Pregenerated sensors for RELA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024927Ensembl transcript IDs: ENSMUST00000025867.6, ENSMUST00000237838.2, ENSMUST00000237863.2, ENSMUST00000238000.2
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGCCGCCGTAGCTGCATGGAGACTCGAACAGGAGCCTGGAGGCTaGGGTCGGCGTACGGAGGAGTCCGGAACACAATGGCCACTTGCC | + |
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Preference number: 1 (lower is better) Translates to: KAAVAAWRLEQEPGG*GRRTEESGTQWPLA Trigger: GGCAAGTGGCCATTGTGTTCCGGACTCCTCCGTACGCCGACCCCAGCCTCCAGGCTCCTGTTCGAGTCTCCATGCAGCTACGGCGGCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| 3UTR GCA 90 bp | GTGCTGTTGCCAAGCAAGGCCCCCAAGTCTTCATCAGCATCAAACTaGAGGTGCAGCAGGGCTTCCGACAGCGTGCCTTCCCCAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: VLLPSKAPKSSSASN*RCSRASDSVPSPAW Trigger: CCAGGCTGGGGAAGGCACGCTGTCGGAAGCCCTGCTGCACCTGCAGTTTGATGCTGATGAAGACTTGGGGGCCTTGCTTGGCAACAGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| 3UTR TCA 90 bp | GGCGATCATCTGTGTCTGGCAAGTACTGGAACTCCATGGGCTCACTaGGCTCGCGATCAGAAGGCCGCCGTAGCTGCATGGAGACTCGAA | + |
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Preference number: 1 (lower is better) Translates to: GDHLCLASTGTPWAH*ARDQKAAVAAWRLE Trigger: TTCGAGTCTCCATGCAGCTACGGCGGCCTTCTGATCGCGAGCTCAGTGAGCCCATGGAGTTCCAGTACTTGCCAGACACAGATGATCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| 3UTR CCA 90 bp | GCTCTTGGGAGCACTGCTTTGGATCAAGGTGTACAGGAATCCGCGTaGAGGAAGACACTTGATAGTAAGGCTATATGGCCTAAGGCCATG | + |
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Preference number: 1 (lower is better) Translates to: ALGSTALDQGVQESA*RKTLDSKAIWPKAM Trigger: CATGGCCTTAGGCCATATAGCCTTACTATCAAGTGTCTTCCTCCACGCGGATTCCTGTACACCTTGATCCAAAGCAGTGCTCCCAAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| 3UTR GCA 90 bp | AATAGCTTTTTCAGTAAAGGCTGTCTTGTGGCTGAGCATCTAGCCTaGCCTCCTGACTCTACAGTTTGCCCTGCTATTAAGGCACTTGAA | + |
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Preference number: 1 (lower is better) Translates to: NSFFSKGCLVAEHLA*PPDSTVCPAIKALE Trigger: TTCAAGTGCCTTAATAGCAGGGCAAACTGTAGAGTCAGGAGGGCAGGCTAGATGCTCAGCCACAAGACAGCCTTTACTGAAAAAGCTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGGTGCAGCAGGGCTTCCGACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTGCAGGAGCTGGGGGCTaGGCCAGAGGTACCATGGCT | + |
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Preference number: 2 (lower is better) Translates to: LQVQQGFRQRAFPSLGALAGAGG*ARGTMA Trigger: AGCCATGGTACCTCTGGCTCAGCCCCCAGCTCCTGC...AAGAGCACCCAGGCTGGGGAAGGCACGCTGTCGGAAGCCCTGCTGCACCTGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGACTCGAACAGGAGCCTGGAGGCTGGGGTCGGCGTACGGAGGAGTCCGGAATCCCGCACTGTCACCTaGAAGCAGAGGCGCACTGCA | + |
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Preference number: 2 (lower is better) Translates to: GDSNRSLEAGVGVRRSPESRTVT*KQRRTA Trigger: TGCAGTGCGCCTCTGCTTCCAGGTGACAGTGCGGGA...TTCCGGACTCCTCCGTACGCCGACCCCAGCCTCCAGGCTCCTGTTCGAGTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGTCTGTGAACACTCCTGGGTCTGTGCTGTTGCCAAGCAAGGCCCCCAAGGAGGGGCCTGCCTGCTaGGTCCCGCACTGTCACCTG | + |
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Preference number: 2 (lower is better) Translates to: ARSVNTPGSVLLPSKAPKEGPAC*VPHCHL Trigger: CAGGTGACAGTGCGGGACCCAGCAGGCAGGCCCCTC...CTTGGGGGCCTTGCTTGGCAACAGCACAGACCCAGGAGTGTTCACAGACCTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGGTGCAGCAGGGCTTCCGACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTCAGAGGTACCATGGCTaGGGAAGGGACCATGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LQVQQGFRQRAFPSLGALQRYHG*GRDHGL Trigger: CAGACCATGGTCCCTTCCTCAGCCATGGTACCTCTG...AAGAGCACCCAGGCTGGGGAAGGCACGCTGTCGGAAGCCCTGCTGCACCTGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGGAGCACACTCCCCAGAATGTGTACGCACTTCGGGAAGGCTTCAGTGCCGGGTCAGGGGGCCTCTaGGACCCTGTCACCAGGCGA | + |
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Preference number: 2 (lower is better) Translates to: QLEHTPQNVYALREGFSAGSGGL*DPVTRR Trigger: TCGCCTGGTGACAGGGTCCCAGAGGCCCCCTGACCC...GGCACTGAAGCCTTCCCGAAGTGCGTACACATTCTGGGGAGTGTGCTCCAGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTTGGAACAGGTGCAGACAGGGACAGAAAAGGAGCCTCGTaGCTCCCAGCCTGGTCCCGT | + |
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Preference number: 2 (lower is better) Translates to: DSVPSPAWVLFGTGADRDRKGAS*LPAWSR Trigger: ACGGGACCAGGCTGGGAGGCACGAGGCTCCTTTTCT...GTCCCTGTCTGCACCTGTTCCAAAGAGCACCCAGGCTGGGGAAGGCACGCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTTGGAACAGGTGCAGACAGGGACTGGTGCTGAGGGATGCTaGGAAGGTGTAGGGCTGCGG | + |
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Preference number: 2 (lower is better) Translates to: TACLPQPGCSLEQVQTGTGAEGC*EGVGLR Trigger: CCGCAGCCCTACACCTTCCCAGCATCCCTCAGCACC...AGTCCCTGTCTGCACCTGTTCCAAAGAGCACCCAGGCTGGGGAAGGCACGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCCGACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTTGGAACAGGTGCAGACAGGTCTGGGCAAGGACTaGGGCAGAGGACGGTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: LPTACLPQPGCSLEQVQTGLGKD*GRGRCQ Trigger: TTGGCACCGTCCTCTGCCCCAGTCCTTGCCCAGACC...TGTCTGCACCTGTTCCAAAGAGCACCCAGGCTGGGGAAGGCACGCTGTCGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGCAGGAGCTGGGGGCTaGGCCAGAGGTACCATGGCT | + |
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Preference number: 2 (lower is better) Translates to: QRDHPNKSGAAGAHSPECAGAGG*ARGTMA Trigger: AGCCATGGTACCTCTGGCTCAGCCCCCAGCTCCTGC...ACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTCTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCTGTGGAGTGAGACATGGACACACCCTGGTTCAGGAGCTGCTGAAACTCGGGCTTCCGACAGCGTaGCTTCCCCAGCCTGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LSCGVRHGHTLVQELLKLGLPTA*LPQPGC Trigger: GCACCCAGGCTGGGGAAGGCACGCTGTCGGAAGCCC...GAGTTTCAGCAGCTCCTGAACCAGGGTGTGTCCATGTCTCACTCCACAGCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGCCCTGAAACCTGGTGCTCTGAGCAGGGTCGCTGTCAGCACCTTAGGAGCTGGCTCAGCTGTGGAGTaGGACATGGACACACCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SALKPGALSRVAVSTLGAGSAVE*DMDTPW Trigger: CCAGGGTGTGTCCATGTCTCACTCCACAGCTGAGCC...AGCTCCTAAGGTGCTGACAGCGACCCTGCTCAGAGCACCAGGTTTCAGGGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCTCGCGATCAGAAGGCCGCCGTAGCTGCATGGAGACTCGAACAGGAGCCCGATGCACATCAGCTTaGGAAAAGGAGCCTCGTGCC | + |
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Preference number: 2 (lower is better) Translates to: LSSRSEGRRSCMETRTGARCTSA*EKEPRA Trigger: GGCACGAGGCTCCTTTTCTCAAGCTGATGTGCATCG...GGCTCCTGTTCGAGTCTCCATGCAGCTACGGCGGCCTTCTGATCGCGAGCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGGAGCACACTCCCCAGAATGTGTACGCACTTCGGGAAGGCTTCAGTGCCCCCACCTGTTCCCCTTaGCCACAGCTCAGCATGGAG | + |
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Preference number: 2 (lower is better) Translates to: QLEHTPQNVYALREGFSAPTCSP*PQLSME Trigger: CTCCATGCTGAGCTGTGGCCAAGGGGAACAGGTGGG...GGCACTGAAGCCTTCCCGAAGTGCGTACACATTCTGGGGAGTGTGCTCCAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| 3UTR-3UTR CCA 90 bp | CGGTGGCGATCATCTGTGTCTGGCAAGTACTGGAACTCCATGGGCTCACTGAGCGGTGCTGAGGGATGCTaGGAAGGTGTAGGGCTGCGG | + |
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Preference number: 2 (lower is better) Translates to: RWRSSVSGKYWNSMGSLSGAEGC*EGVGLR Trigger: CCGCAGCCCTACACCTTCCCAGCATCCCTCAGCACC...GCTCAGTGAGCCCATGGAGTTCCAGTACTTGCCAGACACAGATGATCGCCACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGGGCTTCCGACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTTGGAACAGGTGGTTCAGGAGCTGCTaGAACTCTGAGTTGTCCACA | + |
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Preference number: 2 (lower is better) Translates to: QQGFRQRAFPSLGALWNRWFRSC*NSELST Trigger: TGTGGACAACTCAGAGTTTCAGCAGCTCCTGAACCA...CCTGTTCCAAAGAGCACCCAGGCTGGGGAAGGCACGCTGTCGGAAGCCCTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| 3UTR-3UTR GCA 90 bp | GATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGCGCATCAAACTGCAGGTaGAGCAGGGCTTCCGACAGC | + |
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Preference number: 2 (lower is better) Translates to: DHPNKSGAAGAHSPECVRASNCR*SRASDS Trigger: GCTGTCGGAAGCCCTGCTGCACCTGCAGTTTGATGC...GCGTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGGAGCACACTCCCCAGAATGTGTACGCACTTCGGGAAGGCTTCAGTGCCACACTCCTGGGTCTGTaGTGTTGCCAAGCAAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: QLEHTPQNVYALREGFSATLLGL*CCQARP Trigger: GGGCCTTGCTTGGCAACAGCACAGACCCAGGAGTGT...GGCACTGAAGCCTTCCCGAAGTGCGTACACATTCTGGGGAGTGTGCTCCAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
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| 3UTR CAA 90 bp | CGGAGGAGTCCGGAACACAATGGCCACTTGCCGATGCACATCAGCTaGAGAAAAGGAGCCTCGTGCCTCCCAGCCTGGTCCCGTGAAATA | + |
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Preference number: 2 (lower is better) Translates to: RRSPEHNGHLPMHIS*RKGASCLPAWSREI Trigger: TATTTCACGGGACCAGGCTGGGAGGCACGAGGCTCCTTTTCTCAAGCTGATGTGCATCGGCAAGTGGCCATTGTGTTCCGGACTCCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGGCACAGCAATACGCCGGGTTGGAGGCCGGGGTTCAGTTGGTCCATTGAAATTACTCGGCAGATCTTaGGCTCGGCAGTGTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: VGTAIRRVGGRGSVGPLKLLGRS*ARQCWG Trigger: CCCCCAACACTGCCGAGCTCAAGATCTGCCGAGTAA...TTTCAATGGACCAACTGAACCCCGGCCTCCAACCCGGCGTATTGCTGTGCCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| 3UTR-3UTR CCA 90 bp | GATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGCTATGGCCTAAGGCCATaGCTCCAGTCTGTCCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: DHPNKSGAAGAHSPECVRYGLRP*LQSVPL Trigger: GAGAGGGACAGACTGGAGCCATGGCCTTAGGCCATA...GCGTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGCCAAGGCCAGGGCCTaGTTTGAGATCTGCCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: QRDHPNKSGAAGAHSPECAKARA*FEICPD Trigger: ATCAGGGCAGATCTCAAACCAGGCCCTGGCCTTGGC...ACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGTTGCCAAGCAAGGCCCCCAAGTCTTCATCAGCATCAAACTGCAGGTGCAGCTGAGGAAGGGACCATaGTCTGGGCAAGGACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: AVAKQGPQVFISIKLQVQLRKGP*SGQGLG Trigger: CCCCAGTCCTTGCCCAGACCATGGTCCCTTCCTCAG...CTGCACCTGCAGTTTGATGCTGATGAAGACTTGGGGGCCTTGCTTGGCAACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGAGTGAGACATGGACACACCCTGGTTCAGGAGCTGCTGAAACTCTGAGTGGTGCAGACAGGGACTaGGGAGGACCCGGGGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: LWSETWTHPGSGAAETLSGADRD*GGPGVR Trigger: TCTAACCCCGGGTCCTCCCCAGTCCCTGTCTGCACC...ACTCAGAGTTTCAGCAGCTCCTGAACCAGGGTGTGTCCATGTCTCACTCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| 3UTR-3UTR CCA 90 bp | GATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGCGCATGGGCTCAGCTGTaGAGTGAGACATGGACACAC | + |
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Preference number: 2 (lower is better) Translates to: DHPNKSGAAGAHSPECVRAWAQL*SETWTH Trigger: GTGTGTCCATGTCTCACTCCACAGCTGAGCCCATGC...GCGTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGCCCTGAAACCTGGTGCTCTGAGCAGGGTCGCTGTCAGCACCTTAGGAGCTGGTACTCCATCAGCATaGGCTCAGCTGTGGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SALKPGALSRVAVSTLGAGTPSA*AQLWSE Trigger: CTCACTCCACAGCTGAGCCCATGCTGATGGAGTACC...AGCTCCTAAGGTGCTGACAGCGACCCTGCTCAGAGCACCAGGTTTCAGGGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
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| 3UTR CAA 90 bp | GGTGTCGGGCAGCACCACGTAGGAGCTGCTCTTGGGAGCACTGCTTaGGATCAAGGTGTACAGGAATCCGCGTGGAGGAAGACACTTGAT | + |
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Preference number: 2 (lower is better) Translates to: GVGQHHVGAALGSTA*DQGVQESAWRKTLD Trigger: ATCAAGTGTCTTCCTCCACGCGGATTCCTGTACACCTTGATCCAAAGCAGTGCTCCCAAGAGCAGCTCCTACGTGGTGCTGCCCGACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| 3UTR-3UTR TCA 90 bp | TTGTCCACAGATGCCAGGTCTGTGAACACTCCTGGGTCTGTGCTGTTGCCAAGCCAGAGGTACCATGGCTaGGGAAGGGACCATGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LSTDARSVNTPGSVLLPSQRYHG*GRDHGL Trigger: CAGACCATGGTCCCTTCCTCAGCCATGGTACCTCTG...GCTTGGCAACAGCACAGACCCAGGAGTGTTCACAGACCTGGCATCTGTGGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGGAGCTGCTGAAACTCTaGGTTGTCCACAGATGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PERSPKQVGGSWSTLPRMELLKL*VVHRCQ Trigger: CTGGCATCTGTGGACAACTCAGAGTTTCAGCAGCTC...CATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTCTCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCTGTGGAGTGAGACATGGACACACCCTGGTTCAGGAGCTGCTGAAACTCCTGGGTCTGTGCTGTTaGCAAGCAAGGCCCCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: LSCGVRHGHTLVQELLKLLGLCC*QARPPS Trigger: ACTTGGGGGCCTTGCTTGGCAACAGCACAGACCCAG...GAGTTTCAGCAGCTCCTGAACCAGGGTGTGTCCATGTCTCACTCCACAGCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGTTGAGTTTCGGGTAGGCACAGCAATACGCCGGGTTGGAGGCCGGGGTGTCTGTGAACACTCCTaGGTCTGTGCTGTTGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: TEVEFRVGTAIRRVGGRGVCEHS*VCAVAK Trigger: CTTGGCAACAGCACAGACCCAGGAGTGTTCACAGAC...ACCCCGGCCTCCAACCCGGCGTATTGCTGTGCCTACCCGAAACTCAACTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAATCCGGTGGCGATCATCTGTGTCTGGCAAGTACTGGAACTCCATGGGCTCCTTCCCCAGCCTGGGTaGTCTTTGGAACAGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: FNPVAIICVWQVLELHGLLPQPG*SLEQVQ Trigger: CTGCACCTGTTCCAAAGAGCACCCAGGCTGGGGAAG...GAGCCCATGGAGTTCCAGTACTTGCCAGACACAGATGATCGCCACCGGATTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTTGGAACAGGTGCAGACAGGGACTCAATGTCTTCTTTCTaGACCTTGTCGCACAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: DSVPSPAWVLFGTGADRDSMSSF*TLSHSK Trigger: CTTGCTGTGCGACAAGGTGCAGAAAGAAGACATTGA...GTCCCTGTCTGCACCTGTTCCAAAGAGCACCCAGGCTGGGGAAGGCACGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| 3UTR-3UTR CCA 90 bp | ACATGGACACACCCTGGTTCAGGAGCTGCTGAAACTCTGAGTTGTCCACAGATGCTGAGGAAGGGACCATaGTCTGGGCAAGGACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: TWTHPGSGAAETLSCPQMLRKGP*SGQGLG Trigger: CCCCAGTCCTTGCCCAGACCATGGTCCCTTCCTCAG...CATCTGTGGACAACTCAGAGTTTCAGCAGCTCCTGAACCAGGGTGTGTCCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| 3UTR-3UTR CCA 90 bp | GAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGTCTGTGAACACTCCTaGGTCTGTGCTGTTGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: EITQTSRGQLEHTPQNVYVCEHS*VCAVAK Trigger: CTTGGCAACAGCACAGACCCAGGAGTGTTCACAGAC...GTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
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| 3UTR CAA 90 bp | TTGTCCACAGATGCCAGGTCTGTGAACACTCCTGGGTCTGTGCTGTaGCCAAGCAAGGCCCCCAAGTCTTCATCAGCATCAAACTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LSTDARSVNTPGSVL*PSKAPKSSSASNCR Trigger: CCTGCAGTTTGATGCTGATGAAGACTTGGGGGCCTTGCTTGGCAACAGCACAGACCCAGGAGTGTTCACAGACCTGGCATCTGTGGACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| 3UTR-3UTR GCA 90 bp | CGGGTTGGAGGCCGGGGTTCAGTTGGTCCATTGAAAGGACTCTTCTTCATGATAGCATCAAACTGCAGGTaGAGCAGGGCTTCCGACAGC | + |
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Preference number: 2 (lower is better) Translates to: RVGGRGSVGPLKGLFFMIASNCR*SRASDS Trigger: GCTGTCGGAAGCCCTGCTGCACCTGCAGTTTGATGC...TATCATGAAGAAGAGTCCTTTCAATGGACCAACTGAACCCCGGCCTCCAACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGGTACAGGAATCCGCGTaGAGGAAGACACTTGATAGT | + |
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Preference number: 2 (lower is better) Translates to: PERSPKQVGGSWSTLPRMVQESA*RKTLDS Trigger: ACTATCAAGTGTCTTCCTCCACGCGGATTCCTGTAC...CATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTCTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| 3UTR-3UTR CCA 90 bp | CGGGTTGGAGGCCGGGGTTCAGTTGGTCCATTGAAAGGACTCTTCTTCATGATAGAGCCAGAGGTACCATaGCTGAGGAAGGGACCATGG | + |
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Preference number: 2 (lower is better) Translates to: RVGGRGSVGPLKGLFFMIEPEVP*LRKGPW Trigger: CCATGGTCCCTTCCTCAGCCATGGTACCTCTGGCTC...TATCATGAAGAAGAGTCCTTTCAATGGACCAACTGAACCCCGGCCTCCAACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGCTGTGGAGTGAGACATGGACACACCCTGGTTCAGGAGCTGCTGAAACTCTGGTTCAGGAGCTGCTaGAACTCTGAGTTGTCCACA | + |
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Preference number: 2 (lower is better) Translates to: LSCGVRHGHTLVQELLKLWFRSC*NSELST Trigger: TGTGGACAACTCAGAGTTTCAGCAGCTCCTGAACCA...GAGTTTCAGCAGCTCCTGAACCAGGGTGTGTCCATGTCTCACTCCACAGCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAGGTCTCATAGGTCCTTTTGCGCTTCTCTTCAATCCGGTGGCGATCATCTCGTGCCTCCCAGCCTaGTCCCGTGAAATACACCTC | + |
|
Preference number: 2 (lower is better) Translates to: LEGLIGPFALLFNPVAIISCLPA*SREIHL Trigger: GAGGTGTATTTCACGGGACCAGGCTGGGAGGCACGA...GATGATCGCCACCGGATTGAAGAGAAGCGCAAAAGGACCTATGAGACCTTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGCTGTTGCCAAGCAAGGCCCCCAAGTCTTCATCAGCATCAAACTGCAGGTGAGTCCGGAACACAATaGCCACTTGCCGATGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: LCCCQARPPSLHQHQTAGESGTQ*PLADAH Trigger: ATGTGCATCGGCAAGTGGCCATTGTGTTCCGGACTC...ACCTGCAGTTTGATGCTGATGAAGACTTGGGGGCCTTGCTTGGCAACAGCACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGCCGGGGTTCAGTTGGTCCATTGAAAGGACTCTTCTTCATGATACTCTTGAAGAAGGCCGCCGTAGCTaGATGGAGACTCGAACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: RPGFSWSIERTLLHDTLEEGRRS*METRTG Trigger: TCCTGTTCGAGTCTCCATGCAGCTACGGCGGCCTTC...TTCAAGAGTATCATGAAGAAGAGTCCTTTCAATGGACCAACTGAACCCCGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTTGCCAAGCAAGGCCCCCAAGTCTTCATCAGCATCAAACTGCAGGTGCAGCTGATGGTAACAGCATaGGGGAAAACTCATCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: AVAKQGPQVFISIKLQVQLMVTA*GKTHQS Trigger: ACTTTGATGAGTTTTCCCCCATGCTGTTACCATCAG...CTGCACCTGCAGTTTGATGCTGATGAAGACTTGGGGGCCTTGCTTGGCAACAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
||
| 3UTR CCA 72 bp | GCTGAGCCAGAGGTACCATGGCTGAGGAAGGGACCATaGTCTGGGCAAGGACTGGGGCAGAGGACGGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AEPEVPWLRKGP*SGQGLGQRTVP Trigger: TGGCACCGTCCTCTGCCCCAGTCCTTGCCCAGACCATGGTCCCTTCCTCAGCCATGGTACCTCTGGCTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
||
| 3UTR CCA 72 bp | GCCTGGGTGCTCTTTGGAACAGGTGCAGACAGGGACTaGGGAGGACCCGGGGTTAGAACTGGGGCAGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AWVLFGTGADRD*GGPGVRTGAGA Trigger: AGCTCCTGCCCCAGTTCTAACCCCGGGTCCTCCCCAGTCCCTGTCTGCACCTGTTCCAAAGAGCACCCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
||
| 3UTR CCA 72 bp | GTAGCTGCATGGAGACTCGAACAGGAGCCTGGAGGCTaGGGTCGGCGTACGGAGGAGTCCGGAACACAATGG | + |
|
Preference number: 3 (lower is better) Translates to: VAAWRLEQEPGG*GRRTEESGTQW Trigger: CCATTGTGTTCCGGACTCCTCCGTACGCCGACCCCAGCCTCCAGGCTCCTGTTCGAGTCTCCATGCAGCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTTGGAACAGGTGCAGACAGGGACTCAGCCTGGGTGCTCTTaGGAACAGGTGCAGACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TACLPQPGCSLEQVQTGTQPGCS*EQVQTG Trigger: CCCTGTCTGCACCTGTTCCAAAGAGCACCCAGGCTG...AGTCCCTGTCTGCACCTGTTCCAAAGAGCACCCAGGCTGGGGAAGGCACGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
||
| 3UTR GCA 72 bp | CGCACTTCGGGAAGGCTTCAGTGCCCTGAAACCTGGTaGTCTGAGCAGGGTCGCTGTCAGCACCTTAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RTSGRLQCPETW*SEQGRCQHLRS Trigger: GCTCCTAAGGTGCTGACAGCGACCCTGCTCAGAGCACCAGGTTTCAGGGCACTGAAGCCTTCCCGAAGTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| 3UTR TCA 72 bp | CTGTGTCTGGCAAGTACTGGAACTCCATGGGCTCACTaGGCTCGCGATCAGAAGGCCGCCGTAGCTGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: LCLASTGTPWAH*ARDQKAAVAAW Trigger: CCATGCAGCTACGGCGGCCTTCTGATCGCGAGCTCAGTGAGCCCATGGAGTTCCAGTACTTGCCAGACACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| 3UTR CCA 72 bp | GTACGCACTTCGGGAAGGCTTCAGTGCCCTGAAACCTaGTGCTCTGAGCAGGGTCGCTGTCAGCACCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: VRTSGRLQCPET*CSEQGRCQHLR Trigger: CCTAAGGTGCTGACAGCGACCCTGCTCAGAGCACCAGGTTTCAGGGCACTGAAGCCTTCCCGAAGTGCGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| 3UTR GCA 72 bp | TCCCCAGAATGTGTACGCACTTCGGGAAGGCTTCAGTaGCCTGAAACCTGGTGCTCTGAGCAGGGTCGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SPECVRTSGRLQ*PETWCSEQGRC Trigger: ACAGCGACCCTGCTCAGAGCACCAGGTTTCAGGGCACTGAAGCCTTCCCGAAGTGCGTACACATTCTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| 3UTR TCA 72 bp | GGCAGCTCCCAGAGTTCCGGTTTACTCGGCAGATCTTaGGCTCGGCAGTGTTGGGGGCCCGGTTATCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSSQSSGLLGRS*ARQCWGPGYQK Trigger: TTTTTGATAACCGGGCCCCCAACACTGCCGAGCTCAAGATCTGCCGAGTAAACCGGAACTCTGGGAGCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| 3UTR GCA 72 bp | GAGGACGGTGCCAAGGCCAGGGCCTGGTTTGAGATCTaGCCTGATGGTAACAGCATGGGGGAAAACTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: EDGAKARAWFEI*PDGNSMGENSS Trigger: TGATGAGTTTTCCCCCATGCTGTTACCATCAGGGCAGATCTCAAACCAGGCCCTGGCCTTGGCACCGTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGCTGTTGCCAAGCAAGGCCCCCAAGTCTTCATCAGCATCAAACTGCAGGTTTTACTCGGCAGATCTaGAGCTCGGCAGTGTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LCCCQARPPSLHQHQTAGFTRQI*SSAVLG Trigger: CCCCAACACTGCCGAGCTCAAGATCTGCCGAGTAAA...ACCTGCAGTTTGATGCTGATGAAGACTTGGGGGCCTTGCTTGGCAACAGCACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAATCCGGTGGCGATCATCTGTGTCTGGCAAGTACTGGAACTCCATGGGCTCCCGATGCACATCAGCTaGAGAAAAGGAGCCTCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: FNPVAIICVWQVLELHGLPMHIS*RKGASC Trigger: GCACGAGGCTCCTTTTCTCAAGCTGATGTGCATCGG...GAGCCCATGGAGTTCCAGTACTTGCCAGACACAGATGATCGCCACCGGATTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| 3UTR GCA 72 bp | TTGCCGATGCACATCAGCTTGAGAAAAGGAGCCTCGTaGCTCCCAGCCTGGTCCCGTGAAATACACCTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LPMHISLRKGAS*LPAWSREIHLN Trigger: ATTGAGGTGTATTTCACGGGACCAGGCTGGGAGGCACGAGGCTCCTTTTCTCAAGCTGATGTGCATCGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| 3UTR CCA 72 bp | TCAATCCGGTGGCGATCATCTGTGTCTGGCAAGTACTaGAACTCCATGGGCTCACTGAGCTCGCGATCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SIRWRSSVSGKY*NSMGSLSSRSE Trigger: TTCTGATCGCGAGCTCAGTGAGCCCATGGAGTTCCAGTACTTGCCAGACACAGATGATCGCCACCGGATTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGAAAACTCATCAAAGTaGATGGTGCTGAGGGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: EITQTSRGQLEHTPQNVYENSSK*MVLRDA Trigger: AGCATCCCTCAGCACCATCAACTTTGATGAGTTTTC...GTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| 3UTR GCA 72 bp | TTCAGTAAAGGCTGTCTTGTGGCTGAGCATCTAGCCTaGCCTCCTGACTCTACAGTTTGCCCTGCTATTAAG | + |
|
Preference number: 3 (lower is better) Translates to: FSKGCLVAEHLA*PPDSTVCPAIK Trigger: CTTAATAGCAGGGCAAACTGTAGAGTCAGGAGGGCAGGCTAGATGCTCAGCCACAAGACAGCCTTTACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| 3UTR CCA 72 bp | AGCACTGCTTTGGATCAAGGTGTACAGGAATCCGCGTaGAGGAAGACACTTGATAGTAAGGCTATATGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: STALDQGVQESA*RKTLDSKAIWP Trigger: AGGCCATATAGCCTTACTATCAAGTGTCTTCCTCCACGCGGATTCCTGTACACCTTGATCCAAAGCAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR TCA 90 bp | CTGCAGGTGCAGCAGGGCTTCCGACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTTTACTCGGCAGATCTTaGGCTCGGCAGTGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQVQQGFRQRAFPSLGALLLGRS*ARQCWG Trigger: CCCCCAACACTGCCGAGCTCAAGATCTGCCGAGTAA...AAGAGCACCCAGGCTGGGGAAGGCACGCTGTCGGAAGCCCTGCTGCACCTGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGCCGCCGTAGCTGCATGGAGACTCGAACAGGAGCCTGGAGGCTGGGGTCGATGAGGCCGGTGAGGTaGATCCTTGGTGACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGRRSCMETRTGAWRLGSMRPVR*ILGDQG Trigger: TCCCTGGTCACCAAGGATCCACCTCACCGGCCTCAT...CGACCCCAGCCTCCAGGCTCCTGTTCGAGTCTCCATGCAGCTACGGCGGCCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| CDS-3UTR CCA 90 bp | GATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGCGAGGGGCCTGCCTGCTaGGTCCCGCACTGTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: DHPNKSGAAGAHSPECVREGPAC*VPHCHL Trigger: CAGGTGACAGTGCGGGACCCAGCAGGCAGGCCCCTC...GCGTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | CACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGCACTGGGTCAGGGGGCCTCTaGGACCCTGTCACCAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HPNKSGAAGAHSPECVRTGSGGL*DPVTRR Trigger: TCGCCTGGTGACAGGGTCCCAGAGGCCCCCTGACCC...AGTGCGTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR TCA 90 bp | TACCGAAGCAGGAGCTATCAACACAGGGATGCACCGAGTCCTCCCAGCTCCGTCGCAGGAGCTGGGGGCTaGGCCAGAGGTACCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YRSRSYQHRDAPSPPSSVAGAGG*ARGTMA Trigger: AGCCATGGTACCTCTGGCTCAGCCCCCAGCTCCTGC...GACGGAGCTGGGAGGACTCGGTGCATCCCTGTGTTGATAGCTCCTGCTTCGGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR GCA 90 bp | GTACGCACTTCGGGAAGGCTTCAGTGCCCTGAAACCTGGTGCTCTGAGCAGGGTTGGGGCAGAGGACGGTaGCAAGGCCAGGGCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VRTSGRLQCPETWCSEQGWGRGR*QGQGLV Trigger: AACCAGGCCCTGGCCTTGGCACCGTCCTCTGCCCCA...ACCCTGCTCAGAGCACCAGGTTTCAGGGCACTGAAGCCTTCCCGAAGTGCGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR TCA 90 bp | GAAGGCCGCCGTAGCTGCATGGAGACTCGAACAGGAGCCTGGAGGCTGGGGTCGGCTCTGAGGGAAAGATaGGGGGAAACAGATCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGRRSCMETRTGAWRLGSALRER*GETDRP Trigger: TGGACGATCTGTTTCCCCTCATCTTTCCCTCAGAGC...CGACCCCAGCCTCCAGGCTCCTGTTCGAGTCTCCATGCAGCTACGGCGGCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTTCTCGCCAGGAATACTaGCCGCTGAGCGCCCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QRDHPNKSGAAGAHSPECSRQEY*PLSAPR Trigger: GCGAGGGGCGCTCAGCGGGCAGTATTCCTGGCGAGA...ACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTCTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | GACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTTGGAACAGGTGCAGACAGGGACATGAGGCCGGTGAGGTaGATCCTTGGTGACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSVPSPAWVLFGTGADRDMRPVR*ILGDQG Trigger: TCCCTGGTCACCAAGGATCCACCTCACCGGCCTCAT...GTCCCTGTCTGCACCTGTTCCAAAGAGCACCCAGGCTGGGGAAGGCACGCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTTGCCAAGCAAGGCCCCCAAGTCTTCATCAGCATCAAACTGCAGGTGCAGGAGGGGCCTGCCTGCTaGGTCCCGCACTGTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVAKQGPQVFISIKLQVQEGPAC*VPHCHL Trigger: CAGGTGACAGTGCGGGACCCAGCAGGCAGGCCCCTC...CTGCACCTGCAGTTTGATGCTGATGAAGACTTGGGGGCCTTGCTTGGCAACAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | CGGGCAGCACCACGTAGGAGCTGCTCTTGGGAGCACTGCTTTGGATCAAGGTGTGGTCTGGGCAAGGACTaGGGCAGAGGACGGTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RAAPRRSCSWEHCFGSRCGLGKD*GRGRCQ Trigger: TTGGCACCGTCCTCTGCCCCAGTCCTTGCCCAGACC...ACACCTTGATCCAAAGCAGTGCTCCCAAGAGCAGCTCCTACGTGGTGCTGCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | GGATGCACCGAGTCCTCCCAGCTCCGTCTCCAGGAGGTTAATGCTCCTGCGAAAGGTGCAGACAGGGACTaGGGAGGACCCGGGGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GCTESSQLRLQEVNAPAKGADRD*GGPGVR Trigger: TCTAACCCCGGGTCCTCCCCAGTCCCTGTCTGCACC...TTTCGCAGGAGCATTAACCTCCTGGAGACGGAGCTGGGAGGACTCGGTGCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR GCA 90 bp | CAGCTGGAGCACACTCCCCAGAATGTGTACGCACTTCGGGAAGGCTTCAGTGCCAGAAAAGGAGCCTCGTaGCTCCCAGCCTGGTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QLEHTPQNVYALREGFSARKGAS*LPAWSR Trigger: ACGGGACCAGGCTGGGAGGCACGAGGCTCCTTTTCT...GGCACTGAAGCCTTCCCGAAGTGCGTACACATTCTGGGGAGTGTGCTCCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| CDS-3UTR GCA 90 bp | ATCTCAGAGTTCCCTACCGAAGCAGGAGCTATCAACACAGGGATGCACCGAGTCGGGCTTCCGACAGCGTaGCTTCCCCAGCCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISEFPTEAGAINTGMHRVGLPTA*LPQPGC Trigger: GCACCCAGGCTGGGGAAGGCACGCTGTCGGAAGCCC...GACTCGGTGCATCCCTGTGTTGATAGCTCCTGCTTCGGTAGGGAACTCTGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | CACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGCACTTCCCGCACTGTCACCTaGAAGCAGAGGCGCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HPNKSGAAGAHSPECVRTSRTVT*KQRRTA Trigger: TGCAGTGCGCCTCTGCTTCCAGGTGACAGTGCGGGA...AGTGCGTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGCTTCAGTGCCCTGAAACCTGGTGCTCTGAGCAGGGTCGCTGTCAGCACTCGTGCCTCCCAGCCTaGTCCCGTGAAATACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRLQCPETWCSEQGRCQHSCLPA*SREIHL Trigger: GAGGTGTATTTCACGGGACCAGGCTGGGAGGCACGA...GTGCTGACAGCGACCCTGCTCAGAGCACCAGGTTTCAGGGCACTGAAGCCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGCTTCAGTGCCCTGAAACCTGGTGCTCTGAGCAGGGTCGCTGTCAGCACGCTGCGGGGCTGGCTTaGGGACAGAAGTTGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRLQCPETWCSEQGRCQHAAGLA*GQKLSF Trigger: GAAACTCAACTTCTGTCCCCAAGCCAGCCCCGCAGC...GTGCTGACAGCGACCCTGCTCAGAGCACCAGGTTTCAGGGCACTGAAGCCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| 3UTR CAA 72 bp | CCGGAACACAATGGCCACTTGCCGATGCACATCAGCTaGAGAAAAGGAGCCTCGTGCCTCCCAGCCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PEHNGHLPMHIS*RKGASCLPAWS Trigger: GGACCAGGCTGGGAGGCACGAGGCTCCTTTTCTCAAGCTGATGTGCATCGGCAAGTGGCCATTGTGTTCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTCCGACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTTGGAACAGGTGCAGAGCTCTGAGGGAAAGATaGGGGGAAACAGATCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFRQRAFPSLGALWNRCRALRER*GETDRP Trigger: TGGACGATCTGTTTCCCCTCATCTTTCCCTCAGAGC...TCTGCACCTGTTCCAAAGAGCACCCAGGCTGGGGAAGGCACGCTGTCGGAAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCTGGAGCACACTCCCCAGAATGTGTACGCACTTCGGGAAGGCTTCAGTGCAGCCTGGGCTGGCTCTaGGGGAAAGATGAGGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AAGAHSPECVRTSGRLQCSLGWL*GKDEGK Trigger: TTTCCCCTCATCTTTCCCTCAGAGCCAGCCCAGGCT...GCACTGAAGCCTTCCCGAAGTGCGTACACATTCTGGGGAGTGTGCTCCAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| CDS-3UTR TCA 90 bp | GATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGCTTACTCGGCAGATCTTaGGCTCGGCAGTGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DHPNKSGAAGAHSPECVRLLGRS*ARQCWG Trigger: CCCCCAACACTGCCGAGCTCAAGATCTGCCGAGTAA...GCGTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTTGGAACAGGTGCAGACAGGGACTCGATGCACATCAGCTTaGGAAAAGGAGCCTCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TACLPQPGCSLEQVQTGTRCTSA*EKEPRA Trigger: GGCACGAGGCTCCTTTTCTCAAGCTGATGTGCATCG...AGTCCCTGTCTGCACCTGTTCCAAAGAGCACCCAGGCTGGGGAAGGCACGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTACTCCATGGGCTCACTaGGCTCGCGATCAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRDHPNKSGAAGAHSPECTPWAH*ARDQKA Trigger: GGCCTTCTGATCGCGAGCTCAGTGAGCCCATGGAGT...ACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTCTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| CDS-3UTR TCA 90 bp | TGGTGTCGGGCAGCACCACGTAGGAGCTGCTCTTGGGAGCACTGCTTTGGATCACAGAGGTACCATGGCTaGGGAAGGGACCATGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WCRAAPRRSCSWEHCFGSQRYHG*GRDHGL Trigger: CAGACCATGGTCCCTTCCTCAGCCATGGTACCTCTG...TGATCCAAAGCAGTGCTCCCAAGAGCAGCTCCTACGTGGTGCTGCCCGACACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR TCA 90 bp | GAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGGCTCAGCTGTGGAGTaGGACATGGACACACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EITQTSRGQLEHTPQNVYGSAVE*DMDTPW Trigger: CCAGGGTGTGTCCATGTCTCACTCCACAGCTGAGCC...GTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR GCA 90 bp | TACCGAAGCAGGAGCTATCAACACAGGGATGCACCGAGTCCTCCCAGCTCCGTCGCATCAAACTGCAGGTaGAGCAGGGCTTCCGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: YRSRSYQHRDAPSPPSSVASNCR*SRASDS Trigger: GCTGTCGGAAGCCCTGCTGCACCTGCAGTTTGATGC...GACGGAGCTGGGAGGACTCGGTGCATCCCTGTGTTGATAGCTCCTGCTTCGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR GCA 90 bp | GATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGCCTGGGTCTGTGCTGTTaGCAAGCAAGGCCCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DHPNKSGAAGAHSPECVRLGLCC*QARPPS Trigger: ACTTGGGGGCCTTGCTTGGCAACAGCACAGACCCAG...GCGTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | AACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGCACTTCGGGATCGTGCCTCCCAGCCTaGTCCCGTGAAATACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: NKSGAAGAHSPECVRTSGSCLPA*SREIHL Trigger: GAGGTGTATTTCACGGGACCAGGCTGGGAGGCACGA...TCCCGAAGTGCGTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGAAGGGACCATGGTCTaGGCAAGGACTGGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRDHPNKSGAAGAHSPECEGTMV*ARTGAE Trigger: CTCTGCCCCAGTCCTTGCCCAGACCATGGTCCCTTC...ACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTCTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR TCA 90 bp | CCGGTTTACTCGGCAGATCTTGAGCTCGGCAGTGTTGGGGGCCCGGTTATCAAAAGCCTGGGCTGGCTCTaGGGGAAAGATGAGGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PVYSADLELGSVGGPVIKSLGWL*GKDEGK Trigger: TTTCCCCTCATCTTTCCCTCAGAGCCAGCCCAGGCT...TTTGATAACCGGGCCCCCAACACTGCCGAGCTCAAGATCTGCCGAGTAAACCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTACCGAAGCAGGAGCTATCAACACAGGGATGCACCGAGTCCTCCCAGCTCCGATGCACATCAGCTTaGGAAAAGGAGCCTCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPKQELSTQGCTESSQLRCTSA*EKEPRA Trigger: GGCACGAGGCTCCTTTTCTCAAGCTGATGTGCATCG...GAGCTGGGAGGACTCGGTGCATCCCTGTGTTGATAGCTCCTGCTTCGGTAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR TCA 90 bp | AACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGCACTTCGGGACTTGGGGACAGAAGTTaGGTTTCGGGTAGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NKSGAAGAHSPECVRTSGLGDRS*VSGRHS Trigger: GCTGTGCCTACCCGAAACTCAACTTCTGTCCCCAAG...TCCCGAAGTGCGTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| CDS-3UTR TCA 90 bp | CACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGCACTCTTGGGGACAGAAGTTaGGTTTCGGGTAGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPNKSGAAGAHSPECVRTLGDRS*VSGRHS Trigger: GCTGTGCCTACCCGAAACTCAACTTCTGTCCCCAAG...AGTGCGTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGGCTTCAGTGCCCTGAAACCTGGTGCTCTGAGCAGGGTCGCTGTCAGCACGAAGTCTTCATCTCCTaGGAGACCATTGGGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRLQCPETWCSEQGRCQHEVFIS*ETIGKP Trigger: GGGCTTCCCAATGGTCTCTCAGGAGATGAAGACTTC...GTGCTGACAGCGACCCTGCTCAGAGCACCAGGTTTCAGGGCACTGAAGCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR GCA 90 bp | CAGGATCTCAGAGTTCCCTACCGAAGCAGGAGCTATCAACACAGGGATGCACCGAGAAAAGGAGCCTCGTaGCTCCCAGCCTGGTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QDLRVPYRSRSYQHRDAPRKGAS*LPAWSR Trigger: ACGGGACCAGGCTGGGAGGCACGAGGCTCCTTTTCT...CGGTGCATCCCTGTGTTGATAGCTCCTGCTTCGGTAGGGAACTCTGAGATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTCTTCCCCAGCCTGGGTaGTCTTTGGAACAGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRDHPNKSGAAGAHSPECLPQPG*SLEQVQ Trigger: CTGCACCTGTTCCAAAGAGCACCCAGGCTGGGGAAG...ACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | GAAGGCGGCCAGCAACATCCCACCTGTTCCCCTTGGCCACAGCTCAGCATGGAGTGGTGGGGTGTGTCTTaGTGGTATCTGTGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGGQQHPTCSPWPQLSMEWWGVS*WYLCFS Trigger: AGAGAAGCACAGATACCACCAAGACACACCCCACCA...CTCCATGCTGAGCTGTGGCCAAGGGGAACAGGTGGGATGTTGCTGGCCGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | TACCGAAGCAGGAGCTATCAACACAGGGATGCACCGAGTCCTCCCAGCTCCGTCGCATGGGCTCAGCTGTaGAGTGAGACATGGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: YRSRSYQHRDAPSPPSSVAWAQL*SETWTH Trigger: GTGTGTCCATGTCTCACTCCACAGCTGAGCCCATGC...GACGGAGCTGGGAGGACTCGGTGCATCCCTGTGTTGATAGCTCCTGCTTCGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | GCAGCTGGAGCACACTCCCCAGAATGTGTACGCACTTCGGGAAGGCTTCAGTGCGGTACTCCATCAGCATaGGCTCAGCTGTGGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AAGAHSPECVRTSGRLQCGTPSA*AQLWSE Trigger: CTCACTCCACAGCTGAGCCCATGCTGATGGAGTACC...GCACTGAAGCCTTCCCGAAGTGCGTACACATTCTGGGGAGTGTGCTCCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR GCA 90 bp | TCCTTTTGCGCTTCTCTTCAATCCGGTGGCGATCATCTGTGTCTGGCAAGTACTTCTCGCCAGGAATACTaGCCGCTGAGCGCCCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SFCASLQSGGDHLCLASTSRQEY*PLSAPR Trigger: GCGAGGGGCGCTCAGCGGGCAGTATTCCTGGCGAGA...AGTACTTGCCAGACACAGATGATCGCCACCGGATTGAAGAGAAGCGCAAAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGGTCTGTGAACACTCCTGGGTCTGTGCTGTTGCCAAGCAAGGCCCCCAAGTGGTGGGGTGTGTCTTaGTGGTATCTGTGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARSVNTPGSVLLPSKAPKWWGVS*WYLCFS Trigger: AGAGAAGCACAGATACCACCAAGACACACCCCACCA...CTTGGGGGCCTTGCTTGGCAACAGCACAGACCCAGGAGTGTTCACAGACCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | GGATGCACCGAGTCCTCCCAGCTCCGTCTCCAGGAGGTTAATGCTCCTGCGAAATTGGTCTGGATTCGCTaGCTAATGGCTTGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCTESSQLRLQEVNAPAKLVWIR*LMACSR Trigger: CCTGGAGCAAGCCATTAGCCAGCGAATCCAGACCAA...TTTCGCAGGAGCATTAACCTCCTGGAGACGGAGCTGGGAGGACTCGGTGCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | GGATGCACCGAGTCCTCCCAGCTCCGTCTCCAGGAGGTTAATGCTCCTGCGAAAGAGTCCGGAACACAATaGCCACTTGCCGATGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GCTESSQLRLQEVNAPAKESGTQ*PLADAH Trigger: ATGTGCATCGGCAAGTGGCCATTGTGTTCCGGACTC...TTTCGCAGGAGCATTAACCTCCTGGAGACGGAGCTGGGAGGACTCGGTGCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | GATGCACCGAGTCCTCCCAGCTCCGTCTCCAGGAGGTTAATGCTCCTGCGAAAGGTGTCTGGCAAGTACTaGAACTCCATGGGCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: DAPSPPSSVSRRLMLLRKVSGKY*NSMGSL Trigger: CAGTGAGCCCATGGAGTTCCAGTACTTGCCAGACAC...CTTTCGCAGGAGCATTAACCTCCTGGAGACGGAGCTGGGAGGACTCGGTGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | CAGAATGTGTACGCACTTCGGGAAGGCTTCAGTGCCCTGAAACCTGGTGCTCTGGCCAAGGCCAGGGCCTaGTTTGAGATCTGCCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QNVYALREGFSALKPGALAKARA*FEICPD Trigger: ATCAGGGCAGATCTCAAACCAGGCCCTGGCCTTGGC...CAGAGCACCAGGTTTCAGGGCACTGAAGCCTTCCCGAAGTGCGTACACATTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | CAGAATGTGTACGCACTTCGGGAAGGCTTCAGTGCCCTGAAACCTGGTGCTCTGGAGCCAGAGGTACCATaGCTGAGGAAGGGACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QNVYALREGFSALKPGALEPEVP*LRKGPW Trigger: CCATGGTCCCTTCCTCAGCCATGGTACCTCTGGCTC...CAGAGCACCAGGTTTCAGGGCACTGAAGCCTTCCCGAAGTGCGTACACATTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | GGATGCACCGAGTCCTCCCAGCTCCGTCTCCAGGAGGTTAATGCTCCTGCGAAAGTCTGTGAACACTCCTaGGTCTGTGCTGTTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GCTESSQLRLQEVNAPAKVCEHS*VCAVAK Trigger: CTTGGCAACAGCACAGACCCAGGAGTGTTCACAGAC...TTTCGCAGGAGCATTAACCTCCTGGAGACGGAGCTGGGAGGACTCGGTGCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| 3UTR CAA 72 bp | CAGCACCACGTAGGAGCTGCTCTTGGGAGCACTGCTTaGGATCAAGGTGTACAGGAATCCGCGTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHHVGAALGSTA*DQGVQESAWRK Trigger: CTTCCTCCACGCGGATTCCTGTACACCTTGATCCAAAGCAGTGCTCCCAAGAGCAGCTCCTACGTGGTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| 3UTR CAA 72 bp | AGGCAGCTCCCAGAGTTCCGGTTTACTCGGCAGATCTaGAGCTCGGCAGTGTTGGGGGCCCGGTTATCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQLPEFRFTRQI*SSAVLGARLSK Trigger: TTTTGATAACCGGGCCCCCAACACTGCCGAGCTCAAGATCTGCCGAGTAAACCGGAACTCTGGGAGCTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTCCCAGCCTGGTCCCGTaGAATACACCTCAATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRDHPNKSGAAGAHSPECPSLVP*NTPQCL Trigger: AAGACATTGAGGTGTATTTCACGGGACCAGGCTGGG...ACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGTGCCCTGAAACCTGGTGCTCTGAGCAGGGTCGCTGTCAGCACCTTAGGACCCAGCCTGGTCCCGTaGAATACACCTCAATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSALKPGALSRVAVSTLGPSLVP*NTPQCL Trigger: AAGACATTGAGGTGTATTTCACGGGACCAGGCTGGG...TCCTAAGGTGCTGACAGCGACCCTGCTCAGAGCACCAGGTTTCAGGGCACTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTACCGAAGCAGGAGCTATCAACACAGGGATGCACCGAGTCCTCCCAGCTCTGGTTCAGGAGCTGCTaGAACTCTGAGTTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLPKQELSTQGCTESSQLWFRSC*NSELST Trigger: TGTGGACAACTCAGAGTTTCAGCAGCTCCTGAACCA...GAGCTGGGAGGACTCGGTGCATCCCTGTGTTGATAGCTCCTGCTTCGGTAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR GCA 90 bp | TACAGGAATCCGCGTGGAGGAAGACACTTGATAGTAAGGCTATATGGCCTAAGGTCTCGCCAGGAATACTaGCCGCTGAGCGCCCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YRNPRGGRHLIVRLYGLRSRQEY*PLSAPR Trigger: GCGAGGGGCGCTCAGCGGGCAGTATTCCTGGCGAGA...CCTTAGGCCATATAGCCTTACTATCAAGTGTCTTCCTCCACGCGGATTCCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR GCA 90 bp | GCCAGGTCTGTGAACACTCCTGGGTCTGTGCTGTTGCCAAGCAAGGCCCCCAAGTCTTGGTGGTATCTGTaGTTCTCTCGCCAGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: ARSVNTPGSVLLPSKAPKSWWYL*FSRQEY Trigger: GTATTCCTGGCGAGAGAAGCACAGATACCACCAAGA...CTTGGGGGCCTTGCTTGGCAACAGCACAGACCCAGGAGTGTTCACAGACCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
||
| CDS-3UTR GCA 90 bp | ATCTCAGAGTTCCCTACCGAAGCAGGAGCTATCAACACAGGGATGCACCGAGTCGATGGTGCTGAGGGATaGTGGGAAGGTGTAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISEFPTEAGAINTGMHRVDGAEG*WEGVGL Trigger: CAGCCCTACACCTTCCCAGCATCCCTCAGCACCATC...GACTCGGTGCATCCCTGTGTTGATAGCTCCTGCTTCGGTAGGGAACTCTGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGAGTTCCCTACCGAAGCAGGAGCTATCAACACAGGGATGCACCGAGTCATGAGGCCGGTGAGGTaGATCCTTGGTGACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISEFPTEAGAINTGMHRVMRPVR*ILGDQG Trigger: TCCCTGGTCACCAAGGATCCACCTCACCGGCCTCAT...GACTCGGTGCATCCCTGTGTTGATAGCTCCTGCTTCGGTAGGGAACTCTGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | GAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACCGCTTCTTCACACACTaGATCCCCAGGTTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EITQTSRGQLEHTPQNVYRFFTH*IPRFWK Trigger: CTTCCAGAACCTGGGGATCCAGTGTGTGAAGAAGCG...GTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | GGAGATGGAAGCAGGATCTCAGAGTTCCCTACCGAAGCAGGAGCTATCAACACATCCCGCACTGTCACCTaGAAGCAGAGGCGCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GDGSRISEFPTEAGAINTSRTVT*KQRRTA Trigger: TGCAGTGCGCCTCTGCTTCCAGGTGACAGTGCGGGA...TGTGTTGATAGCTCCTGCTTCGGTAGGGAACTCTGAGATCCTGCTTCCATCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | GAATCCGCGTGGAGGAAGACACTTGATAGTAAGGCTATATGGCCTAAGGCCATGGGTGCTGAGGGATGCTaGGAAGGTGTAGGGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ESAWRKTLDSKAIWPKAMGAEGC*EGVGLR Trigger: CCGCAGCCCTACACCTTCCCAGCATCCCTCAGCACC...CATGGCCTTAGGCCATATAGCCTTACTATCAAGTGTCTTCCTCCACGCGGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | GACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTTGGAACAGGTGCAGACAGGGACATGTTACAGCTGGCTTaGGGACAGAAGTTGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DSVPSPAWVLFGTGADRDMLQLA*GQKLSF Trigger: GAAACTCAACTTCTGTCCCCAAGCCAGCTGTAACAT...GTCCCTGTCTGCACCTGTTCCAAAGAGCACCCAGGCTGGGGAAGGCACGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| 3UTR CAA 72 bp | GATGCCAGGTCTGTGAACACTCCTGGGTCTGTGCTGTaGCCAAGCAAGGCCCCCAAGTCTTCATCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: DARSVNTPGSVL*PSKAPKSSSAS Trigger: TGATGCTGATGAAGACTTGGGGGCCTTGCTTGGCAACAGCACAGACCCAGGAGTGTTCACAGACCTGGCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
||
| CDS-3UTR TCA 90 bp | CAGGATCTCAGAGTTCCCTACCGAAGCAGGAGCTATCAACACAGGGATGCACCGGAGCTGCTGAAACTCTaGGTTGTCCACAGATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QDLRVPYRSRSYQHRDAPELLKL*VVHRCQ Trigger: CTGGCATCTGTGGACAACTCAGAGTTTCAGCAGCTC...CGGTGCATCCCTGTGTTGATAGCTCCTGCTTCGGTAGGGAACTCTGAGATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR GCA 90 bp | CGGGCAGCACCACGTAGGAGCTGCTCTTGGGAGCACTGCTTTGGATCAAGGTGTTCTTGGTGGTATCTGTaGTTCTCTCGCCAGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: RAAPRRSCSWEHCFGSRCSWWYL*FSRQEY Trigger: GTATTCCTGGCGAGAGAAGCACAGATACCACCAAGA...ACACCTTGATCCAAAGCAGTGCTCCCAAGAGCAGCTCCTACGTGGTGCTGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR GCA 90 bp | GCTGAGCCAGAGGTACCATGGCTGAGGAAGGGACCATGGTCTGGGCAAGGACTGTCAATGTCTTCTTTCTaGACCTTGTCGCACAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AEPEVPWLRKGPWSGQGLSMSSF*TLSHSK Trigger: CTTGCTGTGCGACAAGGTGCAGAAAGAAGACATTGA...CAGTCCTTGCCCAGACCATGGTCCCTTCCTCAGCCATGGTACCTCTGGCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGACACACCCTGGTTCAGGAGCTGCTGAAACTCTGAGTTGTCCACAGATGGAAGGCCGCCGTAGCTaGATGGAGACTCGAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TWTHPGSGAAETLSCPQMEGRRS*METRTG Trigger: TCCTGTTCGAGTCTCCATGCAGCTACGGCGGCCTTC...CATCTGTGGACAACTCAGAGTTTCAGCAGCTCCTGAACCAGGGTGTGTCCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| CDS-3UTR GCA 90 bp | GGAGATGGAAGCAGGATCTCAGAGTTCCCTACCGAAGCAGGAGCTATCAACACAACACTCCTGGGTCTGTaGTGTTGCCAAGCAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GDGSRISEFPTEAGAINTTLLGL*CCQARP Trigger: GGGCCTTGCTTGGCAACAGCACAGACCCAGGAGTGT...TGTGTTGATAGCTCCTGCTTCGGTAGGGAACTCTGAGATCCTGCTTCCATCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | CTCAGCTGTGGAGTGAGACATGGACACACCCTGGTTCAGGAGCTGCTGAAACTCATGGATACTGCGGTCTaGGCAGAGGTCAGCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LSCGVRHGHTLVQELLKLMDTAV*AEVSLI Trigger: TATGAGGCTGACCTCTGCCCAGACCGCAGTATCCAT...GAGTTTCAGCAGCTCCTGAACCAGGGTGTGTCCATGTCTCACTCCACAGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | CAGGATCTCAGAGTTCCCTACCGAAGCAGGAGCTATCAACACAGGGATGCACCGAGGTTCTGGAAGCTATaGATACTGCGGTCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QDLRVPYRSRSYQHRDAPRFWKL*ILRSGQ Trigger: CTGCCCAGACCGCAGTATCCATAGCTTCCAGAACCT...CGGTGCATCCCTGTGTTGATAGCTCCTGCTTCGGTAGGGAACTCTGAGATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | TCTGGGAACCAAAATCTGACCAGGCCTGTAGGGTCCACTTCCAAGGGCCACAGTAGGTTCTGGAAGCTATaGATACTGCGGTCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGNQNLTRPVGSTSKGHSRFWKL*ILRSGQ Trigger: CTGCCCAGACCGCAGTATCCATAGCTTCCAGAACCT...ACTGTGGCCCTTGGAAGTGGACCCTACAGGCCTGGTCAGATTTTGGTTCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTTGCCAAGCAAGGCCCCCAAGTCTTCATCAGCATCAAACTGCAGGTGCAGTGGATCCCCAGGTTCTaGAAGCTATGGATACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AVAKQGPQVFISIKLQVQWIPRF*KLWILR Trigger: CCGCAGTATCCATAGCTTCCAGAACCTGGGGATCCA...CTGCACCTGCAGTTTGATGCTGATGAAGACTTGGGGGCCTTGCTTGGCAACAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTTGCCAAGCAAGGCCCCCAAGTCTTCATCAGCATCAAACTGCAGGTGCAGCGCTTCTTCACACACTaGATCCCCAGGTTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVAKQGPQVFISIKLQVQRFFTH*IPRFWK Trigger: CTTCCAGAACCTGGGGATCCAGTGTGTGAAGAAGCG...CTGCACCTGCAGTTTGATGCTGATGAAGACTTGGGGGCCTTGCTTGGCAACAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGAACCAAAATCTGACCAGGCCTGTAGGGTCCACTTCCAAGGGCCACAGTGAGTCCGGAACACAATaGCCACTTGCCGATGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SGNQNLTRPVGSTSKGHSESGTQ*PLADAH Trigger: ATGTGCATCGGCAAGTGGCCATTGTGTTCCGGACTC...ACTGTGGCCCTTGGAAGTGGACCCTACAGGCCTGGTCAGATTTTGGTTCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
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| CDS-3UTR CCA 90 bp | AGAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTAGTGTCTGGCAAGTACTaGAACTCCATGGGCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RDHPNKSGAAGAHSPECVVSGKY*NSMGSL Trigger: CAGTGAGCCCATGGAGTTCCAGTACTTGCCAGACAC...TACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| 3UTR CAA 72 bp | TTCCGGTTTACTCGGCAGATCTTGAGCTCGGCAGTGTaGGGGGCCCGGTTATCAAAAATCGGATGTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRFTRQILSSAV*GARLSKIGCER Trigger: CCTCTCACATCCGATTTTTGATAACCGGGCCCCCAACACTGCCGAGCTCAAGATCTGCCGAGTAAACCGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| CDS-3UTR TCA 90 bp | TCCAATAGCTTTTTCAGTAAAGGCTGTCTTGTGGCTGAGCATCTAGCCTGCCCTACTCCATGGGCTCACTaGGCTCGCGATCAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SNSFFSKGCLVAEHLACPTPWAH*ARDQKA Trigger: GGCCTTCTGATCGCGAGCTCAGTGAGCCCATGGAGT...AGGGCAGGCTAGATGCTCAGCCACAAGACAGCCTTTACTGAAAAAGCTATTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| CDS-3UTR GCA 90 bp | CACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGCACTTCAATGTCTTCTTTCTaGACCTTGTCGCACAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HPNKSGAAGAHSPECVRTSMSSF*TLSHSK Trigger: CTTGCTGTGCGACAAGGTGCAGAAAGAAGACATTGA...AGTGCGTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
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| CDS-3UTR CCA 90 bp | TTCAATCCGGTGGCGATCATCTGTGTCTGGCAAGTACTGGAACTCCATGGGCTCTGGGGTGTGTCTTGGTaGTATCTGTGCTTCTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FNPVAIICVWQVLELHGLWGVSW*YLCFSR Trigger: GCGAGAGAAGCACAGATACCACCAAGACACACCCCA...GAGCCCATGGAGTTCCAGTACTTGCCAGACACAGATGATCGCCACCGGATTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| CDS-3UTR CCA 90 bp | TCCACTTCCAAGGGCCACAGTGAGGTGTTCCCTAGCTACTGCGGTCATAAAGCTTGGGGTGTGTCTTGGTaGTATCTGTGCTTCTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: STSKGHSEVFPSYCGHKAWGVSW*YLCFSR Trigger: GCGAGAGAAGCACAGATACCACCAAGACACACCCCA...AGCTTTATGACCGCAGTAGCTAGGGAACACCTCACTGTGGCCCTTGGAAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
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| CDS-3UTR CCA 90 bp | TGGTGTCGGGCAGCACCACGTAGGAGCTGCTCTTGGGAGCACTGCTTTGGATCAGATTCGAACTGTTCCTaGTCCTGTGTAGCCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WCRAAPRRSCSWEHCFGSDSNCS*SCVAID Trigger: ATCAATGGCTACACAGGACCAGGAACAGTTCGAATC...TGATCCAAAGCAGTGCTCCCAAGAGCAGCTCCTACGTGGTGCTGCCCGACACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| CDS-3UTR CCA 90 bp | ATCTCAGAGTTCCCTACCGAAGCAGGAGCTATCAACACAGGGATGCACCGAGTCATGGATACTGCGGTCTaGGCAGAGGTCAGCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: ISEFPTEAGAINTGMHRVMDTAV*AEVSLI Trigger: TATGAGGCTGACCTCTGCCCAGACCGCAGTATCCAT...GACTCGGTGCATCCCTGTGTTGATAGCTCCTGCTTCGGTAGGGAACTCTGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | CTGTGGAGTGAGACATGGACACACCCTGGTTCAGGAGCTGCTGAAACTCTGAGTATGGATACTGCGGTCTaGGCAGAGGTCAGCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LWSETWTHPGSGAAETLSMDTAV*AEVSLI Trigger: TATGAGGCTGACCTCTGCCCAGACCGCAGTATCCAT...ACTCAGAGTTTCAGCAGCTCCTGAACCAGGGTGTGTCCATGTCTCACTCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGAGTTCCCTACCGAAGCAGGAGCTATCAACACAGGGATGCACCGAGTCTGGATCCCCAGGTTCTaGAAGCTATGGATACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ISEFPTEAGAINTGMHRVWIPRF*KLWILR Trigger: CCGCAGTATCCATAGCTTCCAGAACCTGGGGATCCA...GACTCGGTGCATCCCTGTGTTGATAGCTCCTGCTTCGGTAGGGAACTCTGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CCA 90 bp | TCCACTTCCAAGGGCCACAGTGAGGTGTTCCCTAGCTACTGCGGTCATAAAGCTTTGGTCTGGATTCGCTaGCTAATGGCTTGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: STSKGHSEVFPSYCGHKALVWIR*LMACSR Trigger: CCTGGAGCAAGCCATTAGCCAGCGAATCCAGACCAA...AGCTTTATGACCGCAGTAGCTAGGGAACACCTCACTGTGGCCCTTGGAAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| CDS-3UTR CCA 90 bp | TCCAATAGCTTTTTCAGTAAAGGCTGTCTTGTGGCTGAGCATCTAGCCTGCCCTCTGAGGAAGGGACCATaGTCTGGGCAAGGACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SNSFFSKGCLVAEHLACPLRKGP*SGQGLG Trigger: CCCCAGTCCTTGCCCAGACCATGGTCCCTTCCTCAG...AGGGCAGGCTAGATGCTCAGCCACAAGACAGCCTTTACTGAAAAAGCTATTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| CDS-3UTR GCA 90 bp | TACAGGAATCCGCGTGGAGGAAGACACTTGATAGTAAGGCTATATGGCCTAAGGGAAGGCCGCCGTAGCTaGATGGAGACTCGAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YRNPRGGRHLIVRLYGLREGRRS*METRTG Trigger: TCCTGTTCGAGTCTCCATGCAGCTACGGCGGCCTTC...CCTTAGGCCATATAGCCTTACTATCAAGTGTCTTCCTCCACGCGGATTCCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| CDS-3UTR CCA 90 bp | GGAGATGGAAGCAGGATCTCAGAGTTCCCTACCGAAGCAGGAGCTATCAACACATGGGGTGTGTCTTGGTaGTATCTGTGCTTCTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GDGSRISEFPTEAGAINTWGVSW*YLCFSR Trigger: GCGAGAGAAGCACAGATACCACCAAGACACACCCCA...TGTGTTGATAGCTCCTGCTTCGGTAGGGAACTCTGAGATCCTGCTTCCATCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| CDS-3UTR CCA 90 bp | TTCAGTGCCCTGAAACCTGGTGCTCTGAGCAGGGTCGCTGTCAGCACCTTAGGAGATTCGAACTGTTCCTaGTCCTGTGTAGCCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSALKPGALSRVAVSTLGDSNCS*SCVAID Trigger: ATCAATGGCTACACAGGACCAGGAACAGTTCGAATC...TCCTAAGGTGCTGACAGCGACCCTGCTCAGAGCACCAGGTTTCAGGGCACTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
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| CDS-3UTR CCA 90 bp | TGGTGTCGGGCAGCACCACGTAGGAGCTGCTCTTGGGAGCACTGCTTTGGATCACTGATGGTAACAGCATaGGGGAAAACTCATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WCRAAPRRSCSWEHCFGSLMVTA*GKTHQS Trigger: ACTTTGATGAGTTTTCCCCCATGCTGTTACCATCAG...TGATCCAAAGCAGTGCTCCCAAGAGCAGCTCCTACGTGGTGCTGCCCGACACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| CDS-3UTR CCA 90 bp | TACAGGAATCCGCGTGGAGGAAGACACTTGATAGTAAGGCTATATGGCCTAAGGGTGCCTTCCCCAGCCTaGGTGCTCTTTGGAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YRNPRGGRHLIVRLYGLRVPSPA*VLFGTG Trigger: ACCTGTTCCAAAGAGCACCCAGGCTGGGGAAGGCAC...CCTTAGGCCATATAGCCTTACTATCAAGTGTCTTCCTCCACGCGGATTCCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| CDS-3UTR CCA 90 bp | CTCAGCTGTGGAGTGAGACATGGACACACCCTGGTTCAGGAGCTGCTGAAACTCGATTCGAACTGTTCCTaGTCCTGTGTAGCCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSCGVRHGHTLVQELLKLDSNCS*SCVAID Trigger: ATCAATGGCTACACAGGACCAGGAACAGTTCGAATC...GAGTTTCAGCAGCTCCTGAACCAGGGTGTGTCCATGTCTCACTCCACAGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| 3UTR CAA 72 bp | ATACGCCGGGTTGGAGGCCGGGGTTCAGTTGGTCCATaGAAAGGACTCTTCTTCATGATACTCTTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IRRVGGRGSVGP*KGLFFMILLKV Trigger: GACCTTCAAGAGTATCATGAAGAAGAGTCCTTTCAATGGACCAACTGAACCCCGGCCTCCAACCCGGCGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| CDS-3UTR TCA 90 bp | TCCAATAGCTTTTTCAGTAAAGGCTGTCTTGTGGCTGAGCATCTAGCCTGCCCTGCTCTGAGGGAAAGATaGGGGGAAACAGATCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SNSFFSKGCLVAEHLACPALRER*GETDRP Trigger: TGGACGATCTGTTTCCCCTCATCTTTCCCTCAGAGC...AGGGCAGGCTAGATGCTCAGCCACAAGACAGCCTTTACTGAAAAAGCTATTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| CDS-3UTR GCA 90 bp | TCCAATAGCTTTTTCAGTAAAGGCTGTCTTGTGGCTGAGCATCTAGCCTGCCCTTCATCAGCATCAAACTaGAGGTGCAGCAGGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNSFFSKGCLVAEHLACPSSASN*RCSRAS Trigger: GGAAGCCCTGCTGCACCTGCAGTTTGATGCTGATGA...AGGGCAGGCTAGATGCTCAGCCACAAGACAGCCTTTACTGAAAAAGCTATTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| CDS-3UTR CCA 90 bp | TCCAATAGCTTTTTCAGTAAAGGCTGTCTTGTGGCTGAGCATCTAGCCTGCCCTCTGTGGAGTGAGACATaGACACACCCTGGTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNSFFSKGCLVAEHLACPLWSET*THPGSG Trigger: TCCTGAACCAGGGTGTGTCCATGTCTCACTCCACAG...AGGGCAGGCTAGATGCTCAGCCACAAGACAGCCTTTACTGAAAAAGCTATTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| CDS GCA 90 bp | CCTGCCTGCTGGGTCCCGCACTGTCACCTGGAAGCAGAGGCGCACTaGATTCAAGTCATAGTCCCCGCGCTGCTCCTCTATAGGAACGTG | + |
|
Preference number: 5 (lower is better) Translates to: PACWVPHCHLEAEAH*IQVIVPALLLYRNV Trigger: CACGTTCCTATAGAGGAGCAGCGCGGGGACTATGACTTGAATGCAGTGCGCCTCTGCTTCCAGGTGACAGTGCGGGACCCAGCAGGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
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| CDS-3UTR CAA 90 bp | GATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGCCCTGGGTCTGTGCTGTaGCCAAGCAAGGCCCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DHPNKSGAAGAHSPECVRPGSVL*PSKAPK Trigger: CTTGGGGGCCTTGCTTGGCAACAGCACAGACCCAGG...GCGTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| CDS-3UTR CAA 90 bp | GACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTTGGAACAGGTGCAGACAGGGACGAATCGCATGCCCCGTaGCTTCGGCTGTTCGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: DSVPSPAWVLFGTGADRDESHAP*LRLFDD Trigger: ATCATCGAACAGCCGAAGCAACGGGGCATGCGATTC...GTCCCTGTCTGCACCTGTTCCAAAGAGCACCCAGGCTGGGGAAGGCACGCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| CDS-3UTR CAA 90 bp | GACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTTGGAACAGGTGCAGACAGGGACCCGATGCACATCAGCTaGAGAAAAGGAGCCTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DSVPSPAWVLFGTGADRDPMHIS*RKGASC Trigger: GCACGAGGCTCCTTTTCTCAAGCTGATGTGCATCGG...GTCCCTGTCTGCACCTGTTCCAAAGAGCACCCAGGCTGGGGAAGGCACGCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
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| CDS-3UTR CAA 90 bp | TGGTGTCGGGCAGCACCACGTAGGAGCTGCTCTTGGGAGCACTGCTTTGGATCAGGCTGCGGGGCTGGCTaGGGGACAGAAGTTGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: WCRAAPRRSCSWEHCFGSGCGAG*GTEVEF Trigger: AAACTCAACTTCTGTCCCCAAGCCAGCCCCGCAGCC...TGATCCAAAGCAGTGCTCCCAAGAGCAGCTCCTACGTGGTGCTGCCCGACACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| CDS-3UTR CAA 90 bp | CGGGCAGCACCACGTAGGAGCTGCTCTTGGGAGCACTGCTTTGGATCAAGGTGTCAGCCTGGGTGCTCTTaGGAACAGGTGCAGACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RAAPRRSCSWEHCFGSRCQPGCS*EQVQTG Trigger: CCCTGTCTGCACCTGTTCCAAAGAGCACCCAGGCTG...ACACCTTGATCCAAAGCAGTGCTCCCAAGAGCAGCTCCTACGTGGTGCTGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| CDS CCA 90 bp | CCGGCAGTCCTTCCCCACAAGTTCATGTGGATGAGGCCGGTGAGGTaGATCCTTGGTGACCAGGGAGATTCGAACTGTTCCTGGTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PAVLPHKFMWMRPVR*ILGDQGDSNCSWSC Trigger: ACAGGACCAGGAACAGTTCGAATCTCCCTGGTCACCAAGGATCCACCTCACCGGCCTCATCCACATGAACTTGTGGGGAAGGACTGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025867.6 ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| CDS-3UTR CAA 90 bp | TCCCTACCGAAGCAGGAGCTATCAACACAGGGATGCACCGAGTCCTCCCAGCTCGAATCGCATGCCCCGTaGCTTCGGCTGTTCGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLPKQELSTQGCTESSQLESHAP*LRLFDD Trigger: ATCATCGAACAGCCGAAGCAACGGGGCATGCGATTC...GAGCTGGGAGGACTCGGTGCATCCCTGTGTTGATAGCTCCTGCTTCGGTAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
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| CDS-3UTR CAA 90 bp | TGGGGTCGGCGTACGGAGGAGTCCGGAACACAATGGCCACTTGCCGATGCACATATGGTGGGGTGTGTCTaGGTGGTATCTGTGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WGRRTEESGTQWPLADAHMVGCV*VVSVLL Trigger: GAGAAGCACAGATACCACCAAGACACACCCCACCAT...ATGTGCATCGGCAAGTGGCCATTGTGTTCCGGACTCCTCCGTACGCCGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| CDS-3UTR CAA 90 bp | CCAGAGAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTTGAGCTCGGCAGTGTaGGGGGCCCGGTTATCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PERSPKQVGGSWSTLPRMLSSAV*GARLSK Trigger: TTTTGATAACCGGGCCCCCAACACTGCCGAGCTCAA...CATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTCTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
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| CDS-3UTR CAA 90 bp | AGGCCTGTAGGGTCCACTTCCAAGGGCCACAGTGAGGTGTTCCCTAGCTACTGCTTGAGCTCGGCAGTGTaGGGGGCCCGGTTATCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RPVGSTSKGHSEVFPSYCLSSAV*GARLSK Trigger: TTTTGATAACCGGGCCCCCAACACTGCCGAGCTCAA...GCAGTAGCTAGGGAACACCTCACTGTGGCCCTTGGAAGTGGACCCTACAGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
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| CDS-3UTR CAA 90 bp | CCAGAGAGATCACCCAAACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGCCGATGCACATCAGCTaGAGAAAAGGAGCCTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PERSPKQVGGSWSTLPRMPMHIS*RKGASC Trigger: GCACGAGGCTCCTTTTCTCAAGCTGATGTGCATCGG...CATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTTTGGGTGATCTCTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
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| CDS-3UTR CAA 90 bp | AACAAGTCGGGGGCAGCTGGAGCACACTCCCCAGAATGTGTACGCACTTCGGGAATGGTGGGGTGTGTCTaGGTGGTATCTGTGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: NKSGAAGAHSPECVRTSGMVGCV*VVSVLL Trigger: GAGAAGCACAGATACCACCAAGACACACCCCACCAT...TCCCGAAGTGCGTACACATTCTGGGGAGTGTGCTCCAGCTGCCCCCGACTTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
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| CDS CCA 90 bp | ATTCGCTGGCTAATGGCTTGCTCCAGGTCTCGCTTCTTCACACACTaGATCCCCAGGTTCTGGAAGCTATGGATACTGCGGTCTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IRWLMACSRSRFFTH*IPRFWKLWILRSGQ Trigger: CTGCCCAGACCGCAGTATCCATAGCTTCCAGAACCTGGGGATCCAGTGTGTGAAGAAGCGAGACCTGGAGCAAGCCATTAGCCAGCGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
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| CDS-3UTR CAA 90 bp | CAGGATCTCAGAGTTCCCTACCGAAGCAGGAGCTATCAACACAGGGATGCACCGTTTACTCGGCAGATCTaGAGCTCGGCAGTGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QDLRVPYRSRSYQHRDAPFTRQI*SSAVLG Trigger: CCCCAACACTGCCGAGCTCAAGATCTGCCGAGTAAA...CGGTGCATCCCTGTGTTGATAGCTCCTGCTTCGGTAGGGAACTCTGAGATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CAA 90 bp | CAGAATGTGTACGCACTTCGGGAAGGCTTCAGTGCCCTGAAACCTGGTGCTCTGTTTACTCGGCAGATCTaGAGCTCGGCAGTGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QNVYALREGFSALKPGALFTRQI*SSAVLG Trigger: CCCCAACACTGCCGAGCTCAAGATCTGCCGAGTAAA...CAGAGCACCAGGTTTCAGGGCACTGAAGCCTTCCCGAAGTGCGTACACATTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGGTCTGTGAACACTCCTGGGTCTGTGCTGTTGCCAAGCAAGGCCCCCAAGCATGTTACAGCTGGCTaGGGGACAGAAGTTGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ARSVNTPGSVLLPSKAPKHVTAG*GTEVEF Trigger: AAACTCAACTTCTGTCCCCAAGCCAGCTGTAACATG...CTTGGGGGCCTTGCTTGGCAACAGCACAGACCCAGGAGTGTTCACAGACCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCGTGCCTTCCCCAGCCTGGGTGCTCTTTGGAACAGGTGCAGACAGGGACTGGTTCAGTTGGTCCATaGAAAGGACTCTTCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: TACLPQPGCSLEQVQTGTGSVGP*KGLFFM Trigger: CATGAAGAAGAGTCCTTTCAATGGACCAACTGAACC...AGTCCCTGTCTGCACCTGTTCCAAAGAGCACCCAGGCTGGGGAAGGCACGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238000.2 |
||
| CDS-3UTR CAA 90 bp | CGGGTTGGAGGCCGGGGTTCAGTTGGTCCATTGAAAGGACTCTTCTTCATGATAGAATCGCATGCCCCGTaGCTTCGGCTGTTCGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: RVGGRGSVGPLKGLFFMIESHAP*LRLFDD Trigger: ATCATCGAACAGCCGAAGCAACGGGGCATGCGATTC...TATCATGAAGAAGAGTCCTTTCAATGGACCAACTGAACCCCGGCCTCCAACCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGGAGCACACTCCCCAGAATGTGTACGCACTTCGGGAAGGCTTCAGTGCGAAAACTCATCAAAGTaGATGGTGCTGAGGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAGAHSPECVRTSGRLQCENSSK*MVLRDA Trigger: AGCATCCCTCAGCACCATCAACTTTGATGAGTTTTC...GCACTGAAGCCTTCCCGAAGTGCGTACACATTCTGGGGAGTGTGCTCCAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025867.6 |
||
| CDS-3UTR CAA 90 bp | CAGAATGTGTACGCACTTCGGGAAGGCTTCAGTGCCCTGAAACCTGGTGCTCTGGGTTCAGTTGGTCCATaGAAAGGACTCTTCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: QNVYALREGFSALKPGALGSVGP*KGLFFM Trigger: CATGAAGAAGAGTCCTTTCAATGGACCAACTGAACC...CAGAGCACCAGGTTTCAGGGCACTGAAGCCTTCCCGAAGTGCGTACACATTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
||
| CDS TCA 72 bp | AGCGGAATCGCATGCCCCGTTGCTTCGGCTGTTCGATaGTCTCCACATAAGGCCCAGAAGCCTGGGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGIACPVASAVR*SPHKAQKPGLA Trigger: AGCCAGCCCAGGCTTCTGGGCCTTATGTGGAGATCATCGAACAGCCGAAGCAACGGGGCATGCGATTCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025867.6 ENSMUST00000237838.2 ENSMUST00000237863.2 ENSMUST00000238000.2 |
||
| CDS GCA 72 bp | TGGGTCCCGCACTGTCACCTGGAAGCAGAGGCGCACTaGATTCAAGTCATAGTCCCCGCGCTGCTCCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: WVPHCHLEAEAH*IQVIVPALLLY Trigger: ATAGAGGAGCAGCGCGGGGACTATGACTTGAATGCAGTGCGCCTCTGCTTCCAGGTGACAGTGCGGGACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
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| CDS CCA 72 bp | GTAGCCATCCCGGCAGTCCTTCCCCACAAGTTCATGTaGATGAGGCCGGTGAGGTGGATCCTTGGTGACCAG | + |
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Preference number: 6 (lower is better) Translates to: VAIPAVLPHKFM*MRPVRWILGDQ Trigger: CTGGTCACCAAGGATCCACCTCACCGGCCTCATCCACATGAACTTGTGGGGAAGGACTGCCGGGATGGCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025867.6 ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| CDS TCA 72 bp | GGTATCTGTGCTTCTCTCGCCAGGAATACTGCCCGCTaGGCGCCCCTCGCATTTATAGCGGAATCGCATGCC | + |
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Preference number: 6 (lower is better) Translates to: GICASLARNTAR*APLAFIAESHA Trigger: GGCATGCGATTCCGCTATAAATGCGAGGGGCGCTCAGCGGGCAGTATTCCTGGCGAGAGAAGCACAGATACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025867.6 ENSMUST00000237838.2 ENSMUST00000237863.2 ENSMUST00000238000.2 |
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| CDS CCA 72 bp | GATCCCCAGGTTCTGGAAGCTATGGATACTGCGGTCTaGGCAGAGGTCAGCCTCATAGTAGCCATCCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: DPQVLEAMDTAV*AEVSLIVAIPA Trigger: TGCCGGGATGGCTACTATGAGGCTGACCTCTGCCCAGACCGCAGTATCCATAGCTTCCAGAACCTGGGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
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| CDS CAA 72 bp | GCGCCCCTCGCATTTATAGCGGAATCGCATGCCCCGTaGCTTCGGCTGTTCGATGATCTCCACATAAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: APLAFIAESHAP*LRLFDDLHIRP Trigger: GGGCCTTATGTGGAGATCATCGAACAGCCGAAGCAACGGGGCATGCGATTCCGCTATAAATGCGAGGGGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025867.6 ENSMUST00000237838.2 ENSMUST00000237863.2 ENSMUST00000238000.2 |
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| CDS CCA 72 bp | CGCTGCTCCTCTATAGGAACTATGGATACTGCGGTCTaGGCAGAGGTCAGCCTCATAGTAGCCATCCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: RCSSIGTMDTAV*AEVSLIVAIPA Trigger: TGCCGGGATGGCTACTATGAGGCTGACCTCTGCCCAGACCGCAGTATCCATAGTTCCTATAGAGGAGCAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237838.2 |
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| CDS TCA 72 bp | GTTCATGTGGATGAGGCCGGTGAGGTGGATCCTTGGTaGCCAGGGAGATTCGAACTGTTCCTGGTCCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: VHVDEAGEVDPW*PGRFELFLVLC Trigger: ACACAGGACCAGGAACAGTTCGAATCTCCCTGGTCACCAAGGATCCACCTCACCGGCCTCATCCACATGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025867.6 ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| CDS CCA 72 bp | CTTCCCCACAAGTTCATGTGGATGAGGCCGGTGAGGTaGATCCTTGGTGACCAGGGAGATTCGAACTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: LPHKFMWMRPVR*ILGDQGDSNCS Trigger: GGAACAGTTCGAATCTCCCTGGTCACCAAGGATCCACCTCACCGGCCTCATCCACATGAACTTGTGGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025867.6 ENSMUST00000237838.2 ENSMUST00000238000.2 |
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| CDS GCA 72 bp | GGGTTATTGTTGGTCTGGATTCGCTGGCTAATGGCTTaGTCCAGGTCTCGCTTCTTCACACACTGGATCCCC | + |
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Preference number: 6 (lower is better) Translates to: GLLLVWIRWLMA*SRSRFFTHWIP Trigger: GGGGATCCAGTGTGTGAAGAAGCGAGACCTGGAGCAAGCCATTAGCCAGCGAATCCAGACCAACAATAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025867.6 ENSMUST00000238000.2 |
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| CDS CCA 72 bp | TGGATCCTTGGTGACCAGGGAGATTCGAACTGTTCCTaGTCCTGTGTAGCCATTGATCTTGATGGTGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: WILGDQGDSNCS*SCVAIDLDGGV Trigger: CACCCCACCATCAAGATCAATGGCTACACAGGACCAGGAACAGTTCGAATCTCCCTGGTCACCAAGGATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025867.6 ENSMUST00000237838.2 ENSMUST00000238000.2 |
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