Pregenerated sensors for RELL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044024Ensembl transcript IDs: ENSMUST00000070709.9, ENSMUST00000091932.12, ENSMUST00000163128.9, ENSMUST00000163591.9, ENSMUST00000168056.9, ENSMUST00000169498.3, ENSMUST00000176104.8, ENSMUST00000176902.8, ENSMUST00000177058.8
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCAGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGCCTAAGGTaGTATTGCTTTAGGGGCCCACCGAGGGTAGGGCCTGGTCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: ARAWASCAKMAGGLR*YCFRGPPRVGPGPS Trigger: GCTGGGACCAGGCCCTACCCTCGGTGGGCCCCTAAAGCAATAGCACCTTAGGCCCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| 3UTR TCA 90 bp | TGTACAAGGGACGAGGCTGGCATCCTGGAGTCTTCCGTTCTGCACTaGGTGGGTGGCTGCGGCCTGGGAGGGTGGCGGCTCAGGGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: CTRDEAGILESSVLH*VGGCGLGGWRLREQ Trigger: CTGCTCCCTGAGCCGCCACCCTCCCAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCAGGATGCCAGCCTCGTCCCTTGTACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
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| 3UTR CCA 90 bp | CCCACCGAGGGTAGGGCCTGGTCCCAGCAGCCACGCTCTAGCATGTaGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: PTEGRAWSQQPRSSM*SEVLGKAGQATCWQ Trigger: CTGCCAACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCAGGCCCTACCCTCGGTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| 3UTR GCA 90 bp | TCAAGTGTACAAGGGACGAGGCTGGCATCCTGGAGTCTTCCGTTCTaGACTGAGTGGGTGGCTGCGGCCTGGGAGGGTGGCGGCTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: SSVQGTRLASWSLPF*TEWVAAAWEGGGSG Trigger: CCCTGAGCCGCCACCCTCCCAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCAGGATGCCAGCCTCGTCCCTTGTACACTTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
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| 3UTR CCA 90 bp | GGGCCTGGTCCCAGCAGCCACGCTCTAGCATGTGGAGCGAGGTTTTaGGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTGGGGAAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: GPGPSSHALACGARF*GRQARQPVGRWGKG Trigger: TCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCAGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| 3UTR CCA 90 bp | GAGGGCAGGAGGGTGAGATTACCTGATCTGGAGCTCAGGGAGACTTaGCTCACATACCCCCTGCTTCTGGTGGTAGAGACTCCTGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: EGRRVRLPDLELRET*LTYPLLLVVETPER Trigger: CCTCTCAGGAGTCTCTACCACCAGAAGCAGGGGGTATGTGAGCCAAGTCTCCCTGAGCTCCAGATCAGGTAATCTCACCCTCCTGCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
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| 3UTR TCA 90 bp | GGAGACTTGGCTCACATACCCCCTGCTTCTGGTGGTAGAGACTCCTaGGAGGAGGGGGAAGGATTCAGTGGGAACAGGAAGTGGATCATA | + |
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Preference number: 1 (lower is better) Translates to: GDLAHIPPASGGRDS*EEGEGFSGNRKWII Trigger: TATGATCCACTTCCTGTTCCCACTGAATCCTTCCCCCTCCTCTCAGGAGTCTCTACCACCAGAAGCAGGGGGTATGTGAGCCAAGTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
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| 3UTR TCA 90 bp | GCTATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTaGAGACTGAGGCTTGGAAGAAAGGAAGGGAAGCAGTGTTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: AIRPLAMPAGNPSAQ*RLRLGRKEGKQCCC Trigger: GCAACAACACTGCTTCCCTTCCTTTCTTCCAAGCCTCAGTCTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
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| 3UTR CCA 90 bp | GTCCAGTTTGGTTGGCTGTCCATTTGCTTCTTGACTAGACAGCCCTaGGCTTGGGTCTCTCCCTCTAGGGCCCAAGTTCAGTTCTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: VQFGWLSICFLTRQP*AWVSPSRAQVQFCR Trigger: TCTGCAGAACTGAACTTGGGCCCTAGAGGGAGAGACCCAAGCCCAGGGCTGTCTAGTCAAGAAGCAAATGGACAGCCAACCAAACTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
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| 3UTR TCA 90 bp | ATGGGCTTGAGTAGTTTAGATAGAGGGCAGGAGGGTGAGATTACCTaGTCTGGAGCTCAGGGAGACTTGGCTCACATACCCCCTGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: MGLSSLDRGQEGEIT*SGAQGDLAHIPPAS Trigger: AGAAGCAGGGGGTATGTGAGCCAAGTCTCCCTGAGCTCCAGATCAGGTAATCTCACCCTCCTGCCCTCTATCTAAACTACTCAAGCCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
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| 3UTR-3UTR CCA 90 bp | CTGGCATCCTGGAGTCTTCCGTTCTGCACTGAGTGGGTGGCTGCGGCCTGGGAGCGCCTGACTACCCCCTaGCTCCTGCCCTCCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: LASWSLPFCTEWVAAAWERLTTP*LLPSTR Trigger: TCTGGTGGAGGGCAGGAGCCAGGGGGTAGTCAGGCG...CTCCCAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCAGGATGCCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTGCAGAGGTTCCAGGGGTCCCCTCAAGTGTACAAGGGACGAGGCTGGCACCTCCTCCAGCCGCCTaGCTACCCCCTGGCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SSAEVPGVPSSVQGTRLAPPPAA*LPPGSC Trigger: GCAGGAGCCAGGGGGTAGTCAGGCGGCTGGAGGAGG...TGCCAGCCTCGTCCCTTGTACACTTGAGGGGACCCCTGGAACCTCTGCAGAACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCCCTCTAGGGCCCAAGTTCAGTTCTGCAGAGGTTCCAGGGGTCCCCTCACCTCCTCCAGCCGCCTaGCTACCCCCTGGCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SLPLGPKFSSAEVPGVPSPPPAA*LPPGSC Trigger: GCAGGAGCCAGGGGGTAGTCAGGCGGCTGGAGGAGG...TGAGGGGACCCCTGGAACCTCTGCAGAACTGAACTTGGGCCCTAGAGGGAGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
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| 3UTR-3UTR GCA 90 bp | TGGTCCCAGCAGCCACGCTCTAGCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCATGTGTGTCCGCCACTaGCCAGTGCAGCCCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: WSQQPRSSMWSEVLGKAGMCVRH*PVQPWA Trigger: TGCCCAGGGCTGCACTGGGCAGTGGCGGACACACAT...GCCTGCCTTCCCCAAAACCTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
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| 3UTR-3UTR GCA 90 bp | CCCTCTAGGGCCCAAGTTCAGTTCTGCAGAGGTTCCAGGGGTCCCCTCAAGTGTCTACCCCCTGGCTCCTaGCCTCCACCAGAGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PSRAQVQFCRGSRGPLKCLPPGS*PPPEPQ Trigger: CTGGGGCTCTGGTGGAGGGCAGGAGCCAGGGGGTAG...ACACTTGAGGGGACCCCTGGAACCTCTGCAGAACTGAACTTGGGCCCTAGAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
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| 3UTR-3UTR CCA 90 bp | GGCCTAAGGTGCTATTGCTTTAGGGGCCCACCGAGGGTAGGGCCTGGTCCCAGCGGCCAGGCAACCTGTTaGCAGGTGGGGAAAGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: GLRCYCFRGPPRVGPGPSGQATC*QVGKGN Trigger: GTTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCC...GCTGGGACCAGGCCCTACCCTCGGTGGGCCCCTAAAGCAATAGCACCTTAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCCAGGCAACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGGGCTGGGAGGCAGAGCTGTCCAGTaGAGGGGAGAGCCTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RPGNLLAGGEREQNEGLGGRAVQ*RGEPSW Trigger: CCAGGAAGGCTCTCCCCTCCACTGGACAGCTCTGCC...TCCCAGCCCCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGCCTAAGGTGCTATTGCTTTACCGAGGGTAGGGCCTaGTCCCAGCAGCCACGCTCT | + |
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Preference number: 2 (lower is better) Translates to: RAWASCAKMAGGLRCYCFTEGRA*SQQPRS Trigger: AGAGCGTGGCTGCTGGGACCAGGCCCTACCCTCGGT...AAAGCAATAGCACCTTAGGCCCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTAGGGCCCAAGTTCAGTTCTGCAGAGGTTCCAGGGGTCCCCTCAAGTGTTCTGCACTGAGTGGGTaGCTGCGGCCTGGGAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PSRAQVQFCRGSRGPLKCSALSG*LRPGRV Trigger: CACCCTCCCAGGCCGCAGCCACCCACTCAGTGCAGA...ACACTTGAGGGGACCCCTGGAACCTCTGCAGAACTGAACTTGGGCCCTAGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTAGGGCCCAAGTTCAGTTCTGCAGAGGTTCCAGGGGTCCCCTCAAGTGTCCGTTCTGCACTGAGTaGGTGGCTGCGGCCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PSRAQVQFCRGSRGPLKCPFCTE*VAAAWE Trigger: CTCCCAGGCCGCAGCCACCCACTCAGTGCAGAACGG...ACACTTGAGGGGACCCCTGGAACCTCTGCAGAACTGAACTTGGGCCCTAGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCCCTCTAGGGCCCAAGTTCAGTTCTGCAGAGGTTCCAGGGGTCCCCTCATCTTCCGTTCTGCACTaGGTGGGTGGCTGCGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SLPLGPKFSSAEVPGVPSSSVLH*VGGCGL Trigger: CAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGA...TGAGGGGACCCCTGGAACCTCTGCAGAACTGAACTTGGGCCCTAGAGGGAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTGCAGAGGTTCCAGGGGTCCCCTCAAGTGTACAAGGGACGAGGCTGGCATCTTCCGTTCTGCACTaGGTGGGTGGCTGCGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SSAEVPGVPSSVQGTRLASSVLH*VGGCGL Trigger: CAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGA...TGCCAGCCTCGTCCCTTGTACACTTGAGGGGACCCCTGGAACCTCTGCAGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTGGGAATTGGGAGGGGCTCCTCCTGAGGGCTCTCAGCCGGGGACCATGTATAGACTGAGGCTGATCTaGAGCTCAGGGAGACTTGGC | + |
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Preference number: 2 (lower is better) Translates to: GWELGGAPPEGSQPGTMYRLRLI*SSGRLG Trigger: GCCAAGTCTCCCTGAGCTCCAGATCAGCCTCAGTCT...ATACATGGTCCCCGGCTGAGAGCCCTCAGGAGGAGCCCCTCCCAATTCCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070709.9 ENSMUST00000177058.8 |
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| 3UTR-3UTR CCA 90 bp | CACGCTCTAGCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTGGCAGAGCTGTCCAGTaGAGGGGAGAGCCTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: HALACGARFWGRQARQPVGRAVQ*RGEPSW Trigger: CCAGGAAGGCTCTCCCCTCCACTGGACAGCTCTGCC...AACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGCTAGAGCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| 3UTR-3UTR CCA 90 bp | GCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTGGTGTGGAGCGAGGTTTTaGGGAAGGCAGGCCAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: ACGARFWGRQARQPVGRWCGARF*GRQARQ Trigger: TTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACA...CCACCTGCCAACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGAGGGGAGAGCCTTCCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTAACTGTGGAGCGAGGTTTTaGGGAAGGCAGGCCAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: VEGRAFLAIRPLAMPAGNCGARF*GRQARQ Trigger: TTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACA...GTTACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGAAGGCTCTCCCCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTAGGGCCCAAGTTCAGTTCTGCAGAGGTTCCAGGGGTCCCCTCAAGTGTATCTGCACTGAGTGGGTaGCTGCGGCCTGGGAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PLGPKFSSAEVPGVPSSVSALSG*LRPGRV Trigger: CACCCTCCCAGGCCGCAGCCACCCACTCAGTGCAGA...TACACTTGAGGGGACCCCTGGAACCTCTGCAGAACTGAACTTGGGCCCTAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTCCCAGCAGCCACGCTCTAGCATGTGGAGCGAGGTTTTGGGGAAGGCAGAACCCATCAGCACAGTaGAGACTGAGGCTGATCTGG | + |
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Preference number: 2 (lower is better) Translates to: PGPSSHALACGARFWGRQNPSAQ*RLRLIW Trigger: CCAGATCAGCCTCAGTCTTCACTGTGCTGATGGGTT...CTGCCTTCCCCAAAACCTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070709.9 ENSMUST00000177058.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGGTATGAAGTCCAAGCCAGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGGAAAGGGAACAGAATaGGGGGCTGGGAATTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: KGMKSKPGPGPLVPRWQGGKGTE*GAGNWE Trigger: CTCCCAATTCCCAGCCCCTCATTCTGTTCCCTTTCC...CCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCTGGCTTGGACTTCATACCCTT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTACCGAGGGTAGGGCCTaGTCCCAGCAGCCACGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LSAGDHVSPDGSRVGPSTTEGRA*SQQPRS Trigger: AGAGCGTGGCTGCTGGGACCAGGCCCTACCCTCGGT...AGTTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| 3UTR-3UTR GCA 90 bp | CTCACATACCCCCTGCTTCTGGTGGTAGAGACTCCTGCTGACCTGAGGTGTCCATGGAGTCTTCCGTTCTaGACTGAGTGGGTGGCTGCG | + |
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Preference number: 2 (lower is better) Translates to: LTYPLLLVVETPADLRCPWSLPF*TEWVAA Trigger: CGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCA...TGGACACCTCAGGTCAGCAGGAGTCTCTACCACCAGAAGCAGGGGGTATGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCTCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTAGACTGAGGCTGATCTaGAGCTCAGGGAGACTTGGC | + |
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Preference number: 2 (lower is better) Translates to: EGSQPGTMYLQMEVELVPRLRLI*SSGRLG Trigger: GCCAAGTCTCCCTGAGCTCCAGATCAGCCTCAGTCT...AGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGAGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070709.9 ENSMUST00000177058.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTGGCTCACATACCCCCTGCTTCTGGTGGTAGAGACTCCTGAGAGGAGGGGGAGTGGGAACAGGAAGTaGATCATACCCACGTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: TWLTYPLLLVVETPERRGSGNRK*IIPTLP Trigger: GGGCAACGTGGGTATGATCCACTTCCTGTTCCCACT...CCCCCTCCTCTCAGGAGTCTCTACCACCAGAAGCAGGGGGTATGTGAGCCAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
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| 3UTR-3UTR GCA 90 bp | CTCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGCAGGGGGCCTAAGGTaGTATTGCTTTAGGGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LSAGDHVSPDGSRVGPSTAGGLR*YCFRGP Trigger: TGGGCCCCTAAAGCAATAGCACCTTAGGCCCCCTGC...AGTTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTTGTGCCAAGATGGCAGGGGGCCTAAGGTGCTATTGCTTTAGGGGCCCAGGGGGAAGGATTCAGTaGGAACAGGAAGTGGATCAT | + |
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Preference number: 2 (lower is better) Translates to: ASCAKMAGGLRCYCFRGPGGRIQ*EQEVDH Trigger: ATGATCCACTTCCTGTTCCCACTGAATCCTTCCCCC...TGGGCCCCTAAAGCAATAGCACCTTAGGCCCCCTGCCATCTTGGCACAAGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGCCTAAGGTGCTATTGCTTTAGGTTGTATTGTATCTCCTaGAGGAACCTGTGCCCGCTC | + |
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Preference number: 2 (lower is better) Translates to: AWASCAKMAGGLRCYCFRLYCIS*RNLCPL Trigger: GAGCGGGCACAGGTTCCTCCAGGAGATACAATACAA...CCTAAAGCAATAGCACCTTAGGCCCCCTGCCATCTTGGCACAAGAGGCCCAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
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| 3UTR-3UTR TCA 90 bp | CAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGAACCCATCAGCACAGTaGAGACTGAGGCTGATCTGG | + |
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Preference number: 2 (lower is better) Translates to: QPGTMYLQMEVELVPQLRNPSAQ*RLRLIW Trigger: CCAGATCAGCCTCAGTCTTCACTGTGCTGATGGGTT...CCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070709.9 ENSMUST00000177058.8 |
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| 3UTR-3UTR TCA 90 bp | GTCAAGCTCTGTTCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTGTGCCCGGTGGTAGAGACTCCTaGGAGGAGGGGGAAGGATTC | + |
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Preference number: 2 (lower is better) Translates to: VKLCSPGIVLYLLEEPVPGGRDS*EEGEGF Trigger: GAATCCTTCCCCCTCCTCTCAGGAGTCTCTACCACC...GGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGAACAGAGCTTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
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| 3UTR-3UTR TCA 90 bp | CAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGCAGCACAGTGAAGACTaGGGCTTGGAAGAAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: QPGTMYLQMEVELVPQLRQHSED*GLEERK Trigger: CTTCCTTTCTTCCAAGCCTCAGTCTTCACTGTGCTG...CCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
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| 3UTR CAA 90 bp | AAGCAGTGTTGTTGCCTAGTCAAGCTCTGTTCTCCAGGCATTGTATaGTATCTCCTGGAGGAACCTGTGCCCGCTCCCCACACACTAAGC | + |
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Preference number: 2 (lower is better) Translates to: KQCCCLVKLCSPGIV*YLLEEPVPAPHTLS Trigger: GCTTAGTGTGTGGGGAGCGGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGAACAGAGCTTGACTAGGCAACAACACTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
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| 3UTR CAA 90 bp | CCACACACTAAGCTTACAGTTCACCCACCTCCAGGATTCAGGGAGTaGATGGGCTTGAGTAGTTTAGATAGAGGGCAGGAGGGTGAGATT | + |
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Preference number: 2 (lower is better) Translates to: PHTKLTVHPPPGFRE*MGLSSLDRGQEGEI Trigger: AATCTCACCCTCCTGCCCTCTATCTAAACTACTCAAGCCCATCAACTCCCTGAATCCTGGAGGTGGGTGAACTGTAAGCTTAGTGTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
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| 3UTR CAA 90 bp | ACAGTGAAGACTGAGGCTTGGAAGAAAGGAAGGGAAGCAGTGTTGTaGCCTAGTCAAGCTCTGTTCTCCAGGCATTGTATTGTATCTCCT | + |
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Preference number: 2 (lower is better) Translates to: TVKTEAWKKGREAVL*PSQALFSRHCIVSP Trigger: AGGAGATACAATACAATGCCTGGAGAACAGAGCTTGACTAGGCAACAACACTGCTTCCCTTCCTTTCTTCCAAGCCTCAGTCTTCACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
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| 3UTR CAA 90 bp | AGCACAGTGAAGACTGAGGCTTGGAAGAAAGGAAGGGAAGCAGTGTaGTTGCCTAGTCAAGCTCTGTTCTCCAGGCATTGTATTGTATCT | + |
|
Preference number: 2 (lower is better) Translates to: STVKTEAWKKGREAV*LPSQALFSRHCIVS Trigger: AGATACAATACAATGCCTGGAGAACAGAGCTTGACTAGGCAACAACACTGCTTCCCTTCCTTTCTTCCAAGCCTCAGTCTTCACTGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
||
| 3UTR CCA 72 bp | AGGCTGGCATCCTGGAGTCTTCCGTTCTGCACTGAGTaGGTGGCTGCGGCCTGGGAGGGTGGCGGCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RLASWSLPFCTE*VAAAWEGGGSG Trigger: CCCTGAGCCGCCACCCTCCCAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCAGGATGCCAGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
||
| 3UTR GCA 72 bp | CAAGGGACGAGGCTGGCATCCTGGAGTCTTCCGTTCTaGACTGAGTGGGTGGCTGCGGCCTGGGAGGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QGTRLASWSLPF*TEWVAAAWEGG Trigger: GCCACCCTCCCAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCAGGATGCCAGCCTCGTCCCTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
||
| 3UTR CCA 72 bp | TGGCATCCTGGAGTCTTCCGTTCTGCACTGAGTGGGTaGCTGCGGCCTGGGAGGGTGGCGGCTCAGGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WHPGVFRSALSG*LRPGRVAAQGA Trigger: TGCTCCCTGAGCCGCCACCCTCCCAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCAGGATGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGGGAATTGGGAGGGGCTCCTCCTGAGGGCTCTCAGCCGGGGACCATGTATATGTGGAGCGAGGTTTaGGGGAAGGCAGGCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GWELGGAPPEGSQPGTMYMWSEV*GKAGQA Trigger: TGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACAT...ATACATGGTCCCCGGCTGAGAGCCCTCAGGAGGAGCCCCTCCCAATTCCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTGGGAGGCCAGGCAACCTGTaGGCAGGTGGGGAAAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HVERGFGEGRPGNLLAGGRPGNL*AGGERE Trigger: TTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCT...CCCACCTGCCAACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTGGGATGTGGAGCGAGGTTTaGGGGAAGGCAGGCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HVERGFGEGRPGNLLAGGMWSEV*GKAGQA Trigger: TGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACAT...CCCACCTGCCAACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| 3UTR GCA 72 bp | TCTTGTGCCAAGATGGCAGGGGGCCTAAGGTGCTATTaGTTTAGGGGCCCACCGAGGGTAGGGCCTGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SCAKMAGGLRCY*FRGPPRVGPGP Trigger: GGGACCAGGCCCTACCCTCGGTGGGCCCCTAAAGCAATAGCACCTTAGGCCCCCTGCCATCTTGGCACAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| 3UTR GCA 72 bp | TGGGCCTCTTGTGCCAAGATGGCAGGGGGCCTAAGGTaGTATTGCTTTAGGGGCCCACCGAGGGTAGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: WASCAKMAGGLR*YCFRGPPRVGP Trigger: AGGCCCTACCCTCGGTGGGCCCCTAAAGCAATAGCACCTTAGGCCCCCTGCCATCTTGGCACAAGAGGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTGAGGCCAGGCAACCTGTaGGCAGGTGGGGAAAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SMWSEVLGKAGQATCWQVRPGNL*AGGERE Trigger: TTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCT...CACCTGCCAACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| 3UTR CCA 72 bp | GTCCCCTCAAGTGTACAAGGGACGAGGCTGGCATCCTaGAGTCTTCCGTTCTGCACTGAGTGGGTGGCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: VPSSVQGTRLAS*SLPFCTEWVAA Trigger: CGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCAGGATGCCAGCCTCGTCCCTTGTACACTTGAGGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
||
| 3UTR CCA 72 bp | CAGTGGAGGGGAGAGCCTTCCTGGCTATCCGTCCCCTaGCAATGCCTGCTGGTAACCCATCAGCACAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QWRGEPSWLSVP*QCLLVTHQHSE Trigger: TTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGAAGGCTCTCCCCTCCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| 3UTR GCA 72 bp | GCTTGGGTCTCTCCCTCTAGGGCCCAAGTTCAGTTCTaGAGAGGTTCCAGGGGTCCCCTCAAGTGTACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: AWVSPSRAQVQF*RGSRGPLKCTR Trigger: CCTTGTACACTTGAGGGGACCCCTGGAACCTCTGCAGAACTGAACTTGGGCCCTAGAGGGAGAGACCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
||
| 3UTR-3UTR CAA 90 bp | GCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTGGAGGGAGTTGATGGGCTaGAGTAGTTTAGATAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ACGARFWGRQARQPVGRWRELMG*SSLDRG Trigger: CCCTCTATCTAAACTACTCAAGCCCATCAACTCCCT...CCACCTGCCAACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
||
| 3UTR TCA 72 bp | CCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTaGAGACTGAGGCTGATCTGGAGCTCAGGGAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: PLAMPAGNPSAQ*RLRLIWSSGRL Trigger: AAGTCTCCCTGAGCTCCAGATCAGCCTCAGTCTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070709.9 ENSMUST00000177058.8 |
||
| 3UTR CCA 72 bp | GGTTGGCTGTCCATTTGCTTCTTGACTAGACAGCCCTaGGCTTGGGTCTCTCCCTCTAGGGCCCAAGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GWLSICFLTRQP*AWVSPSRAQVQ Trigger: CTGAACTTGGGCCCTAGAGGGAGAGACCCAAGCCCAGGGCTGTCTAGTCAAGAAGCAAATGGACAGCCAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACAGATGGAAGTAGAGTaGGTCCCTCAACTGAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GSQPGTMYLQMEVELVPQQMEVE*VPQLRG Trigger: GCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTG...TTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| 3UTR TCA 72 bp | CACATACCCCCTGCTTCTGGTGGTAGAGACTCCTGCTaGCCTGAGGTGTCCAGTTTGGTTGGCTGTCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: HIPPASGGRDSC*PEVSSLVGCPF Trigger: AAATGGACAGCCAACCAAACTGGACACCTCAGGTCAGCAGGAGTCTCTACCACCAGAAGCAGGGGGTATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
||
| 3UTR CCA 72 bp | AGGGTGAGATTACCTGATCTGGAGCTCAGGGAGACTTaGCTCACATACCCCCTGCTTCTGGTGGTAGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: RVRLPDLELRET*LTYPLLLVVET Trigger: AGTCTCTACCACCAGAAGCAGGGGGTATGTGAGCCAAGTCTCCCTGAGCTCCAGATCAGGTAATCTCACCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
||
| 3UTR GCA 72 bp | CTGAGGCTTGGAAGAAAGGAAGGGAAGCAGTGTTGTTaGCTAGTCAAGCTCTGTTCTCCAGGCATTGTATTG | + |
|
Preference number: 3 (lower is better) Translates to: LRLGRKEGKQCC*LVKLCSPGIVL Trigger: CAATACAATGCCTGGAGAACAGAGCTTGACTAGGCAACAACACTGCTTCCCTTCCTTTCTTCCAAGCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
||
| CDS-3UTR TCA 90 bp | CTGTCCAGTGGAGGGGAGAGCCTTCCTGGCTATCCGTCCCCTGGCAATGCCTGCCCTCCTCCAGCCGCCTaGCTACCCCCTGGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSGGESLPGYPSPGNACPPPAA*LPPGSC Trigger: GCAGGAGCCAGGGGGTAGTCAGGCGGCTGGAGGAGG...GCAGGCATTGCCAGGGGACGGATAGCCAGGAAGGCTCTCCCCTCCACTGGACAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | CCCACCGAGGGTAGGGCCTGGTCCCAGCAGCCACGCTCTAGCATGTGGAGCGAGTCCTTAGAGCGACCCTaGCGGACAAGTGGGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTEGRAWSQQPRSSMWSESLERP*RTSGGL Trigger: GAGGCCCCCACTTGTCCGTCAGGGTCGCTCTAAGGA...CTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCAGGCCCTACCCTCGGTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTGGAGGGGAGAGCCTTCCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTCTACCCCCTGGCTCCTaGCCTCCACCAGAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVEGRAFLAIRPLAMPAGLPPGS*PPPEPQ Trigger: CTGGGGCTCTGGTGGAGGGCAGGAGCCAGGGGGTAG...ACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGAAGGCTCTCCCCTCCACTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGCCTCCTCCAGCCGCCTaGCTACCCCCTGGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKAGQATCWQVGKGNRMRPPPAA*LPPGSC Trigger: GCAGGAGCCAGGGGGTAGTCAGGCGGCTGGAGGAGG...CCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCTGCCTTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCCCAGCAGCCACGCTCTAGCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCTACCCCCTGGCTCCTaGCCTCCACCAGAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSQQPRSSMWSEVLGKAGLPPGS*PPPEPQ Trigger: CTGGGGCTCTGGTGGAGGGCAGGAGCCAGGGGGTAG...GCCTGCCTTCCCCAAAACCTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTGGAGGGGAGAGCCTTCCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTCGCCTGACTACCCCCTaGCTCCTGCCCTCCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVEGRAFLAIRPLAMPAGRLTTP*LLPSTR Trigger: TCTGGTGGAGGGCAGGAGCCAGGGGGTAGTCAGGCG...ACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGAAGGCTCTCCCCTCCACTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CCGAGGGTAGGGCCTGGTCCCAGCAGCCACGCTCTAGCATGTGGAGCGAGGTTTTCTGCACTGAGTGGGTaGCTGCGGCCTGGGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRVGPGPSSHALACGARFSALSG*LRPGRV Trigger: CACCCTCCCAGGCCGCAGCCACCCACTCAGTGCAGA...AAACCTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCAGGCCCTACCCTCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGAATTGGGAGGGGCTCCTCCTGAGGGCTCTCAGCCGGGGACCATGTATCCGTTCTGCACTGAGTaGGTGGCTGCGGCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GWELGGAPPEGSQPGTMYPFCTE*VAAAWE Trigger: CTCCCAGGCCGCAGCCACCCACTCAGTGCAGAACGG...ATACATGGTCCCCGGCTGAGAGCCCTCAGGAGGAGCCCCTCCCAATTCCCAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTAAGGTGCTATTGCTTTAGGGGCCCACCGAGGGTAGGGCCTGGTCCCAGCCCGTTCTGCACTGAGTaGGTGGCTGCGGCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLRCYCFRGPPRVGPGPSPFCTE*VAAAWE Trigger: CTCCCAGGCCGCAGCCACCCACTCAGTGCAGAACGG...GCTGGGACCAGGCCCTACCCTCGGTGGGCCCCTAAAGCAATAGCACCTTAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | GTCCAAGCCAGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGCCTAAGGTGCAGACAGCCCTGGGCTTaGGTCTCTCCCTCTAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VQARAWASCAKMAGGLRCRQPWA*VSPSRA Trigger: GGCCCTAGAGGGAGAGACCCAAGCCCAGGGCTGTCT...GCACCTTAGGCCCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCTGGCTTGGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCATCCTGGAGTCTTCCGTTCTGCACTGAGTGGGTGGCTGCGGCCTGGGAGGGCATCATCAGGCTCTaGGCCCCTAGACGTGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LASWSLPFCTEWVAAAWEGIIRL*APRRAA Trigger: TGCCGCACGTCTAGGGGCTCAGAGCCTGATGATGCC...CTCCCAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCAGGATGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
||
| CDS-3UTR TCA 90 bp | GAGCTGTCCAGTGGAGGGGAGAGCCTTCCTGGCTATCCGTCCCCTGGCAATGCCTCCTTAGAGCGACCCTaGCGGACAAGTGGGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELSSGGESLPGYPSPGNASLERP*RTSGGL Trigger: GAGGCCCCCACTTGTCCGTCAGGGTCGCTCTAAGGA...GGCATTGCCAGGGGACGGATAGCCAGGAAGGCTCTCCCCTCCACTGGACAGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGGGAATTGGGAGGGGCTCCTCCTGAGGGCTCTCAGCCGGGGACCATGTATGTGGGGGCCTCTTGCTaGGGCTGCAGTGGATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GWELGGAPPEGSQPGTMYVGASC*GCSGCK Trigger: CTTGCATCCACTGCAGCCGCAGCAAGAGGCCCCCAC...ATACATGGTCCCCGGCTGAGAGCCCTCAGGAGGAGCCCCTCCCAATTCCCAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTGTCCAGTGGAGGGGAGAGCCTTCCTGGCTATCCGTCCCCTGGCAATGCCGTGGGGGCCTCTTGCTaGGGCTGCAGTGGATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELSSGGESLPGYPSPGNAVGASC*GCSGCK Trigger: CTTGCATCCACTGCAGCCGCAGCAAGAGGCCCCCAC...GGCATTGCCAGGGGACGGATAGCCAGGAAGGCTCTCCCCTCCACTGGACAGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGCTACCCCCTGGCTCCTaGCCTCCACCAGAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKAGQATCWQVGKGNRMRLPPGS*PPPEPQ Trigger: CTGGGGCTCTGGTGGAGGGCAGGAGCCAGGGGGTAG...CCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCTGCCTTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCGAGGGTAGGGCCTGGTCCCAGCAGCCACGCTCTAGCATGTGGAGCGAGTTGCTGCGGCTGCAGTaGATGCAAGGAGCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTEGRAWSQQPRSSMWSELLRLQ*MQGAAE Trigger: CTCTGCAGCTCCTTGCATCCACTGCAGCCGCAGCAA...CTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCAGGCCCTACCCTCGGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGGGCCTGGTCCCAGCAGCCACGCTCTAGCATGTGGAGCGAGGTTTTGGGGACCCTGACGGACAAGTaGGGGCCTCTTGCTGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRAWSQQPRSSMWSEVLGTLTDK*GPLAAA Trigger: AGCCGCAGCAAGAGGCCCCCACTTGTCCGTCAGGGT...CCCCAAAACCTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCAGGCCCTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | GCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTGGTCTGCACTGAGTGGGTaGCTGCGGCCTGGGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ACGARFWGRQARQPVGRWSALSG*LRPGRV Trigger: CACCCTCCCAGGCCGCAGCCACCCACTCAGTGCAGA...CCACCTGCCAACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCAGTGGAGGGGAGAGCCTTCCTGGCTATCCGTCCCCTGGCAATGCCTGCAGACAGCCCTGGGCTTaGGTCTCTCCCTCTAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSSGGESLPGYPSPGNACRQPWA*VSPSRA Trigger: GGCCCTAGAGGGAGAGACCCAAGCCCAGGGCTGTCT...GCAGGCATTGCCAGGGGACGGATAGCCAGGAAGGCTCTCCCCTCCACTGGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGAATTGGGAGGGGCTCCTCCTGAGGGCTCTCAGCCGGGGACCATGTATAGACAGCCCTGGGCTTaGGTCTCTCCCTCTAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWELGGAPPEGSQPGTMYRQPWA*VSPSRA Trigger: GGCCCTAGAGGGAGAGACCCAAGCCCAGGGCTGTCT...ATACATGGTCCCCGGCTGAGAGCCCTCAGGAGGAGCCCCTCCCAATTCCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | GTAGGGCCTGGTCCCAGCAGCCACGCTCTAGCATGTGGAGCGAGGTTTTGGGGATCCTTAGAGCGACCCTaGCGGACAAGTGGGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGPGPSSHALACGARFWGSLERP*RTSGGL Trigger: GAGGCCCCCACTTGTCCGTCAGGGTCGCTCTAAGGA...TCCCCAAAACCTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCAGGCCCTAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCAACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGGGCTGGGAATTGCCTCCTCCAGCCGCCTaGCTACCCCCTGGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QATCWQVGKGNRMRGWELPPPAA*LPPGSC Trigger: GCAGGAGCCAGGGGGTAGTCAGGCGGCTGGAGGAGG...CAATTCCCAGCCCCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGTTGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | GTAGGGCCTGGTCCCAGCAGCCACGCTCTAGCATGTGGAGCGAGGTTTTGGGGATCTTCCGTTCTGCACTaGGTGGGTGGCTGCGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGPGPSSHALACGARFWGSSVLH*VGGCGL Trigger: CAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGA...TCCCCAAAACCTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCAGGCCCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCAGTGGAGGGGAGAGCCTTCCTGGCTATCCGTCCCCTGGCAATGCCTGCATGTACAGCCCATGTTaGGGCGGCTCCAGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSGGESLPGYPSPGNACMYSPC*GGSRSG Trigger: GCCTGACCTGGAGCCGCCCCAACATGGGCTGTACAT...GCAGGCATTGCCAGGGGACGGATAGCCAGGAAGGCTCTCCCCTCCACTGGACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCCTGGTCCCAGCAGCCACGCTCTAGCATGTGGAGCGAGGTTTTGGGGAAGACCCTGACGGACAAGTaGGGGCCTCTTGCTGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAWSQQPRSSMWSEVLGKTLTDK*GPLAAA Trigger: AGCCGCAGCAAGAGGCCCCCACTTGTCCGTCAGGGT...CTTCCCCAAAACCTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCAGGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGCGCCTGACTACCCCCTaGCTCCTGCCCTCCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GKAGQATCWQVGKGNRMRRLTTP*LLPSTR Trigger: TCTGGTGGAGGGCAGGAGCCAGGGGGTAGTCAGGCG...CCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCTGCCTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | AGCCACGCTCTAGCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTTCTGCACTGAGTGGGTaGCTGCGGCCTGGGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHALACGARFWGRQARQPSALSG*LRPGRV Trigger: CACCCTCCCAGGCCGCAGCCACCCACTCAGTGCAGA...AGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGCTAGAGCGTGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | AAGATGGCAGGGGGCCTAAGGTGCTATTGCTTTAGGGGCCCACCGAGGGTAGGGCCGTTCTGCACTGAGTaGGTGGCTGCGGCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KMAGGLRCYCFRGPPRVGPFCTE*VAAAWE Trigger: CTCCCAGGCCGCAGCCACCCACTCAGTGCAGAACGG...CCCTACCCTCGGTGGGCCCCTAAAGCAATAGCACCTTAGGCCCCCTGCCATCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCCAAGATGGCAGGGGGCCTAAGGTGCTATTGCTTTAGGGGCCCACCGAGGGGCATCATCAGGCTCTaGGCCCCTAGACGTGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CAKMAGGLRCYCFRGPPRGIIRL*APRRAA Trigger: TGCCGCACGTCTAGGGGCTCAGAGCCTGATGATGCC...CCTCGGTGGGCCCCTAAAGCAATAGCACCTTAGGCCCCCTGCCATCTTGGCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | GCCAAGATGGCAGGGGGCCTAAGGTGCTATTGCTTTAGGGGCCCACCGAGGGTAGGCATCATCAGGCTCTaGGCCCCTAGACGTGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKMAGGLRCYCFRGPPRVGIIRL*APRRAA Trigger: TGCCGCACGTCTAGGGGCTCAGAGCCTGATGATGCC...TACCCTCGGTGGGCCCCTAAAGCAATAGCACCTTAGGCCCCCTGCCATCTTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | AGCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTGTCTTCCGTTCTGCACTaGGTGGGTGGCTGCGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SMWSEVLGKAGQATCWQVSSVLH*VGGCGL Trigger: CAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGA...CACCTGCCAACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | GTCCAAGCCAGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGCCTAAGGTGCTCCACACTGGAGAGCTaGACCGTCCCTTCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQARAWASCAKMAGGLRCSTLES*TVPSPS Trigger: TGAAGGAGAAGGGACGGTGCAGCTCTCCAGTGTGGA...GCACCTTAGGCCCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCTGGCTTGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGTCCAGTGGAGGGGAGAGCCTTCCTGGCTATCCGTCCCCTGGCAATGCGCCTCTTGCTGCGGCTaGAGTGGATGCAAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAVQWRGEPSWLSVPWQCASCCG*SGCKEL Trigger: CAGCTCCTTGCATCCACTGCAGCCGCAGCAAGAGGC...GCATTGCCAGGGGACGGATAGCCAGGAAGGCTCTCCCCTCCACTGGACAGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCAGGCAACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGGGCTGGGAGTGGGGGCCTCTTGCTaGGGCTGCAGTGGATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPGNLLAGGEREQNEGLGVGASC*GCSGCK Trigger: CTTGCATCCACTGCAGCCGCAGCAAGAGGCCCCCAC...TCCCAGCCCCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCCAAGATGGCAGGGGGCCTAAGGTGCTATTGCTTTAGGGGCCCACCGAGGGTGGGGGCCTCTTGCTaGGGCTGCAGTGGATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CAKMAGGLRCYCFRGPPRVGASC*GCSGCK Trigger: CTTGCATCCACTGCAGCCGCAGCAAGAGGCCCCCAC...CCTCGGTGGGCCCCTAAAGCAATAGCACCTTAGGCCCCCTGCCATCTTGGCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | GCATCCTGGAGTCTTCCGTTCTGCACTGAGTGGGTGGCTGCGGCCTGGGAGGGTTTGCTGCGGCTGCAGTaGATGCAAGGAGCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASWSLPFCTEWVAAAWEGLLRLQ*MQGAAE Trigger: CTCTGCAGCTCCTTGCATCCACTGCAGCCGCAGCAA...ACCCTCCCAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCAGGATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168056.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGGGCTGGGAATTGGGAGGGTCTGCACTGAGTGGGTaGCTGCGGCCTGGGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TCWQVGKGNRMRGWELGGSALSG*LRPGRV Trigger: CACCCTCCCAGGCCGCAGCCACCCACTCAGTGCAGA...CCCTCCCAATTCCCAGCCCCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGCCTAAGGTGCTATTGCTTTGGCATCATCAGGCTCTaGGCCCCTAGACGTGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RAWASCAKMAGGLRCYCFGIIRL*APRRAA Trigger: TGCCGCACGTCTAGGGGCTCAGAGCCTGATGATGCC...AAAGCAATAGCACCTTAGGCCCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTCCCTCTAGGGCCCAAGTTCAGTTCTGCAGAGGTTCCAGGGGTCCCCTCATCCTTAGAGCGACCCTaGCGGACAAGTGGGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLPLGPKFSSAEVPGVPSSLERP*RTSGGL Trigger: GAGGCCCCCACTTGTCCGTCAGGGTCGCTCTAAGGA...TGAGGGGACCCCTGGAACCTCTGCAGAACTGAACTTGGGCCCTAGAGGGAGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168056.9 |
||
| CDS-3UTR TCA 90 bp | GAGCTGTCCAGTGGAGGGGAGAGCCTTCCTGGCTATCCGTCCCCTGGCAATGCCAGACTCCTGCTGACCTaGGGTGTCCAGTTTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELSSGGESLPGYPSPGNARLLLT*GVQFGW Trigger: CCAACCAAACTGGACACCTCAGGTCAGCAGGAGTCT...GGCATTGCCAGGGGACGGATAGCCAGGAAGGCTCTCCCCTCCACTGGACAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070709.9 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | GCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTGGTGGAGTCTTCCGTTCTaGACTGAGTGGGTGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ACGARFWGRQARQPVGRWWSLPF*TEWVAA Trigger: CGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCA...CCACCTGCCAACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | TATGAAGTCCAAGCCAGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGCCTAATGTACAGCCCATGTTaGGGCGGCTCCAGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YEVQARAWASCAKMAGGLMYSPC*GGSRSG Trigger: GCCTGACCTGGAGCCGCCCCAACATGGGCTGTACAT...TAGGCCCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCTGGCTTGGACTTCATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCCTCTAGGGCCCAAGTTCAGTTCTGCAGAGGTTCCAGGGGTCCCCTCAACCCTGACGGACAAGTaGGGGCCTCTTGCTGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLGPKFSSAEVPGVPSTLTDK*GPLAAA Trigger: AGCCGCAGCAAGAGGCCCCCACTTGTCCGTCAGGGT...TGAGGGGACCCCTGGAACCTCTGCAGAACTGAACTTGGGCCCTAGAGGGAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168056.9 |
||
| CDS-3UTR CCA 90 bp | CACGCTCTAGCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTACCCTGACGGACAAGTaGGGGCCTCTTGCTGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HALACGARFWGRQARQPVTLTDK*GPLAAA Trigger: AGCCGCAGCAAGAGGCCCCCACTTGTCCGTCAGGGT...AACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGCTAGAGCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGGAGGCGCCTGACTACCCCCTaGCTCCTGCCCTCCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QMEVELVPQLRGRAVQWRRLTTP*LLPSTR Trigger: TCTGGTGGAGGGCAGGAGCCAGGGGGTAGTCAGGCG...CCTCCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTAGGGCCCAAGTTCAGTTCTGCAGAGGTTCCAGGGGTCCCCTCAAGTGTAGGCATCATCAGGCTCTaGGCCCCTAGACGTGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLGPKFSSAEVPGVPSSVGIIRL*APRRAA Trigger: TGCCGCACGTCTAGGGGCTCAGAGCCTGATGATGCC...TACACTTGAGGGGACCCCTGGAACCTCTGCAGAACTGAACTTGGGCCCTAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
||
| CDS-3UTR TCA 90 bp | CAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGGAGGTCCTTAGAGCGACCCTaGCGGACAAGTGGGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QMEVELVPQLRGRAVQWRSLERP*RTSGGL Trigger: GAGGCCCCCACTTGTCCGTCAGGGTCGCTCTAAGGA...CCTCCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCTGAGGGCTCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGTCTTCCGTTCTGCACTaGGTGGGTGGCTGCGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPEGSQPGTMYLQMEVELSSVLH*VGGCGL Trigger: CAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGA...CAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGAGCCCTCAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | GCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTGGTCCACACTGGAGAGCTaGACCGTCCCTTCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ACGARFWGRQARQPVGRWSTLES*TVPSPS Trigger: TGAAGGAGAAGGGACGGTGCAGCTCTCCAGTGTGGA...CCACCTGCCAACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | CTCACATACCCCCTGCTTCTGGTGGTAGAGACTCCTGCTGACCTGAGGTGTCCAGTGGGGGCCTCTTGCTaGGGCTGCAGTGGATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTYPLLLVVETPADLRCPVGASC*GCSGCK Trigger: CTTGCATCCACTGCAGCCGCAGCAAGAGGCCCCCAC...TGGACACCTCAGGTCAGCAGGAGTCTCTACCACCAGAAGCAGGGGGTATGTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168056.9 |
||
| CDS-3UTR GCA 90 bp | GTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCACTACCCCCTGGCTCCTaGCCTCCACCAGAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSPDGSRVGPSTEGQSCPLPPGS*PPPEPQ Trigger: CTGGGGCTCTGGTGGAGGGCAGGAGCCAGGGGGTAG...TGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGATAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | CCACGCTCTAGCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTGGAGTCTTCCGTTCTaGACTGAGTGGGTGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PRSSMWSEVLGKAGQATCWSLPF*TEWVAA Trigger: CGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCA...ACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGCTAGAGCGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGCAGAGGTTCCAGGGGTCCCCTCAAGTGTACAAGGGACGAGGCTGGCAATGTACAGCCCATGTTaGGGCGGCTCCAGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSAEVPGVPSSVQGTRLAMYSPC*GGSRSG Trigger: GCCTGACCTGGAGCCGCCCCAACATGGGCTGTACAT...TGCCAGCCTCGTCCCTTGTACACTTGAGGGGACCCCTGGAACCTCTGCAGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
||
| CDS-3UTR CCA 90 bp | AGCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTGTTGCTGCGGCTGCAGTaGATGCAAGGAGCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SMWSEVLGKAGQATCWQVLLRLQ*MQGAAE Trigger: CTCTGCAGCTCCTTGCATCCACTGCAGCCGCAGCAA...CACCTGCCAACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTGGAGGGGAGAGCCTTCCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTTGGTCTCTCCAGGTCTaGGACGGCTTTTTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PVEGRAFLAIRPLAMPAGWSLQV*DGFFLP Trigger: AGGAAGGAAAAAGCCGTCCCAGACCTGGAGAGACCA...ACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGAAGGCTCTCCCCTCCACTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CGAGGCTGGCATCCTGGAGTCTTCCGTTCTGCACTGAGTGGGTGGCTGCGGCCTCCTGCAGGCTGGAGGTaGCATCCACACTTCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGWHPGVFRSALSGWLRPPAGWR*HPHFIL Trigger: CAAAATGAAGTGTGGATGCCACCTCCAGCCTGCAGG...AGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCAGGATGCCAGCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168056.9 |
||
| CDS-3UTR TCA 90 bp | AGAGCTGTCCAGTGGAGGGGAGAGCCTTCCTGGCTATCCGTCCCCTGGCAATGCAGCCTACAAGGCCCATaGGGAAGAAGACCAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RAVQWRGEPSWLSVPWQCSLQGP*GRRPAQ Trigger: TTGTGCTGGTCTTCTTCCTCATGGGCCTTGTAGGCT...GCATTGCCAGGGGACGGATAGCCAGGAAGGCTCTCCCCTCCACTGGACAGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGGCAGGGGGCCTAAGGTGCTATTGCTTTAGGGGCCCACCGAGGGTAGGGTCCACACTGGAGAGCTaGACCGTCCCTTCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KMAGGLRCYCFRGPPRVGSTLES*TVPSPS Trigger: TGAAGGAGAAGGGACGGTGCAGCTCTCCAGTGTGGA...CCCTACCCTCGGTGGGCCCCTAAAGCAATAGCACCTTAGGCCCCCTGCCATCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCAGGCAACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGGGCTGGGATCCACACTGGAGAGCTaGACCGTCCCTTCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPGNLLAGGEREQNEGLGSTLES*TVPSPS Trigger: TGAAGGAGAAGGGACGGTGCAGCTCTCCAGTGTGGA...TCCCAGCCCCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGGGCTGGGAATTGGGAGGGTGGAGTCTTCCGTTCTaGACTGAGTGGGTGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TCWQVGKGNRMRGWELGGWSLPF*TEWVAA Trigger: CGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCA...CCCTCCCAATTCCCAGCCCCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CTCACATACCCCCTGCTTCTGGTGGTAGAGACTCCTGCTGACCTGAGGTGTCCAATGTACAGCCCATGTTaGGGCGGCTCCAGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTYPLLLVVETPADLRCPMYSPC*GGSRSG Trigger: GCCTGACCTGGAGCCGCCCCAACATGGGCTGTACAT...TGGACACCTCAGGTCAGCAGGAGTCTCTACCACCAGAAGCAGGGGGTATGTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGGGCTGGGAATTGGGAGGGTTGCTGCGGCTGCAGTaGATGCAAGGAGCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TCWQVGKGNRMRGWELGGLLRLQ*MQGAAE Trigger: CTCTGCAGCTCCTTGCATCCACTGCAGCCGCAGCAA...CCCTCCCAATTCCCAGCCCCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGTCCCAGCAGCCACGCTCTAGCATGTGGAGCGAGGTTTTGGGGAAGGCAGTGGTCTCTCCAGGTCTaGGACGGCTTTTTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGPSSHALACGARFWGRQWSLQV*DGFFLP Trigger: AGGAAGGAAAAAGCCGTCCCAGACCTGGAGAGACCA...CTGCCTTCCCCAAAACCTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTCGCCTGACTACCCCCTaGCTCCTGCCCTCCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSAGDHVSPDGSRVGPSTRLTTP*LLPSTR Trigger: TCTGGTGGAGGGCAGGAGCCAGGGGGTAGTCAGGCG...AGTTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGAGACAGCCCTGGGCTTaGGTCTCTCCCTCTAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPDGSRVGPSTEGQSCPVRQPWA*VSPSRA Trigger: GGCCCTAGAGGGAGAGACCCAAGCCCAGGGCTGTCT...CACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGCCTAAGGTGCTATTGCTTTGGTAGAGACTCCTGCTaGCCTGAGGTGTCCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RAWASCAKMAGGLRCYCFGRDSC*PEVSSL Trigger: CAAACTGGACACCTCAGGTCAGCAGGAGTCTCTACC...AAAGCAATAGCACCTTAGGCCCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070709.9 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGGAGTTGCTGCGGCTGCAGTaGATGCAAGGAGCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PDGSRVGPSTEGQSCPVELLRLQ*MQGAAE Trigger: CTCTGCAGCTCCTTGCATCCACTGCAGCCGCAGCAA...CTCCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | ACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTCCGTTCTGCACTGAGTaGGTGGCTGCGGCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TMYLQMEVELVPQLRGRAPFCTE*VAAAWE Trigger: CTCCCAGGCCGCAGCCACCCACTCAGTGCAGAACGG...AGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| 3UTR CAA 72 bp | CAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTaGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPGTMYLQMEVE*VPQLRGRAVQW Trigger: CCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGCAGAGGTTCCAGGGGTCCCCTCAAGTGTACAAGGGACGAGGCTGGCAAGCCTACAAGGCCCATaGGGAAGAAGACCAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SSAEVPGVPSSVQGTRLASLQGP*GRRPAQ Trigger: TTGTGCTGGTCTTCTTCCTCATGGGCCTTGTAGGCT...TGCCAGCCTCGTCCCTTGTACACTTGAGGGGACCCCTGGAACCTCTGCAGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
||
| CDS-3UTR TCA 90 bp | AAGATGGCAGGGGGCCTAAGGTGCTATTGCTTTAGGGGCCCACCGAGGGTAGGGTCGGAATCTGCCCACTaGAAAAACAGTGGTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KMAGGLRCYCFRGPPRVGSESAH*KNSGLS Trigger: GGAGAGACCACTGTTTTTTCAGTGGGCAGATTCCGA...CCCTACCCTCGGTGGGCCCCTAAAGCAATAGCACCTTAGGCCCCCTGCCATCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | AGCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTGTCGGAATCTGCCCACTaGAAAAACAGTGGTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SMWSEVLGKAGQATCWQVSESAH*KNSGLS Trigger: GGAGAGACCACTGTTTTTTCAGTGGGCAGATTCCGA...CACCTGCCAACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTATGTACAGCCCATGTTaGGGCGGCTCCAGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSAGDHVSPDGSRVGPSTMYSPC*GGSRSG Trigger: GCCTGACCTGGAGCCGCCCCAACATGGGCTGTACAT...AGTTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGCTGTCCAGTGGAGGGGAGAGCCTTCCTGGCTATCCGTCCCCTGGCAATTCTTCTTGAGCACGTaGCAGATCATGAAGCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: GRAVQWRGEPSWLSVPWQFFLST*QIMKPT Trigger: TGTAGGCTTCATGATCTGCCACGTGCTCAAGAAGAA...TTGCCAGGGGACGGATAGCCAGGAAGGCTCTCCCCTCCACTGGACAGCTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGCTCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTAGCCTACAAGGCCCATaGGGAAGAAGACCAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: EGSQPGTMYLQMEVELVPSLQGP*GRRPAQ Trigger: TTGTGCTGGTCTTCTTCCTCATGGGCCTTGTAGGCT...AGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGAGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | CTCACATACCCCCTGCTTCTGGTGGTAGAGACTCCTGCTGACCTGAGGTGTCCAAGCCTACAAGGCCCATaGGGAAGAAGACCAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LTYPLLLVVETPADLRCPSLQGP*GRRPAQ Trigger: TTGTGCTGGTCTTCTTCCTCATGGGCCTTGTAGGCT...TGGACACCTCAGGTCAGCAGGAGTCTCTACCACCAGAAGCAGGGGGTATGTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
||
| CDS-3UTR TCA 90 bp | GGCTCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAAAGACTCCTGCTGACCTaGGGTGTCCAGTTTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSQPGTMYLQMEVELVPQRLLLT*GVQFGW Trigger: CCAACCAAACTGGACACCTCAGGTCAGCAGGAGTCT...TTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070709.9 ENSMUST00000177058.8 |
||
| CDS-3UTR GCA 90 bp | GTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCATGGAGTCTTCCGTTCTaGACTGAGTGGGTGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: VSPDGSRVGPSTEGQSCPWSLPF*TEWVAA Trigger: CGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCA...TGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCTTGGAAGAAAGGAAGGGAAGCAGTGTTGTTGCCTAGTCAAGCTCTGTACCCTGACGGACAAGTaGGGGCCTCTTGCTGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRLGRKEGKQCCCLVKLCTLTDK*GPLAAA Trigger: AGCCGCAGCAAGAGGCCCCCACTTGTCCGTCAGGGT...ACAGAGCTTGACTAGGCAACAACACTGCTTCCCTTCCTTTCTTCCAAGCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
||
| CDS-3UTR CCA 90 bp | CAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGGAGGTGGTCTCTCCAGGTCTaGGACGGCTTTTTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QMEVELVPQLRGRAVQWRWSLQV*DGFFLP Trigger: AGGAAGGAAAAAGCCGTCCCAGACCTGGAGAGACCA...CCTCCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCTGCTGACCTGAGGTGTCCAGTTTGGTTGGCTGTCCATTTGCTTCTTGACCTCCGTCCTGCAGGCTaGAGGTGGCATCCACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPADLRCPVWLAVHLLLDLRPAG*RWHPHF Trigger: GAAGTGTGGATGCCACCTCCAGCCTGCAGGACGGAG...GTCAAGAAGCAAATGGACAGCCAACCAAACTGGACACCTCAGGTCAGCAGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168056.9 |
||
| CDS-3UTR TCA 90 bp | GAGACTTGGCTCACATACCCCCTGCTTCTGGTGGTAGAGACTCCTGAGAGGAGGTCGGAATCTGCCCACTaGAAAAACAGTGGTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETWLTYPLLLVVETPERRSESAH*KNSGLS Trigger: GGAGAGACCACTGTTTTTTCAGTGGGCAGATTCCGA...CCTCCTCTCAGGAGTCTCTACCACCAGAAGCAGGGGGTATGTGAGCCAAGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
||
| CDS-3UTR TCA 90 bp | CTCACATACCCCCTGCTTCTGGTGGTAGAGACTCCTGCTGACCTGAGGTGTCCATCGGAATCTGCCCACTaGAAAAACAGTGGTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTYPLLLVVETPADLRCPSESAH*KNSGLS Trigger: GGAGAGACCACTGTTTTTTCAGTGGGCAGATTCCGA...TGGACACCTCAGGTCAGCAGGAGTCTCTACCACCAGAAGCAGGGGGTATGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168056.9 |
||
| CDS-3UTR TCA 90 bp | TTATTGACAGTGAATAAAGGGTATGAAGTCCAAGCCAGGGCCTGGGCCTCTTGTTCTTCCGTTCTGCACTaGGTGGGTGGCTGCGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTVNKGYEVQARAWASCSSVLH*VGGCGL Trigger: CAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGA...ACAAGAGGCCCAGGCCCTGGCTTGGACTTCATACCCTTTATTCACTGTCAATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | GTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGGTAGAGACTCCTGCTaGCCTGAGGTGTCCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSPDGSRVGPSTEGQSCPGRDSC*PEVSSL Trigger: CAAACTGGACACCTCAGGTCAGCAGGAGTCTCTACC...TGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070709.9 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCATCCTGGAGTCTTCCGTTCTGCACTGAGTGGGTGGCTGCGGCCTGGGAGTCGGAATCTTCATTTTaGATGATGCAGCGAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: LASWSLPFCTEWVAAAWESESSF*MMQRTI Trigger: GATTGTTCGCTGCATCATCCAAAATGAAGATTCCGA...CTCCCAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCAGGATGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163128.9 |
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| 3UTR CAA 72 bp | TGTTGCCTAGTCAAGCTCTGTTCTCCAGGCATTGTATaGTATCTCCTGGAGGAACCTGTGCCCGCTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CCLVKLCSPGIV*YLLEEPVPAPH Trigger: GTGGGGAGCGGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGAACAGAGCTTGACTAGGCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
||
| CDS-3UTR TCA 90 bp | GAGGGCTCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTTGGCTTCATTTTGGATaGTGCAGCGAACAATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGSQPGTMYLQMEVELVPWLHFG*CSEQSA Trigger: AGCGGATTGTTCGCTGCATCATCCAAAATGAAGCCA...AGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGAGCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
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| CDS-3UTR TCA 90 bp | TCTCTCCCTCTAGGGCCCAAGTTCAGTTCTGCAGAGGTTCCAGGGGTCCCCTCAACACTTCATTTTGGATaGTGCAGCGAACAATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLGPKFSSAEVPGVPSTLHFG*CSEQSA Trigger: AGCGGATTGTTCGCTGCATCATCCAAAATGAAGTGT...TGAGGGGACCCCTGGAACCTCTGCAGAACTGAACTTGGGCCCTAGAGGGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168056.9 |
||
| CDS-3UTR CCA 90 bp | TCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGTGGTCTCTCCAGGTCTaGGACGGCTTTTTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQPGTMYLQMEVELVPQLWSLQV*DGFFLP Trigger: AGGAAGGAAAAAGCCGTCCCAGACCTGGAGAGACCA...CAGTTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | GTCAAGCTCTGTTCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTGTGCCCAGCCTACAAGGCCCATaGGGAAGAAGACCAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VKLCSPGIVLYLLEEPVPSLQGP*GRRPAQ Trigger: TTGTGCTGGTCTTCTTCCTCATGGGCCTTGTAGGCT...GGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGAACAGAGCTTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
||
| CDS-3UTR TCA 90 bp | GGCTCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAATGGCTTCATTTTGGATaGTGCAGCGAACAATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSQPGTMYLQMEVELVPQWLHFG*CSEQSA Trigger: AGCGGATTGTTCGCTGCATCATCCAAAATGAAGCCA...TTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGTCGGAATCTGCCCACTaGAAAAACAGTGGTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQPGTMYLQMEVELVPQLSESAH*KNSGLS Trigger: GGAGAGACCACTGTTTTTTCAGTGGGCAGATTCCGA...CAGTTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCTAGGGCCCAAGTTCAGTTCTGCAGAGGTTCCAGGGGTCCCCTCAAGTGTAATCTTCATTTTGGATaGTGCAGCGAACAATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSRAQVQFCRGSRGPLKCNLHFG*CSEQSA Trigger: AGCGGATTGTTCGCTGCATCATCCAAAATGAAGATT...ACACTTGAGGGGACCCCTGGAACCTCTGCAGAACTGAACTTGGGCCCTAGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163128.9 |
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| CDS-3UTR CCA 90 bp | CTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGGTTCTTCTTGAGCACGTaGCAGATCATGAAGCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: LQMEVELVPQLRGRAVQWFFLST*QIMKPT Trigger: TGTAGGCTTCATGATCTGCCACGTGCTCAAGAAGAA...CCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTAGGGCCCAAGTTCAGTTCTGCAGAGGTTCCAGGGGTCCCCTCAAGTGTATTCTTCTTGAGCACGTaGCAGATCATGAAGCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: PLGPKFSSAEVPGVPSSVFFLST*QIMKPT Trigger: TGTAGGCTTCATGATCTGCCACGTGCTCAAGAAGAA...TACACTTGAGGGGACCCCTGGAACCTCTGCAGAACTGAACTTGGGCCCTAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
||
| CDS-3UTR CCA 90 bp | ACTCCTGCTGACCTGAGGTGTCCAGTTTGGTTGGCTGTCCATTTGCTTCTTGACTGGTCTCTCCAGGTCTaGGACGGCTTTTTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPADLRCPVWLAVHLLLDWSLQV*DGFFLP Trigger: AGGAAGGAAAAAGCCGTCCCAGACCTGGAGAGACCA...GTCAAGAAGCAAATGGACAGCCAACCAAACTGGACACCTCAGGTCAGCAGGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168056.9 |
||
| CDS-3UTR TCA 90 bp | TCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGTGGCTTCATTTTGGATaGTGCAGCGAACAATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQPGTMYLQMEVELVPQLWLHFG*CSEQSA Trigger: AGCGGATTGTTCGCTGCATCATCCAAAATGAAGCCA...CAGTTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGTTCTTCTTGAGCACGTaGCAGATCATGAAGCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: QPGTMYLQMEVELVPQLRFFLST*QIMKPT Trigger: TGTAGGCTTCATGATCTGCCACGTGCTCAAGAAGAA...CCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| 3UTR CAA 72 bp | GTTCACCCACCTCCAGGATTCAGGGAGTTGATGGGCTaGAGTAGTTTAGATAGAGGGCAGGAGGGTGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: VHPPPGFRELMG*SSLDRGQEGEI Trigger: AATCTCACCCTCCTGCCCTCTATCTAAACTACTCAAGCCCATCAACTCCCTGAATCCTGGAGGTGGGTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
||
| 3UTR CAA 72 bp | AAGCTTACAGTTCACCCACCTCCAGGATTCAGGGAGTaGATGGGCTTGAGTAGTTTAGATAGAGGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KLTVHPPPGFRE*MGLSSLDRGQE Trigger: CTCCTGCCCTCTATCTAAACTACTCAAGCCCATCAACTCCCTGAATCCTGGAGGTGGGTGAACTGTAAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
||
| CDS-3UTR CCA 90 bp | ACTCCTGCTGACCTGAGGTGTCCAGTTTGGTTGGCTGTCCATTTGCTTCTTGACTTCTTCTTGAGCACGTaGCAGATCATGAAGCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: TPADLRCPVWLAVHLLLDFFLST*QIMKPT Trigger: TGTAGGCTTCATGATCTGCCACGTGCTCAAGAAGAA...GTCAAGAAGCAAATGGACAGCCAACCAAACTGGACACCTCAGGTCAGCAGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
||
| CDS-3UTR CCA 90 bp | TCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGGCATTGGCTTCATTTTaGATGATGCAGCGAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: SQPGTMYLQMEVELVPQLALASF*MMQRTI Trigger: GATTGTTCGCTGCATCATCCAAAATGAAGCCAATGC...CAGTTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | GTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGCATTGGCTTCATTTTaGATGATGCAGCGAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: VSPDGSRVGPSTEGQSCPALASF*MMQRTI Trigger: GATTGTTCGCTGCATCATCCAAAATGAAGCCAATGC...TGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTTACAGTTCACCCACCTCCAGGATTCAGGGAGTTGATGGGCTTGAGTAGTGCATTGGCTTCATTTTaGATGATGCAGCGAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: KLTVHPPPGFRELMGLSSALASF*MMQRTI Trigger: GATTGTTCGCTGCATCATCCAAAATGAAGCCAATGC...ACTACTCAAGCCCATCAACTCCCTGAATCCTGGAGGTGGGTGAACTGTAAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091932.12 |
||
| CDS-3UTR CAA 90 bp | GGTAGGGCCTGGTCCCAGCAGCCACGCTCTAGCATGTGGAGCGAGGTTTTGGGGACAAGTGGGGGCCTCTaGCTGCGGCTGCAGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GRAWSQQPRSSMWSEVLGTSGGL*LRLQWM Trigger: CATCCACTGCAGCCGCAGCAAGAGGCCCCCACTTGT...CCCCAAAACCTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCAGGCCCTACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | GAAGGCAGGCCAGGCAACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGGGACAAGTGGGGGCCTCTaGCTGCGGCTGCAGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: EGRPGNLLAGGEREQNEGTSGGL*LRLQWM Trigger: CATCCACTGCAGCCGCAGCAAGAGGCCCCCACTTGT...CCCCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCTGCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | CACGCTCTAGCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTCATGTACAGCCCATGTaGGGGCGGCTCCAGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: HALACGARFWGRQARQPVHVQPM*GRLQVR Trigger: CCTGACCTGGAGCCGCCCCAACATGGGCTGTACATG...AACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGCTAGAGCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | ACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGGGCTGGGAATTGGGAGGGACAAGTGGGGGCCTCTaGCTGCGGCTGCAGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: TCWQVGKGNRMRGWELGGTSGGL*LRLQWM Trigger: CATCCACTGCAGCCGCAGCAAGAGGCCCCCACTTGT...CCCTCCCAATTCCCAGCCCCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS CCA 90 bp | TCTGGGACGGCTTTTTCCTTCCTTAGAGCGACCCTGACGGACAAGTaGGGGCCTCTTGCTGCGGCTGCAGTGGATGCAAGGAGCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: SGTAFSFLRATLTDK*GPLAAAAVDARSCR Trigger: TCTGCAGCTCCTTGCATCCACTGCAGCCGCAGCAAGAGGCCCCCACTTGTCCGTCAGGGTCGCTCTAAGGAAGGAAAAAGCCGTCCCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000163591.9 ENSMUST00000168056.9 ENSMUST00000169498.3 ENSMUST00000176104.8 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | CTCACATACCCCCTGCTTCTGGTGGTAGAGACTCCTGCTGACCTGAGGTGTCCACATGTACAGCCCATGTaGGGGCGGCTCCAGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LTYPLLLVVETPADLRCPHVQPM*GRLQVR Trigger: CCTGACCTGGAGCCGCCCCAACATGGGCTGTACATG...TGGACACCTCAGGTCAGCAGGAGTCTCTACCACCAGAAGCAGGGGGTATGTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
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| CDS-3UTR CAA 90 bp | CCTCCTGAGGGCTCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGACAAGTGGGGGCCTCTaGCTGCGGCTGCAGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: PPEGSQPGTMYLQMEVELTSGGL*LRLQWM Trigger: CATCCACTGCAGCCGCAGCAAGAGGCCCCCACTTGT...CAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGAGCCCTCAGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | GCTGGGAATTGGGAGGGGCTCCTCCTGAGGGCTCTCAGCCGGGGACCATGTATCCCTGAGGTGTCCAGTTaGGTTGGCTGTCCATTTGCT | + |
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Preference number: 5 (lower is better) Translates to: AGNWEGLLLRALSRGPCIPEVSS*VGCPFA Trigger: AGCAAATGGACAGCCAACCAAACTGGACACCTCAGG...GATACATGGTCCCCGGCTGAGAGCCCTCAGGAGGAGCCCCTCCCAATTCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | CCAGTGGAGGGGAGAGCCTTCCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTCCTGAGGTGTCCAGTTaGGTTGGCTGTCCATTTGCT | + |
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Preference number: 5 (lower is better) Translates to: PVEGRAFLAIRPLAMPAGPEVSS*VGCPFA Trigger: AGCAAATGGACAGCCAACCAAACTGGACACCTCAGG...ACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGAAGGCTCTCCCCTCCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | GGCAGGCCAGGCAACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGGGCTGCCTGAGGTGTCCAGTTaGGTTGGCTGTCCATTTGCT | + |
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Preference number: 5 (lower is better) Translates to: GRPGNLLAGGEREQNEGLPEVSS*VGCPFA Trigger: AGCAAATGGACAGCCAACCAAACTGGACACCTCAGG...CAGCCCCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | CTCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTCATGTACAGCCCATGTaGGGGCGGCTCCAGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LSAGDHVSPDGSRVGPSTHVQPM*GRLQVR Trigger: CCTGACCTGGAGCCGCCCCAACATGGGCTGTACATG...AGTTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGTCCCCGGCTGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | GAAGGCAGGCCAGGCAACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGGGCCTGAGGTGTCCAGTTaGGTTGGCTGTCCATTTGCT | + |
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Preference number: 5 (lower is better) Translates to: EGRPGNLLAGGEREQNEGPEVSS*VGCPFA Trigger: AGCAAATGGACAGCCAACCAAACTGGACACCTCAGG...CCCCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCTGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | ACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTCATGTACAGCCCATGTaGGGGCGGCTCCAGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TMYLQMEVELVPQLRGRAHVQPM*GRLQVR Trigger: CCTGACCTGGAGCCGCCCCAACATGGGCTGTACATG...AGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGATACATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | ACTCCTGCTGACCTGAGGTGTCCAGTTTGGTTGGCTGTCCATTTGCTTCTTGACCATGTACAGCCCATGTaGGGGCGGCTCCAGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: TPADLRCPVWLAVHLLLDHVQPM*GRLQVR Trigger: CCTGACCTGGAGCCGCCCCAACATGGGCTGTACATG...GTCAAGAAGCAAATGGACAGCCAACCAAACTGGACACCTCAGGTCAGCAGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163128.9 ENSMUST00000168056.9 |
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| CDS-3UTR CAA 90 bp | ACTCCTGCTGACCTGAGGTGTCCAGTTTGGTTGGCTGTCCATTTGCTTCTTGACACAAGTGGGGGCCTCTaGCTGCGGCTGCAGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: TPADLRCPVWLAVHLLLDTSGGL*LRLQWM Trigger: CATCCACTGCAGCCGCAGCAAGAGGCCCCCACTTGT...GTCAAGAAGCAAATGGACAGCCAACCAAACTGGACACCTCAGGTCAGCAGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168056.9 |
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| CDS-3UTR CAA 90 bp | GAGGGTAGGGCCTGGTCCCAGCAGCCACGCTCTAGCATGTGGAGCGAGGTTTTGAGGTGTCCAGTTTGGTaGGCTGTCCATTTGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: EGRAWSQQPRSSMWSEVLRCPVW*AVHLLL Trigger: AAGAAGCAAATGGACAGCCAACCAAACTGGACACCT...CAAAACCTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCAGGCCCTACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | GGGAATTGGGAGGGGCTCCTCCTGAGGGCTCTCAGCCGGGGACCATGTATCTCCAGCATTGGCTTCATTTaGGATGATGCAGCGAACAAT | + |
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Preference number: 5 (lower is better) Translates to: GNWEGLLLRALSRGPCISSIGFI*DDAANN Trigger: ATTGTTCGCTGCATCATCCAAAATGAAGCCAATGCT...GGAGATACATGGTCCCCGGCTGAGAGCCCTCAGGAGGAGCCCCTCCCAATTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | GCCAAGATGGCAGGGGGCCTAAGGTGCTATTGCTTTAGGGGCCCACCGAGGGTAAGGTGTCCAGTTTGGTaGGCTGTCCATTTGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: AKMAGGLRCYCFRGPPRVRCPVW*AVHLLL Trigger: AAGAAGCAAATGGACAGCCAACCAAACTGGACACCT...TACCCTCGGTGGGCCCCTAAAGCAATAGCACCTTAGGCCCCCTGCCATCTTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | CTGGCATCCTGGAGTCTTCCGTTCTGCACTGAGTGGGTGGCTGCGGCCTGGGAGCATCCACACTTCATTTaGGATGATGCAGCGAACAAT | + |
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Preference number: 5 (lower is better) Translates to: LASWSLPFCTEWVAAAWEHPHFI*DDAANN Trigger: ATTGTTCGCTGCATCATCCAAAATGAAGTGTGGATG...CTCCCAGGCCGCAGCCACCCACTCAGTGCAGAACGGAAGACTCCAGGATGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168056.9 |
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| CDS-3UTR CAA 90 bp | AGGGTAGGGCCTGGTCCCAGCAGCCACGCTCTAGCATGTGGAGCGAGGTTTTGGAGCATTGGCTTCATTTaGGATGATGCAGCGAACAAT | + |
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Preference number: 5 (lower is better) Translates to: RVGPGPSSHALACGARFWSIGFI*DDAANN Trigger: ATTGTTCGCTGCATCATCCAAAATGAAGCCAATGCT...CCAAAACCTCGCTCCACATGCTAGAGCGTGGCTGCTGGGACCAGGCCCTACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | CACGCTCTAGCATGTGGAGCGAGGTTTTGGGGAAGGCAGGCCAGGCAACCTGTTAGGTGTCCAGTTTGGTaGGCTGTCCATTTGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: HALACGARFWGRQARQPVRCPVW*AVHLLL Trigger: AAGAAGCAAATGGACAGCCAACCAAACTGGACACCT...AACAGGTTGCCTGGCCTGCCTTCCCCAAAACCTCGCTCCACATGCTAGAGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | CAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGGAGGAGGTGTCCAGTTTGGTaGGCTGTCCATTTGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: QMEVELVPQLRGRAVQWRRCPVW*AVHLLL Trigger: AAGAAGCAAATGGACAGCCAACCAAACTGGACACCT...CCTCCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | GCCTCTTGTGCCAAGATGGCAGGGGGCCTAAGGTGCTATTGCTTTAGGGGCCCAAGCATTGGCTTCATTTaGGATGATGCAGCGAACAAT | + |
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Preference number: 5 (lower is better) Translates to: ASCAKMAGGLRCYCFRGPSIGFI*DDAANN Trigger: ATTGTTCGCTGCATCATCCAAAATGAAGCCAATGCT...TGGGCCCCTAAAGCAATAGCACCTTAGGCCCCCTGCCATCTTGGCACAAGAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000177058.8 |
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| CDS-3UTR CAA 90 bp | AGTTCTGCAGAGGTTCCAGGGGTCCCCTCAAGTGTACAAGGGACGAGGCTGGCACTCGGAATCTTCATTTaGGATGATGCAGCGAACAAT | + |
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Preference number: 5 (lower is better) Translates to: SSAEVPGVPSSVQGTRLALGIFI*DDAANN Trigger: ATTGTTCGCTGCATCATCCAAAATGAAGATTCCGAG...TGCCAGCCTCGTCCCTTGTACACTTGAGGGGACCCCTGGAACCTCTGCAGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163128.9 |
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| CDS GCA 72 bp | GACCCTGACGGACAAGTGGGGGCCTCTTGCTGCGGCTaGAGTGGATGCAAGGAGCTGCAGAGCCAAGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: DPDGQVGASCCG*SGCKELQSQGA Trigger: TGCACCTTGGCTCTGCAGCTCCTTGCATCCACTGCAGCCGCAGCAAGAGGCCCCCACTTGTCCGTCAGGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000163591.9 ENSMUST00000168056.9 ENSMUST00000169498.3 ENSMUST00000176104.8 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS TCA 72 bp | GGTCTGGGACGGCTTTTTCCTTCCTTAGAGCGACCCTaGCGGACAAGTGGGGGCCTCTTGCTGCGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GLGRLFPSLERP*RTSGGLLLRLQ Trigger: CTGCAGCCGCAGCAAGAGGCCCCCACTTGTCCGTCAGGGTCGCTCTAAGGAAGGAAAAAGCCGTCCCAGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000163591.9 ENSMUST00000168056.9 ENSMUST00000169498.3 ENSMUST00000176104.8 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS CCA 72 bp | GCTTTTTCCTTCCTTAGAGCGACCCTGACGGACAAGTaGGGGCCTCTTGCTGCGGCTGCAGTGGATGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: AFSFLRATLTDK*GPLAAAAVDAR Trigger: CCTTGCATCCACTGCAGCCGCAGCAAGAGGCCCCCACTTGTCCGTCAGGGTCGCTCTAAGGAAGGAAAAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000163591.9 ENSMUST00000168056.9 ENSMUST00000169498.3 ENSMUST00000176104.8 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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| CDS TCA 72 bp | GCGCTTCTCAATGTGTGTTACTCGGAATCTGCCCACTaGAAAAACAGTGGTCTCTCCAGGTCTGGGACGGCT | + |
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Preference number: 6 (lower is better) Translates to: ALLNVCYSESAH*KNSGLSRSGTA Trigger: AGCCGTCCCAGACCTGGAGAGACCACTGTTTTTTCAGTGGGCAGATTCCGAGTAACACACATTGAGAAGCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000070709.9 ENSMUST00000091932.12 ENSMUST00000163591.9 ENSMUST00000169498.3 ENSMUST00000176104.8 ENSMUST00000176902.8 ENSMUST00000177058.8 |
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