTGA...AGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACACTCGTGAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTCACGAGTGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTGCTTGCAGCTCAGAAGTGTAGTATCTaGTTCTGGTGTGGGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ELTSVVVESGRRLDVLAAQKCSI*FWCGCP Trigger: GGGACACCCACACCAGAAGCAGATACTACACTTCTG...AGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACACTCGTGAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
||
| CDS-3UTR GCA 90 bp | GGCATGTTCCGAGTACCAAGGAGGTCAGCTCCATCCAGGAGGCTACAAAGCACTTGTAGGGCACGGGCATaGTTCCTCTTCGTCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GMFRVPRRSAPSRRLQSTCRARA*FLFVWG Trigger: TCCCCAGACGAAGAGGAAGCATGCCCGTGCCCTACA...AGTGCTTTGTAGCCTCCTGGATGGAGCTGACCTCCTTGGTACTCGGAACATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCAGCCCGGAGCCGAAGAAGGGTTTCTGGAACTTTAGAGAAGCTTCGTCGATGTAGGGCACGGGCATaGTTCCTCTTCGTCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPARSRRRVSGTLEKLRRCRARA*FLFVWG Trigger: TCCCCAGACGAAGAGGAAGCATGCCCGTGCCCTACA...TCGACGAAGCTTCTCTAAAGTTCCAGAAACCCTTCTTCGGCTCCGGGCTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168930.2 |
||
| CDS-3UTR GCA 90 bp | GGTAAGGCATGTTCCGAGTACCAAGGAGGTCAGCTCCATCCAGGAGGCTACAAAGCCGACGTCTCGATGTaGTTGCAGCTCAGCGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKACSEYQGGQLHPGGYKADVSM*LQLSVP Trigger: TGGGACGCTGAGCTGCAAGCACATCGAGACGTCGGC...TTTGTAGCCTCCTGGATGGAGCTGACCTCCTTGGTACTCGGAACATGCCTTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCGGAGCCGAAGAAGGGTTTCTGGAACTTTAGAGAAGCTTCGTCGATCTGGGGGAGGCCTGGGGTaGCCAGTCAAGTTCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PARSRRRVSGTLEKLRRSGGGLG*PVKFIY Trigger: GTAGATGAACTTGACTGGCCACCCCAGGCCTCCCCC...AGATCGACGAAGCTTCTCTAAAGTTCCAGAAACCCTTCTTCGGCTCCGGGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168930.2 |
||
| CDS-3UTR CCA 90 bp | TGGTGGGGCCTCCCAGCCCGGAGCCGAAGAAGGGTTTCTGGAACTTTAGAGAAGAAGACGCCATCTTTTTaGGTAAGGGCTGCCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WWGLPARSRRRVSGTLEKKTPSF*VRAASP Trigger: AGGGGAGGCAGCCCTTACCCAAAAAGATGGCGTCTT...CTTCTCTAAAGTTCCAGAAACCCTTCTTCGGCTCCGGGCTGGGAGGCCCCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168930.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTAAGGCATGTTCCGAGTACCAAGGAGGTCAGCTCCATCCAGGAGGCTACAAGCACAGAGAGGTCGTaGCATGACCTGGAGCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVRHVPSTKEVSSIQEATSTERS*HDLERC Trigger: GCAACGCTCCAGGTCATGTCACGACCTCTCTGTGCT...TGTAGCCTCCTGGATGGAGCTGACCTCCTTGGTACTCGGAACATGCCTTACCTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCGGAGCCGAAGAAGGGTTTCTGGAACTTTAGAGAAGCTTCGTCGATCTAAGTGCCCGCTAGAGTaGTCTTGCCCACGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PARSRRRVSGTLEKLRRSKCPLE*SCPRHS Trigger: AGAGTGGCGTGGGCAAGAGCACTCTAGCGGGCACTT...AGATCGACGAAGCTTCTCTAAAGTTCCAGAAACCCTTCTTCGGCTCCGGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168930.2 |
||
| CDS-3UTR GCA 90 bp | GGCATGTTCCGAGTACCAAGGAGGTCAGCTCCATCCAGGAGGCTACAAAGCACTCTGCAGCCATCCTCCTaGATCTCCCTGTTCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GMFRVPRRSAPSRRLQSTLQPSS*ISLFPD Trigger: ATCTGGGAACAGGGAGATGCAGGAGGATGGCTGCAG...AGTGCTTTGTAGCCTCCTGGATGGAGCTGACCTCCTTGGTACTCGGAACATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAGGAGGCTACAAAGCACTTTTTCGGTTCTAGTTTTTGGAGTGTCTTTCCGTGTGGGTGTCCCCAGTaGGGAGGCCTGGCGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQEATKHFFGSSFWSVFPCGCPQ*GGLAAA Trigger: AGCAGCCGCCAGGCCTCCCCACTGGGGACACCCACA...CGGAAAGACACTCCAAAAACTAGAACCGAAAAAGTGCTTTGTAGCCTCCTGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| 3UTR CAA 72 bp | CCTTGCAGCACGGTTTTCTTCCCTGACTTGCAGGTCTaGAGGCTCTGTGAATGGTCGGCTGTTAAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCSTVFFPDLQV*RLCEWSAVKTR Trigger: CCTGGTCTTAACAGCCGACCATTCACAGAGCCTCAAGACCTGCAAGTCAGGGAAGAAAACCGTGCTGCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTCCCAGCCCGGAGCCGAAGAAGGGTTTCTGGAACTTTAGAGAAGCTTCGTCTTCTTTGTCCACCATaGTCCGTCTCTCATAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLPARSRRRVSGTLEKLRLLCPP*SVSHRC Trigger: ACACCTATGAGAGACGGATCATGGTGGACAAAGAAG...ACGAAGCTTCTCTAAAGTTCCAGAAACCCTTCTTCGGCTCCGGGCTGGGAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168930.2 |
||
| CDS-3UTR TCA 90 bp | GGTAAGGCATGTTCCGAGTACCAAGGAGGTCAGCTCCATCCAGGAGGCTACAAATCGTCGATCTGTCACTaGGAAGACGATGAGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKACSEYQGGQLHPGGYKSSICH*EDDEKG Trigger: GCCTTTCTCATCGTCTTCTCAGTGACAGATCGACGA...TTTGTAGCCTCCTGGATGGAGCTGACCTCCTTGGTACTCGGAACATGCCTTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGACAGAGGATAATTTTCAGTTATCTCTGGAAAAGTCATCTCTGGGTTTTTGCGACCCTCCTCCAGTaGTACCTCCCGGGAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGQRIIFSYLWKSHLWVFATLLQ*YLPGAG Trigger: GCCCGCTCCCGGGAGGTATCACTGGAGGAGGGTCGC...AAAAACCCAGAGATGACTTTTCCAGAGATAACTGAAAATTATCCTCTGTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR GCA 90 bp | GGCATGTTCCGAGTACCAAGGAGGTCAGCTCCATCCAGGAGGCTACAAAGCACTCATGACCTGGAGCGTTaGTTGAAGAACTTAGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GMFRVPRRSAPSRRLQSTHDLER*LKNLAL Trigger: CAACGCTAAGTTCTTCAAGCAACGCTCCAGGTCATG...AGTGCTTTGTAGCCTCCTGGATGGAGCTGACCTCCTTGGTACTCGGAACATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR TCA 90 bp | AAGGTAAGGCATGTTCCGAGTACCAAGGAGGTCAGCTCCATCCAGGAGGCTACACTTCTTTGTCCACCATaGTCCGTCTCTCATAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KVRHVPSTKEVSSIQEATLLCPP*SVSHRC Trigger: ACACCTATGAGAGACGGATCATGGTGGACAAAGAAG...TGTAGCCTCCTGGATGGAGCTGACCTCCTTGGTACTCGGAACATGCCTTACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAGGAGGCTACAAAGCACTTTTTCGGTTCTAGTTTTTGGAGTGTCTTTCCGACGTCTCGATGTGCTTaGAGCTCAGCGTCCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IQEATKHFFGSSFWSVFPTSRCA*SSASQP Trigger: TGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGT...CGGAAAGACACTCCAAAAACTAGAACCGAAAAAGTGCTTTGTAGCCTCCTGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTAAGGCATGTTCCGAGTACCAAGGAGGTCAGCTCCATCCAGGAGGCTACACCGAAGAAGGGTTTCTaGAACTTTAGAGAAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KVRHVPSTKEVSSIQEATPKKGF*NFREAS Trigger: CGAAGCTTCTCTAAAGTTCCAGAAACCCTTCTTCGG...TGTAGCCTCCTGGATGGAGCTGACCTCCTTGGTACTCGGAACATGCCTTACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCCTATGGAGATTTCAAGTACAGAATGGCTTTAGGATACACACCCTCCAGTAAGACGCCATCTTTTTaGGTAAGGGCTGCCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAYGDFKYRMALGYTPSSKTPSF*VRAASP Trigger: AGGGGAGGCAGCCCTTACCCAAAAAGATGGCGTCTT...ACTGGAGGGTGTGTATCCTAAAGCCATTCTGTACTTGAAATCTCCATAGGCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
||
| CDS-3UTR CCA 90 bp | AGTCAGAGTCCAATTTCAAGAATAACTTCCAGCCCTTTCTCTGAAGAACTTCTTTCACGAGTGTTGTGGTaGAGAGCGGCCGACGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SQSPISRITSSPFSEELLSRVLW*RAADVS Trigger: CGAGACGTCGGCCGCTCTCCACCACAACACTCGTGA...AAGAAGTTCTTCAGAGAAAGGGCTGGAAGTTATTCTTGAAATTGGACTCTGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR GCA 90 bp | GTAAGTCAGAGTCCAATTTCAAGAATAACTTCCAGCCCTTTCTCTGAAGAACTTAAGTGCCCGCTAGAGTaGTCTTGCCCACGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSQSPISRITSSPFSEELKCPLE*SCPRHS Trigger: AGAGTGGCGTGGGCAAGAGCACTCTAGCGGGCACTT...AAGTTCTTCAGAGAAAGGGCTGGAAGTTATTCTTGAAATTGGACTCTGACTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR CCA 90 bp | AGTCAGAGTCCAATTTCAAGAATAACTTCCAGCCCTTTCTCTGAAGAACTTCTTAGGCCTGGCGGCTGCTaGAAGAACAAAGTGCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: SQSPISRITSSPFSEELLRPGGC*KNKVLR Trigger: CCGTAGCACTTTGTTCTTCCAGCAGCCGCCAGGCCT...AAGAAGTTCTTCAGAGAAAGGGCTGGAAGTTATTCTTGAAATTGGACTCTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTTACCTTTAAAACTTACTTAAAGGTAAGGCATGTTCCGAGTACCAAGGAGGGGAGGCCTGGCGGCTaGTGGAAGAACAAAGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VFTFKTYLKVRHVPSTKEGRPGG*WKNKVL Trigger: TAGCACTTTGTTCTTCCAGCAGCCGCCAGGCCTCCC...CTCCTTGGTACTCGGAACATGCCTTACCTTTAAGTAAGTTTTAAAGGTAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTTACCTTTAAAACTTACTTAAAGGTAAGGCATGTTCCGAGTACCAAGGAGAAGACGCCATCTTTTTaGGTAAGGGCTGCCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFTFKTYLKVRHVPSTKEKTPSF*VRAASP Trigger: AGGGGAGGCAGCCCTTACCCAAAAAGATGGCGTCTT...CTCCTTGGTACTCGGAACATGCCTTACCTTTAAGTAAGTTTTAAAGGTAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS GCA 90 bp | CTACAGCTTGGGCCCGCCGCAGCTGGTGTTTGTAGGGCACGGGCATaGTTCCTCTTCGTCTGGGGACCCCAGGAGCAGGAGGAGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LQLGPAAAGVCRARA*FLFVWGPQEQEEAR Trigger: GCGGGCCTCCTCCTGCTCCTGGGGTCCCCAGACGAAGAGGAAGCATGCCCGTGCCCTACAAACACCAGCTGCGGCGGGCCCAAGCTGTAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164697.8 ENSMUST00000164766.8 ENSMUST00000168930.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGGTGGTGGTGGACCTACCAGCTACCCGTCCCCGCCTCCCGCTCACACCAGTTGCGCGGCACCAGGTaGGCGAGGAAGCGCTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RWWWWTYQLPVPASRSHQLRGTR*ARKRLA Trigger: AGCTAAGCGCTTCCTCGCCAACCTGGTGCCGCGCAA...CTGGTGTGAGCGGGAGGCGGGGACGGGTAGCTGGTAGGTCCACCACCACCACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR CAA 90 bp | GACAGGAGTGGGGTGAGGGGGCGAGCGGAGGGCACGGTGACCATGGCGACTGCAAAGCGCTTAGCTTTCTaGGTGAGGCTCTCACGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DRSGVRGRAEGTVTMATAKRLAF*VRLSRR Trigger: GCGCCGTGAGAGCCTCACCAAGAAAGCTAAGCGCTT...TGCAGTCGCCATGGTCACCGTGCCCTCCGCTCGCCCCCTCACCCCACTCCTGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS GCA 90 bp | GCTCACGAGTGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTGCTTaGAGCTCAGCGTCCCAGCCAGATGGCGACCCTCCTCCAGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: AHECCGGERPTSRCA*SSASQPDGDPPPVI Trigger: TATCACTGGAGGAGGGTCGCCATCTGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACACTCGTGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS GCA 90 bp | AAGAGCTCACGAGTGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTaGTTGCAGCTCAGCGTCCCAGCCAGATGGCGACCCTCCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KSSRVLWWRAADVSM*LQLSVPARWRPSSS Trigger: ACTGGAGGAGGGTCGCCATCTGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACACTCGTGAGCTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS GCA 90 bp | GGGTGTCCCCAGTGGGGAGGCCTGGCGGCTGCTGGAAGAACAAAGTaGTACGGTTTCTGTGTCCATGTCCATGTCGGTGTCAAGGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GCPQWGGLAAAGRTK*YGFCVHVHVGVKVR Trigger: ACGGACCTTGACACCGACATGGACATGGACACAGAAACCGTAGCACTTTGTTCTTCCAGCAGCCGCCAGGCCTCCCCACTGGGGACACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164697.8 ENSMUST00000164766.8 |
||
| CDS GCA 90 bp | AGTTCTCCATCTCGTGAGCATGGTCTCCCTGGAGACCTCCAAAAGTaGCCGCTAGAGTGCTCTTGCCCACGCCACTCTCCCCCACGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSPSREHGLPGDLQK*PLECSCPRHSPPRA Trigger: TGCTCGTGGGGGAGAGTGGCGTGGGCAAGAGCACTCTAGCGGGCACTTTTGGAGGTCTCCAGGGAGACCATGCTCACGAGATGGAGAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000164697.8 ENSMUST00000164766.8 ENSMUST00000168930.2 |
||
| CDS-3UTR CAA 90 bp | TCGAAAGGGTGGCCGAGGTACCCAGGAGGAGCAGTGAAGGCTAGTGAAGGACCTAAGTTCATCTACAGCTaGGGCCCGCCGCAGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SKGWPRYPGGAVKASEGPKFIYS*GPPQLV Trigger: CACCAGCTGCGGCGGGCCCAAGCTGTAGATGAACTT...AGGTCCTTCACTAGCCTTCACTGCTCCTCCTGGGTACCTCGGCCACCCTTTCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGGCCTCCCAGCCCGGAGCCGAAGAAGGGTTTCTGGAACTTTAGAGAAGCTAAGTTCATCTACAGCTaGGGCCCGCCGCAGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VGPPSPEPKKGFWNFREAKFIYS*GPPQLV Trigger: CACCAGCTGCGGCGGGCCCAAGCTGTAGATGAACTT...AGCTTCTCTAAAGTTCCAGAAACCCTTCTTCGGCTCCGGGCTGGGAGGCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168930.2 |
||
| CDS-3UTR CAA 90 bp | CCGCTCACACCAGGGCATCCTGGGTATTTTTGGTTTCCTAGACGGACAGGAGTGAAGTTCATCTACAGCTaGGGCCCGCCGCAGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLTPGHPGYFWFPRRTGVKFIYS*GPPQLV Trigger: CACCAGCTGCGGCGGGCCCAAGCTGTAGATGAACTT...CACTCCTGTCCGTCTAGGAAACCAAAAATACCCAGGATGCCCTGGTGTGAGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR CAA 90 bp | GGTAAGGCATGTTCCGAGTACCAAGGAGGTCAGCTCCATCCAGGAGGCTACAAAGACGTCTCGATGTGCTaGCAGCTCAGCGTCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GKACSEYQGGQLHPGGYKDVSMC*QLSVPA Trigger: GGCTGGGACGCTGAGCTGCAAGCACATCGAGACGTC...TTTGTAGCCTCCTGGATGGAGCTGACCTCCTTGGTACTCGGAACATGCCTTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR CAA 90 bp | CCACCGAATCCCAACTCAGAACTGAGCAGGGATCCTAGGGCGGTGGTTCGAAAGAAAGACGCCATCTTTTaGGGTAAGGGCTGCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PPNPNSELSRDPRAVVRKKDAIF*GKGCLP Trigger: GGGGAGGCAGCCCTTACCCAAAAAGATGGCGTCTTT...CTTTCGAACCACCGCCCTAGGATCCCTGCTCAGTTCTGAGTTGGGATTCGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164697.8 |
||
| CDS-3UTR CAA 90 bp | GGCATGTTCCGAGTACCAAGGAGGTCAGCTCCATCCAGGAGGCTACAAAGCACTGACCTGGAGCGTTGCTaGAAGAACTTAGCGTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GMFRVPRRSAPSRRLQSTDLERC*KNLALR Trigger: GCGCAACGCTAAGTTCTTCAAGCAACGCTCCAGGTC...AGTGCTTTGTAGCCTCCTGGATGGAGCTGACCTCCTTGGTACTCGGAACATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS CCA 90 bp | GCCAGGTCACTCTTATTTCCAACAAGGATGACAGGTAGGTCATGGTaGGGCCTCCCAGCCCGGAGCCGAAGAAGGGTTTCTGGAACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ARSLLFPTRMTGRSW*GLPARSRRRVSGTL Trigger: TAAAGTTCCAGAAACCCTTCTTCGGCTCCGGGCTGGGAGGCCCCACCATGACCTACCTGTCATCCTTGTTGGAAATAAGAGTGACCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS TCA 90 bp | AAGAAGGGTTTCTGGAACTTTAGAGAAGCTTCGTCGATCTGTCACTaGGAAGACGATGAGAAAGGCATCCCCCGTCTGAAGGCAGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: KKGFWNFREASSICH*EDDEKGIPRLKAVI Trigger: GATCACTGCCTTCAGACGGGGGATGCCTTTCTCATCGTCTTCTCAGTGACAGATCGACGAAGCTTCTCTAAAGTTCCAGAAACCCTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR CAA 90 bp | ATAACCTTAAAGGAAACGTGCCATACTAGAATGGTAAGTCAGAGTCCAATTTCATTGAAGAACTTAGCGTaGCGCGGCACCAGGTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ITLKETCHTRMVSQSPISLKNLA*RGTRLA Trigger: CGCCAACCTGGTGCCGCGCAACGCTAAGTTCTTCAA...TGAAATTGGACTCTGACTTACCATTCTAGTATGGCACGTTTCCTTTAAGGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS-3UTR CAA 90 bp | ATAACCTTAAAGGAAACGTGCCATACTAGAATGGTAAGTCAGAGTCCAATTTCAAAAGACGCCATCTTTTaGGGTAAGGGCTGCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ITLKETCHTRMVSQSPISKDAIF*GKGCLP Trigger: GGGGAGGCAGCCCTTACCCAAAAAGATGGCGTCTTT...TGAAATTGGACTCTGACTTACCATTCTAGTATGGCACGTTTCCTTTAAGGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS CAA 90 bp | TTAGCGTTGCGCGGCACCAGGTTGGCGAGGAAGCGCTTAGCTTTCTaGGTGAGGCTCTCACGGCGCGTAGGCGGCGCGGGGCCGTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: LALRGTRLARKRLAF*VRLSRRVGGAGPSG Trigger: CCCGGACGGCCCCGCGCCGCCTACGCGCCGTGAGAGCCTCACCAAGAAAGCTAAGCGCTTCCTCGCCAACCTGGTGCCGCGCAACGCTAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
||
| CDS CAA 72 bp | CGCGGCACCAGGTTGGCGAGGAAGCGCTTAGCTTTCTaGGTGAGGCTCTCACGGCGCGTAGGCGGCGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: RGTRLARKRLAF*VRLSRRVGGAG Trigger: CCCCGCGCCGCCTACGCGCCGTGAGAGCCTCACCAAGAAAGCTAAGCGCTTCCTCGCCAACCTGGTGCCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| CDS GCA 72 bp | GGGCCCGCCGCAGCTGGTGTTTGTAGGGCACGGGCATaGTTCCTCTTCGTCTGGGGACCCCAGGAGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GPAAAGVCRARA*FLFVWGPQEQE Trigger: CTCCTGCTCCTGGGGTCCCCAGACGAAGAGGAAGCATGCCCGTGCCCTACAAACACCAGCTGCGGCGGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164697.8 ENSMUST00000164766.8 ENSMUST00000168930.2 |
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| CDS CAA 72 bp | GTGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTGCTaGCAGCTCAGCGTCCCAGCCAGATGGCGACCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VLWWRAADVSMC*QLSVPARWRPS Trigger: GGAGGGTCGCCATCTGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| CDS GCA 72 bp | TGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTGCTTaGAGCTCAGCGTCCCAGCCAGATGGCGACCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CCGGERPTSRCA*SSASQPDGDPP Trigger: AGGAGGGTCGCCATCTGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| CDS CAA 90 bp | AGCTCACGAGTGTTGTGGTGGAGAGCGGCCGACGTCTCGATGTGCTaGCAGCTCAGCGTCCCAGCCAGATGGCGACCCTCCTCCAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: SSRVLWWRAADVSMC*QLSVPARWRPSSSD Trigger: ATCACTGGAGGAGGGTCGCCATCTGGCTGGGACGCTGAGCTGCAAGCACATCGAGACGTCGGCCGCTCTCCACCACAACACTCGTGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164766.8 |
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| CDS GCA 72 bp | CAGTGGGGAGGCCTGGCGGCTGCTGGAAGAACAAAGTaGTACGGTTTCTGTGTCCATGTCCATGTCGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: QWGGLAAAGRTK*YGFCVHVHVGV Trigger: GACACCGACATGGACATGGACACAGAAACCGTAGCACTTTGTTCTTCCAGCAGCCGCCAGGCCTCCCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164697.8 ENSMUST00000164766.8 |
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