Pregenerated sensors for RELT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008318Ensembl transcript IDs: ENSMUST00000008462.11, ENSMUST00000136231.2, ENSMUST00000139604.8, ENSMUST00000155413.9, ENSMUST00000156855.8
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCCAGAGAGTGAGGCCAGGCCCTGCACAGTGTGCAGGTGGTGGTaGTGCGGGCAGATGTGGGGTATGCTGGGTGAGGCCGGCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: GPESEARPCTVCRWW*CGQMWGMLGEAGSS Trigger: GCTGCTGCCGGCCTCACCCAGCATACCCCACATCTGCCCGCATCACCACCACCTGCACACTGTGCAGGGCCTGGCCTCACTCTCTGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR GCA 90 bp | ACCGGGACTGCAGGGATAGGGTGGGCTCTTGATCTCCTGCTCACGTaGTGTGCCGCAGGCTGCCTCCTCAGTGGGGCGGACGGTCCCACC | + |
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Preference number: 1 (lower is better) Translates to: TGTAGIGWALDLLLT*CAAGCLLSGADGPT Trigger: GGTGGGACCGTCCGCCCCACTGAGGAGGCAGCCTGCGGCACAGCACGTGAGCAGGAGATCAAGAGCCCACCCTATCCCTGCAGTCCCGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR GCA 90 bp | ATAGGGTGGGCTCTTGATCTCCTGCTCACGTGCTGTGCCGCAGGCTaGCTCCTCAGTGGGGCGGACGGTCCCACCTCCAGGACTTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: IGWALDLLLTCCAAG*LLSGADGPTSRTWP Trigger: AGGCCAAGTCCTGGAGGTGGGACCGTCCGCCCCACTGAGGAGGCAGCCTGCGGCACAGCACGTGAGCAGGAGATCAAGAGCCCACCCTAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR TCA 90 bp | CTCTGGCCACTTCTGGCTACAACGGGAGCAACAGGGGCCAGAGAGTaGGGCCAGGCCCTGCACAGTGTGCAGGTGGTGGTGATGCGGGCA | + |
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Preference number: 1 (lower is better) Translates to: LWPLLATTGATGARE*GQALHSVQVVVMRA Trigger: TGCCCGCATCACCACCACCTGCACACTGTGCAGGGCCTGGCCTCACTCTCTGGCCCCTGTTGCTCCCGTTGTAGCCAGAAGTGGCCAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR GCA 90 bp | ACCACAGGGGCATTGAAAACCACAGGCCACAGGCACTCCCTAGCCTaGCTGTCTCCTCTTCCCACAGCTCCAGAGCTTGAGGGCAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: TTGALKTTGHRHSLA*LSPLPTAPELEGSR Trigger: CCTGCTGCCCTCAAGCTCTGGAGCTGTGGGAAGAGGAGACAGGCAGGCTAGGGAGTGCCTGTGGCCTGTGGTTTTCAATGCCCCTGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| 3UTR GCA 90 bp | CTGGCCTCTGGGGACCTCGGTGAGGATGAGACGAGGAGCCACCTCTaGCTATTTCCCTGGTTTCAGAGGAAGGTGCTGATGAGGGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LASGDLGEDETRSHL*LFPWFQRKVLMRGR Trigger: CCTCCCCCTCATCAGCACCTTCCTCTGAAACCAGGGAAATAGGCAGAGGTGGCTCCTCGTCTCATCCTCACCGAGGTCCCCAGAGGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| 3UTR CCA 90 bp | GCCTGTCTCCTCTTCCCACAGCTCCAGAGCTTGAGGGCAGCAGGGTaGACTGAGGCTCTGCACCAGAGAGCCCTGTCCAAGTCAAGTCAT | + |
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Preference number: 1 (lower is better) Translates to: ACLLFPQLQSLRAAG*TEALHQRALSKSSH Trigger: ATGACTTGACTTGGACAGGGCTCTCTGGTGCAGAGCCTCAGTCCACCCTGCTGCCCTCAAGCTCTGGAGCTGTGGGAAGAGGAGACAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| 3UTR CCA 90 bp | AGCCCCATGAGACAAAAGACAGGAACGATGGCAATCACTGCATACTaGGCAGCCGTCTCCTCAGGACCGCCTGCCCGAGTGCCATTCCCG | + |
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Preference number: 1 (lower is better) Translates to: SPMRQKTGTMAITAY*AAVSSGPPARVPFP Trigger: CGGGAATGGCACTCGGGCAGGCGGTCCTGAGGAGACGGCTGCCCAGTATGCAGTGATTGCCATCGTTCCTGTCTTTTGTCTCATGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR GCA 90 bp | GCCACCAGTACAGGGCTCTTTGCTACCCCTTCCCTCTATAGGGCCTaGCAGAAGAGAGGGAGTCACATCCAGGGTCCAGGACATGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: ATSTGLFATPSLYRA*QKRGSHIQGPGHGQ Trigger: TTGCCCATGTCCTGGACCCTGGATGTGACTCCCTCTCTTCTGGCAGGCCCTATAGAGGGAAGGGGTAGCAAAGAGCCCTGTACTGGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR GCA 90 bp | TCCCTGGTTTCAGAGGAAGGTGCTGATGAGGGGGAGGACGATGTGTaGACACCTGGCAGGGCCCTGGAGGTGAGCAGTTTTCAGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: SLVSEEGADEGEDDV*TPGRALEVSSFQRG Trigger: TCCTCTCTGAAAACTGCTCACCTCCAGGGCCCTGCCAGGTGTGCACACATCGTCCTCCCCCTCATCAGCACCTTCCTCTGAAACCAGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| 3UTR CCA 90 bp | ACGGAACCTGCCCACAGACAAGATGGTAATCTCGCCCTGACGTCCTaGCTTGGCACTAGCCTTGGGAGCCCTGGATGCAGTAGGCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: TEPAHRQDGNLALTS*LGTSLGSPGCSRQK Trigger: CTTCTGCCTACTGCATCCAGGGCTCCCAAGGCTAGTGCCAAGCCAGGACGTCAGGGCGAGATTACCATCTTGTCTGTGGGCAGGTTCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR TCA 90 bp | ATGTGGGGTATGCTGGGTGAGGCCGGCAGCAGCCTTTCTTCTCTGTaGTCAGGCGCACCAGGACTCCAATGGTGTCCTCGTTGGCATCTT | + |
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Preference number: 1 (lower is better) Translates to: MWGMLGEAGSSLSSL*SGAPGLQWCPRWHL Trigger: AAGATGCCAACGAGGACACCATTGGAGTCCTGGTGCGCCTGATCACAGAGAAGAAAGGCTGCTGCCGGCCTCACCCAGCATACCCCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR TCA 90 bp | GCTGTGGGGAGTCAGGGAGATCACCCTCTGAAGGCCCAGCCTCCGTaGTGGTCTTCACCTCAGATAACAATGAACTGGTCCGCTGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: AVGSQGDHPLKAQPP*WSSPQITMNWSAAQ Trigger: CTGAGCAGCGGACCAGTTCATTGTTATCTGAGGTGAAGACCATCACGGAGGCTGGGCCTTCAGAGGGTGATCTCCCTGACTCCCCACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR CCA 90 bp | GACCTCGGTGAGGATGAGACGAGGAGCCACCTCTGCCTATTTCCCTaGTTTCAGAGGAAGGTGCTGATGAGGGGGAGGACGATGTGTGCA | + |
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Preference number: 1 (lower is better) Translates to: DLGEDETRSHLCLFP*FQRKVLMRGRTMCA Trigger: TGCACACATCGTCCTCCCCCTCATCAGCACCTTCCTCTGAAACCAGGGAAATAGGCAGAGGTGGCTCCTCGTCTCATCCTCACCGAGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| 3UTR TCA 90 bp | CCACTCCTCCACCAAACCAGACCTCTAAGGGACAGAGGGCTCCTATaGTGTGTTCAGGGCAGGCACAGGGTTACAGCACCCTGCATGGAA | + |
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Preference number: 1 (lower is better) Translates to: PLLHQTRPLRDRGLL*CVQGRHRVTAPCME Trigger: TTCCATGCAGGGTGCTGTAACCCTGTGCCTGCCCTGAACACATCATAGGAGCCCTCTGTCCCTTAGAGGTCTGGTTTGGTGGAGGAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR CCA 90 bp | GGTCCAGGACATGGGCAAGAGTGGCTAGTTCCCAAGGCACAAGCTTaGGGCCAGGTACAGATACCACTCCTCCACCAAACCAGACCTCTA | + |
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Preference number: 1 (lower is better) Translates to: GPGHGQEWLVPKAQA*GQVQIPLLHQTRPL Trigger: TAGAGGTCTGGTTTGGTGGAGGAGTGGTATCTGTACCTGGCCCCAAGCTTGTGCCTTGGGAACTAGCCACTCTTGCCCATGTCCTGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR GCA 90 bp | GCCTCCGTGATGGTCTTCACCTCAGATAACAATGAACTGGTCCGCTaGTCAGGAATACGAGCCACACGGAACCTGCCCACAGACAAGATG | + |
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Preference number: 1 (lower is better) Translates to: ASVMVFTSDNNELVR*SGIRATRNLPTDKM Trigger: CATCTTGTCTGTGGGCAGGTTCCGTGTGGCTCGTATTCCTGAGCAGCGGACCAGTTCATTGTTATCTGAGGTGAAGACCATCACGGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR TCA 90 bp | CTCCCAGGACAGGGCAGAGTGTCTAATTCTAGACAGCCCATCAGATaGCCAGGTTGCTTTCACTTAGCCGGACCACATAGCGGTTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: LPGQGRVSNSRQPIR*PGCFHLAGPHSGSP Trigger: AGGAGAACCGCTATGTGGTCCGGCTAAGTGAAAGCAACCTGGTCATCTGATGGGCTGTCTAGAATTAGACACTCTGCCCTGTCCTGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR CCA 90 bp | ATTCAATCACACATATGGCTCAGCCTGTATTTCTATTGGGGAACCTaGCCTCTGGGGACCTCGGTGAGGATGAGACGAGGAGCCACCTCT | + |
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Preference number: 1 (lower is better) Translates to: IQSHIWLSLYFYWGT*PLGTSVRMRRGATS Trigger: AGAGGTGGCTCCTCGTCTCATCCTCACCGAGGTCCCCAGAGGCCAGGTTCCCCAATAGAAATACAGGCTGAGCCATATGTGTGATTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| 3UTR CCA 90 bp | TGGGAACACATTCAATCACACATATGGCTCAGCCTGTATTTCTATTaGGGAACCTGGCCTCTGGGGACCTCGGTGAGGATGAGACGAGGA | + |
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Preference number: 1 (lower is better) Translates to: WEHIQSHIWLSLYFY*GTWPLGTSVRMRRG Trigger: TCCTCGTCTCATCCTCACCGAGGTCCCCAGAGGCCAGGTTCCCCAATAGAAATACAGGCTGAGCCATATGTGTGATTGAATGTGTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGGGCGGACGGTCCCACCTCCAGGACTTGGCCTTTGCATCTTGGTCCTCAAGTGGTGGCAGCTGCTaGCTCAGGAGACAGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: QWGGRSHLQDLAFASWSSSGGSC*LRRQQH Trigger: GTGCTGCTGTCTCCTGAGGCAGCAGCTGCCACCACT...TGAGGACCAAGATGCAAAGGCCAAGTCCTGGAGGTGGGACCGTCCGCCCCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCTATGATGTGTTCAGGGCAGGCACAGGGTTACAGCACCCTGCATGGAAGAGGCTGCCTCCTCAGTaGGGCGGACGGTCCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: GSYDVFRAGTGLQHPAWKRLPPQ*GGRSHL Trigger: GAGGTGGGACCGTCCGCCCCACTGAGGAGGCAGCCT...CTTCCATGCAGGGTGCTGTAACCCTGTGCCTGCCCTGAACACATCATAGGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTCCTCAGTGGGGCGGACGGTCCCACCTCCAGGACTTGGCCTTTGCATCTTGCCCAAGGCACAAGCTTaGGGCCAGGTACAGATACCA | + |
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Preference number: 2 (lower is better) Translates to: ASSVGRTVPPPGLGLCILPKAQA*GQVQIP Trigger: TGGTATCTGTACCTGGCCCCAAGCTTGTGCCTTGGG...CAAGATGCAAAGGCCAAGTCCTGGAGGTGGGACCGTCCGCCCCACTGAGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGGGCGGACGGTCCCACCTCCAGGACTTGGCCTTTGCATCTTGGTCCTCACCAGGGTCCAGGACATaGGCAAGAGTGGCTAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: QWGGRSHLQDLAFASWSSPGSRT*ARVASS Trigger: GGAACTAGCCACTCTTGCCCATGTCCTGGACCCTGG...TGAGGACCAAGATGCAAAGGCCAAGTCCTGGAGGTGGGACCGTCCGCCCCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGGGGAGGACGATGTGTGCACACCTGGCAGGGCCCTGGAGGTGAGCAGTTTTTCAAGTGTGTGGGGCTaGAGATGTAGGGGCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: EGEDDVCTPGRALEVSSFSSVWG*RCRGRA Trigger: TGCCCTGCCCCTACATCTCCAGCCCCACACACTTGA...AAAACTGCTCACCTCCAGGGCCCTGCCAGGTGTGCACACATCGTCCTCCCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAGAAGAGAGGGAGTCACATCCAGGGTCCAGGACATGGGCAAGAGTGGCTAGATGTGGGGTATGCTaGGTGAGGCCGGCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LPEERESHPGSRTWARVARCGVC*VRPAAA Trigger: GGCTGCTGCCGGCCTCACCCAGCATACCCCACATCT...AGCCACTCTTGCCCATGTCCTGGACCCTGGATGTGACTCCCTCTCTTCTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR-3UTR TCA 90 bp | CGTCCTGGCTTGGCACTAGCCTTGGGAGCCCTGGATGCAGTAGGCAGAAGGGTGAGCCTTTCTTCTCTGTaGTCAGGCGCACCAGGACTC | + |
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Preference number: 2 (lower is better) Translates to: RPGLALALGALDAVGRRVSLSSL*SGAPGL Trigger: GAGTCCTGGTGCGCCTGATCACAGAGAAGAAAGGCT...CACCCTTCTGCCTACTGCATCCAGGGCTCCCAAGGCTAGTGCCAAGCCAGGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGGGGAGGACGATGTGTGCACACCTGGCAGGGCCCTGGAGGTGAGCAGTTTTCCAGGACTTGGCCTTTaGATCTTGGTCCTCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: EGEDDVCTPGRALEVSSFPGLGL*ILVLSP Trigger: GGGACTGAGGACCAAGATGCAAAGGCCAAGTCCTGG...AAAACTGCTCACCTCCAGGGCCCTGCCAGGTGTGCACACATCGTCCTCCCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| 3UTR-3UTR GCA 90 bp | GAGGGGGAGGACGATGTGTGCACACCTGGCAGGGCCCTGGAGGTGAGCAGTTTTTCCCTCTATAGGGCCTaGCAGAAGAGAGGGAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: EGEDDVCTPGRALEVSSFSLYRA*QKRGSH Trigger: GTGACTCCCTCTCTTCTGGCAGGCCCTATAGAGGGA...AAAACTGCTCACCTCCAGGGCCCTGCCAGGTGTGCACACATCGTCCTCCCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGGGCGGACGGTCCCACCTCCAGGACTTGGCCTTTGCATCTTGGTCCTCACCCACCTCCAGGACTTaGCCTTTGCATCTTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: QWGGRSHLQDLAFASWSSPTSRT*PLHLGP Trigger: AGGACCAAGATGCAAAGGCCAAGTCCTGGAGGTGGG...TGAGGACCAAGATGCAAAGGCCAAGTCCTGGAGGTGGGACCGTCCGCCCCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR CAA 90 bp | GCCCAGGATTGGAACCCAGGTACTCTGCCACCAGTACAGGGCTCTTaGCTACCCCTTCCCTCTATAGGGCCTGCCAGAAGAGAGGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: AQDWNPGTLPPVQGS*LPLPSIGPARREGV Trigger: GACTCCCTCTCTTCTGGCAGGCCCTATAGAGGGAAGGGGTAGCAAAGAGCCCTGTACTGGTGGCAGAGTACCTGGGTTCCAATCCTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR-3UTR TCA 90 bp | GGCTCCTATGATGTGTTCAGGGCAGGCACAGGGTTACAGCACCCTGCATGGAAGAGGGAGATCACCCTCTaGAGGCCCAGCCTCCGTGAT | + |
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Preference number: 2 (lower is better) Translates to: GSYDVFRAGTGLQHPAWKREITL*RPSLRD Trigger: ATCACGGAGGCTGGGCCTTCAGAGGGTGATCTCCCT...CTTCCATGCAGGGTGCTGTAACCCTGTGCCTGCCCTGAACACATCATAGGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCTCAGTGGGGCGGACGGTCCCACCTCCAGGACTTGGCCTTTGCATCTTGGTAGGGGCAGGCACATaGATTAAACCCCTTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: ASSVGRTVPPPGLGLCILVGAGT*IKPLLK Trigger: CTTCAGAAGGGGTTTAATGCATGTGCCTGCCCCTAC...CAAGATGCAAAGGCCAAGTCCTGGAGGTGGGACCGTCCGCCCCACTGAGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAGAAGAGAGGGAGTCACATCCAGGGTCCAGGACATGGGCAAGAGTGGCTCCAGGGTCCAGGACATaGGCAAGAGTGGCTAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: LPEERESHPGSRTWARVAPGSRT*ARVASS Trigger: GGAACTAGCCACTCTTGCCCATGTCCTGGACCCTGG...AGCCACTCTTGCCCATGTCCTGGACCCTGGATGTGACTCCCTCTCTTCTGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCTATGATGTGTTCAGGGCAGGCACAGGGTTACAGCACCCTGCATGGAAGCTCCTCCACCAGGGCTaGGCCCAACTTCCTTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: GSYDVFRAGTGLQHPAWKLLHQG*AQLPFG Trigger: CCCAAAAGGAAGTTGGGCCCAGCCCTGGTGGAGGAG...CTTCCATGCAGGGTGCTGTAACCCTGTGCCTGCCCTGAACACATCATAGGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCATCACCATAATAGACAGTCCCATGGGAGCCATGAAGGCCAAGGCCCAGGACTCGCCCTGACGTCCTaGCTTGGCACTAGCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: RHHHNRQSHGSHEGQGPGLALTS*LGTSLG Trigger: CCCAAGGCTAGTGCCAAGCCAGGACGTCAGGGCGAG...TCCTGGGCCTTGGCCTTCATGGCTCCCATGGGACTGTCTATTATGGTGATGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR-3UTR GCA 90 bp | ACTCCTCCACCAAACCAGACCTCTAAGGGACAGAGGGCTCCTATGATGTGTTCACCTGCTCACGTGCTGTaGCGCAGGCTGCCTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TPPPNQTSKGQRAPMMCSPAHVL*RRLPPQ Trigger: CTGAGGAGGCAGCCTGCGGCACAGCACGTGAGCAGG...TGAACACATCATAGGAGCCCTCTGTCCCTTAGAGGTCTGGTTTGGTGGAGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCATTGAAAACCACAGGCCACAGGCACTCCCTAGCCTGCCTGTCTCCTCTCCCAAGGCACAAGCTTaGGGCCAGGTACAGATACCA | + |
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Preference number: 2 (lower is better) Translates to: RGIENHRPQALPSLPVSSPKAQA*GQVQIP Trigger: TGGTATCTGTACCTGGCCCCAAGCTTGTGCCTTGGG...AGAGGAGACAGGCAGGCTAGGGAGTGCCTGTGGCCTGTGGTTTTCAATGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| 3UTR-3UTR TCA 90 bp | GATTGGCAGTCACCCCTGCTACCCAAAACTCAGGCAGATACTGTACCACAGGGGGATAGGGTGGGCTCTTaGTCTCCTGCTCACGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: DWQSPLLPKTQADTVPQGDRVGS*SPAHVL Trigger: CAGCACGTGAGCAGGAGATCAAGAGCCCACCCTATC...CCCCTGTGGTACAGTATCTGCCTGAGTTTTGGGTAGCAGGGGTGACTGCCAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCCAAGGCCCAGGAAGCAGCAAAAACAGGCCAGATAAAGCTACTAATGGGGTCCTCAGTCCCAGCTaGAGCTCTCCCTCCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: EGQGPGSSKNRPDKATNGVLSPS*SSPSCR Trigger: CCTGCAGGAGGGAGAGCTGCAGCTGGGACTGAGGAC...CCCATTAGTAGCTTTATCTGGCCTGTTTTTGCTGCTTCCTGGGCCTTGGCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR-3UTR GCA 90 bp | CACATCCAGGGTCCAGGACATGGGCAAGAGTGGCTAGTTCCCAAGGCACAAGCTCCAGGACTTGGCCTTTaGATCTTGGTCCTCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: HIQGPGHGQEWLVPKAQAPGLGL*ILVLSP Trigger: GGGACTGAGGACCAAGATGCAAAGGCCAAGTCCTGG...AGCTTGTGCCTTGGGAACTAGCCACTCTTGCCCATGTCCTGGACCCTGGATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCATCACCATAATAGACAGTCCCATGGGAGCCATGAAGGCCAAGGCCCAGGAGAGCTGGAGAGGTCCTaGGAACTGAGTTCTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: RHHHNRQSHGSHEGQGPGELERS*ELSSPP Trigger: GGGAGGAGAACTCAGTTCCCAGGACCTCTCCAGCTC...TCCTGGGCCTTGGCCTTCATGGCTCCCATGGGACTGTCTATTATGGTGATGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR-3UTR GCA 90 bp | AGGCATCACCATAATAGACAGTCCCATGGGAGCCATGAAGGCCAAGGCCCAGGATGCAGCTCTCCCTCCTaGAGGAAGCCTTCAGAACCT | + |
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Preference number: 2 (lower is better) Translates to: RHHHNRQSHGSHEGQGPGCSSPS*RKPSEP Trigger: AGGTTCTGAAGGCTTCCTGCAGGAGGGAGAGCTGCA...TCCTGGGCCTTGGCCTTCATGGCTCCCATGGGACTGTCTATTATGGTGATGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
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| 3UTR-3UTR GCA 90 bp | TCCCCTACGTACCTAGGGATAAGCCCAGGATTGGAACCCAGGTACTCTGCCACCCTTCCTTTTGGGCTGTaGAATGGTAGCCCTTCCGCT | + |
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Preference number: 2 (lower is better) Translates to: SPTYLGISPGLEPRYSATLPFGL*NGSPSA Trigger: AGCGGAAGGGCTACCATTGCACAGCCCAAAAGGAAG...GGTGGCAGAGTACCTGGGTTCCAATCCTGGGCTTATCCCTAGGTACGTAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCCAGAAGAGAGGGAGTCACATCCAGGGTCCAGGACATGGGCAAGAGTGGCTCTCAGCTTTGTTCTCTaGTGGGGGCTTCAACCACTT | + |
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Preference number: 2 (lower is better) Translates to: LPEERESHPGSRTWARVALSFVL*WGLQPL Trigger: AAGTGGTTGAAGCCCCCAGCAGAGAACAAAGCTGAG...AGCCACTCTTGCCCATGTCCTGGACCCTGGATGTGACTCCCTCTCTTCTGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGATGAGACGAGGAGCCACCTCTGCCTATTTCCCTGGTTTCAGAGGAAGGTGACTCAGCCCAGAATCTaGAAAGAGCTGGAGAGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: EDETRSHLCLFPWFQRKVTQPRI*KELERS Trigger: GGACCTCTCCAGCTCTTTGCAGATTCTGGGCTGAGT...CACCTTCCTCTGAAACCAGGGAAATAGGCAGAGGTGGCTCCTCGTCTCATCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR-3UTR TCA 90 bp | TCAGCTTTGTTCTCTGCTGGGGGCTTCAACCACTTAGTATGGCTCCCACCACTTATGGTAATCTCGCCCTaGCGTCCTGGCTTGGCACTA | + |
|
Preference number: 2 (lower is better) Translates to: SALFSAGGFNHLVWLPPLMVISP*RPGLAL Trigger: TAGTGCCAAGCCAGGACGTCAGGGCGAGATTACCAT...AAGTGGTGGGAGCCATACTAAGTGGTTGAAGCCCCCAGCAGAGAACAAAGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR-3UTR GCA 90 bp | ACTCCTCCACCAAACCAGACCTCTAAGGGACAGAGGGCTCCTATGATGTGTTCATGCAGCTCTCCCTCCTaGAGGAAGCCTTCAGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: TPPPNQTSKGQRAPMMCSCSSPS*RKPSEP Trigger: AGGTTCTGAAGGCTTCCTGCAGGAGGGAGAGCTGCA...TGAACACATCATAGGAGCCCTCTGTCCCTTAGAGGTCTGGTTTGGTGGAGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| 3UTR CAA 90 bp | ATGGGAACACATTCAATCACACATATGGCTCAGCCTGTATTTCTATaGGGGAACCTGGCCTCTGGGGACCTCGGTGAGGATGAGACGAGG | + |
|
Preference number: 2 (lower is better) Translates to: MGTHSITHMAQPVFL*GNLASGDLGEDETR Trigger: CCTCGTCTCATCCTCACCGAGGTCCCCAGAGGCCAGGTTCCCCAATAGAAATACAGGCTGAGCCATATGTGTGATTGAATGTGTTCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR-3UTR GCA 90 bp | GAAGGCCAAGGCCCAGGAAGCAGCAAAAACAGGCCAGATAAAGCTACTAATGGGACTCAGCCCAGAATCTaGAAAGAGCTGGAGAGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: EGQGPGSSKNRPDKATNGTQPRI*KELERS Trigger: GGACCTCTCCAGCTCTTTGCAGATTCTGGGCTGAGT...CCCATTAGTAGCTTTATCTGGCCTGTTTTTGCTGCTTCCTGGGCCTTGGCCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| 3UTR-3UTR GCA 90 bp | AATCACACATATGGCTCAGCCTGTATTTCTATTGGGGAACCTGGCCTCTGGGGAACGAGGAGCCACCTCTaGCTATTTCCCTGGTTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: NHTYGSACISIGEPGLWGTRSHL*LFPWFQ Trigger: CTGAAACCAGGGAAATAGGCAGAGGTGGCTCCTCGT...TCCCCAGAGGCCAGGTTCCCCAATAGAAATACAGGCTGAGCCATATGTGTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR-3UTR CCA 90 bp | AATCACACATATGGCTCAGCCTGTATTTCTATTGGGGAACCTGGCCTCTGGGGATTGGCCTTTGCATCTTaGTCCTCAGTCCCAGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: NHTYGSACISIGEPGLWGLAFAS*SSVPAA Trigger: TGCAGCTGGGACTGAGGACCAAGATGCAAAGGCCAA...TCCCCAGAGGCCAGGTTCCCCAATAGAAATACAGGCTGAGCCATATGTGTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR-3UTR CCA 90 bp | AATCACACATATGGCTCAGCCTGTATTTCTATTGGGGAACCTGGCCTCTGGGGATATTACTCAAGTGTGTaGGGCTGGAGATGTAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: NHTYGSACISIGEPGLWGYYSSV*GWRCRG Trigger: GCCCCTACATCTCCAGCCCCACACACTTGAGTAATA...TCCCCAGAGGCCAGGTTCCCCAATAGAAATACAGGCTGAGCCATATGTGTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR-3UTR GCA 90 bp | AGCAAAAACAGGCCAGATAAAGCTACTAATGGGAGGGTAGCAAAGTCAAGCTCCATTGGCAGTCACCCCTaGTACCCAAAACTCAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SKNRPDKATNGRVAKSSSIGSHP*YPKLRQ Trigger: CTGCCTGAGTTTTGGGTAGCAGGGGTGACTGCCAAT...GGAGCTTGACTTTGCTACCCTCCCATTAGTAGCTTTATCTGGCCTGTTTTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR-3UTR CCA 90 bp | AATCACACATATGGCTCAGCCTGTATTTCTATTGGGGAACCTGGCCTCTGGGGATCAATAAATAAGAAATaGGATGGGCAGTGGGCCCCG | + |
|
Preference number: 2 (lower is better) Translates to: NHTYGSACISIGEPGLWGSINKK*DGQWAP Trigger: CGGGGCCCACTGCCCATCCCATTTCTTATTTATTGA...TCCCCAGAGGCCAGGTTCCCCAATAGAAATACAGGCTGAGCCATATGTGTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR-3UTR CCA 90 bp | CACATAGCGGTTCTCCTCAGCTTTGTTCTCTGCTGGGGGCTTCAACCACTTAGTAAAAGACAGGAACGATaGCAATCACTGCATACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: HIAVLLSFVLCWGLQPLSKRQER*QSLHTG Trigger: CCCAGTATGCAGTGATTGCCATCGTTCCTGTCTTTT...ACTAAGTGGTTGAAGCCCCCAGCAGAGAACAAAGCTGAGGAGAACCGCTATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR-3UTR CCA 90 bp | CACATAGCGGTTCTCCTCAGCTTTGTTCTCTGCTGGGGGCTTCAACCACTTAGTCAGATAACAATGAACTaGTCCGCTGCTCAGGAATAC | + |
|
Preference number: 2 (lower is better) Translates to: HIAVLLSFVLCWGLQPLSQITMN*SAAQEY Trigger: GTATTCCTGAGCAGCGGACCAGTTCATTGTTATCTG...ACTAAGTGGTTGAAGCCCCCAGCAGAGAACAAAGCTGAGGAGAACCGCTATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR GCA 72 bp | GCTCTTGATCTCCTGCTCACGTGCTGTGCCGCAGGCTaGCTCCTCAGTGGGGCGGACGGTCCCACCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ALDLLLTCCAAG*LLSGADGPTSR Trigger: CCTGGAGGTGGGACCGTCCGCCCCACTGAGGAGGCAGCCTGCGGCACAGCACGTGAGCAGGAGATCAAGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| 3UTR GCA 72 bp | CACTGCATACTGGGCAGCCGTCTCCTCAGGACCGCCTaGCCGAGTGCCATTCCCGGGCTGCCGAGGTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: HCILGSRLLRTA*PSAIPGLPRFT Trigger: GGTGAACCTCGGCAGCCCGGGAATGGCACTCGGGCAGGCGGTCCTGAGGAGACGGCTGCCCAGTATGCAGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR CCA 72 bp | CCTGCTCACGTGCTGTGCCGCAGGCTGCCTCCTCAGTaGGGCGGACGGTCCCACCTCCAGGACTTGGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PAHVLCRRLPPQ*GGRSHLQDLAF Trigger: AAAGGCCAAGTCCTGGAGGTGGGACCGTCCGCCCCACTGAGGAGGCAGCCTGCGGCACAGCACGTGAGCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCAGGAGTGGTGGCAGCTGCTGCCTCAGGAGACAGCAGCACCTCTGGCCACGGGCCCAACTTCCTTTaGGGCTGTGCAATGGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GAGVVAAAASGDSSTSGHGPNFL*GCAMVA Trigger: GGCTACCATTGCACAGCCCAAAAGGAAGTTGGGCCC...GTGGCCAGAGGTGCTGCTGTCTCCTGAGGCAGCAGCTGCCACCACTCCTGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCAGGAGTGGTGGCAGCTGCTGCCTCAGGAGACAGCAGCACCTCTGGCCACTCCAGGACTTGGCCTTaGCATCTTGGTCCTCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GAGVVAAAASGDSSTSGHSRTWP*HLGPQS Trigger: GGACTGAGGACCAAGATGCAAAGGCCAAGTCCTGGA...GTGGCCAGAGGTGCTGCTGTCTCCTGAGGCAGCAGCTGCCACCACTCCTGCTCC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAACCTGGCCTCTGGGGACCTCGGTGAGGATGAGACGAGGAGCCACCTCTGCCTGTACCACAGGGGCATaGAAAACCACAGGCCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: GTWPLGTSVRMRRGATSACTTGA*KTTGHR Trigger: CCTGTGGCCTGTGGTTTTCAATGCCCCTGTGGTACA...GGCAGAGGTGGCTCCTCGTCTCATCCTCACCGAGGTCCCCAGAGGCCAGGTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR CCA 72 bp | CTCTTCCCACAGCTCCAGAGCTTGAGGGCAGCAGGGTaGACTGAGGCTCTGCACCAGAGAGCCCTGTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LFPQLQSLRAAG*TEALHQRALSK Trigger: CTTGGACAGGGCTCTCTGGTGCAGAGCCTCAGTCCACCCTGCTGCCCTCAAGCTCTGGAGCTGTGGGAAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR CCA 72 bp | GGGGCAGGGCAACAGCAGGTTTCAATAAATAAGAAATaGGATGGGCAGTGGGCCCCGCGCCTGCACGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GAGQQQVSINKK*DGQWAPRLHGP Trigger: GGGGCCGTGCAGGCGCGGGGCCCACTGCCCATCCCATTTCTTATTTATTGAAACCTGCTGTTGCCCTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR TCA 72 bp | CGGAACCTGCCCACAGACAAGATGGTAATCTCGCCCTaGCGTCCTGGCTTGGCACTAGCCTTGGGAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RNLPTDKMVISP*RPGLALALGAL Trigger: CAGGGCTCCCAAGGCTAGTGCCAAGCCAGGACGTCAGGGCGAGATTACCATCTTGTCTGTGGGCAGGTTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGGGGCGGACGGTCCCACCTCCAGGACTTGGCCTTTGCATCTTGGTCCTCATCCAGGACTTGGCCTTaGCATCTTGGTCCTCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QWGGRSHLQDLAFASWSSSRTWP*HLGPQS Trigger: GGACTGAGGACCAAGATGCAAAGGCCAAGTCCTGGA...TGAGGACCAAGATGCAAAGGCCAAGTCCTGGAGGTGGGACCGTCCGCCCCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCAGGACATGGGCAAGAGTGGCTAGTTCCCAAGGCACAAGCTTGGGGCCAGGGGATAAGCCCAGGATaGGAACCCAGGTACTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GPGHGQEWLVPKAQAWGQGISPG*EPRYSA Trigger: GGCAGAGTACCTGGGTTCCAATCCTGGGCTTATCCC...CTGGCCCCAAGCTTGTGCCTTGGGAACTAGCCACTCTTGCCCATGTCCTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| 3UTR TCA 72 bp | AAGACCAGGCTGTGGGGAGTCAGGGAGATCACCCTCTaGAGGCCCAGCCTCCGTGATGGTCTTCACCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: KTRLWGVREITL*RPSLRDGLHLR Trigger: TCTGAGGTGAAGACCATCACGGAGGCTGGGCCTTCAGAGGGTGATCTCCCTGACTCCCCACAGCCTGGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR GCA 72 bp | TCAGAGGAAGGTGCTGATGAGGGGGAGGACGATGTGTaGACACCTGGCAGGGCCCTGGAGGTGAGCAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SEEGADEGEDDV*TPGRALEVSSF Trigger: AAAACTGCTCACCTCCAGGGCCCTGCCAGGTGTGCACACATCGTCCTCCCCCTCATCAGCACCTTCCTCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR CCA 72 bp | GGGAGTCACATCCAGGGTCCAGGACATGGGCAAGAGTaGCTAGTTCCCAAGGCACAAGCTTGGGGCCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: GSHIQGPGHGQE*LVPKAQAWGQV Trigger: TACCTGGCCCCAAGCTTGTGCCTTGGGAACTAGCCACTCTTGCCCATGTCCTGGACCCTGGATGTGACTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| 3UTR CCA 72 bp | GCCCACAGACAAGATGGTAATCTCGCCCTGACGTCCTaGCTTGGCACTAGCCTTGGGAGCCCTGGATGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: AHRQDGNLALTS*LGTSLGSPGCS Trigger: ACTGCATCCAGGGCTCCCAAGGCTAGTGCCAAGCCAGGACGTCAGGGCGAGATTACCATCTTGTCTGTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR CCA 72 bp | GCTTTGTTCTCTGCTGGGGGCTTCAACCACTTAGTATaGCTCCCACCACTTCCCAGCAGTGCCCGCTGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: ALFSAGGFNHLV*LPPLPSSARCS Trigger: CGAGCAGCGGGCACTGCTGGGAAGTGGTGGGAGCCATACTAAGTGGTTGAAGCCCCCAGCAGAGAACAAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR-3UTR CAA 90 bp | GACGATGTGTGCACACCTGGCAGGGCCCTGGAGGTGAGCAGTTTTCAGAGAGGAGGGATAAGCCCAGGATaGGAACCCAGGTACTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: DDVCTPGRALEVSSFQRGGISPG*EPRYSA Trigger: GGCAGAGTACCTGGGTTCCAATCCTGGGCTTATCCC...TCCTCTCTGAAAACTGCTCACCTCCAGGGCCCTGCCAGGTGTGCACACATCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTATTTCCCTGGTTTCAGAGGAAGGTGCTGATGAGGGGGAGGACGATGTGTCCACAGCTCCAGAGCTaGAGGGCAGCAGGGTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: CLFPWFQRKVLMRGRTMCPQLQS*RAAGWT Trigger: AGTCCACCCTGCTGCCCTCAAGCTCTGGAGCTGTGG...ACACATCGTCCTCCCCCTCATCAGCACCTTCCTCTGAAACCAGGGAAATAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCCTATGATGTGTTCAGGGCAGGCACAGGGTTACAGCACCCTGCATGGAAGCGGTTCTCCTCAGCTTaGTTCTCTGCTGGGGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GSYDVFRAGTGLQHPAWKRFSSA*FSAGGF Trigger: GAAGCCCCCAGCAGAGAACAAAGCTGAGGAGAACCG...CTTCCATGCAGGGTGCTGTAACCCTGTGCCTGCCCTGAACACATCATAGGAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR GCA 72 bp | ACAGGGCTCTTTGCTACCCCTTCCCTCTATAGGGCCTaGCAGAAGAGAGGGAGTCACATCCAGGGTCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TGLFATPSLYRA*QKRGSHIQGPG Trigger: TCCTGGACCCTGGATGTGACTCCCTCTCTTCTGGCAGGCCCTATAGAGGGAAGGGGTAGCAAAGAGCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| 3UTR GCA 72 bp | GGGGACCTCGGTGAGGATGAGACGAGGAGCCACCTCTaGCTATTTCCCTGGTTTCAGAGGAAGGTGCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: GDLGEDETRSHL*LFPWFQRKVLM Trigger: CATCAGCACCTTCCTCTGAAACCAGGGAAATAGGCAGAGGTGGCTCCTCGTCTCATCCTCACCGAGGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR GCA 72 bp | CCCCATGAGACAAAAGACAGGAACGATGGCAATCACTaGATACTGGGCAGCCGTCTCCTCAGGACCGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PHETKDRNDGNH*ILGSRLLRTAC Trigger: GCAGGCGGTCCTGAGGAGACGGCTGCCCAGTATGCAGTGATTGCCATCGTTCCTGTCTTTTGTCTCATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR CCA 72 bp | AGACAAAAGACAGGAACGATGGCAATCACTGCATACTaGGCAGCCGTCTCCTCAGGACCGCCTGCCCGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RQKTGTMAITAY*AAVSSGPPARV Trigger: CACTCGGGCAGGCGGTCCTGAGGAGACGGCTGCCCAGTATGCAGTGATTGCCATCGTTCCTGTCTTTTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR TCA 72 bp | CACCAAACCAGACCTCTAAGGGACAGAGGGCTCCTATaGTGTGTTCAGGGCAGGCACAGGGTTACAGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: HQTRPLRDRGLL*CVQGRHRVTAP Trigger: GGGTGCTGTAACCCTGTGCCTGCCCTGAACACATCATAGGAGCCCTCTGTCCCTTAGAGGTCTGGTTTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| 3UTR GCA 72 bp | CCGGACCACATAGCGGTTCTCCTCAGCTTTGTTCTCTaGTGGGGGCTTCAACCACTTAGTATGGCTCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: PDHIAVLLSFVL*WGLQPLSMAPT Trigger: GGTGGGAGCCATACTAAGTGGTTGAAGCCCCCAGCAGAGAACAAAGCTGAGGAGAACCGCTATGTGGTCCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR CCA 72 bp | CATGGGCAAGAGTGGCTAGTTCCCAAGGCACAAGCTTaGGGCCAGGTACAGATACCACTCCTCCACCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: HGQEWLVPKAQA*GQVQIPLLHQT Trigger: GGTTTGGTGGAGGAGTGGTATCTGTACCTGGCCCCAAGCTTGTGCCTTGGGAACTAGCCACTCTTGCCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| 3UTR CCA 72 bp | CACATATGGCTCAGCCTGTATTTCTATTGGGGAACCTaGCCTCTGGGGACCTCGGTGAGGATGAGACGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HIWLSLYFYWGT*PLGTSVRMRRG Trigger: TCCTCGTCTCATCCTCACCGAGGTCCCCAGAGGCCAGGTTCCCCAATAGAAATACAGGCTGAGCCATATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR TCA 72 bp | AGTCAGGGAGATCACCCTCTGAAGGCCCAGCCTCCGTaGTGGTCTTCACCTCAGATAACAATGAACTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SQGDHPLKAQPP*WSSPQITMNWS Trigger: GGACCAGTTCATTGTTATCTGAGGTGAAGACCATCACGGAGGCTGGGCCTTCAGAGGGTGATCTCCCTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR GCA 72 bp | GCAGAGACTAAGACAGGCTGGATTGGCAGTCACCCCTaGTACCCAAAACTCAGGCAGATACTGTACCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: AETKTGWIGSHP*YPKLRQILYHR Trigger: CCTGTGGTACAGTATCTGCCTGAGTTTTGGGTAGCAGGGGTGACTGCCAATCCAGCCTGTCTTAGTCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR GCA 72 bp | ATGGTCTTCACCTCAGATAACAATGAACTGGTCCGCTaGTCAGGAATACGAGCCACACGGAACCTGCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: MVFTSDNNELVR*SGIRATRNLPT Trigger: TGTGGGCAGGTTCCGTGTGGCTCGTATTCCTGAGCAGCGGACCAGTTCATTGTTATCTGAGGTGAAGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| 3UTR-3UTR CAA 90 bp | AATCACACATATGGCTCAGCCTGTATTTCTATTGGGGAACCTGGCCTCTGGGGACCAGTACAGGGCTCTTaGCTACCCCTTCCCTCTATA | + |
|
Preference number: 3 (lower is better) Translates to: NHTYGSACISIGEPGLWGPVQGS*LPLPSI Trigger: TATAGAGGGAAGGGGTAGCAAAGAGCCCTGTACTGG...TCCCCAGAGGCCAGGTTCCCCAATAGAAATACAGGCTGAGCCATATGTGTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR TCA 90 bp | GATGGTAATCTCGCCCTGACGTCCTGGCTTGGCACTAGCCTTGGGAGCCCTGGACCGGCCCCGCCGCCCTaGCTCCATGCTGGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DGNLALTSWLGTSLGSPGPAPPP*LHAGSL Trigger: GAGACTGCCAGCATGGAGTCAGGGCGGCGGGGCCGG...TCCAGGGCTCCCAAGGCTAGTGCCAAGCCAGGACGTCAGGGCGAGATTACCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| CDS-3UTR CCA 90 bp | TTGGGGAACCTGGCCTCTGGGGACCTCGGTGAGGATGAGACGAGGAGCCACCTCAGATGTGGGGTATGCTaGGTGAGGCCGGCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGNLASGDLGEDETRSHLRCGVC*VRPAAA Trigger: GGCTGCTGCCGGCCTCACCCAGCATACCCCACATCT...GAGGTGGCTCCTCGTCTCATCCTCACCGAGGTCCCCAGAGGCCAGGTTCCCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR TCA 90 bp | GGCTCCTATGATGTGTTCAGGGCAGGCACAGGGTTACAGCACCCTGCATGGAAGGTGGGGTATGCTGGGTaGGGCCGGCAGCAGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSYDVFRAGTGLQHPAWKVGYAG*GRQQPG Trigger: CCCAGGCTGCTGCCGGCCTCACCCAGCATACCCCAC...CTTCCATGCAGGGTGCTGTAACCCTGTGCCTGCCCTGAACACATCATAGGAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR GCA 90 bp | GAGGGGGAGGACGATGTGTGCACACCTGGCAGGGCCCTGGAGGTGAGCAGTTTTAGTGAGGCCAGGCCCTaGACAGTGTGCAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGEDDVCTPGRALEVSSFSEARP*TVCRWW Trigger: CCACCACCTGCACACTGTGCAGGGCCTGGCCTCACT...AAAACTGCTCACCTCCAGGGCCCTGCCAGGTGTGCACACATCGTCCTCCCCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR TCA 90 bp | CTCCTCAGTGGGGCGGACGGTCCCACCTCCAGGACTTGGCCTTTGCATCTTGGTAGGGAGATCACCCTCTaGAGGCCCAGCCTCCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSGADGPTSRTWPLHLGREITL*RPSLRD Trigger: ATCACGGAGGCTGGGCCTTCAGAGGGTGATCTCCCT...ACCAAGATGCAAAGGCCAAGTCCTGGAGGTGGGACCGTCCGCCCCACTGAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCTCAGTGGGGCGGACGGTCCCACCTCCAGGACTTGGCCTTTGCATCTGCCGCCCTGACTCCATaGTGGCAGTCTCCACACATT | + |
|
Preference number: 4 (lower is better) Translates to: LPPQWGGRSHLQDLAFASAALTP*WQSPHI Trigger: AATGTGTGGAGACTGCCAGCATGGAGTCAGGGCGGC...AGATGCAAAGGCCAAGTCCTGGAGGTGGGACCGTCCGCCCCACTGAGGAGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| CDS-3UTR TCA 90 bp | TTGGGGAACCTGGCCTCTGGGGACCTCGGTGAGGATGAGACGAGGAGCCACCTCATGGTAATCTCGCCCTaGCGTCCTGGCTTGGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: LGNLASGDLGEDETRSHLMVISP*RPGLAL Trigger: TAGTGCCAAGCCAGGACGTCAGGGCGAGATTACCAT...GAGGTGGCTCCTCGTCTCATCCTCACCGAGGTCCCCAGAGGCCAGGTTCCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR GCA 90 bp | CTCCTCAGTGGGGCGGACGGTCCCACCTCCAGGACTTGGCCTTTGCATCTTGGTCTGGGTCAGGCTCTTTaGCAGGTGGACACAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSGADGPTSRTWPLHLGLGQAL*QVDTAK Trigger: CTTGGCTGTGTCCACCTGGCAAAGAGCCTGACCCAG...ACCAAGATGCAAAGGCCAAGTCCTGGAGGTGGGACCGTCCGCCCCACTGAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| CDS-3UTR GCA 90 bp | GGAACCTGGCCTCTGGGGACCTCGGTGAGGATGAGACGAGGAGCCACCTCTGCCCATTGTATCATGAGTTaGTGTGCCAGCCTGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTWPLGTSVRMRRGATSAHCIMS*CASLGL Trigger: GAGGCCCAGGCTGGCACAGCAACTCATGATACAATG...GGCAGAGGTGGCTCCTCGTCTCATCCTCACCGAGGTCCCCAGAGGCCAGGTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR CCA 90 bp | GACGATGTGTGCACACCTGGCAGGGCCCTGGAGGTGAGCAGTTTTCAGAGAGGATGGGAGCAGGAGTGGTaGCAGCTGCTGCCTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DDVCTPGRALEVSSFQRGWEQEW*QLLPQE Trigger: CTCCTGAGGCAGCAGCTGCCACCACTCCTGCTCCCA...TCCTCTCTGAAAACTGCTCACCTCCAGGGCCCTGCCAGGTGTGCACACATCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCTCAGTGGGGCGGACGGTCCCACCTCCAGGACTTGGCCTTTGCATCTCATTGTATCATGAGTTaGTGTGCCAGCCTGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPPQWGGRSHLQDLAFASHCIMS*CASLGL Trigger: GAGGCCCAGGCTGGCACAGCAACTCATGATACAATG...AGATGCAAAGGCCAAGTCCTGGAGGTGGGACCGTCCGCCCCACTGAGGAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| CDS-3UTR CCA 90 bp | GGAACCTGGCCTCTGGGGACCTCGGTGAGGATGAGACGAGGAGCCACCTCTGCCAGGCTCTTTGCCAGGTaGACACAGCCAAGGAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GTWPLGTSVRMRRGATSARLFAR*TQPRSY Trigger: ATAACTCCTTGGCTGTGTCCACCTGGCAAAGAGCCT...GGCAGAGGTGGCTCCTCGTCTCATCCTCACCGAGGTCCCCAGAGGCCAGGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGAGTGGTGGCAGCTGCTGCCTCAGGAGACAGCAGCACCTCTGGCCACAGGCTCTTTGCCAGGTaGACACAGCCAAGGAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GAGVVAAAASGDSSTSGHRLFAR*TQPRSY Trigger: ATAACTCCTTGGCTGTGTCCACCTGGCAAAGAGCCT...GTGGCCAGAGGTGCTGCTGTCTCCTGAGGCAGCAGCTGCCACCACTCCTGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| CDS-3UTR TCA 90 bp | GATTGGCAGTCACCCCTGCTACCCAAAACTCAGGCAGATACTGTACCACAGGGGGTGTGCAGGTGGTGGTaGTGCGGGCAGATGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DWQSPLLPKTQADTVPQGVCRWW*CGQMWG Trigger: ACCCCACATCTGCCCGCATCACCACCACCTGCACAC...CCCCTGTGGTACAGTATCTGCCTGAGTTTTGGGTAGCAGGGGTGACTGCCAATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR TCA 90 bp | GGTCCAGGACATGGGCAAGAGTGGCTAGTTCCCAAGGCACAAGCTTGGGGCCAGAAGGCCCAGCCTCCGTaGTGGTCTTCACCTCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GPGHGQEWLVPKAQAWGQKAQPP*WSSPQI Trigger: TATCTGAGGTGAAGACCATCACGGAGGCTGGGCCTT...CTGGCCCCAAGCTTGTGCCTTGGGAACTAGCCACTCTTGCCCATGTCCTGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGAAGAGAGGGAGTCACATCCAGGGTCCAGGACATGGGCAAGAGTGGCTCTGGGTCAGGCTCTTTaGCAGGTGGACACAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPEERESHPGSRTWARVALGQAL*QVDTAK Trigger: CTTGGCTGTGTCCACCTGGCAAAGAGCCTGACCCAG...AGCCACTCTTGCCCATGTCCTGGACCCTGGATGTGACTCCCTCTCTTCTGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGCAGGCACAGGGTTACAGCACCCTGCATGGAAGTAACCGGGACTGCAGGGCTCCTCCAGGGCCGCTaGATTCTCTTTCTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGRHRVTAPCMEVTGTAGLLQGR*ILFLLC Trigger: ACAGAGAAGAAAGAGAATGCAGCGGCCCTGGAGGAG...CCCTGCAGTCCCGGTTACTTCCATGCAGGGTGCTGTAACCCTGTGCCTGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR GCA 90 bp | GAGGATGAGACGAGGAGCCACCTCTGCCTATTTCCCTGGTTTCAGAGGAAGGTGGGCAGATGTGGGGTATaGTGGGTGAGGCCGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EDETRSHLCLFPWFQRKVGRCGV*WVRPAA Trigger: TGCTGCCGGCCTCACCCAGCATACCCCACATCTGCC...CACCTTCCTCTGAAACCAGGGAAATAGGCAGAGGTGGCTCCTCGTCTCATCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR GCA 90 bp | TGGGCAAGAGTGGCTAGTTCCCAAGGCACAAGCTTGGGGCCAGGTACAGATACCAGTGGTGGCAGCTGCTaGCTCAGGAGACAGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WARVASSQGTSLGPGTDTSGGSC*LRRQQH Trigger: GTGCTGCTGTCTCCTGAGGCAGCAGCTGCCACCACT...GGTATCTGTACCTGGCCCCAAGCTTGTGCCTTGGGAACTAGCCACTCTTGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGGACATGGGCAAGAGTGGCTAGTTCCCAAGGCACAAGCTTGGGGCCAGTTATTGGTGTTGGAGTaGCCAGAGGCCAGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPGHGQEWLVPKAQAWGQLLVLE*PEARAA Trigger: TGCTGCCCTGGCCTCTGGCCACTCCAACACCAATAA...CTGGCCCCAAGCTTGTGCCTTGGGAACTAGCCACTCTTGCCCATGTCCTGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| CDS-3UTR CCA 90 bp | GGAACCTGGCCTCTGGGGACCTCGGTGAGGATGAGACGAGGAGCCACCTCTGCCCAATGGTGTCCTCGTTaGCATCTTCAGTCCTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTWPLGTSVRMRRGATSAQWCPR*HLQSYR Trigger: CCTATAGGACTGAAGATGCCAACGAGGACACCATTG...GGCAGAGGTGGCTCCTCGTCTCATCCTCACCGAGGTCCCCAGAGGCCAGGTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR TCA 90 bp | GCTCCTATGATGTGTTCAGGGCAGGCACAGGGTTACAGCACCCTGCATGGAAGTGGTAGCCCTTCCGCTTaGGCAGGTTGCACACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: APMMCSGQAQGYSTLHGSGSPSA*AGCTPG Trigger: TCCTGGTGTGCAACCTGCTCAAGCGGAAGGGCTACC...ACTTCCATGCAGGGTGCTGTAACCCTGTGCCTGCCCTGAACACATCATAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR GCA 90 bp | CACATCCAGGGTCCAGGACATGGGCAAGAGTGGCTAGTTCCCAAGGCACAAGCTTATCATGAGTTGCTGTaGCAGCCTGGGCCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HIQGPGHGQEWLVPKAQAYHELL*QPGPPA Trigger: GGCTGGAGGCCCAGGCTGGCACAGCAACTCATGATA...AGCTTGTGCCTTGGGAACTAGCCACTCTTGCCCATGTCCTGGACCCTGGATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGGGGCGGACGGTCCCACCTCCAGGACTTGGCCTTTGCATCTTGGTCCTCACCAAACCACCCATGCTaGCAGTCTCCACACATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QWGGRSHLQDLAFASWSSPNHPC*QSPHIV Trigger: TACAATGTGTGGAGACTGCCAGCATGGGTGGTTTGG...TGAGGACCAAGATGCAAAGGCCAAGTCCTGGAGGTGGGACCGTCCGCCCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR CCA 90 bp | CTCCTCAGTGGGGCGGACGGTCCCACCTCCAGGACTTGGCCTTTGCATCTTGGTTACTTGGAGGTGCCTTaGAACATGGCTGACACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSGADGPTSRTWPLHLGYLEVP*NMADTE Trigger: TTCCGTGTCAGCCATGTTCCAAGGCACCTCCAAGTA...ACCAAGATGCAAAGGCCAAGTCCTGGAGGTGGGACCGTCCGCCCCACTGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR CCA 90 bp | GATTGGCAGTCACCCCTGCTACCCAAAACTCAGGCAGATACTGTACCACAGGGGCTCCTCCACCAGGGCTaGGCCCAACTTCCTTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DWQSPLLPKTQADTVPQGLLHQG*AQLPFG Trigger: CCCAAAAGGAAGTTGGGCCCAGCCCTGGTGGAGGAG...CCCCTGTGGTACAGTATCTGCCTGAGTTTTGGGTAGCAGGGGTGACTGCCAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR GCA 90 bp | GATTGGCAGTCACCCCTGCTACCCAAAACTCAGGCAGATACTGTACCACAGGGGGTTGCTACTGGTACCTaGTGCCACTTCGACGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: DWQSPLLPKTQADTVPQGVATGT*CHFDAT Trigger: CGTGGCGTCGAAGTGGCAGCAGGTACCAGTAGCAAC...CCCCTGTGGTACAGTATCTGCCTGAGTTTTGGGTAGCAGGGGTGACTGCCAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR CCA 90 bp | AAACTCAGGCAGATACTGTACCACAGGGGCATTGAAAACCACAGGCCACAGGCACTCGCCCTGACGTCCTaGCTTGGCACTAGCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLRQILYHRGIENHRPQALALTS*LGTSLG Trigger: CCCAAGGCTAGTGCCAAGCCAGGACGTCAGGGCGAG...TGCCTGTGGCCTGTGGTTTTCAATGCCCCTGTGGTACAGTATCTGCCTGAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| 3UTR CAA 72 bp | TGGAACCCAGGTACTCTGCCACCAGTACAGGGCTCTTaGCTACCCCTTCCCTCTATAGGGCCTGCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WNPGTLPPVQGS*LPLPSIGPARR Trigger: TCTTCTGGCAGGCCCTATAGAGGGAAGGGGTAGCAAAGAGCCCTGTACTGGTGGCAGAGTACCTGGGTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| CDS-3UTR CCA 90 bp | TGGGCAAGAGTGGCTAGTTCCCAAGGCACAAGCTTGGGGCCAGGTACAGATACCAGGTGCCTTGGAACATaGCTGACACGGAACATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WARVASSQGTSLGPGTDTRCLGT*LTRNMR Trigger: CCTCATGTTCCGTGTCAGCCATGTTCCAAGGCACCT...GGTATCTGTACCTGGCCCCAAGCTTGTGCCTTGGGAACTAGCCACTCTTGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR CCA 90 bp | TGTCTCCTCTTCCCACAGCTCCAGAGCTTGAGGGCAGCAGGGTGGACTGAGGCTAGCTTTGTTCTCTGCTaGGGGCTTCAACCACTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLFPQLQSLRAAGWTEASFVLC*GLQPLS Trigger: ACTAAGTGGTTGAAGCCCCCAGCAGAGAACAAAGCT...AGCCTCAGTCCACCCTGCTGCCCTCAAGCTCTGGAGCTGTGGGAAGAGGAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR GCA 90 bp | GACGATGTGTGCACACCTGGCAGGGCCCTGGAGGTGAGCAGTTTTCAGAGAGGAAAGTTCTGCATAATGTaGCCTGTCCTGGATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DDVCTPGRALEVSSFQRGKFCIM*PVLDLG Trigger: ACCCAGATCCAGGACAGGGCACATTATGCAGAACTT...TCCTCTCTGAAAACTGCTCACCTCCAGGGCCCTGCCAGGTGTGCACACATCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR GCA 90 bp | GAAGGCCAAGGCCCAGGAAGCAGCAAAAACAGGCCAGATAAAGCTACTAATGGGTATCATGAGTTGCTGTaGCAGCCTGGGCCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EGQGPGSSKNRPDKATNGYHELL*QPGPPA Trigger: GGCTGGAGGCCCAGGCTGGCACAGCAACTCATGATA...CCCATTAGTAGCTTTATCTGGCCTGTTTTTGCTGCTTCCTGGGCCTTGGCCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| CDS-3UTR GCA 90 bp | AGGCATCACCATAATAGACAGTCCCATGGGAGCCATGAAGGCCAAGGCCCAGGACTTCCTTTTGGGCTGTaGAATGGTAGCCCTTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RHHHNRQSHGSHEGQGPGLPFGL*NGSPSA Trigger: AGCGGAAGGGCTACCATTGCACAGCCCAAAAGGAAG...TCCTGGGCCTTGGCCTTCATGGCTCCCATGGGACTGTCTATTATGGTGATGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR GCA 90 bp | TGGGCAAGAGTGGCTAGTTCCCAAGGCACAAGCTTGGGGCCAGGTACAGATACCCTCAGCTTTGTTCTCTaGTGGGGGCTTCAACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: WARVASSQGTSLGPGTDTLSFVL*WGLQPL Trigger: AAGTGGTTGAAGCCCCCAGCAGAGAACAAAGCTGAG...GGTATCTGTACCTGGCCCCAAGCTTGTGCCTTGGGAACTAGCCACTCTTGCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR CCA 90 bp | TGCCTATTTCCCTGGTTTCAGAGGAAGGTGCTGATGAGGGGGAGGACGATGTGTTTATTGGTGTTGGAGTaGCCAGAGGCCAGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLFPWFQRKVLMRGRTMCLLVLE*PEARAA Trigger: TGCTGCCCTGGCCTCTGGCCACTCCAACACCAATAA...ACACATCGTCCTCCCCCTCATCAGCACCTTCCTCTGAAACCAGGGAAATAGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR CCA 90 bp | AATCACACATATGGCTCAGCCTGTATTTCTATTGGGGAACCTGGCCTCTGGGGAGCCCTGTCCTGGATCTaGGTCAGGCTCTTTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NHTYGSACISIGEPGLWGALSWI*VRLFAR Trigger: CCTGGCAAAGAGCCTGACCCAGATCCAGGACAGGGC...TCCCCAGAGGCCAGGTTCCCCAATAGAAATACAGGCTGAGCCATATGTGTGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR CCA 90 bp | CACATCCAGGGTCCAGGACATGGGCAAGAGTGGCTAGTTCCCAAGGCACAAGCTAAAAGACAGGAACGATaGCAATCACTGCATACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HIQGPGHGQEWLVPKAQAKRQER*QSLHTG Trigger: CCCAGTATGCAGTGATTGCCATCGTTCCTGTCTTTT...AGCTTGTGCCTTGGGAACTAGCCACTCTTGCCCATGTCCTGGACCCTGGATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR GCA 90 bp | ATAGCGGTTCTCCTCAGCTTTGTTCTCTGCTGGGGGCTTCAACCACTTAGTATGAAGTTCTGCATAATGTaGCCTGTCCTGGATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IAVLLSFVLCWGLQPLSMKFCIM*PVLDLG Trigger: ACCCAGATCCAGGACAGGGCACATTATGCAGAACTT...CATACTAAGTGGTTGAAGCCCCCAGCAGAGAACAAAGCTGAGGAGAACCGCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| CDS-3UTR GCA 90 bp | AGCAAAAACAGGCCAGATAAAGCTACTAATGGGAGGGTAGCAAAGTCAAGCTCCGCCTCTTTTGAAGGCTaGATCGGTAATGAGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKNRPDKATNGRVAKSSSASFEG*IGNEAG Trigger: GCCAGCCTCATTACCGATGCAGCCTTCAAAAGAGGC...GGAGCTTGACTTTGCTACCCTCCCATTAGTAGCTTTATCTGGCCTGTTTTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| CDS-3UTR CCA 90 bp | ACTCCTCCACCAAACCAGACCTCTAAGGGACAGAGGGCTCCTATGATGTGTTCACAGATAACAATGAACTaGTCCGCTGCTCAGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: TPPPNQTSKGQRAPMMCSQITMN*SAAQEY Trigger: GTATTCCTGAGCAGCGGACCAGTTCATTGTTATCTG...TGAACACATCATAGGAGCCCTCTGTCCCTTAGAGGTCTGGTTTGGTGGAGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS GCA 90 bp | GACCGCCTGCCCGAGTGCCATTCCCGGGCTGCCGAGGTTCACCGTTaGTACTGGTACCTGCTGCCACTTCGACGCCACGCCGGCCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: DRLPECHSRAAEVHR*YWYLLPLRRHAGPA Trigger: GGCGGGGCCGGCGTGGCGTCGAAGTGGCAGCAGGTACCAGTAGCAACGGTGAACCTCGGCAGCCCGGGAATGGCACTCGGGCAGGCGGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS CCA 90 bp | CTGCCCGAGTGCCATTCCCGGGCTGCCGAGGTTCACCGTTGCTACTaGTACCTGCTGCCACTTCGACGCCACGCCGGCCCCGCCGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPECHSRAAEVHRCY*YLLPLRRHAGPAAL Trigger: CAGGGCGGCGGGGCCGGCGTGGCGTCGAAGTGGCAGCAGGTACCAGTAGCAACGGTGAACCTCGGCAGCCCGGGAATGGCACTCGGGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS GCA 90 bp | GCAGCCGTCTCCTCAGGACCGCCTGCCCGAGTGCCATTCCCGGGCTaGCGAGGTTCACCGTTGCTACTGGTACCTGCTGCCACTTCGACG | + |
|
Preference number: 5 (lower is better) Translates to: AAVSSGPPARVPFPG*RGSPLLLVPAATST Trigger: CGTCGAAGTGGCAGCAGGTACCAGTAGCAACGGTGAACCTCGGCAGCCCGGGAATGGCACTCGGGCAGGCGGTCCTGAGGAGACGGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS GCA 90 bp | TCACTGCATACTGGGCAGCCGTCTCCTCAGGACCGCCTGCCCGAGTaGCATTCCCGGGCTGCCGAGGTTCACCGTTGCTACTGGTACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLHTGQPSPQDRLPE*HSRAAEVHRCYWYL Trigger: CAGGTACCAGTAGCAACGGTGAACCTCGGCAGCCCGGGAATGGCACTCGGGCAGGCGGTCCTGAGGAGACGGCTGCCCAGTATGCAGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS GCA 90 bp | GATGGCAATCACTGCATACTGGGCAGCCGTCTCCTCAGGACCGCCTaGCCGAGTGCCATTCCCGGGCTGCCGAGGTTCACCGTTGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: DGNHCILGSRLLRTA*PSAIPGLPRFTVAT Trigger: AGTAGCAACGGTGAACCTCGGCAGCCCGGGAATGGCACTCGGGCAGGCGGTCCTGAGGAGACGGCTGCCCAGTATGCAGTGATTGCCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR CAA 90 bp | GCCTCCTCAGTGGGGCGGACGGTCCCACCTCCAGGACTTGGCCTTTGCATCTTGTCTGGGTCAGGCTCTTaGCCAGGTGGACACAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ASSVGRTVPPPGLGLCILSGSGS*PGGHSQ Trigger: TTGGCTGTGTCCACCTGGCAAAGAGCCTGACCCAGA...CAAGATGCAAAGGCCAAGTCCTGGAGGTGGGACCGTCCGCCCCACTGAGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008462.11 ENSMUST00000155413.9 |
||
| CDS-3UTR CAA 90 bp | CGTCCTGGCTTGGCACTAGCCTTGGGAGCCCTGGATGCAGTAGGCAGAAGGGTGTCTGGGTCAGGCTCTTaGCCAGGTGGACACAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RPGLALALGALDAVGRRVSGSGS*PGGHSQ Trigger: TTGGCTGTGTCCACCTGGCAAAGAGCCTGACCCAGA...CACCCTTCTGCCTACTGCATCCAGGGCTCCCAAGGCTAGTGCCAAGCCAGGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
||
| CDS CCA 90 bp | CCCGCCGCCCTGACTCATCACAGCCACCAGTACTTGGAGGTGCCTTaGAACATGGCTGACACGGAACATGAGGAACTCCCTGTGGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PAALTHHSHQYLEVP*NMADTEHEELPVAQ Trigger: TTGGGCCACAGGGAGTTCCTCATGTTCCGTGTCAGCCATGTTCCAAGGCACCTCCAAGTACTGGTGGCTGTGATGAGTCAGGGCGGCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS CCA 90 bp | GATGCGGGCAGATGTGGGGTATGCTGGGTGAGGCCGGCAGCAGCCTaGGTACAGGCCTGTGACTTGTCTGTACCAGCTGTTTGCTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: DAGRCGVCWVRPAAA*VQACDLSVPAVCCD Trigger: ATCACAGCAAACAGCTGGTACAGACAAGTCACAGGCCTGTACCCAGGCTGCTGCCGGCCTCACCCAGCATACCCCACATCTGCCCGCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
||
| CDS-3UTR CAA 90 bp | GGTCCAGGACATGGGCAAGAGTGGCTAGTTCCCAAGGCACAAGCTTGGGGCCAGCACAGCCACCAGTACTaGGAGGTGCCTTGGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: GPGHGQEWLVPKAQAWGQHSHQY*EVPWNM Trigger: CATGTTCCAAGGCACCTCCAAGTACTGGTGGCTGTG...CTGGCCCCAAGCTTGTGCCTTGGGAACTAGCCACTCTTGCCCATGTCCTGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS-3UTR CAA 90 bp | TGGGCAAGAGTGGCTAGTTCCCAAGGCACAAGCTTGGGGCCAGGTACAGATACCGGGCCCAACTTCCTTTaGGGCTGTGCAATGGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: WARVASSQGTSLGPGTDTGPNFL*GCAMVA Trigger: GGCTACCATTGCACAGCCCAAAAGGAAGTTGGGCCC...GGTATCTGTACCTGGCCCCAAGCTTGTGCCTTGGGAACTAGCCACTCTTGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS GCA 90 bp | CATGAGTTGCTGTGCCAGCCTGGGCCTCCAGCCTCTTTTGAAGGCTaGATCGGTAATGAGGCTGGCATGGATAGGAGTTCCATGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: HELLCQPGPPASFEG*IGNEAGMDRSSMRL Trigger: CAGCCTCATGGAACTCCTATCCATGCCAGCCTCATTACCGATGCAGCCTTCAAAAGAGGCTGGAGGCCCAGGCTGGCACAGCAACTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000008462.11 ENSMUST00000136231.2 ENSMUST00000139604.8 ENSMUST00000155413.9 ENSMUST00000156855.8 |
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| CDS-3UTR CAA 90 bp | AGGCATCACCATAATAGACAGTCCCATGGGAGCCATGAAGGCCAAGGCCCAGGACGGTTCTCCTCAGCTTaGTTCTCTGCTGGGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: RHHHNRQSHGSHEGQGPGRFSSA*FSAGGF Trigger: GAAGCCCCCAGCAGAGAACAAAGCTGAGGAGAACCG...TCCTGGGCCTTGGCCTTCATGGCTCCCATGGGACTGTCTATTATGGTGATGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS-3UTR CAA 90 bp | GAAGGCCAAGGCCCAGGAAGCAGCAAAAACAGGCCAGATAAAGCTACTAATGGGTGCCGAGGTTCACCGTaGCTACTGGTACCTGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: EGQGPGSSKNRPDKATNGCRGSP*LLVPAA Trigger: GGCAGCAGGTACCAGTAGCAACGGTGAACCTCGGCA...CCCATTAGTAGCTTTATCTGGCCTGTTTTTGCTGCTTCCTGGGCCTTGGCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS-3UTR CAA 90 bp | TGGGCAAGAGTGGCTAGTTCCCAAGGCACAAGCTTGGGGCCAGGTACAGATACCGTACAGGCCTGTGACTaGTCTGTACCAGCTGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: WARVASSQGTSLGPGTDTVQACD*SVPAVC Trigger: GCAAACAGCTGGTACAGACAAGTCACAGGCCTGTAC...GGTATCTGTACCTGGCCCCAAGCTTGTGCCTTGGGAACTAGCCACTCTTGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS GCA 90 bp | GCAGCAGCCTGGGTACAGGCCTGTGACTTGTCTGTACCAGCTGTTTaGTGTGATATTCTTTCAACAGCTCCTCCAGGGCCGCTGCATTCT | + |
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Preference number: 5 (lower is better) Translates to: AAAWVQACDLSVPAV*CDILSTAPPGPLHS Trigger: AGAATGCAGCGGCCCTGGAGGAGCTGTTGAAAGAATATCACAGCAAACAGCTGGTACAGACAAGTCACAGGCCTGTACCCAGGCTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS CCA 90 bp | AGGTGCCTTGGAACATGGCTGACACGGAACATGAGGAACTCCCTGTaGCCCAAACCACCCATGCTGGCAGTCTCCACACATTGTATCATG | + |
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Preference number: 5 (lower is better) Translates to: RCLGTWLTRNMRNSL*PKPPMLAVSTHCIM Trigger: CATGATACAATGTGTGGAGACTGCCAGCATGGGTGGTTTGGGCCACAGGGAGTTCCTCATGTTCCGTGTCAGCCATGTTCCAAGGCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008462.11 ENSMUST00000139604.8 ENSMUST00000156855.8 |
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| CDS-3UTR CAA 90 bp | ACTCCTCCACCAAACCAGACCTCTAAGGGACAGAGGGCTCCTATGATGTGTTCATTCCGCTTGAGCAGGTaGCACACCAGGATGCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: TPPPNQTSKGQRAPMMCSFRLSR*HTRMPR Trigger: TCTGGGCATCCTGGTGTGCAACCTGCTCAAGCGGAA...TGAACACATCATAGGAGCCCTCTGTCCCTTAGAGGTCTGGTTTGGTGGAGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS GCA 90 bp | AAGTTCTGCATAATGTGCCCTGTCCTGGATCTGGGTCAGGCTCTTTaGCAGGTGGACACAGCCAAGGAGTTATTGGTGTTGGAGTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: KFCIMCPVLDLGQAL*QVDTAKELLVLEWP Trigger: TGGCCACTCCAACACCAATAACTCCTTGGCTGTGTCCACCTGGCAAAGAGCCTGACCCAGATCCAGGACAGGGCACATTATGCAGAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000008462.11 ENSMUST00000136231.2 ENSMUST00000139604.8 ENSMUST00000155413.9 ENSMUST00000156855.8 |
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| CDS-3UTR CAA 90 bp | AATCACACATATGGCTCAGCCTGTATTTCTATTGGGGAACCTGGCCTCTGGGGAAAGGAGTTATTGGTGTaGGAGTGGCCAGAGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: NHTYGSACISIGEPGLWGKELLV*EWPEAR Trigger: CCTGGCCTCTGGCCACTCCAACACCAATAACTCCTT...TCCCCAGAGGCCAGGTTCCCCAATAGAAATACAGGCTGAGCCATATGTGTGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS-3UTR CAA 90 bp | ATAGCGGTTCTCCTCAGCTTTGTTCTCTGCTGGGGGCTTCAACCACTTAGTATGAAGGAGTTATTGGTGTaGGAGTGGCCAGAGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: IAVLLSFVLCWGLQPLSMKELLV*EWPEAR Trigger: CCTGGCCTCTGGCCACTCCAACACCAATAACTCCTT...CATACTAAGTGGTTGAAGCCCCCAGCAGAGAACAAAGCTGAGGAGAACCGCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| CDS-3UTR CAA 90 bp | AGCAAAAACAGGCCAGATAAAGCTACTAATGGGAGGGTAGCAAAGTCAAGCTCCGGCTTGGCACTAGCCTaGGGAGCCCTGGATGCAGTA | + |
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Preference number: 5 (lower is better) Translates to: SKNRPDKATNGRVAKSSSGLALA*GALDAV Trigger: TACTGCATCCAGGGCTCCCAAGGCTAGTGCCAAGCC...GGAGCTTGACTTTGCTACCCTCCCATTAGTAGCTTTATCTGGCCTGTTTTTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS CAA 90 bp | GGACCGCCTGCCCGAGTGCCATTCCCGGGCTGCCGAGGTTCACCGTaGCTACTGGTACCTGCTGCCACTTCGACGCCACGCCGGCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: GPPARVPFPGCRGSP*LLVPAATSTPRRPR Trigger: GCGGGGCCGGCGTGGCGTCGAAGTGGCAGCAGGTACCAGTAGCAACGGTGAACCTCGGCAGCCCGGGAATGGCACTCGGGCAGGCGGTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS GCA 72 bp | ACTGGGCAGCCGTCTCCTCAGGACCGCCTGCCCGAGTaGCATTCCCGGGCTGCCGAGGTTCACCGTTGCTAC | + |
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Preference number: 6 (lower is better) Translates to: TGQPSPQDRLPE*HSRAAEVHRCY Trigger: GTAGCAACGGTGAACCTCGGCAGCCCGGGAATGGCACTCGGGCAGGCGGTCCTGAGGAGACGGCTGCCCAGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS CCA 72 bp | TGCCATTCCCGGGCTGCCGAGGTTCACCGTTGCTACTaGTACCTGCTGCCACTTCGACGCCACGCCGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: CHSRAAEVHRCY*YLLPLRRHAGP Trigger: GGGGCCGGCGTGGCGTCGAAGTGGCAGCAGGTACCAGTAGCAACGGTGAACCTCGGCAGCCCGGGAATGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS GCA 72 bp | CCCGAGTGCCATTCCCGGGCTGCCGAGGTTCACCGTTaGTACTGGTACCTGCTGCCACTTCGACGCCACGCC | + |
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Preference number: 6 (lower is better) Translates to: PECHSRAAEVHR*YWYLLPLRRHA Trigger: GGCGTGGCGTCGAAGTGGCAGCAGGTACCAGTAGCAACGGTGAACCTCGGCAGCCCGGGAATGGCACTCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS TCA 72 bp | GTGGTGGTGATGCGGGCAGATGTGGGGTATGCTGGGTaGGGCCGGCAGCAGCCTGGGTACAGGCCTGTGACT | + |
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Preference number: 6 (lower is better) Translates to: VVVMRADVGYAG*GRQQPGYRPVT Trigger: AGTCACAGGCCTGTACCCAGGCTGCTGCCGGCCTCACCCAGCATACCCCACATCTGCCCGCATCACCACCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS CAA 90 bp | CGCCACGCCGGCCCCGCCGCCCTGACTCATCACAGCCACCAGTACTaGGAGGTGCCTTGGAACATGGCTGACACGGAACATGAGGAACTC | + |
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Preference number: 6 (lower is better) Translates to: RHAGPAALTHHSHQY*EVPWNMADTEHEEL Trigger: GAGTTCCTCATGTTCCGTGTCAGCCATGTTCCAAGGCACCTCCAAGTACTGGTGGCTGTGATGAGTCAGGGCGGCGGGGCCGGCGTGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS CAA 72 bp | GGCCCCGCCGCCCTGACTCATCACAGCCACCAGTACTaGGAGGTGCCTTGGAACATGGCTGACACGGAACAT | + |
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Preference number: 6 (lower is better) Translates to: GPAALTHHSHQY*EVPWNMADTEH Trigger: ATGTTCCGTGTCAGCCATGTTCCAAGGCACCTCCAAGTACTGGTGGCTGTGATGAGTCAGGGCGGCGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS CCA 72 bp | AGATGTGGGGTATGCTGGGTGAGGCCGGCAGCAGCCTaGGTACAGGCCTGTGACTTGTCTGTACCAGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: RCGVCWVRPAAA*VQACDLSVPAV Trigger: AACAGCTGGTACAGACAAGTCACAGGCCTGTACCCAGGCTGCTGCCGGCCTCACCCAGCATACCCCACATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS GCA 72 bp | CTGTGCCAGCCTGGGCCTCCAGCCTCTTTTGAAGGCTaGATCGGTAATGAGGCTGGCATGGATAGGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: LCQPGPPASFEG*IGNEAGMDRSS Trigger: GGAACTCCTATCCATGCCAGCCTCATTACCGATGCAGCCTTCAAAAGAGGCTGGAGGCCCAGGCTGGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000008462.11 ENSMUST00000136231.2 ENSMUST00000139604.8 ENSMUST00000155413.9 ENSMUST00000156855.8 |
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| CDS CCA 72 bp | GCCCTGTCCTGGATCTGGGTCAGGCTCTTTGCCAGGTaGACACAGCCAAGGAGTTATTGGTGTTGGAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: ALSWIWVRLFAR*TQPRSYWCWSG Trigger: GCCACTCCAACACCAATAACTCCTTGGCTGTGTCCACCTGGCAAAGAGCCTGACCCAGATCCAGGACAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000008462.11 ENSMUST00000136231.2 ENSMUST00000139604.8 ENSMUST00000155413.9 ENSMUST00000156855.8 |
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| CDS CAA 72 bp | GTGGCCCAAACCACCCATGCTGGCAGTCTCCACACATaGTATCATGAGTTGCTGTGCCAGCCTGGGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VAQTTHAGSLHT*YHELLCQPGPP Trigger: TGGAGGCCCAGGCTGGCACAGCAACTCATGATACAATGTGTGGAGACTGCCAGCATGGGTGGTTTGGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000008462.11 ENSMUST00000136231.2 ENSMUST00000139604.8 ENSMUST00000156855.8 |
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| CDS CAA 90 bp | GAACTCCCTGTGGCCCAAACCACCCATGCTGGCAGTCTCCACACATaGTATCATGAGTTGCTGTGCCAGCCTGGGCCTCCAGCCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: ELPVAQTTHAGSLHT*YHELLCQPGPPASF Trigger: AAAAGAGGCTGGAGGCCCAGGCTGGCACAGCAACTCATGATACAATGTGTGGAGACTGCCAGCATGGGTGGTTTGGGCCACAGGGAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000008462.11 ENSMUST00000136231.2 ENSMUST00000139604.8 ENSMUST00000156855.8 |
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| CDS CCA 72 bp | GGAACATGGCTGACACGGAACATGAGGAACTCCCTGTaGCCCAAACCACCCATGCTGGCAGTCTCCACACAT | + |
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Preference number: 6 (lower is better) Translates to: GTWLTRNMRNSL*PKPPMLAVSTH Trigger: ATGTGTGGAGACTGCCAGCATGGGTGGTTTGGGCCACAGGGAGTTCCTCATGTTCCGTGTCAGCCATGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000008462.11 ENSMUST00000136231.2 ENSMUST00000139604.8 ENSMUST00000156855.8 |
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| CDS TCA 72 bp | AACCACCCATGCTGGCAGTCTCCACACATTGTATCATaGGTTGCTGTGCCAGCCTGGGCCTCCAGCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: NHPCWQSPHIVS*VAVPAWASSLF Trigger: AAAGAGGCTGGAGGCCCAGGCTGGCACAGCAACTCATGATACAATGTGTGGAGACTGCCAGCATGGGTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000008462.11 ENSMUST00000136231.2 ENSMUST00000139604.8 ENSMUST00000156855.8 |
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| CDS TCA 72 bp | CTGACTCCATGCTGGCAGTCTCCACACATTGTATCATaGGTTGCTGTGCCAGCCTGGGCCTCCAGCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LTPCWQSPHIVS*VAVPAWASSLF Trigger: AAAGAGGCTGGAGGCCCAGGCTGGCACAGCAACTCATGATACAATGTGTGGAGACTGCCAGCATGGAGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155413.9 |
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| CDS CAA 90 bp | CAAGTTCTGCATAATGTGCCCTGTCCTGGATCTGGGTCAGGCTCTTaGCCAGGTGGACACAGCCAAGGAGTTATTGGTGTTGGAGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: QVLHNVPCPGSGSGS*PGGHSQGVIGVGVA Trigger: GGCCACTCCAACACCAATAACTCCTTGGCTGTGTCCACCTGGCAAAGAGCCTGACCCAGATCCAGGACAGGGCACATTATGCAGAACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000008462.11 ENSMUST00000136231.2 ENSMUST00000139604.8 ENSMUST00000155413.9 ENSMUST00000156855.8 |
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| CDS CAA 90 bp | GTATGCTGGGTGAGGCCGGCAGCAGCCTGGGTACAGGCCTGTGACTaGTCTGTACCAGCTGTTTGCTGTGATATTCTTTCAACAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VCWVRPAAAWVQACD*SVPAVCCDILSTAP Trigger: AGGAGCTGTTGAAAGAATATCACAGCAAACAGCTGGTACAGACAAGTCACAGGCCTGTACCCAGGCTGCTGCCGGCCTCACCCAGCATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS CCA 72 bp | CTGACTCATCACAGCCACCAGTACTTGGAGGTGCCTTaGAACATGGCTGACACGGAACATGAGGAACTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LTHHSHQYLEVP*NMADTEHEELP Trigger: AGGGAGTTCCTCATGTTCCGTGTCAGCCATGTTCCAAGGCACCTCCAAGTACTGGTGGCTGTGATGAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS CAA 90 bp | CATTGTATCATGAGTTGCTGTGCCAGCCTGGGCCTCCAGCCTCTTTaGAAGGCTGCATCGGTAATGAGGCTGGCATGGATAGGAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: HCIMSCCASLGLQPL*KAASVMRLAWIGVP Trigger: TGGAACTCCTATCCATGCCAGCCTCATTACCGATGCAGCCTTCAAAAGAGGCTGGAGGCCCAGGCTGGCACAGCAACTCATGATACAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000008462.11 ENSMUST00000136231.2 ENSMUST00000139604.8 ENSMUST00000155413.9 ENSMUST00000156855.8 |
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| CDS GCA 72 bp | ATAATGTGCCCTGTCCTGGATCTGGGTCAGGCTCTTTaGCAGGTGGACACAGCCAAGGAGTTATTGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: IMCPVLDLGQAL*QVDTAKELLVL Trigger: CAACACCAATAACTCCTTGGCTGTGTCCACCTGGCAAAGAGCCTGACCCAGATCCAGGACAGGGCACATTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000008462.11 ENSMUST00000136231.2 ENSMUST00000139604.8 ENSMUST00000155413.9 ENSMUST00000156855.8 |
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| CDS GCA 72 bp | TGGGTACAGGCCTGTGACTTGTCTGTACCAGCTGTTTaGTGTGATATTCTTTCAACAGCTCCTCCAGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: WVQACDLSVPAV*CDILSTAPPGP Trigger: CGGCCCTGGAGGAGCTGTTGAAAGAATATCACAGCAAACAGCTGGTACAGACAAGTCACAGGCCTGTACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008462.11 |
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| CDS CAA 72 bp | CATAATGTGCCCTGTCCTGGATCTGGGTCAGGCTCTTaGCCAGGTGGACACAGCCAAGGAGTTATTGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: HNVPCPGSGSGS*PGGHSQGVIGV Trigger: AACACCAATAACTCCTTGGCTGTGTCCACCTGGCAAAGAGCCTGACCCAGATCCAGGACAGGGCACATTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000008462.11 ENSMUST00000136231.2 ENSMUST00000139604.8 ENSMUST00000155413.9 ENSMUST00000156855.8 |
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